IVF0006368 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTCTAGTGGTGCTTCTAGAGAAAATTGGTGGCAAGATATATGCTAATAAGGTGTTTGATTAAATGTCACAATTTGATGATTTATTGAATAACATTTTAAAATTTTTACTTTTTTTTTTTTTATGGAAACCGACTTTTGCTTATTTATTTTTATTCTATTGTATGCAGGGTCTCTTTACTATTGAGAATCTCACCCTGCCATCAAGGTTTTACTACAGATGCTTTGGTTAACAACAAACATCAAGTATTCAAAGCTGCCAAATCGATCAATGAAAATATTTTGCATGAAATGCCCCTACCAACTGTTATAAGGGAGGCAGTCCGAGCTGTGAGCATTCTCTATTCACTTATACCGTACAGTTCGATCTGCTAAGAATCATACATACAATAGACAATTTTTTGCGACCATAACAAAACTGATTGAAGTTAACTATACTAACAAAGTAGATGAATTTTAATAATTTTAATTATGGGCTTTCAAATGAGAATAGATGTACATGTTGTCTTCTCCTGTGATATATTTTAAGTTGAGGACTTTTTGGCCAAATTTAACATACAACGGTTGAGACATTGATTTCCTTGTAGATTGAGTTTTCAAATTTACACTCCCTACACATGTAGTATTTTTTTTAAAAATGACACTTGTTGTGATTTTTTATTCCTAAATTGGAAAACAAACTCTCATTGGGTAGTATAATCAATGTAGAACTTGGTAAACCTAAATTTATGTCTTGTTAACTGTTTTGGTTACCATGAATTGTACAGTCTGGAAAAGCAACTTTGAGTGAAGAACTCTACAAGATTTTAACATCAGAATCTGGTCTAGCCGAGAACATGCTGAATCAGCTTAATCTAAAATCCGACCATGAAGTTTTTAAAGCCATAAACCATCTTGAAGCTGTAATATTCTCCTTGAAAGAGAAATACACCGAACAAAGTGGCAATAAATTTTTAGTTCGAACTTCTTGGTCGTTTGTCAAGGACGAAACGACTAGGATTGATAAGTTGAAATTACTAACTAATCGAGCCGAGGTTCTTCTACAACTACTAAAATCAAAATATCCAAATCATCCCTAA ATGATTCTAGTGGTGCTTCTAGAGAAAATTGGTGGCAAGATATATGCTAATAAGGTGGTCTCTTTACTATTGAGAATCTCACCCTGCCATCAAGGTTTTACTACAGATGCTTTGGTTAACAACAAACATCAAGTATTCAAAGCTGCCAAATCGATCAATGAAAATATTTTGCATGAAATGCCCCTACCAACTGTTATAAGGGAGGCAGTCCGAGCTTCTGGAAAAGCAACTTTGAGTGAAGAACTCTACAAGATTTTAACATCAGAATCTGGTCTAGCCGAGAACATGCTGAATCAGCTTAATCTAAAATCCGACCATGAAGTTTTTAAAGCCATAAACCATCTTGAAGCTGTAATATTCTCCTTGAAAGAGAAATACACCGAACAAAGTGGCAATAAATTTTTAGTTCGAACTTCTTGGTCGTTTGTCAAGGACGAAACGACTAGGATTGATAAGTTGAAATTACTAACTAATCGAGCCGAGGTTCTTCTACAACTACTAAAATCAAAATATCCAAATCATCCCTAA ATGATTCTAGTGGTGCTTCTAGAGAAAATTGGTGGCAAGATATATGCTAATAAGGTGGTCTCTTTACTATTGAGAATCTCACCCTGCCATCAAGGTTTTACTACAGATGCTTTGGTTAACAACAAACATCAAGTATTCAAAGCTGCCAAATCGATCAATGAAAATATTTTGCATGAAATGCCCCTACCAACTGTTATAAGGGAGGCAGTCCGAGCTTCTGGAAAAGCAACTTTGAGTGAAGAACTCTACAAGATTTTAACATCAGAATCTGGTCTAGCCGAGAACATGCTGAATCAGCTTAATCTAAAATCCGACCATGAAGTTTTTAAAGCCATAAACCATCTTGAAGCTGTAATATTCTCCTTGAAAGAGAAATACACCGAACAAAGTGGCAATAAATTTTTAGTTCGAACTTCTTGGTCGTTTGTCAAGGACGAAACGACTAGGATTGATAAGTTGAAATTACTAACTAATCGAGCCGAGGTTCTTCTACAACTACTAAAATCAAAATATCCAAATCATCCCTAA MILVVLLEKIGGKIYANKVVSLLLRISPCHQGFTTDALVNNKHQVFKAAKSINENILHEMPLPTVIREAVRASGKATLSEELYKILTSESGLAENMLNQLNLKSDHEVFKAINHLEAVIFSLKEKYTEQSGNKFLVRTSWSFVKDETTRIDKLKLLTNRAEVLLQLLKSKYPNHP Homology
BLAST of IVF0006368 vs. ExPASy Swiss-Prot
Match: Q56WM6 (Rop guanine nucleotide exchange factor 14 OS=Arabidopsis thaliana OX=3702 GN=ROPGEF14 PE=1 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 4.4e-28 Identity = 67/134 (50.00%), Postives = 90/134 (67.16%), Query Frame = 0
