IVF0008376 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGGGTTTAGTATAAAGAGTGGAAACTCCCGTATCATTTTTTGCACGCCCCATTCTGCCTATCAGAGCATCGGTGAGACAAAGCCCTAACGCAAATCAGGTTTCTTCGATTTCTCTCTACGATTTCGTTCGTTTCTTTTAAATTGTCTGTGTTTTCGAAGTAATACTATGCGTATGTATGTTTTTACTCAAGCTAGACTCACTTCGGAGATCTCTTTTTTCATCTATTTGTATCGTTGTTGCAGTGCCAGAAAAAGACGATGGCGGCGGTTCCAGGACAACTAATTTGGGAGATTGTGAAGAGGAACAACTCTTTTTTGGTGAAGGAGTTTGGAAGGGGAACAGCCGGTGTTCAGTTCAGCAAAGAGCCCAACAATTTATACAATCTGAACTCCTACAAGCATTCTGGTTAGTCATCTTAAATCCTCTGATTAGTGAAGTGTTATTTTTCATTTAATGGCAATGCTAGTGGATTAGTTTTGGAAGATCTTGTTTGAACTTCTATACAACCTAGAGACGGGATCGTAAGTATATTATGTCGTTGTTTGAAGGTTTGTCTTTTGGTTTTTTGGTACTGGAGCTAAGGGATTAAGTAGAGGAAATTGAAATATTAGAGTGTTCATTTGCTTTGATTCCCTGAAGTTTTTCAAATGACCAAGCCGCTGCTATGTTATTGTTTGAATTCTTGATGTTCTGCTCAAGTAGAGGTCTAGAATAGATGTGTGAGGGGCCAGCGAACTGATGTATGTGTACGATGTTGTAAATCGTTTGAGATTTCGTTTCTGCAGCATCTGAGAGGGTCTTAGAATAGAAATGATTGCATGATCATTGTGCTTGTTCAATTATTGGTTATGCTATCGGTTCTTTTATTCTTAGATTAGATGTATTCAAGGAATTATTTAGTGATTGGGTTCTTGAATACATCCACCCGTTGCCAATCTATTTGTACTAGAAAACATATTTGAGTATTTACTGTTTTTTTGTCCTTGTTGAACAGTTCGGTTTATTGTCTAATATCTTTTCGAATTTGATTGTTTTAGAACTTAATTAGTAGTGGTGAGAGGAGTTCATGCTTAAGGTTCACTAAGATTCTTGTGTTTTAGGTTTGGCCAACAAGAAAACTGTCACAATTCAGCCTGGAGGCAAAGATCAATCCATTTTGCTTGCAACAACCAAGAGCAAGAAACAGAACAAACCTTCTTCATTGCTTCATAAATCTTTGATGAAGAAAGAGTTCCGTCGGATGGCAAAAGCTGTAACAAACCAGGTATAAACAGCAGAACTTAATTATCTGTTGAGTATGACTTGTCCCTAATAAATACAATGGAAACGGTTGCATTAACTCACTCTTGACTTGAATGATATCAGGTGGCAGACAACTACTACAGGCCAGATCTGAAGAAGGCTGCCTTGGCAAGATTGAGTGCTGTAAACAGGAGCCTCAAGGTTGCTAAGTCTGGTGTTAAGAAGAGGAACAGGCAAGCTTTGAAATCAAAGAAGTGAGATTTAGGAGAATGATAAATGAGATTTTTCGTTTGCCATTGTGTTTTATGTTGGTTGGGATGTCAACTTTTCTAGTTCAGTTTGGAATCTGAAGAATAGTCTTGCTATAGATGTTTTTTTTTTGCTGCGTTTTGCATTATCATATGATTATTTTCTTGATGTGATGAACTTTTGGAACGGAATCTTATGACTTGGTTTCGATGTGTTATTTTAGTTTGTAGTTGAGAATTACTAGA AGGGTTTAGTATAAAGAGTGGAAACTCCCGTATCATTTTTTGCACGCCCCATTCTGCCTATCAGAGCATCGGTGAGACAAAGCCCTAACGCAAATCAGTGCCAGAAAAAGACGATGGCGGCGGTTCCAGGACAACTAATTTGGGAGATTGTGAAGAGGAACAACTCTTTTTTGGTGAAGGAGTTTGGAAGGGGAACAGCCGGTGTTCAGTTCAGCAAAGAGCCCAACAATTTATACAATCTGAACTCCTACAAGCATTCTGGTTTGGCCAACAAGAAAACTGTCACAATTCAGCCTGGAGGCAAAGATCAATCCATTTTGCTTGCAACAACCAAGAGCAAGAAACAGAACAAACCTTCTTCATTGCTTCATAAATCTTTGATGAAGAAAGAGTTCCGTCGGATGGCAAAAGCTGTAACAAACCAGGTGGCAGACAACTACTACAGGCCAGATCTGAAGAAGGCTGCCTTGGCAAGATTGAGTGCTGTAAACAGGAGCCTCAAGGTTGCTAAGTCTGGTGTTAAGAAGAGGAACAGGCAAGCTTTGAAATCAAAGAAGTGAGATTTAGGAGAATGATAAATGAGATTTTTCGTTTGCCATTGTGTTTTATGTTGGTTGGGATGTCAACTTTTCTAGTTCAGTTTGGAATCTGAAGAATAGTCTTGCTATAGATGTTTTTTTTTTGCTGCGTTTTGCATTATCATATGATTATTTTCTTGATGTGATGAACTTTTGGAACGGAATCTTATGACTTGGTTTCGATGTGTTATTTTAGTTTGTAGTTGAGAATTACTAGA ATGGCGGCGGTTCCAGGACAACTAATTTGGGAGATTGTGAAGAGGAACAACTCTTTTTTGGTGAAGGAGTTTGGAAGGGGAACAGCCGGTGTTCAGTTCAGCAAAGAGCCCAACAATTTATACAATCTGAACTCCTACAAGCATTCTGGTTTGGCCAACAAGAAAACTGTCACAATTCAGCCTGGAGGCAAAGATCAATCCATTTTGCTTGCAACAACCAAGAGCAAGAAACAGAACAAACCTTCTTCATTGCTTCATAAATCTTTGATGAAGAAAGAGTTCCGTCGGATGGCAAAAGCTGTAACAAACCAGGTGGCAGACAACTACTACAGGCCAGATCTGAAGAAGGCTGCCTTGGCAAGATTGAGTGCTGTAAACAGGAGCCTCAAGGTTGCTAAGTCTGGTGTTAAGAAGAGGAACAGGCAAGCTTTGAAATCAAAGAAGTGA MAAVPGQLIWEIVKRNNSFLVKEFGRGTAGVQFSKEPNNLYNLNSYKHSGLANKKTVTIQPGGKDQSILLATTKSKKQNKPSSLLHKSLMKKEFRRMAKAVTNQVADNYYRPDLKKAALARLSAVNRSLKVAKSGVKKRNRQALKSKK Homology
