IVF0008152 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCCTTTTCATAATTTCCCTTCCAAATTATTTAGTTCATAATTATATGTCAAGAACTCGTATCCCTCTCCAAGCAAATCCATTGTTTCTTAGGTAAAACTAATCTTCCCTCTTTTCCTCGGTTTGATTCCGTTATTCTTATATATGTAGCGTTCATCATCTCTTAATCGTGGGTATATGTCTAAATCAATTAAGAGTCGGTTTAGATTAACTTTATATTATTTAAAATAGGTTAACTATAGATTCGGTCCAAACACGGATTAAACTATAATAACGTACGTGCTACACAAACTTTGTCTTGGTTGATCTAATAAACATCCATTTTATAAGAGGGAGTGGTTGTGGAATTAGAAAGTCTATATGAAAAAAAGAAAGTGGTTGTGGAAAAGAAAAAAGTAGTGTATGAGAAAGTGGTTGGAAAAAGAAAGTGGATGAGAAAAAAGTTCAACTTTTTTTTCCCTTCTTTGCTGCTTCTTTTTTAAACATAGTTCTCATTTCACCATTTCAAGTATGATTGGGTTATTTTTTATTTTACTCATAGTGCTTTTGGGGATTACTAAAAGGGAATTTTTTGTTGGGATGAAAGTTTAGTTTCCACTCAAAATTGATTTTAAGAGTTGAAAATAGTGTTTTATGAAAAAGTATAGTATGAGGTTTCAGCTTAAGTGCTTCACAAAAAAAGAAAAAAAGAAAAAAAAAGAGAGGCATTTTTCAATTTAAATTAAATTAATTAGCATGCAATTAATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATATGTTGAATTGAAAAAAAATTGTAAATATAATAAATTTATTATCGAGGGGCATTTTCAAATGTAACAAAATTTCAAATCCATCTAATTGGTGATATTGATATACATGAATGGATAAAAGGATATCTATCATCAATAGAATTTTGAATGACCCACGGATGAATTATATGACAGGAAAATGAAGCAATTGAAACGGCAATTCAGGAGCCTTGTAATTGATTCCACAAGCCAACAAGTCCTAAATAAAAAAGATGATGAGACAGAAACCAAGTCATTGCCCTATAACTCTTCCACTTGGGTGCCTCATCCTCGCACTGGAATTTACTTCCCTCAAGGTCATGAGTGGGTCATGAAGGACATCCCCGAGAATGCAGCTTCCTTCTCTCGACTTTGTTGGTTTCGGGATTCTGATGATGTCGACGACTTGAACCATGAAAACAATACCTCTTCGAGGTCTTGATTTGCCTTTGTTTTTAGGGGTCGGGATTGAGCCTTATTAGGAAAGAAGGTTGTCAATGGAACAATGAAAACGATGTATTAATGGCTTGACAACGTATTGCTTGTGAGCTTTTGTTGATAAGAGAGACCCAAATTGACATTGGAATAATGTAAATTAGTTTACTACATATAGGTAAACTATCGAACAATAAAATGAAG GCCTTTTCATAATTTCCCTTCCAAATTATTTAGTTCATAATTATATGTCAAGAACTCGTATCCCTCTCCAAGCAAATCCATTGTTTCTTAGGAAAATGAAGCAATTGAAACGGCAATTCAGGAGCCTTGTAATTGATTCCACAAGCCAACAAGTCCTAAATAAAAAAGATGATGAGACAGAAACCAAGTCATTGCCCTATAACTCTTCCACTTGGGTGCCTCATCCTCGCACTGGAATTTACTTCCCTCAAGGTCATGAGTGGGTCATGAAGGACATCCCCGAGAATGCAGCTTCCTTCTCTCGACTTTGTTGGTTTCGGGATTCTGATGATGTCGACGACTTGAACCATGAAAACAATACCTCTTCGAGGTCTTGATTTGCCTTTGTTTTTAGGGGTCGGGATTGAGCCTTATTAGGAAAGAAGGTTGTCAATGGAACAATGAAAACGATGTATTAATGGCTTGACAACGTATTGCTTGTGAGCTTTTGTTGATAAGAGAGACCCAAATTGACATTGGAATAATGTAAATTAGTTTACTACATATAGGTAAACTATCGAACAATAAAATGAAG ATGTCAAGAACTCGTATCCCTCTCCAAGCAAATCCATTGTTTCTTAGGAAAATGAAGCAATTGAAACGGCAATTCAGGAGCCTTGTAATTGATTCCACAAGCCAACAAGTCCTAAATAAAAAAGATGATGAGACAGAAACCAAGTCATTGCCCTATAACTCTTCCACTTGGGTGCCTCATCCTCGCACTGGAATTTACTTCCCTCAAGGTCATGAGTGGGTCATGAAGGACATCCCCGAGAATGCAGCTTCCTTCTCTCGACTTTGTTGGTTTCGGGATTCTGATGATGTCGACGACTTGAACCATGAAAACAATACCTCTTCGAGGTCTTGA MSRTRIPLQANPLFLRKMKQLKRQFRSLVIDSTSQQVLNKKDDETETKSLPYNSSTWVPHPRTGIYFPQGHEWVMKDIPENAASFSRLCWFRDSDDVDDLNHENNTSSRS Homology
BLAST of IVF0008152 vs. ExPASy TrEMBL
Match: A0A1S3C0N8 (uncharacterized protein LOC103495298 OS=Cucumis melo OX=3656 GN=LOC103495298 PE=4 SV=1) HSP 1 Score: 226.9 bits (577), Expect = 4.2e-56 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0
BLAST of IVF0008152 vs. ExPASy TrEMBL
