IVF0009207 (gene) Melon (IVF77) v1

Overview


Name	IVF0009207
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Unknown protein
Location	chr08: 1731168 .. 1732146 (-)
RNA-Seq Expression	IVF0009207
Synteny	IVF0009207

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCCTATTGTCTTTTTCTTATTAAGGGAAAGAAAAATGGACCCATTTGCTTCAGTTGTAGTGGAATGTAATGTGTACCAAATAGTAATTTAATCCTTCATATATATATATATATGTATGCATATTTTGTTAATGTAGAATTTCAAAGGAATCATTTCTCCAAATTGATGAATTCGAGAAATATCAAAATGATTAATACTAATAAAAAGAATCATCAGAATCACACAAAGACACAAAGTATCTACGACTCCACGTTAGTGGCAACGGAGAGGAATTTCGGTGAATCACATAGTAACTTCGCCGCTAATTAGCAGAGACAGGGAAACCAATTCCATGGCGTTTGGTCGGAAAAACAACAAACAACATACTACAAAACACCCCAATGGCAACCGGCAAAGACGTCAAAATCTCCTCCGCCTGATCCGACGGCGTCGGGTAGAAACAGTTCACCACATTCTCATCAAACAGAGCAACAGCCGAGAAAACCAGAATCGACATGAAAGCATGCAGGAAATCAATAAACCTCAGCCGATACTTAGCCGCGACGGTCGGCGGAAGTTCCACGGAGCCGTCGATGACCCACAAGCCTCTGAAAGTGGCGAATCCATAGGAAACATTCCCCTGACTGTCTCTGAAACTATCCGTGAAACTCTGAAGAAAACAAGACAATCCACAGAGAGCAACGAGGCCGGCGGTGAGGTAGCGAGAAATTGAGTCGCAGTTGCCTTGATTGGTGAAAATGGGGGAAAGAAGTTGAAATGCGAGGACAGTTCCAGTAGGTAGAAGATTAGCCAGATTAGCAGTGCTTCGAAAGGTTTGAGAAATGGCTTTTGGATGAGGGTTTTTTCATCTCTTGATGGGATGAACGTGGTTTCTCGCAAAAGGGTTGTTTCTGATCAATACGAGATTGGGTTTCTTCATCGGCGGTTTTGATCTCCATGGGTGAGAGGTTGAAATTGGAATACAATCAGTAAAAGGGC

mRNA sequence

ATCCTATTGTCTTTTTCTTATTAAGGGAAAGAAAAATGGACCCATTTGCTTCAGTTGTAGTGGAATGTAATGTGTACCAAATAGTAATTTAATCCTTCATATATATATATATATGTATGCATATTTTGTTAATGTAGAATTTCAAAGGAATCATTTCTCCAAATTGATGAATTCGAGAAATATCAAAATGATTAATACTAATAAAAAGAATCATCAGAATCACACAAAGACACAAAGTATCTACGACTCCACGTTAGTGGCAACGGAGAGGAATTTCGGTGAATCACATAGTAACTTCGCCGCTAATTAGCAGAGACAGGGAAACCAATTCCATGGCGTTTGGTCGGAAAAACAACAAACAACATACTACAAAACACCCCAATGGCAACCGGCAAAGACGTCAAAATCTCCTCCGCCTGATCCGACGGCGTCGGGTAGAAACAGTTCACCACATTCTCATCAAACAGAGCAACAGCCGAGAAAACCAGAATCGACATGAAAGCATGCAGGAAATCAATAAACCTCAGCCGATACTTAGCCGCGACGGTCGGCGGAAGTTCCACGGAGCCGTCGATGACCCACAAGCCTCTGAAAGTGGCGAATCCATAGGAAACATTCCCCTGACTGTCTCTGAAACTATCCGTGAAACTCTGAAGAAAACAAGACAATCCACAGAGAGCAACGAGGCCGGCGGTGAGGTAGCGAGAAATTGAGTCGCAGTTGCCTTGATTGGTGAAAATGGGGGAAAGAAGTTGAAATGCGAGGACAGTTCCAGTAGGTAGAAGATTAGCCAGATTAGCAGTGCTTCGAAAGGTTTGAGAAATGGCTTTTGGATGAGGGTTTTTTCATCTCTTGATGGGATGAACGTGGTTTCTCGCAAAAGGGTTGTTTCTGATCAATACGAGATTGGGTTTCTTCATCGGCGGTTTTGATCTCCATGGGTGAGAGGTTGAAATTGGAATACAATCAGTAAAAGGGC