BLAST of IVF0008376 vs. ExPASy Swiss-Prot
Match: Q9M0E2 (60S ribosomal protein L28-2 OS=Arabidopsis thaliana OX=3702 GN=RPL28C PE=2 SV=1) HSP 1 Score: 214.5 bits (545), Expect = 7.9e-55 Identity = 108/143 (75.52%), Postives = 124/143 (86.71%), Query Frame = 0
BLAST of IVF0008376 vs. ExPASy Swiss-Prot
Match: O82204 (60S ribosomal protein L28-1 OS=Arabidopsis thaliana OX=3702 GN=RPL28A PE=1 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 1.1e-53 Identity = 107/143 (74.83%), Postives = 125/143 (87.41%), Query Frame = 0
BLAST of IVF0008376 vs. ExPASy Swiss-Prot
Match: Q962T2 (60S ribosomal protein L28 OS=Spodoptera frugiperda OX=7108 GN=RpL28 PE=2 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 2.6e-13 Identity = 49/127 (38.58%), Postives = 68/127 (53.54%), Query Frame = 0
BLAST of IVF0008376 vs. ExPASy Swiss-Prot
Match: P46779 (60S ribosomal protein L28 OS=Homo sapiens OX=9606 GN=RPL28 PE=1 SV=3) HSP 1 Score: 71.6 bits (174), Expect = 8.2e-12 Identity = 44/139 (31.65%), Postives = 78/139 (56.12%), Query Frame = 0
BLAST of IVF0008376 vs. ExPASy Swiss-Prot
Match: P41105 (60S ribosomal protein L28 OS=Mus musculus OX=10090 GN=Rpl28 PE=1 SV=2) HSP 1 Score: 71.2 bits (173), Expect = 1.1e-11 Identity = 44/139 (31.65%), Postives = 78/139 (56.12%), Query Frame = 0
BLAST of IVF0008376 vs. ExPASy TrEMBL
Match: A0A1S3BIE3 (60S ribosomal protein L28-2-like OS=Cucumis melo OX=3656 GN=LOC103490001 PE=3 SV=1) HSP 1 Score: 280.0 bits (715), Expect = 5.6e-72 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of IVF0008376 vs. ExPASy TrEMBL
Match: A0A5D3BXS0 (60S ribosomal protein L28-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G001760 PE=3 SV=1) HSP 1 Score: 280.0 bits (715), Expect = 5.6e-72 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of IVF0008376 vs. ExPASy TrEMBL
Match: A0A0A0LIG3 (Ribosomal_L28e domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G849920 PE=3 SV=1) HSP 1 Score: 274.6 bits (701), Expect = 2.4e-70 Identity = 146/148 (98.65%), Postives = 146/148 (98.65%), Query Frame = 0
BLAST of IVF0008376 vs. ExPASy TrEMBL
Match: A0A6J1D200 (60S ribosomal protein L28-2-like OS=Momordica charantia OX=3673 GN=LOC111016861 PE=3 SV=1) HSP 1 Score: 270.8 bits (691), Expect = 3.4e-69 Identity = 142/145 (97.93%), Postives = 144/145 (99.31%), Query Frame = 0
BLAST of IVF0008376 vs. ExPASy TrEMBL
Match: A0A6J1K7P5 (60S ribosomal protein L28-2-like OS=Cucurbita maxima OX=3661 GN=LOC111493014 PE=3 SV=1) HSP 1 Score: 268.1 bits (684), Expect = 2.2e-68 Identity = 141/147 (95.92%), Postives = 143/147 (97.28%), Query Frame = 0
