IVF0006841 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAAATCGGTCTTCCGTCGTTGAATCCTCAAAGAAATCGGAACCGAACGACAGAAATGATTATACCTCCGATTGAATCAAGCAGGGAATTCGCTTCATTTTAATCTGCACCATCAGTGTTATCCTCTTCATTTTCATCATTAAGGTAATTTCCTACATTCTCGAAGAAATTTACATTGTGCCCTAGTTTTTTTTTTTTTTTTTAATTAGTTCATACAACTCTTCAAAGAATTATTTCGATAATAAATCCTAATCTGCCTATGATTTCTGCACTGAACTGTTTGAATTTGTGATTATGAATGATTGGTTTTGGCATAGGAAAGAGAAATCGCGATGGTCTTCTCCCATGATTTACGTGAATTTATTCTTCGAGCAAGAGTGTTGAAACTGTATAGACAGGGTTTAAGAATAGCTCGGAAAGCACCTGTTGATGGTCGAGGTAAAGCTTTGTTTAATGGGATTTTATAATGACTTTGTGTTGTGATTGTGGAAATTTCATGAATTGGATTTGATGATAAGAGTGTTTTGGAACAGATGAATTGAGGCATATGATGAGAGAAGAAATGGAGAAGAACAGAAAGTGTAATGATAGACAGAAAATAAGATTTTTGTTGAGCGAAGGAATAGAGAGATTGAAGCAATTAGATGAGATGTTGGATATGCAAGGCCATTAACTAGAGATCTTTCTTTTCTTTCTTTTTTATTAATTTTGATTATTGGGAGTTAAGTTTTTCTCCAATCATTTTGGAGTGTCTCATAGAAAGGAATGTTGTTTTAGGGGAAGGATATGAGTTTGGTTTAGGGCTTATCTTCAAGTTATTGTAATCAAATTGTGATTAAGGTACAAAGGAGTTATTAATTCCACTTCCCACATTATTTGTATCAGTTTGATTTTTATGTTAGGTTTTGAAATAAGAAACTGAAATCATCTAAAATTGAGATGAATATGTGGGATTATTGACTGAGA CAAAATCGGTCTTCCGTCGTTGAATCCTCAAAGAAATCGGAACCGAACGACAGAAATGATTATACCTCCGATTGAATCAAGCAGGGAATTCGCTTCATTTTAATCTGCACCATCAGTGTTATCCTCTTCATTTTCATCATTAAGAGAAATCGCGATGGTCTTCTCCCATGATTTACGTGAATTTATTCTTCGAGCAAGAGTGTTGAAACTGTATAGACAGGGTTTAAGAATAGCTCGGAAAGCACCTGTTGATGGTCGAGATGAATTGAGGCATATGATGAGAGAAGAAATGGAGAAGAACAGAAAGTGTAATGATAGACAGAAAATAAGATTTTTGTTGAGCGAAGGAATAGAGAGATTGAAGCAATTAGATGAGATGTTGGATATGCAAGGCCATTAACTAGAGATCTTTCTTTTCTTTCTTTTTTATTAATTTTGATTATTGGGAGTTAAGTTTTTCTCCAATCATTTTGGAGTGTCTCATAGAAAGGAATGTTGTTTTAGGGGAAGGATATGAGTTTGGTTTAGGGCTTATCTTCAAGTTATTGTAATCAAATTGTGATTAAGGTACAAAGGAGTTATTAATTCCACTTCCCACATTATTTGTATCAGTTTGATTTTTATGTTAGGTTTTGAAATAAGAAACTGAAATCATCTAAAATTGAGATGAATATGTGGGATTATTGACTGAGA ATGGTCTTCTCCCATGATTTACGTGAATTTATTCTTCGAGCAAGAGTGTTGAAACTGTATAGACAGGGTTTAAGAATAGCTCGGAAAGCACCTGTTGATGGTCGAGATGAATTGAGGCATATGATGAGAGAAGAAATGGAGAAGAACAGAAAGTGTAATGATAGACAGAAAATAAGATTTTTGTTGAGCGAAGGAATAGAGAGATTGAAGCAATTAGATGAGATGTTGGATATGCAAGGCCATTAA MVFSHDLREFILRARVLKLYRQGLRIARKAPVDGRDELRHMMREEMEKNRKCNDRQKIRFLLSEGIERLKQLDEMLDMQGH Homology
BLAST of IVF0006841 vs. ExPASy TrEMBL
Match: A0A1S3CRB8 (LYR motif-containing protein 2 OS=Cucumis melo OX=3656 GN=LOC103503854 PE=4 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 1.4e-35 Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0
BLAST of IVF0006841 vs. ExPASy TrEMBL
Match: A0A5D3E7B8 (LYR motif-containing protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007760 PE=4 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 1.4e-35 Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0
BLAST of IVF0006841 vs. ExPASy TrEMBL
