IVF0007082 (gene) Melon (IVF77) v1

Overview
NameIVF0007082
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionProtein MNN4-like
Locationchr08: 19455663 .. 19456199 (+)
RNA-Seq ExpressionIVF0007082
SyntenyIVF0007082
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGCAAACGGAATTTGAAAGGGTGGTAAATAAAGCCCAAGAAAAAACGGAGAAAGTTAGAGCTAGGCTTCTCAAAATTAAGGTAAAGGCACAAAGAGCTATGGCCTTAGCCGAAGGAAAGAAAGAGATTAAGTTGAGGCAGCCAGAAGAGCTCCTCAACAAGGTGGATAAATTGGCCCTCTCTGTGGAGAAGGGTAAGGAAAAAGAAAAGACCTTCGAGGAATTTTACAAGGAATTTGAGAAGGAGATAGACGAATTTAGTCCTTTGGAGGACAATGTGGTGGAAAGACCTGCAAAGAAGAGAAATGTTACAATGAAAAAGAAGGTCTTGAGAGATCAATTTGCCAAGAGGCGAAAAGAAAAGAAAAGAAGAGGTCCTCAGAAAGAGAGTGAAAAAGAGGTCGAGAGAAGTGAAAAAGAAGGGTCCCTCTCCGAGAGACATGTTAGCATACTGTTCATGAGAGAGAAGGGACTCTACCCTTACAAGAGGAACATGTCTCAATTTCTCGAAGCACCCATTAGGGTATTTAGATGA

mRNA sequence

ATGGTGCAAACGGAATTTGAAAGGGTGGTAAATAAAGCCCAAGAAAAAACGGAGAAAGTTAGAGCTAGGCTTCTCAAAATTAAGGTAAAGGCACAAAGAGCTATGGCCTTAGCCGAAGGAAAGAAAGAGATTAAGTTGAGGCAGCCAGAAGAGCTCCTCAACAAGGTGGATAAATTGGCCCTCTCTGTGGAGAAGGGTAAGGAAAAAGAAAAGACCTTCGAGGAATTTTACAAGGAATTTGAGAAGGAGATAGACGAATTTAGTCCTTTGGAGGACAATGTGGTGGAAAGACCTGCAAAGAAGAGAAATGTTACAATGAAAAAGAAGGTCTTGAGAGATCAATTTGCCAAGAGGCGAAAAGAAAAGAAAAGAAGAGGTCCTCAGAAAGAGAGTGAAAAAGAGGTCGAGAGAAGTGAAAAAGAAGGGTCCCTCTCCGAGAGACATGTTAGCATACTGTTCATGAGAGAGAAGGGACTCTACCCTTACAAGAGGAACATGTCTCAATTTCTCGAAGCACCCATTAGGGTATTTAGATGA

Coding sequence (CDS)

ATGGTGCAAACGGAATTTGAAAGGGTGGTAAATAAAGCCCAAGAAAAAACGGAGAAAGTTAGAGCTAGGCTTCTCAAAATTAAGGTAAAGGCACAAAGAGCTATGGCCTTAGCCGAAGGAAAGAAAGAGATTAAGTTGAGGCAGCCAGAAGAGCTCCTCAACAAGGTGGATAAATTGGCCCTCTCTGTGGAGAAGGGTAAGGAAAAAGAAAAGACCTTCGAGGAATTTTACAAGGAATTTGAGAAGGAGATAGACGAATTTAGTCCTTTGGAGGACAATGTGGTGGAAAGACCTGCAAAGAAGAGAAATGTTACAATGAAAAAGAAGGTCTTGAGAGATCAATTTGCCAAGAGGCGAAAAGAAAAGAAAAGAAGAGGTCCTCAGAAAGAGAGTGAAAAAGAGGTCGAGAGAAGTGAAAAAGAAGGGTCCCTCTCCGAGAGACATGTTAGCATACTGTTCATGAGAGAGAAGGGACTCTACCCTTACAAGAGGAACATGTCTCAATTTCTCGAAGCACCCATTAGGGTATTTAGATGA

Protein sequence

MVQTEFERVVNKAQEKTEKVRARLLKIKVKAQRAMALAEGKKEIKLRQPEELLNKVDKLALSVEKGKEKEKTFEEFYKEFEKEIDEFSPLEDNVVERPAKKRNVTMKKKVLRDQFAKRRKEKKRRGPQKESEKEVERSEKEGSLSERHVSILFMREKGLYPYKRNMSQFLEAPIRVFR
Homology
BLAST of IVF0007082 vs. ExPASy TrEMBL
Match: A0A5A7TGV4 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G00910 PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 3.8e-83
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0