Match: A0A0A0K7S0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071500 PE=4 SV=1) HSP 1 Score: 196.1 bits (497), Expect = 7.9e-47 Identity = 94/105 (89.52%), Postives = 98/105 (93.33%), Query Frame = 0
BLAST of IVF0008152 vs. ExPASy TrEMBL
Match: A0A5D3C8X8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001120 PE=4 SV=1) HSP 1 Score: 195.3 bits (495), Expect = 1.4e-46 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0
BLAST of IVF0008152 vs. ExPASy TrEMBL
Match: A0A6J1D3R9 (uncharacterized protein LOC111017332 OS=Momordica charantia OX=3673 GN=LOC111017332 PE=4 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 5.2e-30 Identity = 65/100 (65.00%), Postives = 82/100 (82.00%), Query Frame = 0
BLAST of IVF0008152 vs. ExPASy TrEMBL
Match: A0A6J1JN70 (uncharacterized protein LOC111486209 OS=Cucurbita maxima OX=3661 GN=LOC111486209 PE=4 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 1.1e-27 Identity = 68/107 (63.55%), Postives = 80/107 (74.77%), Query Frame = 0
BLAST of IVF0008152 vs. NCBI nr
Match: XP_008455025.1 (PREDICTED: uncharacterized protein LOC103495298 [Cucumis melo]) HSP 1 Score: 226 bits (577), Expect = 8.89e-75 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0
BLAST of IVF0008152 vs. NCBI nr
Match: XP_011658881.1 (uncharacterized protein LOC105436102 [Cucumis sativus] >KAE8645844.1 hypothetical protein Csa_017261 [Cucumis sativus]) HSP 1 Score: 202 bits (515), Expect = 2.56e-65 Identity = 98/110 (89.09%), Postives = 102/110 (92.73%), Query Frame = 0
BLAST of IVF0008152 vs. NCBI nr
Match: KAA0031357.1 (uncharacterized protein E6C27_scaffold139G001120 [Cucumis melo var. makuwa] >TYK06809.1 uncharacterized protein E5676_scaffold13G001120 [Cucumis melo var. makuwa]) HSP 1 Score: 196 bits (497), Expect = 8.32e-63 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0
BLAST of IVF0008152 vs. NCBI nr
Match: XP_038887565.1 (uncharacterized protein LOC120077680 [Benincasa hispida]) HSP 1 Score: 173 bits (438), Expect = 1.94e-53 Identity = 82/109 (75.23%), Postives = 95/109 (87.16%), Query Frame = 0
BLAST of IVF0008152 vs. NCBI nr
Match: XP_022148740.1 (uncharacterized protein LOC111017332 [Momordica charantia]) HSP 1 Score: 140 bits (353), Expect = 6.14e-40 Identity = 65/99 (65.66%), Postives = 81/99 (81.82%), Query Frame = 0
BLAST of IVF0008152 vs. TAIR 10
Match: AT3G19550.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; Has 36 Blast hits to 36 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 63.5 bits (153), Expect = 1.2e-10 Identity = 43/108 (39.81%), Postives = 53/108 (49.07%), Query Frame = 0
BLAST of IVF0008152 vs. TAIR 10
Match: AT1G73120.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; EXPRESSED IN: root, cultured cell; Has 36 Blast hits to 36 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 43.9 bits (102), Expect = 9.7e-05 Identity = 16/26 (61.54%), Postives = 22/26 (84.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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