IVF0010811 (gene) Melon (IVF77) v1

Overview
NameIVF0010811
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionKrueppel-like factor
Locationtig00195367: 268938 .. 271150 (-)
RNA-Seq ExpressionIVF0010811
SyntenyIVF0010811
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AACAAAATGCACATAGGTTATGCTCCCCCCGCGCCCCATCATAGCTTTGATTTAAACCCTATTTCACCACCACCCATCCCCGCCCTCTCACTACCGGACACTGCAGCCCTTTCCGGTGTACGCCGCTGCCGCTGCCGCTCCAGAGCATATATTTTTCTATTTCATGTACCTGCCTCGAACTGGTACGATTGAAGTTTTTGTTGATTTTCAGTTCATTTATATGATTTATGCTATCTGGATGTTTACCATTCAACTCTATTTTTAGTTTTTGCAATCGTCCCTCTTCCTCGACTTCTTTGATTTGCGTTATCTCATCGACATTTTTTTCCTACTTTTCTTAGCTATCATTTACACGATGTTTTGGTTTACGCAATGATTTGATTTAACTATAAATTTTTGTTCTGCCGTATAATCGGACTTCGATTGGAGAAAGTTCGCAAACATTAGGGTTAAATGCTAAAGACGTTTAAGCATCTCAGCTGAAAAATGGGCTTAAATGCTTAGCGAAAAAACTCGTGATTGCCTTTTCATCCTCGCTTTACTTTTCCAGTATTATTTTTCGATTGGTGCATTGTTAGTTTTAGTAATATACTTAACCTTCTTCGCTTTTGCTTAGACGATAAACCTTATCAATGCTTAAGCTAAGATAGTCTGTAATAAATTTATAAGATCTTTTCGTTGGACTTTTTAGTTGGGAAGAAACAATCGAATTTTTAGGAGTAGGTGCTTTTTGAGTTGGGTGCATCTCACCTTTCTATGGCTCTATTTCGATGAGGATTGTCGAACTGTAGTTATCTTCTCTTTGAGCTAGTTTAAAGTTTTTCTCATAATTCGATTCATTTAGACTAGCTGAGGCTTCCGTATCATTCTTCTTTACATAAGTCATACTTTAGCGAATCGGGGAAAAAAGTAATTTGAACATTTTATGTGTTGTTTGGATTTGGAGGATTTAAAACGAGGACATGAGTTCACTTTCCTAATTGCATTTGGAACCAAACTGGCTAGATCACCACAATTAAATCTTCTTGTTTGTATAGCTATGAGAAATGAAAAGAAAGCGAGACATTGTACCCGAGAACTTTTATTAATAAGTCAAATATCATTTAATAAAAATGAAATCAACTTATTGAATTAAAACTCGAATGATCTACATTGTCAAAAAGAAAGAAAAAACTGACAAATTCTAAAATTTCAGAACAATTATTTTACAATTATATCTTTATAACCATATATAAACTAAACAATTGTTTGTAAATTTATATATCCTTTCACATCTGCTGGTTCCTAACAGAGAGTCATTTTTGTTTTAGGTTGAAGGGCGTGAGAGTTGAGTTAGAAGCAACCTAGAGATAGCTATGGGAGTAGAGCAAAACGACCCTTTGAAGGGAGTAGAGCAAAAAGACCCTTTCAAGGGAGTAGACTGGAAAGCTGTGGGTGGGGATATGCAGAAAGATCCCAGCTCTACAAACATTATAAAGAAAAGGCGTCCAACAAAAATTAGGCAAATCCCAGATTATTATTTTCTTCCTAGAAGACCCCTTCCTTATGTCATGGCATTCTATGGGGCCTGTATTGCTGGTGGTATCGGTGCTGGTATGCTGGTGGAGATGTGGATAAATGATAAAATTAAAAGTAAGTTCTGAATATAGATCTTTACATATTCAAAATCTTGTTGTAAATTGATTAATGCTCGATTTCACACTTATACACACAGTTTTAATAACCATGAAATTTTATTTTAAAAGAGTAGAAACATGTTTAGTACTGATTTTGAATACTGACAAAGGGTATTTTTAGCCAGTTTAAGCTATAAATCTTCATGCTCCTGGAAGTATCTTTTCTGACATCTCTCTGTTTTTCTTTTTAATCTACATCTATGCAAGATAAGTCAGTGCGATTGATTATTGATTTTCCTTTCTGATGTGTTCTTACAGAGGATGGAGGTGTCATCTGGGAGTTTGACAAGTAGAGTACAAGAGTAGTTGAAGTTGGAACAAGATCGTCGTGTTGCTGGGTTTTGTTTTATTGTTAATCTTAGTTATGGAACATGTAATGTAAGTGAACATCTTTTTAATGCCTCAATGAAGTTGTACAAAAATTGGAAGCAATAATTGTAAGTTTGTTTTTTGTTTTTGTTTTTCTTTTTTAAAGCGATAAATAACCTCCAATTCAGTTATTGGCAGTTTGTTTCTCTAATTATTGATCAAAAGCAC