Query: 1   MVQTEFERVVNKAQEKTEKVRARLLKIKVKAQRAMALAEGKKEIKLRQPEELLNKVDKLA 60
           MVQTEFERVVNKAQEKTEKVRARLLKIKVKAQRAMALAEGKKEIKLRQPEELLNKVDKLA
Sbjct: 1   MVQTEFERVVNKAQEKTEKVRARLLKIKVKAQRAMALAEGKKEIKLRQPEELLNKVDKLA 60

Query: 61  LSVEKGKEKEKTFEEFYKEFEKEIDEFSPLEDNVVERPAKKRNVTMKKKVLRDQFAKRRK 120
           LSVEKGKEKEKTFEEFYKEFEKEIDEFSPLEDNVVERPAKKRNVTMKKKVLRDQFAKRRK
Sbjct: 61  LSVEKGKEKEKTFEEFYKEFEKEIDEFSPLEDNVVERPAKKRNVTMKKKVLRDQFAKRRK 120

Query: 121 EKKRRGPQKESEKEVERSEKEGSLSERHVSILFMREKGLYPYKRNMSQFLEAPIRVFR 179
           EKKRRGPQKESEKEVERSEKEGSLSERHVSILFMREKGLYPYKRNMSQFLEAPIRVFR
Sbjct: 121 EKKRRGPQKESEKEVERSEKEGSLSERHVSILFMREKGLYPYKRNMSQFLEAPIRVFR 178

BLAST of IVF0007082 vs. ExPASy TrEMBL
Match: A0A5D3BFC8 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G00900 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.0e-19
Identity = 62/92 (67.39%), Postives = 76/92 (82.61%), Query Frame = 0

Query: 1   MVQTEFERVVNKAQEKTEKVRARLLKIKVKAQRAMALAEGKKEIKLRQPEELLNKVDKLA 60
           + + +F+RV  KAQ++ EKV+ RLLKIKVKAQ   ALAE KKEIKL++ +ELLNKV+KLA
Sbjct: 126 IAKIKFDRVSRKAQKEKEKVKTRLLKIKVKAQGVKALAEEKKEIKLKEQKELLNKVNKLA 185

Query: 61  LSVEKGKEKEKTFEEFYKEFEKEIDEFSPLED 93
           LSVE  KEKEKTFEE+ +EFEKEI E SPL+D
Sbjct: 186 LSVENSKEKEKTFEEYCEEFEKEISELSPLKD 217

BLAST of IVF0007082 vs. ExPASy TrEMBL
Match: A0A5D3DX47 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G00690 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.8e-19
Identity = 81/164 (49.39%), Postives = 104/164 (63.41%), Query Frame = 0

Query: 8   RVVNKAQEKTEKVRARLLKIKVKAQRAMALAEGKKEIKLRQPEELLNKVDKLALSVEKGK 67
           +V  K  +KTEK++  LLKIKVKAQ   ALAE KK   LR+ EELLN+VDK+AL V K K
Sbjct: 15  KVARKPLKKTEKLKKWLLKIKVKAQCVKALAEEKKGSMLREREELLNEVDKMALLVNKSK 74

Query: 68  EKEKTFEEFYKEFEKEIDEFSPLEDNVVERPAKKRNVTMKKKVLRDQFAKRRKEKKRRGP 127
            KEKT + + KEFEKE++EF  LED VVE+  K      KKK    Q A +R++K ++  
Sbjct: 75  GKEKTIDGYDKEFEKELEEFISLEDGVVEKQPK------KKKASEGQDATKREKKNKKAQ 134

Query: 128 QKESEKEVERSEKEGSLSERHVSILFMREKGLYPYKRNMSQFLE 172
           Q   EKE + SE +G LS   +   FM EKGL+P K  +  FL+
Sbjct: 135 Q---EKESQESE-QGVLSIEELGKHFMIEKGLFPVKGQLPSFLD 168

BLAST of IVF0007082 vs. ExPASy TrEMBL
Match: A0A5D3C2J1 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold572G00380 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.5e-18
Identity = 69/128 (53.91%), Postives = 89/128 (69.53%), Query Frame = 0

Query: 25  LKIKVKAQRAMALAEGKKEIKLRQPEELLNKVDKLALSVEKGKEKEKTFEEFYKEFEKEI 84
           ++IKVK      LA+ KKEI+LR+ EELL KV+K+A+  EKGK +EKTFEE Y+EFEKEI
Sbjct: 55  VEIKVKTYGVKTLAQKKKEIRLREQEELLGKVEKVAIFAEKGKGEEKTFEEHYEEFEKEI 114

