IVF0006699 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACATATTGTAACGACGTTGACGACGAGGACGAAGGGGACTCCACGTACGCGACGACCACCGCTTCAGAAGACATTCAATACATTGAGACAACAAACGAGTGGTCTCAGTGGCGCGACGACCTAGCCGAATCGATGTTCACCGAATGGCAATTGCGTAACGCTTAA ATGACATATTGTAACGACGTTGACGACGAGGACGAAGGGGACTCCACGTACGCGACGACCACCGCTTCAGAAGACATTCAATACATTGAGACAACAAACGAGTGGTCTCAGTGGCGCGACGACCTAGCCGAATCGATGTTCACCGAATGGCAATTGCGTAACGCTTAA ATGACATATTGTAACGACGTTGACGACGAGGACGAAGGGGACTCCACGTACGCGACGACCACCGCTTCAGAAGACATTCAATACATTGAGACAACAAACGAGTGGTCTCAGTGGCGCGACGACCTAGCCGAATCGATGTTCACCGAATGGCAATTGCGTAACGCTTAA MTYCNDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA Homology
BLAST of IVF0006699 vs. ExPASy TrEMBL
Match: A0A5D3CJ50 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold981G00180 PE=3 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 2.0e-22 Identity = 54/55 (98.18%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of IVF0006699 vs. ExPASy TrEMBL
Match: A0A5A7V4Q8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold154G00240 PE=3 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 2.6e-22 Identity = 53/55 (96.36%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of IVF0006699 vs. ExPASy TrEMBL
Match: A0A5A7SZH3 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold510G00390 PE=3 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 5.8e-22 Identity = 53/55 (96.36%), Postives = 54/55 (98.18%), Query Frame = 0
BLAST of IVF0006699 vs. ExPASy TrEMBL
Match: A0A5A7UG16 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1192G00090 PE=3 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 5.8e-22 Identity = 53/55 (96.36%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of IVF0006699 vs. ExPASy TrEMBL
Match: A0A5A7UZF0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G00690 PE=3 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 7.5e-22 Identity = 53/55 (96.36%), Postives = 53/55 (96.36%), Query Frame = 0
BLAST of IVF0006699 vs. NCBI nr
Match: TYK11987.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 112 bits (281), Expect = 1.12e-30 Identity = 54/55 (98.18%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of IVF0006699 vs. NCBI nr
Match: KAA0062284.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 112 bits (280), Expect = 1.59e-30 Identity = 53/55 (96.36%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of IVF0006699 vs. NCBI nr
Match: KAA0058871.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK23750.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 110 bits (276), Expect = 6.48e-30 Identity = 53/55 (96.36%), Postives = 53/55 (96.36%), Query Frame = 0
BLAST of IVF0006699 vs. NCBI nr
Match: TYK05336.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 110 bits (274), Expect = 1.31e-29 Identity = 52/55 (94.55%), Postives = 54/55 (98.18%), Query Frame = 0
BLAST of IVF0006699 vs. NCBI nr
Match: TYK04228.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 108 bits (269), Expect = 1.79e-29 Identity = 51/55 (92.73%), Postives = 54/55 (98.18%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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