mRNA sequence

AACAAAATGCACATAGGTTATGCTCCCCCCGCGCCCCATCATAGCTTTGATTTAAACCCTATTTCACCACCACCCATCCCCGCCCTCTCACTACCGGACACTGCAGCCCTTTCCGGTGTACGCCGCTGCCGCTGCCGCTCCAGAGCATATATTTTTCTATTTCATGTACCTGCCTCGAACTGGTTGAAGGGCGTGAGAGTTGAGTTAGAAGCAACCTAGAGATAGCTATGGGAGTAGAGCAAAACGACCCTTTGAAGGGAGTAGAGCAAAAAGACCCTTTCAAGGGAGTAGACTGGAAAGCTGTGGGTGGGGATATGCAGAAAGATCCCAGCTCTACAAACATTATAAAGAAAAGGCGTCCAACAAAAATTAGGCAAATCCCAGATTATTATTTTCTTCCTAGAAGACCCCTTCCTTATGTCATGGCATTCTATGGGGCCTGTATTGCTGGTGGTATCGGTGCTGGTATGCTGGTGGAGATGTGGATAAATGATAAAATTAAAAAGGATGGAGGTGTCATCTGGGAGTTTGACAAGTAGAGTACAAGAGTAGTTGAAGTTGGAACAAGATCGTCGTGTTGCTGGGTTTTGTTTTATTGTTAATCTTAGTTATGGAACATGTAATGTAAGTGAACATCTTTTTAATGCCTCAATGAAGTTGTACAAAAATTGGAAGCAATAATTGTAAGTTTGTTTTTTGTTTTTGTTTTTCTTTTTTAAAGCGATAAATAACCTCCAATTCAGTTATTGGCAGTTTGTTTCTCTAATTATTGATCAAAAGCAC

Coding sequence (CDS)

ATGGGAGTAGAGCAAAACGACCCTTTGAAGGGAGTAGAGCAAAAAGACCCTTTCAAGGGAGTAGACTGGAAAGCTGTGGGTGGGGATATGCAGAAAGATCCCAGCTCTACAAACATTATAAAGAAAAGGCGTCCAACAAAAATTAGGCAAATCCCAGATTATTATTTTCTTCCTAGAAGACCCCTTCCTTATGTCATGGCATTCTATGGGGCCTGTATTGCTGGTGGTATCGGTGCTGGTATGCTGGTGGAGATGTGGATAAATGATAAAATTAAAAAGGATGGAGGTGTCATCTGGGAGTTTGACAAGTAG

Protein sequence

MGVEQNDPLKGVEQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRPLPYVMAFYGACIAGGIGAGMLVEMWINDKIKKDGGVIWEFDK
Homology
BLAST of IVF0010811 vs. ExPASy TrEMBL
Match: A0A5D3DB39 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00890 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 2.8e-54
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0

Query: 1   MGVEQNDPLKGVEQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRR 60
           MGVEQNDPLKGVEQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRR
Sbjct: 1   MGVEQNDPLKGVEQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRR 60

Query: 61  PLPYVMAFYGACIAGGIGAGMLVEMWINDKIKKDGGVIWEFDK 104
           PLPYVMAFYGACIAGGIGAGMLVEMWINDKIKKDGGVIWEFDK
Sbjct: 61  PLPYVMAFYGACIAGGIGAGMLVEMWINDKIKKDGGVIWEFDK 103

BLAST of IVF0010811 vs. ExPASy TrEMBL
Match: A0A1S3AV52 (uncharacterized protein LOC103483172 OS=Cucumis melo OX=3656 GN=LOC103483172 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 2.8e-54
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0

Query: 1   MGVEQNDPLKGVEQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRR 60
           MGVEQNDPLKGVEQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRR
Sbjct: 1   MGVEQNDPLKGVEQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRR 60

Query: 61  PLPYVMAFYGACIAGGIGAGMLVEMWINDKIKKDGGVIWEFDK 104
           PLPYVMAFYGACIAGGIGAGMLVEMWINDKIKKDGGVIWEFDK
Sbjct: 61  PLPYVMAFYGACIAGGIGAGMLVEMWINDKIKKDGGVIWEFDK 103

BLAST of IVF0010811 vs. ExPASy TrEMBL
Match: A0A0A0L8I7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119440 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 3.8e-51
Identity = 99/103 (96.12%), Postives = 100/103 (97.09%), Query Frame = 0

Query: 1   MGVEQNDPLKGVEQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRR 60
           MGVEQNDPLKGVEQKDP KGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRR
Sbjct: 1   MGVEQNDPLKGVEQKDPLKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRR 60

Query: 61  PLPYVMAFYGACIAGGIGAGMLVEMWINDKIKKDGGVIWEFDK 104
            LP VMAFYGACIAGGIGAGMLVE+WINDKIKKDGGVIWEFDK
Sbjct: 61  SLPSVMAFYGACIAGGIGAGMLVEIWINDKIKKDGGVIWEFDK 103

BLAST of IVF0010811 vs. ExPASy TrEMBL
Match: A0A6J1FVE8 (uncharacterized protein LOC111447184 OS=Cucurbita moschata OX=3662 GN=LOC111447184 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 8.0e-41
Identity = 79/91 (86.81%), Postives = 86/91 (94.51%), Query Frame = 0

Query: 13  EQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRPLPYVMAFYGAC 72
           E KDPFKGVDWKAVGGDMQKDPSS NI+KKRRPTK+RQIP+YYFLPRR LP V+AFYGAC
Sbjct: 4   EAKDPFKGVDWKAVGGDMQKDPSSINILKKRRPTKVRQIPEYYFLPRRSLPSVLAFYGAC 63

Query: 73  IAGGIGAGMLVEMWINDKIKKDGGVIWEFDK 104
           IAGGIGAGMLVE+WI DK+KKDGGV+WEFDK
Sbjct: 64  IAGGIGAGMLVEIWIKDKVKKDGGVVWEFDK 94

BLAST of IVF0010811 vs. ExPASy TrEMBL
Match: A0A6J1IJJ2 (uncharacterized protein LOC111475080 OS=Cucurbita maxima OX=3661 GN=LOC111475080 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 6.7e-40
Identity = 78/91 (85.71%), Postives = 85/91 (93.41%), Query Frame = 0

Query: 13  EQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRPLPYVMAFYGAC 72
           E KDPFKGVDWKAVGGDMQKDPSS NI+KKRRPTK+RQIP+YYFLPRR L  V+AFYGAC
Sbjct: 4   EAKDPFKGVDWKAVGGDMQKDPSSINILKKRRPTKVRQIPEYYFLPRRSLSSVLAFYGAC 63

