IVF0006906 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTCAAGAAGAAAAAGAAACTATGAAAAATGCGGCCTATGATGCCAAAGTTTTAAACCTAAGTGACAATGTTCTTAGGGAGGCCATTGGTGAAGAAATAACTTATGGAATGTGAAAGAAATTGGAAGAACTTTATCAGTCTACAGACTTACCTAACCGTGCATACGTGAGGGAGAGGTTATTTACCTTCAAGATGGATGGCAACAAATCTTTGACAGAGAATCTTGAAGAATTCAAGAAGTTGTCTTCAGATTTCAGAGAATGGGAGACAAATTGGTGA ATGACTCAAGAAGAAAAAGAAACTATGAAAAATGCGGCCTATGATGCCAAAGTTTTAAACCTAAGTGACAATGTTCTTAGGGAGGCCATTGAACTTTATCAGTCTACAGACTTACCTAACCGTGCATACGTGAGGGAGAGGTTATTTACCTTCAAGATGGATGGCAACAAATCTTTGACAGAGAATCTTGAAGAATTCAAGAAGTTGTCTTCAGATTTCAGAGAATGGGAGACAAATTGGTGA ATGACTCAAGAAGAAAAAGAAACTATGAAAAATGCGGCCTATGATGCCAAAGTTTTAAACCTAAGTGACAATGTTCTTAGGGAGGCCATTGAACTTTATCAGTCTACAGACTTACCTAACCGTGCATACGTGAGGGAGAGGTTATTTACCTTCAAGATGGATGGCAACAAATCTTTGACAGAGAATCTTGAAGAATTCAAGAAGTTGTCTTCAGATTTCAGAGAATGGGAGACAAATTGGTGA MTQEEKETMKNAAYDAKVLNLSDNVLREAIELYQSTDLPNRAYVRERLFTFKMDGNKSLTENLEEFKKLSSDFREWETNW Homology
BLAST of IVF0006906 vs. ExPASy TrEMBL
Match: A0A5A7V6Z9 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold616G00070 PE=4 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 1.5e-23 Identity = 66/88 (75.00%), Postives = 67/88 (76.14%), Query Frame = 0
BLAST of IVF0006906 vs. ExPASy TrEMBL
Match: A0A5D3BAU2 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold506G00010 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 2.7e-20 Identity = 60/88 (68.18%), Postives = 64/88 (72.73%), Query Frame = 0
BLAST of IVF0006906 vs. ExPASy TrEMBL
Match: A0A5A7V1L8 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold896G00060 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 1.5e-18 Identity = 58/87 (66.67%), Postives = 62/87 (71.26%), Query Frame = 0
BLAST of IVF0006906 vs. ExPASy TrEMBL
Match: A0A5D3DXZ1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold289G00130 PE=4 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 2.4e-16 Identity = 52/80 (65.00%), Postives = 57/80 (71.25%), Query Frame = 0
BLAST of IVF0006906 vs. ExPASy TrEMBL
Match: A0A5D3CAI4 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1503G00330 PE=4 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 7.9e-12 Identity = 39/45 (86.67%), Postives = 40/45 (88.89%), Query Frame = 0
BLAST of IVF0006906 vs. NCBI nr
Match: KAA0063883.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]) HSP 1 Score: 119 bits (298), Expect = 2.17e-32 Identity = 66/88 (75.00%), Postives = 67/88 (76.14%), Query Frame = 0
BLAST of IVF0006906 vs. NCBI nr
Match: TYJ96960.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]) HSP 1 Score: 108 bits (270), Expect = 1.17e-28 Identity = 60/88 (68.18%), Postives = 64/88 (72.73%), Query Frame = 0
BLAST of IVF0006906 vs. NCBI nr
Match: KAA0059755.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYJ99769.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]) HSP 1 Score: 103 bits (256), Expect = 1.16e-26 Identity = 58/87 (66.67%), Postives = 62/87 (71.26%), Query Frame = 0
BLAST of IVF0006906 vs. NCBI nr
Match: TYK28110.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]) HSP 1 Score: 95.1 bits (235), Expect = 2.49e-23 Identity = 52/80 (65.00%), Postives = 57/80 (71.25%), Query Frame = 0
BLAST of IVF0006906 vs. NCBI nr
Match: KAA0049584.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK15944.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]) HSP 1 Score: 80.5 bits (197), Expect = 9.47e-18 Identity = 47/79 (59.49%), Postives = 54/79 (68.35%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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