BLAST of IVF0006368 vs. ExPASy Swiss-Prot
Match: Q9LZN0 (Rop guanine nucleotide exchange factor 7 OS=Arabidopsis thaliana OX=3702 GN=ROPGEF7 PE=1 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 1.5e-12 Identity = 41/133 (30.83%), Postives = 75/133 (56.39%), Query Frame = 0
BLAST of IVF0006368 vs. ExPASy Swiss-Prot
Match: Q9LQ89 (Rop guanine nucleotide exchange factor 2 OS=Arabidopsis thaliana OX=3702 GN=ROPGEF2 PE=1 SV=2) HSP 1 Score: 72.4 bits (176), Expect = 5.7e-12 Identity = 46/134 (34.33%), Postives = 76/134 (56.72%), Query Frame = 0
BLAST of IVF0006368 vs. ExPASy Swiss-Prot
Match: F4K295 (Rop guanine nucleotide exchange factor 5 OS=Arabidopsis thaliana OX=3702 GN=ROPGEF5 PE=2 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 5.7e-12 Identity = 48/160 (30.00%), Postives = 82/160 (51.25%), Query Frame = 0
BLAST of IVF0006368 vs. ExPASy Swiss-Prot
Match: A4IJ27 (Rop guanine nucleotide exchange factor 3 OS=Arabidopsis thaliana OX=3702 GN=ROPGEF3 PE=2 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 3.7e-11 Identity = 43/134 (32.09%), Postives = 74/134 (55.22%), Query Frame = 0
BLAST of IVF0006368 vs. ExPASy TrEMBL
Match: E5GCE7 (Rop guanine nucleotide exchange factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 243.0 bits (619), Expect = 9.0e-61 Identity = 127/128 (99.22%), Postives = 127/128 (99.22%), Query Frame = 0
BLAST of IVF0006368 vs. ExPASy TrEMBL
Match: A0A1S3BA08 (rop guanine nucleotide exchange factor 14 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487635 PE=4 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 3.9e-56 Identity = 119/133 (89.47%), Postives = 123/133 (92.48%), Query Frame = 0
BLAST of IVF0006368 vs. ExPASy TrEMBL
Match: A0A5A7UA79 (Rop guanine nucleotide exchange factor 14 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold207G00880 PE=4 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 3.9e-56 Identity = 119/133 (89.47%), Postives = 123/133 (92.48%), Query Frame = 0
BLAST of IVF0006368 vs. ExPASy TrEMBL
Match: A0A1S3BAR8 (rop guanine nucleotide exchange factor 14 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487635 PE=4 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 3.9e-56 Identity = 119/133 (89.47%), Postives = 123/133 (92.48%), Query Frame = 0
BLAST of IVF0006368 vs. ExPASy TrEMBL
Match: A0A0A0L1G9 (PRONE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G669200 PE=4 SV=1) HSP 1 Score: 223.4 bits (568), Expect = 7.4e-55 Identity = 116/133 (87.22%), Postives = 122/133 (91.73%), Query Frame = 0