Coding sequence (CDS)

ATGGCGTTTGGTCGGAAAAACAACAAACAACATACTACAAAACACCCCAATGGCAACCGGCAAAGACGTCAAAATCTCCTCCGCCTGATCCGACGGCGTCGGGTAGAAACAGTTCACCACATTCTCATCAAACAGAGCAACAGCCGAGAAAACCAGAATCGACATGAAAGCATGCAGGAAATCAATAAACCTCAGCCGATACTTAGCCGCGACGGTCGGCGGAAGTTCCACGGAGCCGTCGATGACCCACAAGCCTCTGAAAGTGGCGAATCCATAGGAAACATTCCCCTGACTGTCTCTGAAACTATCCGTGAAACTCTGAAGAAAACAAGACAATCCACAGAGAGCAACGAGGCCGGCGGTGAGGTAGCGAGAAATTGA

Protein sequence

MAFGRKNNKQHTTKHPNGNRQRRQNLLRLIRRRRVETVHHILIKQSNSRENQNRHESMQEINKPQPILSRDGRRKFHGAVDDPQASESGESIGNIPLTVSETIRETLKKTRQSTESNEAGGEVARN

Homology

[Close]

BLAST of IVF0009207 vs. ExPASy TrEMBL
Match: A0A0A0KK92 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518140 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 5.9e-54
Identity = 117/126 (92.86%), Postives = 121/126 (96.03%), Query Frame = 0


Query: 1   MAFGRKNNKQHTTKHPNGNRQRRQNLLRLIRRRRVETVHHILIKQSNSRENQNRHESMQE 60
           MA GRK+NKQHTTKHPN NRQRRQNLLRLIR RRV+TVHHILIKQSNSRENQNRHESMQE
Sbjct: 1   MASGRKSNKQHTTKHPNCNRQRRQNLLRLIRWRRVKTVHHILIKQSNSRENQNRHESMQE 60

Query: 61  INKPQPILSRDGRRKFHGAVDDPQASESGESIGNIPLTVSETIRETLKKTRQSTESNEAG 120
           INKPQPI SRDGRRKFHGAVDDPQASESGESIGNIPLTVSETI ETLK+TRQSTESN+AG
Sbjct: 61  INKPQPITSRDGRRKFHGAVDDPQASESGESIGNIPLTVSETISETLKETRQSTESNKAG 120

Query: 121 GEVARN 127
           GEVARN
Sbjct: 121 GEVARN 126

[Close]

BLAST of IVF0009207 vs. ExPASy TrEMBL
Match: A0A2P5CHX1 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_284420 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 9.5e-20
Identity = 64/121 (52.89%), Postives = 84/121 (69.42%), Query Frame = 0


Query: 1   MAFGRKNNKQHTTKHPNGNRQRRQNLLRLIRRRRVETVHHILIKQSNSRENQNRHESMQE 60
           +A G KN+KQHTT   N NRQRR+NLL LIRRR ++  HHILIKQSN R+++  H+SM E
Sbjct: 29  VALGGKNDKQHTTNDTNPNRQRRKNLLSLIRRRWIKATHHILIKQSNGRKHEYGHQSMHE 88

Query: 61  INKPQPILSRDGRRKFHGAVDDPQASESGESIGNIPLTVSETIRETLKKTRQSTESNEAG 120
           I+K   IL    RR+  GAVD PQ S  GE+I +I + V +TIRE  +K  +S +S++A 
Sbjct: 89  IDKLHTILRSLLRRERGGAVDHPQPSPRGETIAHISVLVPKTIREAEQKRGRSAQSHKAR 148

Query: 121 G 122
           G
Sbjct: 149 G 149

[Close]

BLAST of IVF0009207 vs. ExPASy TrEMBL
Match: A0A059C851 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_E03237 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 6.0e-06
Identity = 33/82 (40.24%), Postives = 58/82 (70.73%), Query Frame = 0


Query: 4  GRKNNKQHTTKHPNGNRQRRQNLLRLIRRRRVETVHHILIKQSNSRENQNRHESMQEINK 63
          GR++++QH+    + +RQRRQ+L  L+R RRVE  HH+L+++ +  ++Q RH+ ++++ +
Sbjct: 18 GREHDEQHSADGSDPHRQRRQHLPSLVRWRRVEAAHHVLVEKRDRPKHQYRHDRVRKVYE 77

