IVF0009399 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCACCGCAAGAAAGGTCGAGAAGAGGCAGTCAAGTAATAACTGGTGTTCAAGGTACAAGGACCGTTGATAGAGTGCAAGAATCTGACGAGATGTCTTGTAATGCACATAACCTTGTTGGCCAAAACGTGTTGGAAAGCATGTTTGACCGCTTCACTAAAAAATTAAATGATCATTTTATGCCTACACCTACCACTATGTGTAAGAGGTTTGGCATTGAGAGATTAAAGGCGTTGAGAGCAATGACCTTTGAAGGAACCACTAATCCAGTTGATGCAAAGAAGTGGTTGAGTTTGATTGAAAAGTGTTTTGGGGTGTGGAGTGCCTCGAAGAAAGAAAAGTGA ATGGCACCGCAAGAAAGGTCGAGAAGAGGCAGTCAAGTAATAACTGGTGTTCAAGGTACAAGGACCGTTGATAGAGTGCAAGAATCTGACGAGATGTCTTGTAATGCACATAACCTTGTTGGCCAAAACGTGTTGGAAAGCATGTTTGACCGCTTCACTAAAAAATTAAATGATCATTTTATGCCTACACCTACCACTATGTGTAAGAGGTTTGGCATTGAGAGATTAAAGGCGTTGAGAGCAATGACCTTTGAAGGAACCACTAATCCAGTTGATGCAAAGAAGTGGTTGAGTTTGATTGAAAAGTGTTTTGGGGTGTGGAGTGCCTCGAAGAAAGAAAAGTGA ATGGCACCGCAAGAAAGGTCGAGAAGAGGCAGTCAAGTAATAACTGGTGTTCAAGGTACAAGGACCGTTGATAGAGTGCAAGAATCTGACGAGATGTCTTGTAATGCACATAACCTTGTTGGCCAAAACGTGTTGGAAAGCATGTTTGACCGCTTCACTAAAAAATTAAATGATCATTTTATGCCTACACCTACCACTATGTGTAAGAGGTTTGGCATTGAGAGATTAAAGGCGTTGAGAGCAATGACCTTTGAAGGAACCACTAATCCAGTTGATGCAAAGAAGTGGTTGAGTTTGATTGAAAAGTGTTTTGGGGTGTGGAGTGCCTCGAAGAAAGAAAAGTGA MAPQERSRRGSQVITGVQGTRTVDRVQESDEMSCNAHNLVGQNVLESMFDRFTKKLNDHFMPTPTTMCKRFGIERLKALRAMTFEGTTNPVDAKKWLSLIEKCFGVWSASKKEK Homology
BLAST of IVF0009399 vs. ExPASy TrEMBL
Match: A0A5D3BCS9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold469G00160 PE=4 SV=1) HSP 1 Score: 235.3 bits (599), Expect = 1.2e-58 Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0
BLAST of IVF0009399 vs. ExPASy TrEMBL
Match: A0A5A7UG91 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00210 PE=4 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 2.0e-56 Identity = 111/114 (97.37%), Postives = 113/114 (99.12%), Query Frame = 0
BLAST of IVF0009399 vs. ExPASy TrEMBL
Match: A0A5A7TVM1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold68G00730 PE=4 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 4.3e-27 Identity = 67/107 (62.62%), Postives = 77/107 (71.96%), Query Frame = 0
BLAST of IVF0009399 vs. ExPASy TrEMBL
Match: A0A5D3BUF6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold775G00680 PE=4 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 9.8e-24 Identity = 64/116 (55.17%), Postives = 80/116 (68.97%), Query Frame = 0
BLAST of IVF0009399 vs. ExPASy TrEMBL
Match: A0A5D3DXF8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold289G00110 PE=4 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 2.0e-21 Identity = 59/99 (59.60%), Postives = 70/99 (70.71%), Query Frame = 0
BLAST of IVF0009399 vs. NCBI nr
Match: TYJ97632.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 233 bits (593), Expect = 6.18e-75 Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0
BLAST of IVF0009399 vs. NCBI nr
Match: KAA0053236.1 (uncharacterized protein E6C27_scaffold102G00210 [Cucumis melo var. makuwa]) HSP 1 Score: 225 bits (574), Expect = 3.43e-74 Identity = 111/114 (97.37%), Postives = 113/114 (99.12%), Query Frame = 0
BLAST of IVF0009399 vs. NCBI nr
Match: KAA0047014.1 (hypothetical protein E6C27_scaffold230G002160 [Cucumis melo var. makuwa] >TYK04769.1 hypothetical protein E5676_scaffold68G00730 [Cucumis melo var. makuwa]) HSP 1 Score: 128 bits (322), Expect = 1.69e-35 Identity = 67/106 (63.21%), Postives = 76/106 (71.70%), Query Frame = 0
BLAST of IVF0009399 vs. NCBI nr
Match: KAA0039561.1 (hypothetical protein E6C27_scaffold744G00310 [Cucumis melo var. makuwa] >TYK01739.1 hypothetical protein E5676_scaffold775G00680 [Cucumis melo var. makuwa]) HSP 1 Score: 117 bits (292), Expect = 4.80e-31 Identity = 64/116 (55.17%), Postives = 80/116 (68.97%), Query Frame = 0
BLAST of IVF0009399 vs. NCBI nr
Match: TYK28108.1 (hypothetical protein E5676_scaffold289G00110 [Cucumis melo var. makuwa]) HSP 1 Score: 110 bits (274), Expect = 2.31e-28 Identity = 59/99 (59.60%), Postives = 70/99 (70.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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