BLAST of IVF0008376 vs. NCBI nr
Match: XP_008447584.1 (PREDICTED: 60S ribosomal protein L28-2-like [Cucumis melo] >XP_008447585.1 PREDICTED: 60S ribosomal protein L28-2-like [Cucumis melo] >XP_008447586.1 PREDICTED: 60S ribosomal protein L28-2-like [Cucumis melo] >KAA0061117.1 60S ribosomal protein L28-2-like [Cucumis melo var. makuwa] >TYK03788.1 60S ribosomal protein L28-2-like [Cucumis melo var. makuwa]) HSP 1 Score: 279 bits (714), Expect = 1.91e-94 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of IVF0008376 vs. NCBI nr
Match: XP_004146830.1 (60S ribosomal protein L28-2 [Cucumis sativus] >KGN59836.1 hypothetical protein Csa_000918 [Cucumis sativus]) HSP 1 Score: 274 bits (700), Expect = 2.61e-92 Identity = 146/148 (98.65%), Postives = 146/148 (98.65%), Query Frame = 0
BLAST of IVF0008376 vs. NCBI nr
Match: XP_038886678.1 (60S ribosomal protein L28-2-like [Benincasa hispida]) HSP 1 Score: 274 bits (700), Expect = 2.79e-92 Identity = 145/146 (99.32%), Postives = 145/146 (99.32%), Query Frame = 0
BLAST of IVF0008376 vs. NCBI nr
Match: XP_022148100.1 (60S ribosomal protein L28-2-like [Momordica charantia]) HSP 1 Score: 270 bits (690), Expect = 8.16e-91 Identity = 142/144 (98.61%), Postives = 143/144 (99.31%), Query Frame = 0
BLAST of IVF0008376 vs. NCBI nr
Match: XP_022949503.1 (60S ribosomal protein L28-2-like [Cucurbita moschata] >XP_022998347.1 60S ribosomal protein L28-2-like [Cucurbita maxima] >XP_023523885.1 60S ribosomal protein L28-2-like [Cucurbita pepo subsp. pepo] >KAG7036445.1 60S ribosomal protein L28-2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 267 bits (683), Expect = 1.09e-89 Identity = 141/146 (96.58%), Postives = 142/146 (97.26%), Query Frame = 0
BLAST of IVF0008376 vs. TAIR 10
Match: AT4G29410.1 (Ribosomal L28e protein family ) HSP 1 Score: 214.5 bits (545), Expect = 5.6e-56 Identity = 108/143 (75.52%), Postives = 124/143 (86.71%), Query Frame = 0
BLAST of IVF0008376 vs. TAIR 10
Match: AT4G29410.2 (Ribosomal L28e protein family ) HSP 1 Score: 214.5 bits (545), Expect = 5.6e-56 Identity = 108/143 (75.52%), Postives = 124/143 (86.71%), Query Frame = 0
BLAST of IVF0008376 vs. TAIR 10
Match: AT2G19730.1 (Ribosomal L28e protein family ) HSP 1 Score: 210.7 bits (535), Expect = 8.1e-55 Identity = 107/143 (74.83%), Postives = 125/143 (87.41%), Query Frame = 0
BLAST of IVF0008376 vs. TAIR 10
Match: AT2G19730.2 (Ribosomal L28e protein family ) HSP 1 Score: 210.7 bits (535), Expect = 8.1e-55 Identity = 107/143 (74.83%), Postives = 125/143 (87.41%), Query Frame = 0
BLAST of IVF0008376 vs. TAIR 10
Match: AT2G19730.3 (Ribosomal L28e protein family ) HSP 1 Score: 210.7 bits (535), Expect = 8.1e-55 Identity = 107/143 (74.83%), Postives = 125/143 (87.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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