IVF0009818 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTAAGTATGTGATAGCTTTAGTATTATATGAGGAGGATAACTGTAAGCAATTTGACGAAGGATTAAGGACTGAAATTCAAACTCCAATTACAGCTAGCGCATACTGGTTAAATTTTCATAAGATGGTTGATGCAGTCATGCGAGTTGAAGGGTCTTTGGCTGAAAAAGAAGATAAGAGTTGGAAAAGAGGTCAAGTTCTATGA ATGGCTAAGTATGTGATAGCTTTAGTATTATATGAGGAGGATAACTGTAAGCAATTTGACGAAGGATTAAGGACTGAAATTCAAACTCCAATTACAGCTAGCGCATACTGGTTAAATTTTCATAAGATGGTTGATGCAGTCATGCGAGTTGAAGGGTCTTTGGCTGAAAAAGAAGATAAGAGTTGGAAAAGAGGTCAAGTTCTATGA ATGGCTAAGTATGTGATAGCTTTAGTATTATATGAGGAGGATAACTGTAAGCAATTTGACGAAGGATTAAGGACTGAAATTCAAACTCCAATTACAGCTAGCGCATACTGGTTAAATTTTCATAAGATGGTTGATGCAGTCATGCGAGTTGAAGGGTCTTTGGCTGAAAAAGAAGATAAGAGTTGGAAAAGAGGTCAAGTTCTATGA MAKYVIALVLYEEDNCKQFDEGLRTEIQTPITASAYWLNFHKMVDAVMRVEGSLAEKEDKSWKRGQVL Homology
BLAST of IVF0009818 vs. ExPASy TrEMBL
Match: A0A5A7VGM1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold76G00210 PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 6.9e-09 Identity = 33/51 (64.71%), Postives = 39/51 (76.47%), Query Frame = 0
BLAST of IVF0009818 vs. ExPASy TrEMBL
Match: A0A5D3CHM7 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold73G00100 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 3.4e-08 Identity = 26/58 (44.83%), Postives = 43/58 (74.14%), Query Frame = 0
BLAST of IVF0009818 vs. ExPASy TrEMBL
Match: A0A5A7VRP7 (Retrotransposon protein, putative, Ty3-gypsy subclass OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2484G00360 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 3.4e-08 Identity = 26/58 (44.83%), Postives = 43/58 (74.14%), Query Frame = 0
BLAST of IVF0009818 vs. ExPASy TrEMBL
Match: A0A5A7TLH7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold824G00900 PE=4 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 4.5e-08 Identity = 25/58 (43.10%), Postives = 42/58 (72.41%), Query Frame = 0
BLAST of IVF0009818 vs. ExPASy TrEMBL
Match: A0A5A7TG44 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G006940 PE=4 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 1.0e-07 Identity = 28/58 (48.28%), Postives = 43/58 (74.14%), Query Frame = 0
BLAST of IVF0009818 vs. NCBI nr
Match: KAA0065476.1 (uncharacterized protein E6C27_scaffold17G001750 [Cucumis melo var. makuwa] >TYK08718.1 uncharacterized protein E5676_scaffold76G00210 [Cucumis melo var. makuwa]) HSP 1 Score: 67.8 bits (164), Expect = 3.21e-12 Identity = 33/51 (64.71%), Postives = 39/51 (76.47%), Query Frame = 0
BLAST of IVF0009818 vs. NCBI nr
Match: KAA0062762.1 (zf-CCHC domain-containing protein [Cucumis melo var. makuwa] >TYK08836.1 zf-CCHC domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 62.8 bits (151), Expect = 9.36e-11 Identity = 29/62 (46.77%), Postives = 42/62 (67.74%), Query Frame = 0
BLAST of IVF0009818 vs. NCBI nr
Match: XP_038890030.1 (uncharacterized protein LOC120079741 [Benincasa hispida]) HSP 1 Score: 65.1 bits (157), Expect = 1.41e-10 Identity = 25/58 (43.10%), Postives = 46/58 (79.31%), Query Frame = 0
BLAST of IVF0009818 vs. NCBI nr
Match: KAA0054440.1 (zf-CCHC domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 60.8 bits (146), Expect = 2.17e-10 Identity = 28/61 (45.90%), Postives = 43/61 (70.49%), Query Frame = 0
BLAST of IVF0009818 vs. NCBI nr
Match: TYK11035.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]) HSP 1 Score: 65.1 bits (157), Expect = 3.37e-10 Identity = 26/58 (44.83%), Postives = 43/58 (74.14%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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