Query: 73  IAGGIGAGMLVEMWINDKIKKDGGVIWEFDK 104
           IAGGIGAGMLVE+WI DK+KKDGGV+WEFDK
Sbjct: 64  IAGGIGAGMLVEIWIKDKVKKDGGVVWEFDK 94

BLAST of IVF0010811 vs. NCBI nr
Match: XP_008437869.1 (PREDICTED: uncharacterized protein LOC103483172 [Cucumis melo] >KAA0048876.1 uncharacterized protein E6C27_scaffold171G00910 [Cucumis melo var. makuwa] >TYK20827.1 uncharacterized protein E5676_scaffold291G00890 [Cucumis melo var. makuwa])

HSP 1 Score: 221 bits (564), Expect = 5.10e-73
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0

Query: 1   MGVEQNDPLKGVEQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRR 60
           MGVEQNDPLKGVEQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRR
Sbjct: 1   MGVEQNDPLKGVEQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRR 60

Query: 61  PLPYVMAFYGACIAGGIGAGMLVEMWINDKIKKDGGVIWEFDK 103
           PLPYVMAFYGACIAGGIGAGMLVEMWINDKIKKDGGVIWEFDK
Sbjct: 61  PLPYVMAFYGACIAGGIGAGMLVEMWINDKIKKDGGVIWEFDK 103

BLAST of IVF0010811 vs. NCBI nr
Match: XP_004133805.1 (uncharacterized protein LOC101207877 [Cucumis sativus] >KGN56411.1 hypothetical protein Csa_009724 [Cucumis sativus])

HSP 1 Score: 211 bits (537), Expect = 6.73e-69
Identity = 99/103 (96.12%), Postives = 100/103 (97.09%), Query Frame = 0

Query: 1   MGVEQNDPLKGVEQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRR 60
           MGVEQNDPLKGVEQKDP KGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRR
Sbjct: 1   MGVEQNDPLKGVEQKDPLKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRR 60

Query: 61  PLPYVMAFYGACIAGGIGAGMLVEMWINDKIKKDGGVIWEFDK 103
            LP VMAFYGACIAGGIGAGMLVE+WINDKIKKDGGVIWEFDK
Sbjct: 61  SLPSVMAFYGACIAGGIGAGMLVEIWINDKIKKDGGVIWEFDK 103

BLAST of IVF0010811 vs. NCBI nr
Match: XP_023522177.1 (uncharacterized protein LOC111786056 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 179 bits (454), Expect = 2.34e-56
Identity = 80/91 (87.91%), Postives = 87/91 (95.60%), Query Frame = 0

Query: 13  EQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRPLPYVMAFYGAC 72
           E KDPFKGVDWKAVGGDMQKDPSS NI+KKRRPTK+RQIP+YYFLPRR LP V+AFYGAC
Sbjct: 4   EAKDPFKGVDWKAVGGDMQKDPSSINILKKRRPTKVRQIPEYYFLPRRSLPSVLAFYGAC 63

Query: 73  IAGGIGAGMLVEMWINDKIKKDGGVIWEFDK 103
           IAGGIGAGMLVE+WINDK+KKDGGV+WEFDK
Sbjct: 64  IAGGIGAGMLVEIWINDKVKKDGGVVWEFDK 94

BLAST of IVF0010811 vs. NCBI nr
Match: XP_022942020.1 (uncharacterized protein LOC111447184 [Cucurbita moschata] >KAG6597065.1 hypothetical protein SDJN03_10245, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028536.1 hypothetical protein SDJN02_09717 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 177 bits (448), Expect = 1.92e-55
Identity = 79/91 (86.81%), Postives = 86/91 (94.51%), Query Frame = 0

Query: 13  EQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRPLPYVMAFYGAC 72
           E KDPFKGVDWKAVGGDMQKDPSS NI+KKRRPTK+RQIP+YYFLPRR LP V+AFYGAC
Sbjct: 4   EAKDPFKGVDWKAVGGDMQKDPSSINILKKRRPTKVRQIPEYYFLPRRSLPSVLAFYGAC 63