Match: A0A5A7V7X8 (LYR motif-containing protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold205G001390 PE=4 SV=1) HSP 1 Score: 156.4 bits (394), Expect = 5.1e-35 Identity = 80/81 (98.77%), Postives = 80/81 (98.77%), Query Frame = 0
BLAST of IVF0006841 vs. ExPASy TrEMBL
Match: A0A6J1F8N3 (uncharacterized protein LOC111443321 OS=Cucurbita moschata OX=3662 GN=LOC111443321 PE=4 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 4.8e-25 Identity = 63/81 (77.78%), Postives = 71/81 (87.65%), Query Frame = 0
BLAST of IVF0006841 vs. ExPASy TrEMBL
Match: A0A0A0LGK2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G874410 PE=4 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 6.3e-25 Identity = 67/81 (82.72%), Postives = 68/81 (83.95%), Query Frame = 0
BLAST of IVF0006841 vs. NCBI nr
Match: XP_008466455.1 (PREDICTED: LYR motif-containing protein 2 [Cucumis melo] >XP_008466456.1 PREDICTED: LYR motif-containing protein 2 [Cucumis melo] >TYK31461.1 LYR motif-containing protein 2 [Cucumis melo var. makuwa]) HSP 1 Score: 157 bits (396), Expect = 4.49e-48 Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0
BLAST of IVF0006841 vs. NCBI nr
Match: KAA0063314.1 (LYR motif-containing protein 2 [Cucumis melo var. makuwa]) HSP 1 Score: 155 bits (391), Expect = 2.60e-47 Identity = 80/81 (98.77%), Postives = 80/81 (98.77%), Query Frame = 0
BLAST of IVF0006841 vs. NCBI nr
Match: XP_004136367.1 (LYR motif-containing protein 2 [Cucumis sativus] >XP_011652458.1 LYR motif-containing protein 2 [Cucumis sativus] >KAE8651352.1 hypothetical protein Csa_000719 [Cucumis sativus]) HSP 1 Score: 153 bits (387), Expect = 1.06e-46 Identity = 79/81 (97.53%), Postives = 80/81 (98.77%), Query Frame = 0
BLAST of IVF0006841 vs. NCBI nr
Match: XP_023535371.1 (uncharacterized protein LOC111796833 [Cucurbita pepo subsp. pepo] >XP_023535372.1 uncharacterized protein LOC111796833 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 122 bits (307), Expect = 1.75e-34 Identity = 63/81 (77.78%), Postives = 71/81 (87.65%), Query Frame = 0
BLAST of IVF0006841 vs. NCBI nr
Match: XP_022936861.1 (uncharacterized protein LOC111443321 [Cucurbita moschata] >XP_022936862.1 uncharacterized protein LOC111443321 [Cucurbita moschata]) HSP 1 Score: 122 bits (305), Expect = 3.54e-34 Identity = 63/81 (77.78%), Postives = 71/81 (87.65%), Query Frame = 0
BLAST of IVF0006841 vs. TAIR 10
Match: AT1G76065.1 (LYR family of Fe/S cluster biogenesis protein ) HSP 1 Score: 110.2 bits (274), Expect = 8.1e-25 Identity = 55/76 (72.37%), Postives = 66/76 (86.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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