Query: 64 PQPILSRDGRRKFHGAVDDPQA 86
          PQP+L  + RR+    VD PQA
Sbjct: 78 PQPVLILELRRERVQPVDHPQA 99

[Close]

BLAST of IVF0009207 vs. ExPASy TrEMBL
Match: A0A484M656 (Uncharacterized protein OS=Cuscuta campestris OX=132261 GN=CCAM_LOCUS25873 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 6.0e-06
Identity = 42/120 (35.00%), Postives = 63/120 (52.50%), Query Frame = 0


Query: 1   MAFGRKNNKQHTTKHPNGNRQRRQNLLRLIRRRRVETVHHILIKQSNSRENQNRHESMQE 60
           MAF  + N+++ T  PN  RQ RQ LLRL RRRRV+TVH +L++Q    EN++  + ++E
Sbjct: 1   MAFAGERNEKNATHKPNARRQNRQKLLRLRRRRRVQTVHDVLVQQRRGGENKDGVDGVEE 60

Query: 61  INKPQPILSR--DGRRKFHGAVDDPQASESGESIGNIPLTVSETIRETLKKTRQSTESNE 119
           I        R   G R     V+D ++ E GE + +    V E + ET  +  +     E
Sbjct: 61  IQHRYSPFGRLVGGNRGGGRQVEDEESPERGEGVTDFSPLVPEAVGETEDEAGRGASGEE 120

[Close]

BLAST of IVF0009207 vs. ExPASy TrEMBL
Match: A0A151RHL3 (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_036570 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 2.3e-05
Identity = 30/61 (49.18%), Postives = 44/61 (72.13%), Query Frame = 0


Query: 58  MQEINKPQPILSRDGRRKFHGAVDDPQASESGESIGNIPLTVSETIRETLKKTRQSTESN 117
           M EIN+PQPI     R K  G+++DPQA + G+++ NIPL +SE I E L++TR ST+S+
Sbjct: 1   MHEINEPQPISCTKLRWKGGGSINDPQAPQGGKAMTNIPLVISEAISEALEETRGSTKSH 60

Query: 118 E 119
           +
Sbjct: 61  K 61

[Close]

BLAST of IVF0009207 vs. NCBI nr
Match: PON60637.1 (hypothetical protein TorRG33x02_284420 [Trema orientale])

HSP 1 Score: 107 bits (266), Expect = 2.54e-26
Identity = 64/121 (52.89%), Postives = 84/121 (69.42%), Query Frame = 0


Query: 1   MAFGRKNNKQHTTKHPNGNRQRRQNLLRLIRRRRVETVHHILIKQSNSRENQNRHESMQE 60
           +A G KN+KQHTT   N NRQRR+NLL LIRRR ++  HHILIKQSN R+++  H+SM E
Sbjct: 29  VALGGKNDKQHTTNDTNPNRQRRKNLLSLIRRRWIKATHHILIKQSNGRKHEYGHQSMHE 88

Query: 61  INKPQPILSRDGRRKFHGAVDDPQASESGESIGNIPLTVSETIRETLKKTRQSTESNEAG 120
           I+K   IL    RR+  GAVD PQ S  GE+I +I + V +TIRE  +K  +S +S++A 
Sbjct: 89  IDKLHTILRSLLRRERGGAVDHPQPSPRGETIAHISVLVPKTIREAEQKRGRSAQSHKAR 148

[Close]

BLAST of IVF0009207 vs. NCBI nr
Match: KYP42008.1 (hypothetical protein KK1_036570 [Cajanus cajan])

HSP 1 Score: 60.5 bits (145), Expect = 2.60e-09
Identity = 30/60 (50.00%), Postives = 43/60 (71.67%), Query Frame = 0


Query: 58  MQEINKPQPILSRDGRRKFHGAVDDPQASESGESIGNIPLTVSETIRETLKKTRQSTESN 117
           M EIN+PQPI     R K  G+++DPQA + G+++ NIPL +SE I E L++TR ST+S+
Sbjct: 1   MHEINEPQPISCTKLRWKGGGSINDPQAPQGGKAMTNIPLVISEAISEALEETRGSTKSH 60

[Close]

BLAST of IVF0009207 vs. NCBI nr
Match: VFQ84097.1 (unnamed protein product [Cuscuta campestris])

HSP 1 Score: 61.6 bits (148), Expect = 1.15e-08
Identity = 41/108 (37.96%), Postives = 60/108 (55.56%), Query Frame = 0