Query: 85  DEFSPLEDNVVERPAKKRNVTMKKKVLRDQFAKRRKEKKRRGPQKESEKEVERSEKEGSL 144
           +E  PLED  + RPA KR + MKKK LR++FA  + EK +R P+K+ E+  E SE     
Sbjct: 115 NELIPLEDKAI-RPATKRKIMMKKKALREKFANGQVEKLKRKPKKDEEEVSEESE----- 174

Query: 145 SERHVSIL 153
           SE H  IL
Sbjct: 175 SEEHSPIL 176

BLAST of IVF0007082 vs. ExPASy TrEMBL
Match: A0A5A7TZE0 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001090 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 1.9e-18
Identity = 79/178 (44.38%), Postives = 105/178 (58.99%), Query Frame = 0

Query: 1   MVQTEFERVVNKAQEKTEKVRARLLKIKVKAQRAMALAEGKKEIKLRQPEELLNKVDKLA 60
           +V++EF +V  KAQEKTEK++ RLLKIKVKAQ   ALAE KKE                 
Sbjct: 9   IVESEFYKVARKAQEKTEKLKKRLLKIKVKAQGVKALAEEKKE----------------- 68

Query: 61  LSVEKGKEKEKTFEEFYKEFEKEIDEFSPLEDNVVERPAKKRNVTMKKKVLRDQFAKRRK 120
                   KEKT +E+ KEFEKE++E SPLED VVE+  K      KK+VL  Q A +R 
Sbjct: 69  -------RKEKTTDEYSKEFEKELEELSPLEDRVVEKQPK------KKRVLEGQDAMKR- 128

Query: 121 EKKRRGPQKESEKEVERSEKEGSLSERHVSILFMREKGLYPYKRNMSQFLEAPIRVFR 179
           EKK +  Q+E E   ++SE+EG L    +   FM EKG++P+K  +  FL +PI+  +
Sbjct: 129 EKKNKTVQREQES--QKSEQEGVLFAEELGKHFMIEKGIFPFKGQLPLFLTSPIKALK 153

BLAST of IVF0007082 vs. NCBI nr
Match: KAA0041276.1 (protein MNN4-like [Cucumis melo var. makuwa] >TYK16072.1 protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 318 bits (814), Expect = 1.03e-108
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0

Query: 1   MVQTEFERVVNKAQEKTEKVRARLLKIKVKAQRAMALAEGKKEIKLRQPEELLNKVDKLA 60
           MVQTEFERVVNKAQEKTEKVRARLLKIKVKAQRAMALAEGKKEIKLRQPEELLNKVDKLA
Sbjct: 1   MVQTEFERVVNKAQEKTEKVRARLLKIKVKAQRAMALAEGKKEIKLRQPEELLNKVDKLA 60

Query: 61  LSVEKGKEKEKTFEEFYKEFEKEIDEFSPLEDNVVERPAKKRNVTMKKKVLRDQFAKRRK 120
           LSVEKGKEKEKTFEEFYKEFEKEIDEFSPLEDNVVERPAKKRNVTMKKKVLRDQFAKRRK
Sbjct: 61  LSVEKGKEKEKTFEEFYKEFEKEIDEFSPLEDNVVERPAKKRNVTMKKKVLRDQFAKRRK 120

Query: 121 EKKRRGPQKESEKEVERSEKEGSLSERHVSILFMREKGLYPYKRNMSQFLEAPIRVFR 178
           EKKRRGPQKESEKEVERSEKEGSLSERHVSILFMREKGLYPYKRNMSQFLEAPIRVFR
Sbjct: 121 EKKRRGPQKESEKEVERSEKEGSLSERHVSILFMREKGLYPYKRNMSQFLEAPIRVFR 178

BLAST of IVF0007082 vs. NCBI nr
Match: KAA0048466.1 (protein MNN4-like [Cucumis melo var. makuwa] >TYK28263.1 protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 107 bits (268), Expect = 9.50e-26
Identity = 81/165 (49.09%), Postives = 104/165 (63.03%), Query Frame = 0

Query: 8   RVVNKAQEKTEKVRARLLKIKVKAQRAMALAEGKKEIKLRQPEELLNKVDKLALSVEKGK 67
           +V  K  +KTEK++  LLKIKVKAQ   ALAE KK   LR+ EELLN+VDK+AL V K K
Sbjct: 15  KVARKPLKKTEKLKKWLLKIKVKAQCVKALAEEKKGSMLREREELLNEVDKMALLVNKSK 74

Query: 68  EKEKTFEEFYKEFEKEIDEFSPLEDNVVERPAKKRNVTMKKKVLRDQFAKRRKEKKRRGP 127
            KEKT + + KEFEKE++EF  LED VVE+  KK      KK    Q A +R++K ++  
Sbjct: 75  GKEKTIDGYDKEFEKELEEFISLEDGVVEKQPKK------KKASEGQDATKREKKNKKAQ 134

Query: 128 QKESEKEVERSEKEGSLSERHVSILFMREKGLYPYKRNMSQFLEA 172
           Q   EKE + SE +G LS   +   FM EKGL+P K  +  FL+ 
Sbjct: 135 Q---EKESQESE-QGVLSIEELGKHFMIEKGLFPVKGQLPSFLDV 169

BLAST of IVF0007082 vs. NCBI nr
Match: TYJ97774.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 106 bits (265), Expect = 6.03e-25
Identity = 62/87 (71.26%), Postives = 73/87 (83.91%), Query Frame = 0

Query: 6   FERVVNKAQEKTEKVRARLLKIKVKAQRAMALAEGKKEIKLRQPEELLNKVDKLALSVEK 65
           F+RV  KAQ++ EKV+ RLLKIKVKAQ   ALAE KKEIKL++ +ELLNKV+KLALSVE 
Sbjct: 131 FDRVSRKAQKEKEKVKTRLLKIKVKAQGVKALAEEKKEIKLKEQKELLNKVNKLALSVEN 190

Query: 66  GKEKEKTFEEFYKEFEKEIDEFSPLED 92
            KEKEKTFEE+ +EFEKEI E SPL+D
Sbjct: 191 SKEKEKTFEEYCEEFEKEISELSPLKD 217

BLAST of IVF0007082 vs. NCBI nr
Match: KAA0066500.1 (protein MNN4-like [Cucumis melo var. makuwa] >TYK06141.1 protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 103 bits (256), Expect = 5.34e-24
Identity = 69/128 (53.91%), Postives = 89/128 (69.53%), Query Frame = 0

Query: 25  LKIKVKAQRAMALAEGKKEIKLRQPEELLNKVDKLALSVEKGKEKEKTFEEFYKEFEKEI 84
           ++IKVK      LA+ KKEI+LR+ EELL KV+K+A+  EKGK +EKTFEE Y+EFEKEI
Sbjct: 55  VEIKVKTYGVKTLAQKKKEIRLREQEELLGKVEKVAIFAEKGKGEEKTFEEHYEEFEKEI 114

Query: 85  DEFSPLEDNVVERPAKKRNVTMKKKVLRDQFAKRRKEKKRRGPQKESEKEVERSEKEGSL 144
           +E  PLED  + RPA KR + MKKK LR++FA  + EK +R P+K+ E+  E SE     
Sbjct: 115 NELIPLEDKAI-RPATKRKIMMKKKALREKFANGQVEKLKRKPKKDEEEVSEESE----- 174

Query: 145 SERHVSIL 152
           SE H  IL
Sbjct: 175 SEEHSPIL 176

BLAST of IVF0007082 vs. NCBI nr
Match: TYK29046.1 (hypothetical protein E5676_scaffold120G001640 [Cucumis melo var. makuwa])

HSP 1 Score: 101 bits (251), Expect = 6.12e-24
Identity = 56/71 (78.87%), Postives = 62/71 (87.32%), Query Frame = 0

Query: 108 KKVLRDQFAKRRKEKKRRGPQKESEKEVERSEKEGSLSERHVSILFMREKGLYPYKRNMS 167
           KKVLR+QFAKRR+EK+RRGPQKESEKE E+SEKEGSLSERHVS+LFM EKGLY Y  NM 
Sbjct: 2   KKVLREQFAKRREEKERRGPQKESEKEDEQSEKEGSLSERHVSVLFMIEKGLYIYMGNMP 61

Query: 168 QFLEAPIRVFR 178
           +FL APIR  R
Sbjct: 62  EFLVAPIRALR 72

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TGV43.8e-83100.00Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G009... [more]
A0A5D3BFC81.0e-1967.39Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G0... [more]
A0A5D3DX471.8e-1949.39Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G00... [more]
A0A5D3C2J11.5e-1853.91Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold572G00... [more]
A0A5A7TZE01.9e-1844.38Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G00... [more]
Match NameE-valueIdentityDescription
KAA0041276.11.03e-108100.00protein MNN4-like [Cucumis melo var. makuwa] >TYK16072.1 protein MNN4-like [Cucu... [more]
KAA0048466.19.50e-2649.09protein MNN4-like [Cucumis melo var. makuwa] >TYK28263.1 protein MNN4-like [Cucu... [more]
TYJ97774.16.03e-2571.26protein MNN4-like [Cucumis melo var. makuwa][more]
KAA0066500.15.34e-2453.91protein MNN4-like [Cucumis melo var. makuwa] >TYK06141.1 protein MNN4-like [Cucu... [more]
TYK29046.16.12e-2478.87hypothetical protein E5676_scaffold120G001640 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..144
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..124
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 98..144

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0007082.2IVF0007082.2mRNA