IVF0010368 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATCTTGTGAAGATTGATGTGGTTAGTAAATTGCCACTGCCTTCTGATTTAAAACCATTACGAAGCTTTTTGAGACATGTTGGGTTCTATCGCAGATTCATCAAAGGATTTTTCCAAATCGCCAAACCACTGAGAAACGTATTGAGCGTAAATCAACCTACATCTTTGATGAGAAGTGCCACCAGGCATTCCAAACATTAAAAGACATGTTGACCCCAACGTCTATCCTCATCACTCCTGATTGGTTGCAACCATTTGAATTGATGTGCGACACAAGTGATGTGACGGTAGGAGCTATATTAGGTCAAAAGAAGGATAAAGTGATCCACCCGATATACTACGCGGGATACAAATGA ATGGATCTTGTGAAGATTGATGTGATTCATCAAAGGATTTTTCCAAATCGCCAAACCACTGAGAAACGTATTGAGCGTAAATCAACCTACATCTTTGATGAGAAGTGCCACCAGGCATTCCAAACATTAAAAGACATGTTGACCCCAACGTCTATCCTCATCACTCCTGATTGGTTGCAACCATTTGAATTGATGTGCGACACAAGTGATGTGACGGTAGGAGCTATATTAGGTCAAAAGAAGGATAAAGTGATCCACCCGATATACTACGCGGGATACAAATGA ATGGATCTTGTGAAGATTGATGTGATTCATCAAAGGATTTTTCCAAATCGCCAAACCACTGAGAAACGTATTGAGCGTAAATCAACCTACATCTTTGATGAGAAGTGCCACCAGGCATTCCAAACATTAAAAGACATGTTGACCCCAACGTCTATCCTCATCACTCCTGATTGGTTGCAACCATTTGAATTGATGTGCGACACAAGTGATGTGACGGTAGGAGCTATATTAGGTCAAAAGAAGGATAAAGTGATCCACCCGATATACTACGCGGGATACAAATGA MDLVKIDVIHQRIFPNRQTTEKRIERKSTYIFDEKCHQAFQTLKDMLTPTSILITPDWLQPFELMCDTSDVTVGAILGQKKDKVIHPIYYAGYK Homology
BLAST of IVF0010368 vs. ExPASy TrEMBL
Match: A0A5D3DSQ6 (RT_RNaseH_2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G002240 PE=4 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 3.0e-47 Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0
BLAST of IVF0010368 vs. ExPASy TrEMBL
Match: A0A5D3DSP9 (Putative polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G002130 PE=4 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 3.0e-18 Identity = 50/81 (61.73%), Postives = 60/81 (74.07%), Query Frame = 0
BLAST of IVF0010368 vs. ExPASy TrEMBL
Match: A0A5A7UKH8 (Retrovirus-related Pol polyprotein from transposon 412 family OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold437G00810 PE=4 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 5.1e-18 Identity = 52/90 (57.78%), Postives = 59/90 (65.56%), Query Frame = 0
BLAST of IVF0010368 vs. ExPASy TrEMBL
Match: A0A5A7V7K1 (Putative polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold154G001740 PE=4 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 8.7e-18 Identity = 50/75 (66.67%), Postives = 58/75 (77.33%), Query Frame = 0
BLAST of IVF0010368 vs. ExPASy TrEMBL
Match: A0A6P5N2H8 (uncharacterized protein LOC110277225 OS=Arachis duranensis OX=130453 GN=LOC110277225 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 9.6e-17 Identity = 41/83 (49.40%), Postives = 59/83 (71.08%), Query Frame = 0
BLAST of IVF0010368 vs. NCBI nr
Match: KAA0062384.1 (uncharacterized protein E6C27_scaffold154G001600 [Cucumis melo var. makuwa] >TYK26594.1 uncharacterized protein E5676_scaffold313G002240 [Cucumis melo var. makuwa]) HSP 1 Score: 196 bits (499), Expect = 2.19e-63 Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0
BLAST of IVF0010368 vs. NCBI nr
Match: KAA0062396.1 (putative polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 99.4 bits (246), Expect = 1.22e-24 Identity = 50/75 (66.67%), Postives = 58/75 (77.33%), Query Frame = 0
BLAST of IVF0010368 vs. NCBI nr
Match: TYK26584.1 (putative polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 100 bits (249), Expect = 2.44e-24 Identity = 50/81 (61.73%), Postives = 60/81 (74.07%), Query Frame = 0
BLAST of IVF0010368 vs. NCBI nr
Match: KAA0054796.1 (Retrovirus-related Pol polyprotein from transposon 412 family [Cucumis melo var. makuwa]) HSP 1 Score: 99.8 bits (247), Expect = 2.53e-24 Identity = 52/90 (57.78%), Postives = 59/90 (65.56%), Query Frame = 0
BLAST of IVF0010368 vs. NCBI nr
Match: KAA0067087.1 (Retrovirus-related Pol polyprotein from transposon 412 family [Cucumis melo var. makuwa] >TYK26322.1 Retrovirus-related Pol polyprotein from transposon 412 family [Cucumis melo var. makuwa]) HSP 1 Score: 91.7 bits (226), Expect = 1.48e-21 Identity = 43/83 (51.81%), Postives = 55/83 (66.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|