Query: 1   MAFGRKNNKQHTTKHPNGNRQRRQNLLRLIRRRRVETVHHILIKQSNSRENQNRHESMQE 60
           MAF  + N+++ T  PN  RQ RQ LLRL RRRRV+TVH +L++Q    EN++  + ++E
Sbjct: 1   MAFAGERNEKNATHKPNARRQNRQKLLRLRRRRRVQTVHDVLVQQRRGGENKDGVDGVEE 60

Query: 61  INKPQPILSR--DGRRKFHGAVDDPQASESGESIGNIPLTVSETIRET 106
           I        R   G R     V+D ++ E GE + +    V E + ET
Sbjct: 61  IQHRYSPFGRLVGGNRGGGRQVEDEESPERGEGVTDFSPLVPEAVGET 108

[Close]

BLAST of IVF0009207 vs. NCBI nr
Match: CAG1854294.1 (unnamed protein product [Musa acuminata subsp. malaccensis])

HSP 1 Score: 62.0 bits (149), Expect = 1.63e-08
Identity = 42/122 (34.43%), Postives = 68/122 (55.74%), Query Frame = 0


Query: 1   MAFGRKNNKQHTTKHPNGNRQRRQNLLRLIRRRRVETVHHILIKQSNSRENQNRHESMQE 60
           MA G ++++Q   ++ N +RQR ++L   +   RV    H+L++Q + RE+  R E M+E
Sbjct: 65  MADGGESDEQSAAENSNPDRQRCEDLKLDVGGHRVVARDHVLVEQRHRREHHQRREGMEE 124

Query: 61  INKPQPILSRDGRRKFHGAVDDPQASESGESIGNIP-LTVSETIRETLKKTRQSTESNEA 120
           + +PQ +     RR    AVDDPQA E G ++ + P   V E + E  ++  +  E  EA
Sbjct: 125 VQRPQSVAHGQLRRYRLQAVDDPQAPERGHAVAHPPGCFVVEAVGEAEEEAGEGAEGQEA 184

[Close]

BLAST of IVF0009207 vs. NCBI nr
Match: KCW74522.1 (hypothetical protein EUGRSUZ_E03237 [Eucalyptus grandis])

HSP 1 Score: 60.5 bits (145), Expect = 3.92e-08
Identity = 33/85 (38.82%), Postives = 59/85 (69.41%), Query Frame = 0


Query: 1  MAFGRKNNKQHTTKHPNGNRQRRQNLLRLIRRRRVETVHHILIKQSNSRENQNRHESMQE 60
          +  GR++++QH+    + +RQRRQ+L  L+R RRVE  HH+L+++ +  ++Q RH+ +++
Sbjct: 15 VPLGREHDEQHSADGSDPHRQRRQHLPSLVRWRRVEAAHHVLVEKRDRPKHQYRHDRVRK 74

Query: 61 INKPQPILSRDGRRKFHGAVDDPQA 85
          + +PQP+L  + RR+    VD PQA
Sbjct: 75 VYEPQPVLILELRRERVQPVDHPQA 99

The following BLAST results are available for this feature:

BLAST of IVF0009207 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0009207 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KK92	5.9e-54	92.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518140 PE=4 SV=1	[more]
A0A2P5CHX1	9.5e-20	52.89	Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_284420 PE=4 SV...	[more]
A0A059C851	6.0e-06	40.24	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_E03237 PE=4 SV...	[more]
A0A484M656	6.0e-06	35.00	Uncharacterized protein OS=Cuscuta campestris OX=132261 GN=CCAM_LOCUS25873 PE=4 ...	[more]
A0A151RHL3	2.3e-05	49.18	Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_036570 PE=4 SV=1	[more]

BLAST of IVF0009207 vs. NCBI nr


Match Name	E-value	Identity	Description
PON60637.1	2.54e-26	52.89	hypothetical protein TorRG33x02_284420 [Trema orientale]	[more]
KYP42008.1	2.60e-09	50.00	hypothetical protein KK1_036570 [Cajanus cajan]	[more]
VFQ84097.1	1.15e-08	37.96	unnamed protein product [Cuscuta campestris]	[more]
CAG1854294.1	1.63e-08	34.43	unnamed protein product [Musa acuminata subsp. malaccensis]	[more]
KCW74522.1	3.92e-08	38.82	hypothetical protein EUGRSUZ_E03237 [Eucalyptus grandis]	[more]

BLAST of IVF0009207 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 107..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..99
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..81

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0009207.1	IVF0009207.1	mRNA