BLAST of IVF0006368 vs. NCBI nr
Match: ADN34146.1 (rop guanine nucleotide exchange factor [Cucumis melo subsp. melo]) HSP 1 Score: 246 bits (628), Expect = 1.99e-80 Identity = 127/128 (99.22%), Postives = 127/128 (99.22%), Query Frame = 0
BLAST of IVF0006368 vs. NCBI nr
Match: XP_008444259.1 (PREDICTED: rop guanine nucleotide exchange factor 14 isoform X2 [Cucumis melo]) HSP 1 Score: 230 bits (587), Expect = 1.44e-69 Identity = 119/133 (89.47%), Postives = 123/133 (92.48%), Query Frame = 0
BLAST of IVF0006368 vs. NCBI nr
Match: KAA0052264.1 (rop guanine nucleotide exchange factor 14 isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 230 bits (587), Expect = 1.44e-69 Identity = 119/133 (89.47%), Postives = 123/133 (92.48%), Query Frame = 0
BLAST of IVF0006368 vs. NCBI nr
Match: XP_008444257.1 (PREDICTED: rop guanine nucleotide exchange factor 14 isoform X1 [Cucumis melo] >XP_008444258.1 PREDICTED: rop guanine nucleotide exchange factor 14 isoform X1 [Cucumis melo]) HSP 1 Score: 230 bits (587), Expect = 1.54e-69 Identity = 119/133 (89.47%), Postives = 123/133 (92.48%), Query Frame = 0
BLAST of IVF0006368 vs. NCBI nr
Match: XP_031739980.1 (rop guanine nucleotide exchange factor 14 [Cucumis sativus] >KGN55568.1 hypothetical protein Csa_012142 [Cucumis sativus]) HSP 1 Score: 226 bits (576), Expect = 6.20e-68 Identity = 116/133 (87.22%), Postives = 122/133 (91.73%), Query Frame = 0
BLAST of IVF0006368 vs. TAIR 10
Match: AT1G31650.1 (RHO guanyl-nucleotide exchange factor 14 ) HSP 1 Score: 125.9 bits (315), Expect = 3.1e-29 Identity = 67/134 (50.00%), Postives = 90/134 (67.16%), Query Frame = 0
BLAST of IVF0006368 vs. TAIR 10
Match: AT5G02010.1 (RHO guanyl-nucleotide exchange factor 7 ) HSP 1 Score: 74.3 bits (181), Expect = 1.1e-13 Identity = 41/133 (30.83%), Postives = 75/133 (56.39%), Query Frame = 0
BLAST of IVF0006368 vs. TAIR 10
Match: AT1G01700.1 (RHO guanyl-nucleotide exchange factor 2 ) HSP 1 Score: 72.4 bits (176), Expect = 4.1e-13 Identity = 46/134 (34.33%), Postives = 76/134 (56.72%), Query Frame = 0
BLAST of IVF0006368 vs. TAIR 10
Match: AT5G05940.1 (ROP guanine nucleotide exchange factor 5 ) HSP 1 Score: 72.4 bits (176), Expect = 4.1e-13 Identity = 48/160 (30.00%), Postives = 82/160 (51.25%), Query Frame = 0
BLAST of IVF0006368 vs. TAIR 10
Match: AT4G00460.2 (RHO guanyl-nucleotide exchange factor 3 ) HSP 1 Score: 69.7 bits (169), Expect = 2.6e-12 Identity = 43/134 (32.09%), Postives = 74/134 (55.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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