Query: 73  IAGGIGAGMLVEMWINDKIKKDGGVIWEFDK 103
           IAGGIGAGMLVE+WI DK+KKDGGV+WEFDK
Sbjct: 64  IAGGIGAGMLVEIWIKDKVKKDGGVVWEFDK 94

BLAST of IVF0010811 vs. NCBI nr
Match: XP_022975548.1 (uncharacterized protein LOC111475080 [Cucurbita maxima])

HSP 1 Score: 174 bits (440), Expect = 3.20e-54
Identity = 78/91 (85.71%), Postives = 85/91 (93.41%), Query Frame = 0

Query: 13  EQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRPLPYVMAFYGAC 72
           E KDPFKGVDWKAVGGDMQKDPSS NI+KKRRPTK+RQIP+YYFLPRR L  V+AFYGAC
Sbjct: 4   EAKDPFKGVDWKAVGGDMQKDPSSINILKKRRPTKVRQIPEYYFLPRRSLSSVLAFYGAC 63

Query: 73  IAGGIGAGMLVEMWINDKIKKDGGVIWEFDK 103
           IAGGIGAGMLVE+WI DK+KKDGGV+WEFDK
Sbjct: 64  IAGGIGAGMLVEIWIKDKVKKDGGVVWEFDK 94

BLAST of IVF0010811 vs. TAIR 10
Match: AT5G16950.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 94.7 bits (234), Expect = 4.5e-20
Identity = 44/94 (46.81%), Postives = 63/94 (67.02%), Query Frame = 0

Query: 15  KDPFKGVDWKAVGGDMQKDPSSTNI-----IKKRRPTKIRQIPDYYFLPRRPLPYVMAFY 74
           KDP+KG +W     +  K P+++ +      +K+ P  +    + YFLPR+P P  +A+Y
Sbjct: 7   KDPWKGEEW-GTENEKTKKPTTSGVKTVTRARKQIPRGLEDKYEAYFLPRKPWPRALAYY 66

Query: 75  GACIAGGIGAGMLVEMWINDKIKKDGGVIWEFDK 104
           G+ I GGIGAGM++E WIN K+K+DGGVIWEFDK
Sbjct: 67  GSFILGGIGAGMVIEAWINKKVKEDGGVIWEFDK 99

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3DB392.8e-54100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3AV522.8e-54100.00uncharacterized protein LOC103483172 OS=Cucumis melo OX=3656 GN=LOC103483172 PE=... [more]
A0A0A0L8I73.8e-5196.12Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119440 PE=4 SV=1[more]
A0A6J1FVE88.0e-4186.81uncharacterized protein LOC111447184 OS=Cucurbita moschata OX=3662 GN=LOC1114471... [more]
A0A6J1IJJ26.7e-4085.71uncharacterized protein LOC111475080 OS=Cucurbita maxima OX=3661 GN=LOC111475080... [more]
Match NameE-valueIdentityDescription
XP_008437869.15.10e-73100.00PREDICTED: uncharacterized protein LOC103483172 [Cucumis melo] >KAA0048876.1 unc... [more]
XP_004133805.16.73e-6996.12uncharacterized protein LOC101207877 [Cucumis sativus] >KGN56411.1 hypothetical ... [more]
XP_023522177.12.34e-5687.91uncharacterized protein LOC111786056 [Cucurbita pepo subsp. pepo][more]
XP_022942020.11.92e-5586.81uncharacterized protein LOC111447184 [Cucurbita moschata] >KAG6597065.1 hypothet... [more]
XP_022975548.13.20e-5485.71uncharacterized protein LOC111475080 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
AT5G16950.14.5e-2046.81unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36797OS01G0258600 PROTEINcoord: 13..103
NoneNo IPR availablePANTHERPTHR36797:SF3OS01G0258600 PROTEINcoord: 13..103

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0010811.1IVF0010811.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane