IVF0006176 (gene) Melon (IVF77) v1

Overview
NameIVF0006176
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReverse transcriptase
Locationchr12: 6260529 .. 6265111 (-)
RNA-Seq ExpressionIVF0006176
SyntenyIVF0006176
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCACCAAGGAGAGGTGCACGAAGGGGTGGCCGAGGAGGCCGAGGAAGGGGAGCAGGACGCGTTCAGCCTGAGGTGCAGCCTGTAGCCCAAGCCCCTGACCCGGCTGCGCCAGTTACTCATGCGGACCTAGCCGCCATGGAGCAGAGGTTTAGAGATATGATTATGCAAATGCGGGAGCAGCAGAAGCCTGCCTCGCCAACTCCGGCGCCAGCTCCAGCGCCAGCTCCAGCACCAATTCCTGCTCCAGCTCCGGCTCCGGTACCAGTTGCACCCCAGTTTGTGCCGGATCAGTTGTCGGCAGAGGCTAAGCACCTGAGGGATTTCAGGAAGTATAATCCCACGACGTTTGATGGGTCTTTGGAGGACCCCACCAGAGCTCAGATGTGGCTATCGTCCTTGGAGACCATATTCCGTTACATGAAATGCCCTGAGGATCAGAAGGTTCAGTGTGCTGTCTTTATGTTGACTGACAGAGGTACTGCATGGTGGGAGACTACAGAGAGGATGCTAGGTGGTGATGTGAGTCAGATCACGTGGCAGCAGTTCAAGGAGAGTTTCTATGCGAAATTCTTCTCTGCCAGTTTGAGAGATGCCAAGCGGCAGGAGTTTCTGAACTTAGAGCAGGGTGACATGACAGTGGAGCAGTATGATGCGGAGTTTGACATGTTATCCCGCTTCGCTCCCGAGATGATAGCGACCGAGGCGGCCAGAGCTGATAAGTTTGTTAGAGGCCTCAGACTGGACATCCAGGGTTTGGTCCGAGCTTTCAGACCCGCTACTCATGCCGATGCACTGCGTCTGGCAGTGGATCTCAGTTTACAGGAGAGGGCCAACTCGTCTAAGACCGCTGGTAGAGGTTCGACGTCTGGACAGAAGAGGAAGGCTGAGCAGCAGCCTGTTCCAGTGCCACAGCGGAATTTCAGACCAGGTGGTGAGTTTCGCAGCTTCCAGCAGAAACCTTTTGAGGCAGGGGAGGCTGCCAGAGGGAAGCCGTTGTGTACCACTTGTGGGAAGCACCATCTGGGCCGTTGCTTATTCGGGACCAGGACCTGCTTTAAGTGCAGGCAAGAGGGTCATACAGCTGACAGATGCCCGTTGAGAGTCACGGGGATCGCGCAGAATCAGGGAGCAGGTGCTCCACATCAAGGTAGAGTCTTTGCTACAAACAGGACTGAGGCCGAGAAGGCAGGCACAGTAGTGACAGGTACGCTCCCAGTGTTGGGGCATTACGCCTTAGTTTTGTTTGATTCGGGTTCGTCACATTCTTTTATCTCTTCCGCATTTGTGTCGCATGCCCGCTTAGAGGTAGAGCCCTTACACCATGTTCTGTCAGTATCTACTCCTTCCGGGGAATGTATGTTGTCGAAGGAAAAGGTGAAGGCATGTCAGATTGAGATAGCAGGCCATGTGATTGAGGTAACGCTGATAGTTCTGGATATGCTGGACTTTGATGTAATCCTGGGTATGGATTGGCTGGCCGCTAACCACGCCAGCATAGATTGTTCACGTAAGGAGGTAACGTTTAACCCTCCCTCGATGGCCAGTTTTAAATTTAAGGGAGGAGGGTCAAAGTCGTTGCCTCAGGTAATCTCAGCCATCAGGGCCAGTAAACTGCTCAGTCAGGGTACTTGGGGTATCTTAGCGAGTGTGGTGGATACTAGAGAGGCGGATGTATCCCTGTCATCAGAACCAGTAGTGAGGGACTATCCGGACGTTTTTCCTGAGGAACTTCCAGGGTTACCTCCGCACAGAGAGGTTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTATATCCAGAGCCCCTTACAGAATGGCCCCCGCAGAATTGAAAGAACTGAAGGTACAGTTACAGGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTCTTATTTGTTAAGAAGAAGGATGGGTCGATGCGTCTATGCATTGACTATAGGGAGTTGAATAAGGTAACCGTAAAGAACAGATATCCCTTGCCCAGGATTGACGATCTATTTGACCAGTTACAGGAAGCCACAGTCTCTAAGATTGATCTTCGGTCAGGATACCATCAGCTGAGGATTAAGGATGAGGATATACCGAAGACAGCATTTCGATCCAGATATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATTGTGTTTATCGACGATATCTTGATATACTCCAAGACGGAGGCCGAACACGAGGAGCATTTACGTTTGGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGTTTTCTGGGTTTAGCGGGCTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCCGAAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGACCCTTAAACAGAAGCTAGTTACCGCGCCGGTTCTTACTGTACCCGATGGTTCTGGCAATTTCGTGATTTATAGTGATGCTTCCAAGAAGGGTCTGGGTTGTGTTTTGATGCAGCAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTATTTATATGGTGAAAAGATACAGATATTCACAGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGGAAAGTATCACATTCAGCAGCACTCATTACCCAGCAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTTACTATGCAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCGGTTGAGTTCTCATTATCCTCTGATGGTGGACTGTTGTTTGAGAGACGCCTCTGTGTTCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCGCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTAAAGCGGGTTTATTGGTGGCGTAACATGAAGAGAGAAGTAGCAGAATTTGTTAGTAGATGCCTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCTTTGAGCATACCGGAATGGAAGTGGGAGAACGTGTCCATGGATTTCATTACAGGGCTACCGAGAACTCTGAGGGGTTTTACAGTGATTTGGGTTGTGGTGGACAGACTTACTAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGCAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGATTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCATTCCAAATTTTGGAAGGGTTTGCAGACTGCTATGGGCACGAGGTTGGACTTTAGTACGGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAGGTTTTAGAGGATATGTTACGGGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTGCATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCGTTTGAGGCCCTGTACGGCAGATGTTGTAGATCCCCGGTTTGCTGGGGTGAGGTGGGTGAGCAGAGATTGATGGGTCCTGAGTTAGTTCAGTCTACTAACGAAGCAATTCAGAAGATTAGATCACGCATGCATACCGCTCAGAGTAGACAGAAGAGTTATGCAGATGTGAGGCGGAAGGACCTTGAGTTTGAAATAGGGGATAAGGTGTTCTTAAAGGTAGCACCTATGAAAGGTGTCTTACGTTTTGAAAGGAGGGGAAAGTTGAGTCCCCGTTTTGTTGGGCCATTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTACCGCTTGGCGTTGCCTCCATCACTCTCGACAGTCCATGATGTGTTTCACGTTTCTATGTTGAGGAAGTACGTGCCAGATCCATCCCATGTAGTGGATTACGAGCCACTAGAGATTGATGAAAACTTGAGCTATGTTGAACAACCTGTTGAGGTGCTTGCTAGAGAGGTGAAGACGTTGAGAAATAAACAAATTCCCCTAGTTAAAGTCTTATGGCGGAATCACCGGGTAGAAGAGGCTACATGGGAGCGTGAAGACGACATGAGATCCCGTTATCCCGAACTGTTCGAGGAATAA

mRNA sequence

ATGCCACCAAGGAGAGGTGCACGAAGGGGTGGCCGAGGAGGCCGAGGAAGGGGAGCAGGACGCGTTCAGCCTGAGGTGCAGCCTGTAGCCCAAGCCCCTGACCCGGCTGCGCCAGTTACTCATGCGGACCTAGCCGCCATGGAGCAGAGGTTTAGAGATATGATTATGCAAATGCGGGAGCAGCAGAAGCCTGCCTCGCCAACTCCGGCGCCAGCTCCAGCGCCAGCTCCAGCACCAATTCCTGCTCCAGCTCCGGCTCCGGTACCAGTTGCACCCCAGTTTGTGCCGGATCAGTTGTCGGCAGAGGCTAAGCACCTGAGGGATTTCAGGAAGTATAATCCCACGACGTTTGATGGGTCTTTGGAGGACCCCACCAGAGCTCAGATGTGGCTATCGTCCTTGGAGACCATATTCCGTTACATGAAATGCCCTGAGGATCAGAAGGTTCAGTGTGCTGTCTTTATGTTGACTGACAGAGGTACTGCATGGTGGGAGACTACAGAGAGGATGCTAGGTGGTGATGTGAGTCAGATCACGTGGCAGCAGTTCAAGGAGAGTTTCTATGCGAAATTCTTCTCTGCCAGTTTGAGAGATGCCAAGCGGCAGGAGTTTCTGAACTTAGAGCAGGGTGACATGACAGTGGAGCAGTATGATGCGGAGTTTGACATGTTATCCCGCTTCGCTCCCGAGATGATAGCGACCGAGGCGGCCAGAGCTGATAAGTTTGTTAGAGGCCTCAGACTGGACATCCAGGGTTTGGTCCGAGCTTTCAGACCCGCTACTCATGCCGATGCACTGCGTCTGGCAGTGGATCTCAGTTTACAGGAGAGGGCCAACTCGTCTAAGACCGCTGGTAGAGGTTCGACGTCTGGACAGAAGAGGAAGGCTGAGCAGCAGCCTGTTCCAGTGCCACAGCGGAATTTCAGACCAGGTGGTGAGTTTCGCAGCTTCCAGCAGAAACCTTTTGAGGCAGGGGAGGCTGCCAGAGGGAAGCCGTTGTGTACCACTTGTGGGAAGCACCATCTGGGCCGTTGCTTATTCGGGACCAGGACCTGCTTTAAGTGCAGGCAAGAGGGTCATACAGCTGACAGATGCCCGTTGAGAGTCACGGGGATCGCGCAGAATCAGGGAGCAGGTGCTCCACATCAAGGTAGAGTCTTTGCTACAAACAGGACTGAGGCCGAGAAGGCAGGCACAGTAGTGACAGGTACGCTCCCAGTGTTGGGGCATTACGCCTTAGTTTTGTTTGATTCGGGTTCGTCACATTCTTTTATCTCTTCCGCATTTGTGTCGCATGCCCGCTTAGAGGTAGAGCCCTTACACCATGTTCTGTCAGTATCTACTCCTTCCGGGGAATGTATGTTGTCGAAGGAAAAGGTGAAGGCATGTCAGATTGAGATAGCAGGCCATGTGATTGAGGTAACGCTGATAGTTCTGGATATGCTGGACTTTGATGTAATCCTGGGTATGGATTGGCTGGCCGCTAACCACGCCAGCATAGATTGTTCACGTAAGGAGGTAACGTTTAACCCTCCCTCGATGGCCAGTTTTAAATTTAAGGGAGGAGGGTCAAAGTCGTTGCCTCAGGTAATCTCAGCCATCAGGGCCAGTAAACTGCTCAGTCAGGGTACTTGGGGTATCTTAGCGAGTGTGGTGGATACTAGAGAGGCGGATGTATCCCTGTCATCAGAACCAGTAGTGAGGGACTATCCGGACGTTTTTCCTGAGGAACTTCCAGGGTTACCTCCGCACAGAGAGGTTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTATATCCAGAGCCCCTTACAGAATGGCCCCCGCAGAATTGAAAGAACTGAAGGTACAGTTACAGGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTCTTATTTGTTAAGAAGAAGGATGGGTCGATGCGTCTATGCATTGACTATAGGGAGTTGAATAAGGTAACCGTAAAGAACAGATATCCCTTGCCCAGGATTGACGATCTATTTGACCAGTTACAGGAAGCCACAGTCTCTAAGATTGATCTTCGGTCAGGATACCATCAGCTGAGGATTAAGGATGAGGATATACCGAAGACAGCATTTCGATCCAGATATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATTGTGTTTATCGACGATATCTTGATATACTCCAAGACGGAGGCCGAACACGAGGAGCATTTACGTTTGGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGTTTTCTGGGTTTAGCGGGCTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCCGAAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGACCCTTAAACAGAAGCTAGTTACCGCGCCGGTTCTTACTGTACCCGATGGTTCTGGCAATTTCGTGATTTATAGTGATGCTTCCAAGAAGGGTCTGGGTTGTGTTTTGATGCAGCAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTATTTATATGGTGAAAAGATACAGATATTCACAGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGGAAAGTATCACATTCAGCAGCACTCATTACCCAGCAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTTACTATGCAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCGGTTGAGTTCTCATTATCCTCTGATGGTGGACTGTTGTTTGAGAGACGCCTCTGTGTTCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCGCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTAAAGCGGGTTTATTGGTGGCGTAACATGAAGAGAGAAGTAGCAGAATTTGTTAGTAGATGCCTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCTTTGAGCATACCGGAATGGAAGTGGGAGAACGTGTCCATGGATTTCATTACAGGGCTACCGAGAACTCTGAGGGGTTTTACAGTGATTTGGGTTGTGGTGGACAGACTTACTAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGCAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGATTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCATTCCAAATTTTGGAAGGGTTTGCAGACTGCTATGGGCACGAGGTAGCTGGGACTCCCACTTGCATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCGTTTGAGGCCCTGTACGGCAGATGTTGTAGATCCCCGGTTTGCTGGGGTGAGGTGGGTGAGCAGAGATTGATGGGTCCTGAGTTAGTTCAGTCTACTAACGAAGCAATTCAGAAGATTAGATCACGCATGCATACCGCTCAGAGTAGACAGAAGAGTTATGCAGATGTGAGGCGGAAGGACCTTGAGTTTGAAATAGGGGATAAGGTGTTCTTAAAGGTAGCACCTATGAAAGGTGTCTTACGTTTTGAAAGGAGGGGAAAGTTGAGTCCCCGTTTTGTTGGGCCATTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTACCGCTTGGCGTTGCCTCCATCACTCTCGACAGTCCATGATGTGTTTCACGTTTCTATGTTGAGGAAGTACGTGCCAGATCCATCCCATGTAGTGGATTACGAGCCACTAGAGATTGATGAAAACTTGAGCTATGTTGAACAACCTGTTGAGGTGCTTGCTAGAGAGGTGAAGACGTTGAGAAATAAACAAATTCCCCTAGTTAAAGTCTTATGGCGGAATCACCGGGTAGAAGAGGCTACATGGGAGCGTGAAGACGACATGAGATCCCGTTATCCCGAACTGTTCGAGGAATAA

Coding sequence (CDS)

ATGCCACCAAGGAGAGGTGCACGAAGGGGTGGCCGAGGAGGCCGAGGAAGGGGAGCAGGACGCGTTCAGCCTGAGGTGCAGCCTGTAGCCCAAGCCCCTGACCCGGCTGCGCCAGTTACTCATGCGGACCTAGCCGCCATGGAGCAGAGGTTTAGAGATATGATTATGCAAATGCGGGAGCAGCAGAAGCCTGCCTCGCCAACTCCGGCGCCAGCTCCAGCGCCAGCTCCAGCACCAATTCCTGCTCCAGCTCCGGCTCCGGTACCAGTTGCACCCCAGTTTGTGCCGGATCAGTTGTCGGCAGAGGCTAAGCACCTGAGGGATTTCAGGAAGTATAATCCCACGACGTTTGATGGGTCTTTGGAGGACCCCACCAGAGCTCAGATGTGGCTATCGTCCTTGGAGACCATATTCCGTTACATGAAATGCCCTGAGGATCAGAAGGTTCAGTGTGCTGTCTTTATGTTGACTGACAGAGGTACTGCATGGTGGGAGACTACAGAGAGGATGCTAGGTGGTGATGTGAGTCAGATCACGTGGCAGCAGTTCAAGGAGAGTTTCTATGCGAAATTCTTCTCTGCCAGTTTGAGAGATGCCAAGCGGCAGGAGTTTCTGAACTTAGAGCAGGGTGACATGACAGTGGAGCAGTATGATGCGGAGTTTGACATGTTATCCCGCTTCGCTCCCGAGATGATAGCGACCGAGGCGGCCAGAGCTGATAAGTTTGTTAGAGGCCTCAGACTGGACATCCAGGGTTTGGTCCGAGCTTTCAGACCCGCTACTCATGCCGATGCACTGCGTCTGGCAGTGGATCTCAGTTTACAGGAGAGGGCCAACTCGTCTAAGACCGCTGGTAGAGGTTCGACGTCTGGACAGAAGAGGAAGGCTGAGCAGCAGCCTGTTCCAGTGCCACAGCGGAATTTCAGACCAGGTGGTGAGTTTCGCAGCTTCCAGCAGAAACCTTTTGAGGCAGGGGAGGCTGCCAGAGGGAAGCCGTTGTGTACCACTTGTGGGAAGCACCATCTGGGCCGTTGCTTATTCGGGACCAGGACCTGCTTTAAGTGCAGGCAAGAGGGTCATACAGCTGACAGATGCCCGTTGAGAGTCACGGGGATCGCGCAGAATCAGGGAGCAGGTGCTCCACATCAAGGTAGAGTCTTTGCTACAAACAGGACTGAGGCCGAGAAGGCAGGCACAGTAGTGACAGGTACGCTCCCAGTGTTGGGGCATTACGCCTTAGTTTTGTTTGATTCGGGTTCGTCACATTCTTTTATCTCTTCCGCATTTGTGTCGCATGCCCGCTTAGAGGTAGAGCCCTTACACCATGTTCTGTCAGTATCTACTCCTTCCGGGGAATGTATGTTGTCGAAGGAAAAGGTGAAGGCATGTCAGATTGAGATAGCAGGCCATGTGATTGAGGTAACGCTGATAGTTCTGGATATGCTGGACTTTGATGTAATCCTGGGTATGGATTGGCTGGCCGCTAACCACGCCAGCATAGATTGTTCACGTAAGGAGGTAACGTTTAACCCTCCCTCGATGGCCAGTTTTAAATTTAAGGGAGGAGGGTCAAAGTCGTTGCCTCAGGTAATCTCAGCCATCAGGGCCAGTAAACTGCTCAGTCAGGGTACTTGGGGTATCTTAGCGAGTGTGGTGGATACTAGAGAGGCGGATGTATCCCTGTCATCAGAACCAGTAGTGAGGGACTATCCGGACGTTTTTCCTGAGGAACTTCCAGGGTTACCTCCGCACAGAGAGGTTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTATATCCAGAGCCCCTTACAGAATGGCCCCCGCAGAATTGAAAGAACTGAAGGTACAGTTACAGGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTCTTATTTGTTAAGAAGAAGGATGGGTCGATGCGTCTATGCATTGACTATAGGGAGTTGAATAAGGTAACCGTAAAGAACAGATATCCCTTGCCCAGGATTGACGATCTATTTGACCAGTTACAGGAAGCCACAGTCTCTAAGATTGATCTTCGGTCAGGATACCATCAGCTGAGGATTAAGGATGAGGATATACCGAAGACAGCATTTCGATCCAGATATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATTGTGTTTATCGACGATATCTTGATATACTCCAAGACGGAGGCCGAACACGAGGAGCATTTACGTTTGGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGTTTTCTGGGTTTAGCGGGCTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCCGAAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGACCCTTAAACAGAAGCTAGTTACCGCGCCGGTTCTTACTGTACCCGATGGTTCTGGCAATTTCGTGATTTATAGTGATGCTTCCAAGAAGGGTCTGGGTTGTGTTTTGATGCAGCAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTATTTATATGGTGAAAAGATACAGATATTCACAGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGGAAAGTATCACATTCAGCAGCACTCATTACCCAGCAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTTACTATGCAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCGGTTGAGTTCTCATTATCCTCTGATGGTGGACTGTTGTTTGAGAGACGCCTCTGTGTTCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCGCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTAAAGCGGGTTTATTGGTGGCGTAACATGAAGAGAGAAGTAGCAGAATTTGTTAGTAGATGCCTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCTTTGAGCATACCGGAATGGAAGTGGGAGAACGTGTCCATGGATTTCATTACAGGGCTACCGAGAACTCTGAGGGGTTTTACAGTGATTTGGGTTGTGGTGGACAGACTTACTAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGCAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGATTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCATTCCAAATTTTGGAAGGGTTTGCAGACTGCTATGGGCACGAGGTAGCTGGGACTCCCACTTGCATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCGTTTGAGGCCCTGTACGGCAGATGTTGTAGATCCCCGGTTTGCTGGGGTGAGGTGGGTGAGCAGAGATTGATGGGTCCTGAGTTAGTTCAGTCTACTAACGAAGCAATTCAGAAGATTAGATCACGCATGCATACCGCTCAGAGTAGACAGAAGAGTTATGCAGATGTGAGGCGGAAGGACCTTGAGTTTGAAATAGGGGATAAGGTGTTCTTAAAGGTAGCACCTATGAAAGGTGTCTTACGTTTTGAAAGGAGGGGAAAGTTGAGTCCCCGTTTTGTTGGGCCATTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTACCGCTTGGCGTTGCCTCCATCACTCTCGACAGTCCATGATGTGTTTCACGTTTCTATGTTGAGGAAGTACGTGCCAGATCCATCCCATGTAGTGGATTACGAGCCACTAGAGATTGATGAAAACTTGAGCTATGTTGAACAACCTGTTGAGGTGCTTGCTAGAGAGGTGAAGACGTTGAGAAATAAACAAATTCCCCTAGTTAAAGTCTTATGGCGGAATCACCGGGTAGAAGAGGCTACATGGGAGCGTGAAGACGACATGAGATCCCGTTATCCCGAACTGTTCGAGGAATAA

Protein sequence

MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMREQQKPASPTPAPAPAPAPAPIPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRVTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGSSHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQEATVSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRLVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITQQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFIPNFGRVCRLLWARGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNKQIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE
Homology
[Close]
BLAST of IVF0006176 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 8.0e-123
Identity = 278/893 (31.13%), Postives = 464/893 (51.96%), Query Frame = 0 

Query: 576  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPW 635
            E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +  
Sbjct: 391  EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 636  GAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQEATV-SKIDLRSGYH 695
              PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++Q +T+ +K+DL+S YH
Sbjct: 451  ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 696  QLRIKDEDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDI 755
             +R++  D  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDI
Sbjct: 511  LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 756  LIYSKTEAEHEEHLRLVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIE 815
            LI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+
Sbjct: 571  LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 816  AVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQT 875
             V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + + 
Sbjct: 631  KVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIEN 690

Query: 876  LKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQN 935
            +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + N
Sbjct: 691  IKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLN 750

Query: 936  YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELV 995
            Y   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   +
Sbjct: 751  YSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFL 810

Query: 996  KDYDCEILYHPGKANVVADALSRKVSHSAALITQQAPLHRDLERAEIAVSVGAVTMQLAQ 1055
            +D++ EI Y PG AN +ADALSR       ++ +  P+ +D E   I          + Q
Sbjct: 811  QDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQ 870

Query: 1056 LTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAV 1115
            +++    + +++   +ND  L+    L    + VE ++    GLL   +  + +P+D+ +
Sbjct: 871  ISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQL 930

Query: 1116 KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPA 1175
               ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP 
Sbjct: 931  TRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPY 990

Query: 1176 GLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWA 1235
            G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A
Sbjct: 991  GPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTA 1050

Query: 1236 QLYMSEIVRLHGVPVSIVSDRD--------------ARFIPNFG---------------- 1295
            +++   ++   G P  I++D D                F+  F                 
Sbjct: 1051 RMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQ 1110

Query: 1296 ---RVCRLLWAR--GSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRC-CRSPVCWGEVG 1355
               ++ R + +    +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+ 
Sbjct: 1111 TVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL---ELP 1170

Query: 1356 EQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEIGDKVFLKVAPMKG 1415
                   E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K     G
Sbjct: 1171 SFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTG 1230

Query: 1416 VLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY 1419
             L   +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L KY
Sbjct: 1231 FL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]
BLAST of IVF0006176 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 8.0e-123
Identity = 278/893 (31.13%), Postives = 464/893 (51.96%), Query Frame = 0 

Query: 576  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPW 635
            E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +  
Sbjct: 391  EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 636  GAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQEATV-SKIDLRSGYH 695
              PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++Q +T+ +K+DL+S YH
Sbjct: 451  ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 696  QLRIKDEDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDI 755
             +R++  D  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDI
Sbjct: 511  LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 756  LIYSKTEAEHEEHLRLVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIE 815
            LI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+
Sbjct: 571  LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 816  AVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQT 875
             V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + + 
Sbjct: 631  KVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIEN 690

Query: 876  LKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQN 935
            +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + N
Sbjct: 691  IKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLN 750

Query: 936  YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELV 995
            Y   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   +
Sbjct: 751  YSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFL 810

Query: 996  KDYDCEILYHPGKANVVADALSRKVSHSAALITQQAPLHRDLERAEIAVSVGAVTMQLAQ 1055
            +D++ EI Y PG AN +ADALSR       ++ +  P+ +D E   I          + Q
Sbjct: 811  QDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQ 870

Query: 1056 LTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAV 1115
            +++    + +++   +ND  L+    L    + VE ++    GLL   +  + +P+D+ +
Sbjct: 871  ISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQL 930

Query: 1116 KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPA 1175
               ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP 
Sbjct: 931  TRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPY 990

Query: 1176 GLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWA 1235
            G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A
Sbjct: 991  GPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTA 1050

Query: 1236 QLYMSEIVRLHGVPVSIVSDRD--------------ARFIPNFG---------------- 1295
            +++   ++   G P  I++D D                F+  F                 
Sbjct: 1051 RMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQ 1110

Query: 1296 ---RVCRLLWAR--GSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRC-CRSPVCWGEVG 1355
               ++ R + +    +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+ 
Sbjct: 1111 TVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL---ELP 1170

Query: 1356 EQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEIGDKVFLKVAPMKG 1415
                   E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K     G
Sbjct: 1171 SFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTG 1230

Query: 1416 VLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY 1419
             L   +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L KY
Sbjct: 1231 FL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]
BLAST of IVF0006176 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 8.0e-123
Identity = 278/893 (31.13%), Postives = 464/893 (51.96%), Query Frame = 0 

Query: 576  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPW 635
            E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +  
Sbjct: 391  EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 636  GAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQEATV-SKIDLRSGYH 695
              PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++Q +T+ +K+DL+S YH
Sbjct: 451  ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 696  QLRIKDEDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDI 755
             +R++  D  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDI
Sbjct: 511  LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 756  LIYSKTEAEHEEHLRLVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIE 815
            LI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+
Sbjct: 571  LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 816  AVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQT 875
             V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + + 
Sbjct: 631  KVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIEN 690

Query: 876  LKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQN 935
            +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + N
Sbjct: 691  IKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLN 750

Query: 936  YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELV 995
            Y   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   +
Sbjct: 751  YSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFL 810

Query: 996  KDYDCEILYHPGKANVVADALSRKVSHSAALITQQAPLHRDLERAEIAVSVGAVTMQLAQ 1055
            +D++ EI Y PG AN +ADALSR       ++ +  P+ +D E   I          + Q
Sbjct: 811  QDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQ 870

Query: 1056 LTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAV 1115
            +++    + +++   +ND  L+    L    + VE ++    GLL   +  + +P+D+ +
Sbjct: 871  ISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQL 930

Query: 1116 KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPA 1175
               ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP 
Sbjct: 931  TRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPY 990

Query: 1176 GLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWA 1235
            G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A
Sbjct: 991  GPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTA 1050

Query: 1236 QLYMSEIVRLHGVPVSIVSDRD--------------ARFIPNFG---------------- 1295
            +++   ++   G P  I++D D                F+  F                 
Sbjct: 1051 RMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQ 1110

Query: 1296 ---RVCRLLWAR--GSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRC-CRSPVCWGEVG 1355
               ++ R + +    +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+ 
Sbjct: 1111 TVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL---ELP 1170

Query: 1356 EQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEIGDKVFLKVAPMKG 1415
                   E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K     G
Sbjct: 1171 SFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTG 1230

Query: 1416 VLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY 1419
             L   +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L KY
Sbjct: 1231 FL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]
BLAST of IVF0006176 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 8.0e-123
Identity = 278/893 (31.13%), Postives = 464/893 (51.96%), Query Frame = 0 

Query: 576  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPW 635
            E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +  
Sbjct: 391  EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 636  GAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQEATV-SKIDLRSGYH 695
              PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++Q +T+ +K+DL+S YH
Sbjct: 451  ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 696  QLRIKDEDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDI 755
             +R++  D  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDI
Sbjct: 511  LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 756  LIYSKTEAEHEEHLRLVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIE 815
            LI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+
Sbjct: 571  LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 816  AVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQT 875
             V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + + 
Sbjct: 631  KVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIEN 690

Query: 876  LKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQN 935
            +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + N
Sbjct: 691  IKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLN 750

Query: 936  YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELV 995
            Y   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   +
Sbjct: 751  YSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFL 810

Query: 996  KDYDCEILYHPGKANVVADALSRKVSHSAALITQQAPLHRDLERAEIAVSVGAVTMQLAQ 1055
            +D++ EI Y PG AN +ADALSR       ++ +  P+ +D E   I          + Q
Sbjct: 811  QDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQ 870

Query: 1056 LTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAV 1115
            +++    + +++   +ND  L+    L    + VE ++    GLL   +  + +P+D+ +
Sbjct: 871  ISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQL 930

Query: 1116 KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPA 1175
               ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP 
Sbjct: 931  TRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPY 990

Query: 1176 GLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWA 1235
            G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A
Sbjct: 991  GPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTA 1050

Query: 1236 QLYMSEIVRLHGVPVSIVSDRD--------------ARFIPNFG---------------- 1295
            +++   ++   G P  I++D D                F+  F                 
Sbjct: 1051 RMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQ 1110

Query: 1296 ---RVCRLLWAR--GSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRC-CRSPVCWGEVG 1355
               ++ R + +    +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+ 
Sbjct: 1111 TVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL---ELP 1170

Query: 1356 EQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEIGDKVFLKVAPMKG 1415
                   E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K     G
Sbjct: 1171 SFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTG 1230

Query: 1416 VLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY 1419
             L   +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L KY
Sbjct: 1231 FL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]
BLAST of IVF0006176 vs. ExPASy Swiss-Prot
Match: P0CT37 (Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-4 PE=3 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 8.0e-123
Identity = 278/893 (31.13%), Postives = 464/893 (51.96%), Query Frame = 0 

Query: 576  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPW 635
            E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +  
Sbjct: 391  EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 636  GAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQEATV-SKIDLRSGYH 695
              PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++Q +T+ +K+DL+S YH
Sbjct: 451  ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 696  QLRIKDEDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDI 755
             +R++  D  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDI
Sbjct: 511  LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 756  LIYSKTEAEHEEHLRLVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIE 815
            LI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+
Sbjct: 571  LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 816  AVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQT 875
             V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + + 
Sbjct: 631  KVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIEN 690

Query: 876  LKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQN 935
            +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + N
Sbjct: 691  IKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLN 750

Query: 936  YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELV 995
            Y   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   +
Sbjct: 751  YSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFL 810

Query: 996  KDYDCEILYHPGKANVVADALSRKVSHSAALITQQAPLHRDLERAEIAVSVGAVTMQLAQ 1055
            +D++ EI Y PG AN +ADALSR       ++ +  P+ +D E   I          + Q
Sbjct: 811  QDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQ 870

Query: 1056 LTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAV 1115
            +++    + +++   +ND  L+    L    + VE ++    GLL   +  + +P+D+ +
Sbjct: 871  ISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQL 930

Query: 1116 KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPA 1175
               ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP 
Sbjct: 931  TRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPY 990

Query: 1176 GLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWA 1235
            G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A
Sbjct: 991  GPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTA 1050

Query: 1236 QLYMSEIVRLHGVPVSIVSDRD--------------ARFIPNFG---------------- 1295
            +++   ++   G P  I++D D                F+  F                 
Sbjct: 1051 RMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQ 1110

Query: 1296 ---RVCRLLWAR--GSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRC-CRSPVCWGEVG 1355
               ++ R + +    +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+ 
Sbjct: 1111 TVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL---ELP 1170

Query: 1356 EQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEIGDKVFLKVAPMKG 1415
                   E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K     G
Sbjct: 1171 SFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTG 1230

Query: 1416 VLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY 1419
             L   +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L KY
Sbjct: 1231 FL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]
BLAST of IVF0006176 vs. ExPASy TrEMBL
Match: A0A5A7U330 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00040 PE=4 SV=1)

HSP 1 Score: 2791.1 bits (7234), Expect = 0.0e+00
Identity = 1418/1529 (92.74%), Postives = 1439/1529 (94.11%), Query Frame = 0 

Query: 1    MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE 60
            MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRD+IMQMRE
Sbjct: 1    MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMRE 60

Query: 61   QQKPASPTPAPAPAPAPAPIPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 120
            QQKPASPTPAPAPAPAPAP PAPA APVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 61   QQKPASPTPAPAPAPAPAPAPAPALAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 120

Query: 121  LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180
            LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW
Sbjct: 121  LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180

Query: 181  QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240
            QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD
Sbjct: 181  QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240

Query: 241  KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300
            KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRG TSGQKRKAEQQP
Sbjct: 241  KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGLTSGQKRKAEQQP 300

Query: 301  VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360
            VPVPQRNFR GGEFR FQQKPFEAGEAAR KPLCT CGKHHLGRCLFGTRTCFKCRQEGH
Sbjct: 301  VPVPQRNFRSGGEFRRFQQKPFEAGEAARWKPLCTICGKHHLGRCLFGTRTCFKCRQEGH 360

Query: 361  TADRCPLRVTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGS 420
            TADRCPLR+TG AQNQGAGAPHQGRVFATN+TEAEKAGTVVTGTLPVLGHYALVLFD   
Sbjct: 361  TADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTGTLPVLGHYALVLFD--- 420

Query: 421  SHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 480
                                    SVSTPSGECMLSKEKVK CQIEIAGHVIEVTL+VLD
Sbjct: 421  ------------------------SVSTPSGECMLSKEKVKTCQIEIAGHVIEVTLLVLD 480

Query: 481  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 540
            MLDFDVILGMDWLAA+HASIDCSRKEVTFNPPS ASFKFKGGGS+SLPQVISAIRASKLL
Sbjct: 481  MLDFDVILGMDWLAAHHASIDCSRKEVTFNPPSRASFKFKGGGSRSLPQVISAIRASKLL 540

Query: 541  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600
            SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 541  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600

Query: 601  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 660
            SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK
Sbjct: 601  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 660

Query: 661  VTVKNRYPLPRIDDLFDQLQEATV-SKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIV 720
            VTVKNRYPLPRIDDLFDQLQ ATV SKIDLRSGYHQLRIKDED+PKTAFRSRYGHYEFIV
Sbjct: 661  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV 720

Query: 721  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRLVLQTLRDNK 780
            MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNK
Sbjct: 721  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 780

Query: 781  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 840
            LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 781  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 840

Query: 841  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSD 900
            RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSG+FVIYSD
Sbjct: 841  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 900

Query: 901  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 960
            ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF
Sbjct: 901  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 960

Query: 961  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITQ 1020
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALIT+
Sbjct: 961  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 1020

Query: 1021 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 1080
            QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV
Sbjct: 1021 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 1080

Query: 1081 EFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 1140
            EFSLSSDGGLLFERRLCVPSDS VKTELLSEAHSSPFSMHPGSTKMY+D+KRVYWWRNMK
Sbjct: 1081 EFSLSSDGGLLFERRLCVPSDSVVKTELLSEAHSSPFSMHPGSTKMYRDVKRVYWWRNMK 1140

Query: 1141 REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 1200
            REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV
Sbjct: 1141 REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 1200

Query: 1201 VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFIPNFG------ 1260
            VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARF   F       
Sbjct: 1201 VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKSLQTA 1260

Query: 1261 ------------------------------RVCRLLWARGSWDSHLHLMEFAYNNSYQAT 1320
                                          R C L +  GSWDSHLHLMEF YNNSYQAT
Sbjct: 1261 MGTRLDFSTAFHPQTDGQTERLNQVLEYMLRACALEFP-GSWDSHLHLMEFVYNNSYQAT 1320

Query: 1321 IGMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYAD 1380
            IGMAPFEALYG+CCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYAD
Sbjct: 1321 IGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYAD 1380

Query: 1381 VRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSL 1440
            VRRKDLEFE+GDKVFLKVAPM+GVLRFERRGKLSPRF+GPFEILERIGPVAYRLALPPSL
Sbjct: 1381 VRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFIGPFEILERIGPVAYRLALPPSL 1440

Query: 1441 STVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNKQIPLVK 1493
            STVHDVFHVSMLRKYVPDPSHVVDY+PL+IDENLSY EQPVEVLAREVKTLRNK+IPLVK
Sbjct: 1441 STVHDVFHVSMLRKYVPDPSHVVDYKPLKIDENLSYTEQPVEVLAREVKTLRNKEIPLVK 1500

[Close]
BLAST of IVF0006176 vs. ExPASy TrEMBL
Match: A0A5A7UAA8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00800 PE=4 SV=1)

HSP 1 Score: 2786.9 bits (7223), Expect = 0.0e+00
Identity = 1421/1529 (92.94%), Postives = 1435/1529 (93.85%), Query Frame = 0 

Query: 1    MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE 60
            MPPRRGARRGGRGGRGRGAGRVQPE                                   
Sbjct: 1    MPPRRGARRGGRGGRGRGAGRVQPE----------------------------------- 60

Query: 61   QQKPASPTPAPAPAPAPAPIPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 120
              KPASPTPAPAPAPAPAP+PAPAPA VPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 61   --KPASPTPAPAPAPAPAPVPAPAPALVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 120

Query: 121  LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180
            LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW
Sbjct: 121  LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180

Query: 181  QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240
            QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD
Sbjct: 181  QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240

Query: 241  KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300
            KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQE ANSSKTAGRGSTSGQKRKAEQQP
Sbjct: 241  KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQEMANSSKTAGRGSTSGQKRKAEQQP 300

Query: 301  VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360
            VPVPQRNFR GGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH
Sbjct: 301  VPVPQRNFRSGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360

Query: 361  TADRCPLRVTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGS 420
            TADRCPLR+TGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGS
Sbjct: 361  TADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGS 420

Query: 421  SHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 480
            SHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLS+EKVKACQIEIAGHVIEVTLIVLD
Sbjct: 421  SHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSREKVKACQIEIAGHVIEVTLIVLD 480

Query: 481  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 540
            MLDFDVILGMDWLAANHASIDCSRK+VTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL
Sbjct: 481  MLDFDVILGMDWLAANHASIDCSRKDVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 540

Query: 541  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600
            SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 541  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600

Query: 601  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 660
            SRAPYRMAPAELKELKVQLQELLDKGFIRP+VSPWGAPVLFVKKKDGSMRLCIDYRELNK
Sbjct: 601  SRAPYRMAPAELKELKVQLQELLDKGFIRPNVSPWGAPVLFVKKKDGSMRLCIDYRELNK 660

Query: 661  VTVKNRYPLPRIDDLFDQLQEATV-SKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIV 720
            VTVKNRYPLPRIDDLFDQLQ ATV SKIDLRSGY+QLRIKDED+PKTAFRSRYGHYEFIV
Sbjct: 661  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYNQLRIKDEDVPKTAFRSRYGHYEFIV 720

Query: 721  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRLVLQTLRDNK 780
            MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNK
Sbjct: 721  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 780

Query: 781  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 840
            LYAKFSKCEFWLKQVSFLGHVVSKA VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 781  LYAKFSKCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 840

Query: 841  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSD 900
            RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSG+FVIYSD
Sbjct: 841  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 900

Query: 901  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 960
            ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF
Sbjct: 901  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 960

Query: 961  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITQ 1020
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALIT+
Sbjct: 961  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 1020

Query: 1021 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 1080
            QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV
Sbjct: 1021 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 1080

Query: 1081 EFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 1140
            EFSLSSDGGL FE RLCVPSDSAVKTELL EAHSSPFSMHPGSTKMYQDLKRVYWWRNMK
Sbjct: 1081 EFSLSSDGGLSFEGRLCVPSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 1140

Query: 1141 REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 1200
            REVAEFVS+CLVCQQVK PRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV
Sbjct: 1141 REVAEFVSKCLVCQQVKEPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 1200

Query: 1201 VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFIPNFG------ 1260
            VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARF   F       
Sbjct: 1201 VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTA 1260

Query: 1261 ------------------------------RVCRLLWARGSWDSHLHLMEFAYNNSYQAT 1320
                                          R C L +  GSWDSHLHLMEFAYNNSYQAT
Sbjct: 1261 MGTRLDFSTAFHPQADGQTERLNQVLEDMLRACALEFP-GSWDSHLHLMEFAYNNSYQAT 1320

Query: 1321 IGMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYAD 1380
            IGMAPFEALYG+CCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYAD
Sbjct: 1321 IGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYAD 1380

Query: 1381 VRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSL 1440
            VRRKDLEFEI DKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSL
Sbjct: 1381 VRRKDLEFEIRDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSL 1440

Query: 1441 STVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNKQIPLVK 1493
            STVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNK+IPLVK
Sbjct: 1441 STVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNKEIPLVK 1491

[Close]
BLAST of IVF0006176 vs. ExPASy TrEMBL
Match: A0A5A7VJE2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G005560 PE=4 SV=1)

HSP 1 Score: 2772.7 bits (7186), Expect = 0.0e+00
Identity = 1411/1529 (92.28%), Postives = 1431/1529 (93.59%), Query Frame = 0 

Query: 1    MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE 60
            MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE
Sbjct: 1    MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE 60

Query: 61   QQKPASPTPAPAPAPAPAPIPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 120
            QQKP SP PAPAPAPAPAP+PAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 61   QQKPVSPNPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 120

Query: 121  LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180
            LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW
Sbjct: 121  LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180

Query: 181  QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240
            QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD
Sbjct: 181  QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240

Query: 241  KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300
            KFVRGLRLDIQGLVRAFRPATH DALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
Sbjct: 241  KFVRGLRLDIQGLVRAFRPATHVDALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300

Query: 301  VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360
            VPVPQRNFR GGEFR FQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH
Sbjct: 301  VPVPQRNFRSGGEFRYFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360

Query: 361  TADRCPLRVTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGS 420
            TADRCPLR+TGIAQNQGAGAPHQGRVFATNRTEAEKAGT+VTGTLPVLGHYALVLF SGS
Sbjct: 361  TADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTIVTGTLPVLGHYALVLFYSGS 420

Query: 421  SHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 480
            SHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD
Sbjct: 421  SHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 480

Query: 481  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 540
            MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL
Sbjct: 481  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 540

Query: 541  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600
            SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELE GTVPI
Sbjct: 541  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELESGTVPI 600

Query: 601  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 660
            SRAPYRMAPAELK+LKVQLQELLDKG                              ELNK
Sbjct: 601  SRAPYRMAPAELKDLKVQLQELLDKG------------------------------ELNK 660

Query: 661  VTVKNRYPLPRIDDLFDQLQEATV-SKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIV 720
            VTVKNRYPLPRIDDLFDQLQ ATV SKIDLRSGYHQLRIKDED+PKT FRSRYGHYEFIV
Sbjct: 661  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTTFRSRYGHYEFIV 720

Query: 721  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRLVLQTLRDNK 780
            MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRD K
Sbjct: 721  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDYK 780

Query: 781  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 840
            LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGL GYYR
Sbjct: 781  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLVGYYR 840

Query: 841  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSD 900
            RFVENFSRIATPLTQLTRKG PFVWSKACEDSFQ LKQKLVTAPVLTVPDGSG+FVIYSD
Sbjct: 841  RFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 900

Query: 901  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 960
            ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF
Sbjct: 901  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 960

Query: 961  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITQ 1020
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHS ALIT+
Sbjct: 961  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSVALITR 1020

Query: 1021 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 1080
            QAPLHRDLERAEIAVS+GAVTMQLA+L VQPTLRQRIIDAQ NDPYLVEKRGL EAGQ  
Sbjct: 1021 QAPLHRDLERAEIAVSMGAVTMQLARLAVQPTLRQRIIDAQGNDPYLVEKRGLVEAGQTA 1080

Query: 1081 EFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 1140
            EFSLSSDGGLLFERRLCVPSDSAVK ELLSEAHSSPFSMHPGSTK+YQDLKRVYWWRNMK
Sbjct: 1081 EFSLSSDGGLLFERRLCVPSDSAVKIELLSEAHSSPFSMHPGSTKIYQDLKRVYWWRNMK 1140

Query: 1141 REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 1200
            REVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV
Sbjct: 1141 REVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 1200

Query: 1201 VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFIPNFG------ 1260
            VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARF   F       
Sbjct: 1201 VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTA 1260

Query: 1261 ------------------------------RVCRLLWARGSWDSHLHLMEFAYNNSYQAT 1320
                                          R C L +  GSWDSHLHLMEFAYNNSYQAT
Sbjct: 1261 MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP-GSWDSHLHLMEFAYNNSYQAT 1320

Query: 1321 IGMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYAD 1380
            IGMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYAD
Sbjct: 1321 IGMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYAD 1380

Query: 1381 VRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSL 1440
            VRRKDLEFE+GDKVFLKVAPM+GV+RFERRGKLSPRFVGPFEILERIGPVAYRLALPPSL
Sbjct: 1381 VRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSL 1440

Query: 1441 STVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNKQIPLVK 1493
            STVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSY E+PV+VLAREVKTLRNK+IPLVK
Sbjct: 1441 STVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTERPVKVLAREVKTLRNKEIPLVK 1498

[Close]
BLAST of IVF0006176 vs. ExPASy TrEMBL
Match: A0A5A7VPI8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold40G001640 PE=4 SV=1)

HSP 1 Score: 2713.7 bits (7033), Expect = 0.0e+00
Identity = 1381/1493 (92.50%), Postives = 1413/1493 (94.64%), Query Frame = 0 

Query: 1    MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE 60
            MPPRRGARRGGRGGRGRGAGRVQPEVQP A+A DPAAPVTHADLAAMEQRFRD+IMQMRE
Sbjct: 213  MPPRRGARRGGRGGRGRGAGRVQPEVQPEAKATDPAAPVTHADLAAMEQRFRDLIMQMRE 272

Query: 61   QQKPASPTPAPAPAPAPAPIPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 120
            QQ+PA P PAPA        PAPAPA VPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 273  QQQPAPPAPAPA--------PAPAPAAVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 332

Query: 121  LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180
            LEDPTRAQ+WLSSLETIF YMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW
Sbjct: 333  LEDPTRAQLWLSSLETIFCYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 392

Query: 181  QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240
            QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD
Sbjct: 393  QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 452

Query: 241  KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300
            KFVRGLRLDIQGLVRAFRP THADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
Sbjct: 453  KFVRGLRLDIQGLVRAFRPTTHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 512

Query: 301  VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360
            VPVPQRNFR GGEFR FQQKPFEAGEAARGKPLCTTCGK+HLGRCLFGTRTCFKCRQEGH
Sbjct: 513  VPVPQRNFRAGGEFRRFQQKPFEAGEAARGKPLCTTCGKYHLGRCLFGTRTCFKCRQEGH 572

Query: 361  TADRCPLRVTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGS 420
            TADRCPLR+TG AQNQGAGAPHQG+VFATN+TEAEKAGTVVTGTLPVLGHYALVLFDSGS
Sbjct: 573  TADRCPLRLTGNAQNQGAGAPHQGKVFATNKTEAEKAGTVVTGTLPVLGHYALVLFDSGS 632

Query: 421  SHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 480
            SHSFISS FV HARLEVEPLHHVLSVSTPSGECMLSKEKVK CQIEIAGHVIEVTL+VLD
Sbjct: 633  SHSFISSTFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKTCQIEIAGHVIEVTLLVLD 692

Query: 481  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 540
            MLDFDVILGMDWLAANHASIDCSRKEVTFNPPS ASFKFKG GS+SLPQVISAIRASKLL
Sbjct: 693  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSRASFKFKGEGSRSLPQVISAIRASKLL 752

Query: 541  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600
            SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIE EPGTVPI
Sbjct: 753  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIEFEPGTVPI 812

Query: 601  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 660
            SRAPYRMAP  LKELK+QLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK
Sbjct: 813  SRAPYRMAPTVLKELKMQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 872

Query: 661  VTVKNRYPLPRIDDLFDQLQEATV-SKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIV 720
            VTVKNRYPLPRIDDLFDQLQ ATV SKIDLRSGYHQLRIKD D+PKTAFRSRYGHYEFIV
Sbjct: 873  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIV 932

Query: 721  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRLVLQTLRDNK 780
            MSF LTNAPAVF+DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNK
Sbjct: 933  MSFCLTNAPAVFVDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 992

Query: 781  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 840
            LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 993  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 1052

Query: 841  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSD 900
            RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSG+FVIY D
Sbjct: 1053 RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYCD 1112

Query: 901  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 960
            ASKKGLGCVLMQQGKVVAYASRQLKSHE NYPTHDLELAAVVFALKIWRHYLYGEKIQIF
Sbjct: 1113 ASKKGLGCVLMQQGKVVAYASRQLKSHETNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 1172

Query: 961  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITQ 1020
            TDHKSLKYFFTQKELNMRQRRWLELVK+YDCEILYHPGKANVVADALSRKVSHSAALIT+
Sbjct: 1173 TDHKSLKYFFTQKELNMRQRRWLELVKEYDCEILYHPGKANVVADALSRKVSHSAALITR 1232

Query: 1021 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 1080
            QAPLHRDLERA+IAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA 
Sbjct: 1233 QAPLHRDLERAKIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAE 1292

Query: 1081 EFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 1140
             FS+SSD GL+FERRLCVPSDS +KTELLSEAHSSPFSMHPGSTKMYQDLKRVY WRNMK
Sbjct: 1293 GFSISSDDGLVFERRLCVPSDSVIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYCWRNMK 1352

Query: 1141 REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 1200
            REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV
Sbjct: 1353 REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 1412

Query: 1201 VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFIPNFGRVCRLL 1260
            VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARF   F +   L 
Sbjct: 1413 VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK--GLQ 1472

Query: 1261 WARGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQS 1320
             A G   + L L    +  ++  T               SPVCWGEVGEQRLMGPELVQS
Sbjct: 1473 TAMG---TRLDLSTAFHPQTHDQT--------------ESPVCWGEVGEQRLMGPELVQS 1532

Query: 1321 TNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPR 1380
            TNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFE+GDKVFLKVAPM+GV+RFERRGKLSPR
Sbjct: 1533 TNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPR 1592

Query: 1381 FVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSY 1440
            FVGPFEILE IGPVAYRLALPPSLSTVHDVF VSMLRKYVPDPSHVVDYEPLEIDENLSY
Sbjct: 1593 FVGPFEILEWIGPVAYRLALPPSLSTVHDVFQVSMLRKYVPDPSHVVDYEPLEIDENLSY 1652

Query: 1441 VEQPVEVLAREVKTLRNKQIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE 1493
             EQP+EVLAREVKTLRNK+IPLVKVLWRNHRVEEATWEREDDMRS YPELFE+
Sbjct: 1653 TEQPIEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSHYPELFEK 1678

[Close]
BLAST of IVF0006176 vs. ExPASy TrEMBL
Match: A0A5A7TGX4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold529G00100 PE=4 SV=1)

HSP 1 Score: 2691.0 bits (6974), Expect = 0.0e+00
Identity = 1375/1528 (89.99%), Postives = 1395/1528 (91.30%), Query Frame = 0 

Query: 1    MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE 60
            MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRD+IMQMRE
Sbjct: 89   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMRE 148

Query: 61   QQKPASPTPAPAPAPAPAPIPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 120
            QQKPASPTPAP+PAPAPAP PAP PAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 149  QQKPASPTPAPSPAPAPAPAPAPVPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 208

Query: 121  LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180
            LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW
Sbjct: 209  LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 268

Query: 181  QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240
            QQFKESFYAKFFSASLRDAK+QEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD
Sbjct: 269  QQFKESFYAKFFSASLRDAKQQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 328

Query: 241  KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300
            KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSK AGRGSTSGQKRKAEQ P
Sbjct: 329  KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKAAGRGSTSGQKRKAEQHP 388

Query: 301  VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360
            VPVPQRNFRPGGEFR FQQKPFEAGEAARGKPLCTTCGKHHLGRCLF TRTCFKCRQEGH
Sbjct: 389  VPVPQRNFRPGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFETRTCFKCRQEGH 448

Query: 361  TADRCPLRVTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGS 420
            TADRCPLR+TG AQNQGAGAPHQGRVFATN+TE EKAGTVVTGTLPVLGHYALVLFDSGS
Sbjct: 449  TADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEVEKAGTVVTGTLPVLGHYALVLFDSGS 508

Query: 421  SHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 480
            SHSFISSAFV HARLE                            IEIAGHVIEVTLIVLD
Sbjct: 509  SHSFISSAFVLHARLE----------------------------IEIAGHVIEVTLIVLD 568

Query: 481  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 540
            MLDFDVILGMDWLAANHASIDCSRKEVTFNPPS+ASFKFKGGGSKSLPQVISAIRASKLL
Sbjct: 569  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSLASFKFKGGGSKSLPQVISAIRASKLL 628

Query: 541  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600
            +QGTWGIL SVVDTRE DVSLSSEPVVRDYPDVFP+ELPGLPPHREVEFAIELEPGTVPI
Sbjct: 629  NQGTWGILVSVVDTREVDVSLSSEPVVRDYPDVFPDELPGLPPHREVEFAIELEPGTVPI 688

Query: 601  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 660
            SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK
Sbjct: 689  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 748

Query: 661  VTVKNRYPLPRIDDLFDQLQEATV-SKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIV 720
            VTVKNRYPLPRIDDLFDQLQ ATV S+IDLRSGYHQLRIKDED+PKTAFRSRYGHYEFIV
Sbjct: 749  VTVKNRYPLPRIDDLFDQLQGATVFSEIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV 808

Query: 721  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRLVLQTLRDNK 780
            MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTL DNK
Sbjct: 809  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLWDNK 868

Query: 781  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 840
            LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW RPSTVSEVRSFLGLAGYYR
Sbjct: 869  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWARPSTVSEVRSFLGLAGYYR 928

Query: 841  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSD 900
            +FVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTV DGSG+FVIYSD
Sbjct: 929  QFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVRDGSGSFVIYSD 988

Query: 901  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 960
            ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF
Sbjct: 989  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 1048

Query: 961  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITQ 1020
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALIT+
Sbjct: 1049 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 1108

Query: 1021 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 1080
            QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA 
Sbjct: 1109 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAA 1168

Query: 1081 EFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 1140
            EFSLSSDGGLLFER LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWW NMK
Sbjct: 1169 EFSLSSDGGLLFERHLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWHNMK 1228

Query: 1141 REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 1200
            REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV
Sbjct: 1229 REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 1288

Query: 1201 VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFIPNFG------ 1260
            VVDRLTK AHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVS+RDARF   F       
Sbjct: 1289 VVDRLTKLAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSNRDARFTSKFWKGLQTA 1348

Query: 1261 ------------------------------RVCRLLWARGSWDSHLHLMEFAYNNSYQAT 1320
                                          R C L +  GSWDSHLHLMEFAYNNSYQAT
Sbjct: 1349 MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP-GSWDSHLHLMEFAYNNSYQAT 1408

Query: 1321 IGMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYAD 1380
            IGMAPFEALYG+CCRSPVCWGEV                                    D
Sbjct: 1409 IGMAPFEALYGKCCRSPVCWGEV------------------------------------D 1468

Query: 1381 VRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSL 1440
            VRRKDLEFE+GDKVFLKVAPM+GVLRFERRGKLSPRFVGPFEILERIGPVAYRL LPPSL
Sbjct: 1469 VRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLVLPPSL 1528

Query: 1441 STVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNKQIPLVK 1492
            STVHDV HVSMLRKYVPDPSHVVDYEPLEIDENLSY EQPVEVLAREVKTLRNK+IPLVK
Sbjct: 1529 STVHDVIHVSMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVEVLAREVKTLRNKEIPLVK 1551

[Close]
BLAST of IVF0006176 vs. NCBI nr
Match: KAA0048687.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2784 bits (7216), Expect = 0.0
Identity = 1417/1526 (92.86%), Postives = 1438/1526 (94.23%), Query Frame = 0 

Query: 1    MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE 60
            MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRD+IMQMRE
Sbjct: 1    MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMRE 60

Query: 61   QQKPASPTPAPAPAPAPAPIPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 120
            QQKPASPTPAPAPAPAPAP PAPA APVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 61   QQKPASPTPAPAPAPAPAPAPAPALAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 120

Query: 121  LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180
            LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW
Sbjct: 121  LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180

Query: 181  QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240
            QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD
Sbjct: 181  QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240

Query: 241  KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300
            KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRG TSGQKRKAEQQP
Sbjct: 241  KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGLTSGQKRKAEQQP 300

Query: 301  VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360
            VPVPQRNFR GGEFR FQQKPFEAGEAAR KPLCT CGKHHLGRCLFGTRTCFKCRQEGH
Sbjct: 301  VPVPQRNFRSGGEFRRFQQKPFEAGEAARWKPLCTICGKHHLGRCLFGTRTCFKCRQEGH 360

Query: 361  TADRCPLRVTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGS 420
            TADRCPLR+TG AQNQGAGAPHQGRVFATN+TEAEKAGTVVTGTLPVLGHYALVLFDS  
Sbjct: 361  TADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTGTLPVLGHYALVLFDS-- 420

Query: 421  SHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 480
                                     VSTPSGECMLSKEKVK CQIEIAGHVIEVTL+VLD
Sbjct: 421  -------------------------VSTPSGECMLSKEKVKTCQIEIAGHVIEVTLLVLD 480

Query: 481  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 540
            MLDFDVILGMDWLAA+HASIDCSRKEVTFNPPS ASFKFKGGGS+SLPQVISAIRASKLL
Sbjct: 481  MLDFDVILGMDWLAAHHASIDCSRKEVTFNPPSRASFKFKGGGSRSLPQVISAIRASKLL 540

Query: 541  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600
            SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 541  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600

Query: 601  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 660
            SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK
Sbjct: 601  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 660

Query: 661  VTVKNRYPLPRIDDLFDQLQEATV-SKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIV 720
            VTVKNRYPLPRIDDLFDQLQ ATV SKIDLRSGYHQLRIKDED+PKTAFRSRYGHYEFIV
Sbjct: 661  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV 720

Query: 721  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRLVLQTLRDNK 780
            MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNK
Sbjct: 721  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 780

Query: 781  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 840
            LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 781  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 840

Query: 841  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSD 900
            RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSG+FVIYSD
Sbjct: 841  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 900

Query: 901  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 960
            ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF
Sbjct: 901  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 960

Query: 961  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITQ 1020
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALIT+
Sbjct: 961  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 1020

Query: 1021 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 1080
            QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV
Sbjct: 1021 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 1080

Query: 1081 EFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 1140
            EFSLSSDGGLLFERRLCVPSDS VKTELLSEAHSSPFSMHPGSTKMY+D+KRVYWWRNMK
Sbjct: 1081 EFSLSSDGGLLFERRLCVPSDSVVKTELLSEAHSSPFSMHPGSTKMYRDVKRVYWWRNMK 1140

Query: 1141 REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 1200
            REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV
Sbjct: 1141 REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 1200

Query: 1201 VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFIPNFG------ 1260
            VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARF   F       
Sbjct: 1201 VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKSLQTA 1260

Query: 1261 ------------------------------RVCRLLWARGSWDSHLHLMEFAYNNSYQAT 1320
                                          R C L +  GSWDSHLHLMEF YNNSYQAT
Sbjct: 1261 MGTRLDFSTAFHPQTDGQTERLNQVLEYMLRACALEFP-GSWDSHLHLMEFVYNNSYQAT 1320

Query: 1321 IGMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYAD 1380
            IGMAPFEALYG+CCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYAD
Sbjct: 1321 IGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYAD 1380

Query: 1381 VRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSL 1440
            VRRKDLEFE+GDKVFLKVAPM+GVLRFERRGKLSPRF+GPFEILERIGPVAYRLALPPSL
Sbjct: 1381 VRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFIGPFEILERIGPVAYRLALPPSL 1440

Query: 1441 STVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNKQIPLVK 1489
            STVHDVFHVSMLRKYVPDPSHVVDY+PL+IDENLSY EQPVEVLAREVKTLRNK+IPLVK
Sbjct: 1441 STVHDVFHVSMLRKYVPDPSHVVDYKPLKIDENLSYTEQPVEVLAREVKTLRNKEIPLVK 1498

[Close]
BLAST of IVF0006176 vs. NCBI nr
Match: KAA0051357.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2779 bits (7204), Expect = 0.0
Identity = 1421/1529 (92.94%), Postives = 1435/1529 (93.85%), Query Frame = 0 

Query: 1    MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE 60
            MPPRRGARRGGRGGRGRGAGRVQPE                                   
Sbjct: 1    MPPRRGARRGGRGGRGRGAGRVQPE----------------------------------- 60

Query: 61   QQKPASPTPAPAPAPAPAPIPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 120
              KPASPTPAPAPAPAPAP+PAPAPA VPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 61   --KPASPTPAPAPAPAPAPVPAPAPALVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 120

Query: 121  LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180
            LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW
Sbjct: 121  LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180

Query: 181  QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240
            QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD
Sbjct: 181  QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240

Query: 241  KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300
            KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQE ANSSKTAGRGSTSGQKRKAEQQP
Sbjct: 241  KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQEMANSSKTAGRGSTSGQKRKAEQQP 300

Query: 301  VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360
            VPVPQRNFR GGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH
Sbjct: 301  VPVPQRNFRSGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360

Query: 361  TADRCPLRVTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGS 420
            TADRCPLR+TGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGS
Sbjct: 361  TADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGS 420

Query: 421  SHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 480
            SHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLS+EKVKACQIEIAGHVIEVTLIVLD
Sbjct: 421  SHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSREKVKACQIEIAGHVIEVTLIVLD 480

Query: 481  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 540
            MLDFDVILGMDWLAANHASIDCSRK+VTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL
Sbjct: 481  MLDFDVILGMDWLAANHASIDCSRKDVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 540

Query: 541  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600
            SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 541  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600

Query: 601  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 660
            SRAPYRMAPAELKELKVQLQELLDKGFIRP+VSPWGAPVLFVKKKDGSMRLCIDYRELNK
Sbjct: 601  SRAPYRMAPAELKELKVQLQELLDKGFIRPNVSPWGAPVLFVKKKDGSMRLCIDYRELNK 660

Query: 661  VTVKNRYPLPRIDDLFDQLQEATV-SKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIV 720
            VTVKNRYPLPRIDDLFDQLQ ATV SKIDLRSGY+QLRIKDED+PKTAFRSRYGHYEFIV
Sbjct: 661  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYNQLRIKDEDVPKTAFRSRYGHYEFIV 720

Query: 721  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRLVLQTLRDNK 780
            MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNK
Sbjct: 721  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 780

Query: 781  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 840
            LYAKFSKCEFWLKQVSFLGHVVSKA VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 781  LYAKFSKCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 840

Query: 841  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSD 900
            RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSG+FVIYSD
Sbjct: 841  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 900

Query: 901  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 960
            ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF
Sbjct: 901  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 960

Query: 961  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITQ 1020
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALIT+
Sbjct: 961  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 1020

Query: 1021 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 1080
            QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV
Sbjct: 1021 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 1080

Query: 1081 EFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 1140
            EFSLSSDGGL FE RLCVPSDSAVKTELL EAHSSPFSMHPGSTKMYQDLKRVYWWRNMK
Sbjct: 1081 EFSLSSDGGLSFEGRLCVPSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 1140

Query: 1141 REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 1200
            REVAEFVS+CLVCQQVK PRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV
Sbjct: 1141 REVAEFVSKCLVCQQVKEPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 1200

Query: 1201 VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFIPNFG------ 1260
            VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARF   F       
Sbjct: 1201 VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTA 1260

Query: 1261 ------------------------------RVCRLLWARGSWDSHLHLMEFAYNNSYQAT 1320
                                          R C L +  GSWDSHLHLMEFAYNNSYQAT
Sbjct: 1261 MGTRLDFSTAFHPQADGQTERLNQVLEDMLRACALEFP-GSWDSHLHLMEFAYNNSYQAT 1320

Query: 1321 IGMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYAD 1380
            IGMAPFEALYG+CCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYAD
Sbjct: 1321 IGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYAD 1380

Query: 1381 VRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSL 1440
            VRRKDLEFEI DKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSL
Sbjct: 1381 VRRKDLEFEIRDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSL 1440

Query: 1441 STVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNKQIPLVK 1492
            STVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNK+IPLVK
Sbjct: 1441 STVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNKEIPLVK 1491

[Close]
BLAST of IVF0006176 vs. NCBI nr
Match: KAA0066456.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2768 bits (7175), Expect = 0.0
Identity = 1411/1528 (92.34%), Postives = 1430/1528 (93.59%), Query Frame = 0 

Query: 1    MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE 60
            MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE
Sbjct: 1    MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE 60

Query: 61   QQKPASPTPAPAPAPAPAPIPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 120
            QQKP SP PAPAPAPAPAP+PAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 61   QQKPVSPNPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 120

Query: 121  LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180
            LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW
Sbjct: 121  LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180

Query: 181  QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240
            QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD
Sbjct: 181  QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240

Query: 241  KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300
            KFVRGLRLDIQGLVRAFRPATH DALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
Sbjct: 241  KFVRGLRLDIQGLVRAFRPATHVDALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300

Query: 301  VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360
            VPVPQRNFR GGEFR FQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH
Sbjct: 301  VPVPQRNFRSGGEFRYFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360

Query: 361  TADRCPLRVTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGS 420
            TADRCPLR+TGIAQNQGAGAPHQGRVFATNRTEAEKAGT+VTGTLPVLGHYALVLF SGS
Sbjct: 361  TADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTIVTGTLPVLGHYALVLFYSGS 420

Query: 421  SHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 480
            SHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD
Sbjct: 421  SHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 480

Query: 481  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 540
            MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL
Sbjct: 481  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 540

Query: 541  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600
            SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELE GTVPI
Sbjct: 541  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELESGTVPI 600

Query: 601  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 660
            SRAPYRMAPAELK+LKVQLQELLDKG                              ELNK
Sbjct: 601  SRAPYRMAPAELKDLKVQLQELLDKG------------------------------ELNK 660

Query: 661  VTVKNRYPLPRIDDLFDQLQEATV-SKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIV 720
            VTVKNRYPLPRIDDLFDQLQ ATV SKIDLRSGYHQLRIKDED+PKT FRSRYGHYEFIV
Sbjct: 661  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTTFRSRYGHYEFIV 720

Query: 721  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRLVLQTLRDNK 780
            MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRD K
Sbjct: 721  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDYK 780

Query: 781  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 840
            LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGL GYYR
Sbjct: 781  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLVGYYR 840

Query: 841  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSD 900
            RFVENFSRIATPLTQLTRKG PFVWSKACEDSFQ LKQKLVTAPVLTVPDGSG+FVIYSD
Sbjct: 841  RFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 900

Query: 901  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 960
            ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF
Sbjct: 901  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 960

Query: 961  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITQ 1020
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHS ALIT+
Sbjct: 961  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSVALITR 1020

Query: 1021 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 1080
            QAPLHRDLERAEIAVS+GAVTMQLA+L VQPTLRQRIIDAQ NDPYLVEKRGL EAGQ  
Sbjct: 1021 QAPLHRDLERAEIAVSMGAVTMQLARLAVQPTLRQRIIDAQGNDPYLVEKRGLVEAGQTA 1080

Query: 1081 EFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 1140
            EFSLSSDGGLLFERRLCVPSDSAVK ELLSEAHSSPFSMHPGSTK+YQDLKRVYWWRNMK
Sbjct: 1081 EFSLSSDGGLLFERRLCVPSDSAVKIELLSEAHSSPFSMHPGSTKIYQDLKRVYWWRNMK 1140

Query: 1141 REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 1200
            REVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV
Sbjct: 1141 REVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 1200

Query: 1201 VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFIPNFG------ 1260
            VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARF   F       
Sbjct: 1201 VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTA 1260

Query: 1261 ------------------------------RVCRLLWARGSWDSHLHLMEFAYNNSYQAT 1320
                                          R C L +  GSWDSHLHLMEFAYNNSYQAT
Sbjct: 1261 MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP-GSWDSHLHLMEFAYNNSYQAT 1320

Query: 1321 IGMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYAD 1380
            IGMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYAD
Sbjct: 1321 IGMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYAD 1380

Query: 1381 VRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSL 1440
            VRRKDLEFE+GDKVFLKVAPM+GV+RFERRGKLSPRFVGPFEILERIGPVAYRLALPPSL
Sbjct: 1381 VRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSL 1440

Query: 1441 STVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNKQIPLVK 1491
            STVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSY E+PV+VLAREVKTLRNK+IPLVK
Sbjct: 1441 STVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTERPVKVLAREVKTLRNKEIPLVK 1497

[Close]
BLAST of IVF0006176 vs. NCBI nr
Match: KAA0067481.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2709 bits (7021), Expect = 0.0
Identity = 1380/1492 (92.49%), Postives = 1412/1492 (94.64%), Query Frame = 0 

Query: 1    MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE 60
            MPPRRGARRGGRGGRGRGAGRVQPEVQP A+A DPAAPVTHADLAAMEQRFRD+IMQMRE
Sbjct: 213  MPPRRGARRGGRGGRGRGAGRVQPEVQPEAKATDPAAPVTHADLAAMEQRFRDLIMQMRE 272

Query: 61   QQKPASPTPAPAPAPAPAPIPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 120
            QQ+PA P PAPAPAPAPA +        PVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 273  QQQPAPPAPAPAPAPAPAAV--------PVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 332

Query: 121  LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180
            LEDPTRAQ+WLSSLETIF YMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW
Sbjct: 333  LEDPTRAQLWLSSLETIFCYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 392

Query: 181  QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240
            QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD
Sbjct: 393  QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 452

Query: 241  KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300
            KFVRGLRLDIQGLVRAFRP THADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
Sbjct: 453  KFVRGLRLDIQGLVRAFRPTTHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 512

Query: 301  VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360
            VPVPQRNFR GGEFR FQQKPFEAGEAARGKPLCTTCGK+HLGRCLFGTRTCFKCRQEGH
Sbjct: 513  VPVPQRNFRAGGEFRRFQQKPFEAGEAARGKPLCTTCGKYHLGRCLFGTRTCFKCRQEGH 572

Query: 361  TADRCPLRVTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGS 420
            TADRCPLR+TG AQNQGAGAPHQG+VFATN+TEAEKAGTVVTGTLPVLGHYALVLFDSGS
Sbjct: 573  TADRCPLRLTGNAQNQGAGAPHQGKVFATNKTEAEKAGTVVTGTLPVLGHYALVLFDSGS 632

Query: 421  SHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 480
            SHSFISS FV HARLEVEPLHHVLSVSTPSGECMLSKEKVK CQIEIAGHVIEVTL+VLD
Sbjct: 633  SHSFISSTFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKTCQIEIAGHVIEVTLLVLD 692

Query: 481  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 540
            MLDFDVILGMDWLAANHASIDCSRKEVTFNPPS ASFKFKG GS+SLPQVISAIRASKLL
Sbjct: 693  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSRASFKFKGEGSRSLPQVISAIRASKLL 752

Query: 541  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600
            SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIE EPGTVPI
Sbjct: 753  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIEFEPGTVPI 812

Query: 601  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 660
            SRAPYRMAP  LKELK+QLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK
Sbjct: 813  SRAPYRMAPTVLKELKMQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 872

Query: 661  VTVKNRYPLPRIDDLFDQLQEATV-SKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIV 720
            VTVKNRYPLPRIDDLFDQLQ ATV SKIDLRSGYHQLRIKD D+PKTAFRSRYGHYEFIV
Sbjct: 873  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIV 932

Query: 721  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRLVLQTLRDNK 780
            MSF LTNAPAVF+DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNK
Sbjct: 933  MSFCLTNAPAVFVDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 992

Query: 781  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 840
            LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 993  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 1052

Query: 841  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSD 900
            RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSG+FVIY D
Sbjct: 1053 RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYCD 1112

Query: 901  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 960
            ASKKGLGCVLMQQGKVVAYASRQLKSHE NYPTHDLELAAVVFALKIWRHYLYGEKIQIF
Sbjct: 1113 ASKKGLGCVLMQQGKVVAYASRQLKSHETNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 1172

Query: 961  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITQ 1020
            TDHKSLKYFFTQKELNMRQRRWLELVK+YDCEILYHPGKANVVADALSRKVSHSAALIT+
Sbjct: 1173 TDHKSLKYFFTQKELNMRQRRWLELVKEYDCEILYHPGKANVVADALSRKVSHSAALITR 1232

Query: 1021 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 1080
            QAPLHRDLERA+IAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA 
Sbjct: 1233 QAPLHRDLERAKIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAE 1292

Query: 1081 EFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 1140
             FS+SSD GL+FERRLCVPSDS +KTELLSEAHSSPFSMHPGSTKMYQDLKRVY WRNMK
Sbjct: 1293 GFSISSDDGLVFERRLCVPSDSVIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYCWRNMK 1352

Query: 1141 REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 1200
            REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV
Sbjct: 1353 REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 1412

Query: 1201 VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFIPNFGRVCRLL 1260
            VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARF   F +   L 
Sbjct: 1413 VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK--GLQ 1472

Query: 1261 WARGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQS 1320
             A G+    L L    +  ++  T               SPVCWGEVGEQRLMGPELVQS
Sbjct: 1473 TAMGT---RLDLSTAFHPQTHDQT--------------ESPVCWGEVGEQRLMGPELVQS 1532

Query: 1321 TNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPR 1380
            TNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFE+GDKVFLKVAPM+GV+RFERRGKLSPR
Sbjct: 1533 TNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPR 1592

Query: 1381 FVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSY 1440
            FVGPFEILE IGPVAYRLALPPSLSTVHDVF VSMLRKYVPDPSHVVDYEPLEIDENLSY
Sbjct: 1593 FVGPFEILEWIGPVAYRLALPPSLSTVHDVFQVSMLRKYVPDPSHVVDYEPLEIDENLSY 1652

Query: 1441 VEQPVEVLAREVKTLRNKQIPLVKVLWRNHRVEEATWEREDDMRSRYPELFE 1491
             EQP+EVLAREVKTLRNK+IPLVKVLWRNHRVEEATWEREDDMRS YPELFE
Sbjct: 1653 TEQPIEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSHYPELFE 1677

[Close]
BLAST of IVF0006176 vs. NCBI nr
Match: KAA0040695.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2687 bits (6964), Expect = 0.0
Identity = 1374/1528 (89.92%), Postives = 1395/1528 (91.30%), Query Frame = 0 

Query: 1    MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE 60
            MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRD+IMQMRE
Sbjct: 89   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMRE 148

Query: 61   QQKPASPTPAPAPAPAPAPIPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 120
            QQKPASPTPAP+PAPAPAP PAP PAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 149  QQKPASPTPAPSPAPAPAPAPAPVPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 208

Query: 121  LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180
            LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW
Sbjct: 209  LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 268

Query: 181  QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240
            QQFKESFYAKFFSASLRDAK+QEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD
Sbjct: 269  QQFKESFYAKFFSASLRDAKQQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 328

Query: 241  KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300
            KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSK AGRGSTSGQKRKAEQ P
Sbjct: 329  KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKAAGRGSTSGQKRKAEQHP 388

Query: 301  VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360
            VPVPQRNFRPGGEFR FQQKPFEAGEAARGKPLCTTCGKHHLGRCLF TRTCFKCRQEGH
Sbjct: 389  VPVPQRNFRPGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFETRTCFKCRQEGH 448

Query: 361  TADRCPLRVTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGS 420
            TADRCPLR+TG AQNQGAGAPHQGRVFATN+TE EKAGTVVTGTLPVLGHYALVLFDSGS
Sbjct: 449  TADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEVEKAGTVVTGTLPVLGHYALVLFDSGS 508

Query: 421  SHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 480
            SHSFISSAFV HARLE+E                            IAGHVIEVTLIVLD
Sbjct: 509  SHSFISSAFVLHARLEIE----------------------------IAGHVIEVTLIVLD 568

Query: 481  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 540
            MLDFDVILGMDWLAANHASIDCSRKEVTFNPPS+ASFKFKGGGSKSLPQVISAIRASKLL
Sbjct: 569  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSLASFKFKGGGSKSLPQVISAIRASKLL 628

Query: 541  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600
            +QGTWGIL SVVDTRE DVSLSSEPVVRDYPDVFP+ELPGLPPHREVEFAIELEPGTVPI
Sbjct: 629  NQGTWGILVSVVDTREVDVSLSSEPVVRDYPDVFPDELPGLPPHREVEFAIELEPGTVPI 688

Query: 601  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 660
            SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK
Sbjct: 689  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 748

Query: 661  VTVKNRYPLPRIDDLFDQLQEATV-SKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIV 720
            VTVKNRYPLPRIDDLFDQLQ ATV S+IDLRSGYHQLRIKDED+PKTAFRSRYGHYEFIV
Sbjct: 749  VTVKNRYPLPRIDDLFDQLQGATVFSEIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV 808

Query: 721  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRLVLQTLRDNK 780
            MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTL DNK
Sbjct: 809  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLWDNK 868

Query: 781  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 840
            LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW RPSTVSEVRSFLGLAGYYR
Sbjct: 869  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWARPSTVSEVRSFLGLAGYYR 928

Query: 841  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSD 900
            +FVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTV DGSG+FVIYSD
Sbjct: 929  QFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVRDGSGSFVIYSD 988

Query: 901  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 960
            ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF
Sbjct: 989  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 1048

Query: 961  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITQ 1020
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALIT+
Sbjct: 1049 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 1108

Query: 1021 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 1080
            QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA 
Sbjct: 1109 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAA 1168

Query: 1081 EFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 1140
            EFSLSSDGGLLFER LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWW NMK
Sbjct: 1169 EFSLSSDGGLLFERHLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWHNMK 1228

Query: 1141 REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 1200
            REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV
Sbjct: 1229 REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 1288

Query: 1201 VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFIPNFG------ 1260
            VVDRLTK AHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVS+RDARF   F       
Sbjct: 1289 VVDRLTKLAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSNRDARFTSKFWKGLQTA 1348

Query: 1261 ------------------------------RVCRLLWARGSWDSHLHLMEFAYNNSYQAT 1320
                                          R C L +  GSWDSHLHLMEFAYNNSYQAT
Sbjct: 1349 MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP-GSWDSHLHLMEFAYNNSYQAT 1408

Query: 1321 IGMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYAD 1380
            IGMAPFEALYG+CCRSPVCWGEV                                    D
Sbjct: 1409 IGMAPFEALYGKCCRSPVCWGEV------------------------------------D 1468

Query: 1381 VRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSL 1440
            VRRKDLEFE+GDKVFLKVAPM+GVLRFERRGKLSPRFVGPFEILERIGPVAYRL LPPSL
Sbjct: 1469 VRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLVLPPSL 1528

Query: 1441 STVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNKQIPLVK 1491
            STVHDV HVSMLRKYVPDPSHVVDYEPLEIDENLSY EQPVEVLAREVKTLRNK+IPLVK
Sbjct: 1529 STVHDVIHVSMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVEVLAREVKTLRNKEIPLVK 1551

[Close]
BLAST of IVF0006176 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 120.9 bits (302), Expect = 8.5e-27
Identity = 57/125 (45.60%), Postives = 81/125 (64.80%), Query Frame = 0 

Query: 767 HLRLVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPST 826
           HL +VLQ    ++ YA   KC F   Q+++LG  H++S  GVS DPAK+EA+ GW  P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 827 VSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPV 886
            +E+R FLGL GYYRRFV+N+ +I  PLT+L +K +   W++    +F+ LK  + T PV
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS-LKWTEMAALAFKALKGAVTTLPV 122

Query: 887 LTVPD 890
           L +PD
Sbjct: 123 LALPD 126

The following BLAST results are available for this feature:
BLAST of IVF0006176 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P0CT418.0e-12331.13Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... [more]
P0CT348.0e-12331.13Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
P0CT358.0e-12331.13Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
P0CT368.0e-12331.13Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
P0CT378.0e-12331.13Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
BLAST of IVF0006176 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7U3300.0e+0092.74Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43... [more]
A0A5A7UAA80.0e+0092.94Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55... [more]
A0A5A7VJE20.0e+0092.28Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21... [more]
A0A5A7VPI80.0e+0092.50Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold40... [more]
A0A5A7TGX40.0e+0089.99Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold52... [more]
BLAST of IVF0006176 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0048687.10.092.86pol protein [Cucumis melo var. makuwa][more]
KAA0051357.10.092.94pol protein [Cucumis melo var. makuwa][more]
KAA0066456.10.092.34pol protein [Cucumis melo var. makuwa][more]
KAA0067481.10.092.49pol protein [Cucumis melo var. makuwa][more]
KAA0040695.10.089.92pol protein [Cucumis melo var. makuwa][more]
BLAST of IVF0006176 vs. TAIR 10
Match NameE-valueIdentityDescription
ATMG00860.18.5e-2745.60DNA/RNA polymerases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041373Reverse transcriptase, RNase H-like domainPFAMPF17917RT_RNaseHcoord: 892..988
e-value: 6.9E-34
score: 116.3
NoneNo IPR availableGENE3D1.10.340.70coord: 1067..1156
e-value: 1.0E-17
score: 66.1
NoneNo IPR availableGENE3D3.10.10.10HIV Type 1 Reverse Transcriptase, subunit A, domain 1coord: 588..726
e-value: 9.5E-91
score: 304.8
NoneNo IPR availablePFAMPF08284RVP_2coord: 383..511
e-value: 6.9E-43
score: 145.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..46
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 279..296
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 279..315
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 66..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..15
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 113..1015
NoneNo IPR availablePANTHERPTHR24559:SF383DNA/RNA POLYMERASES SUPERFAMILY PROTEINcoord: 113..1015
NoneNo IPR availableCDDcd09274RNase_HI_RT_Ty3coord: 895..1010
e-value: 2.2211E-58
score: 194.634
NoneNo IPR availableCDDcd00303retropepsin_likecoord: 429..494
e-value: 2.13069E-12
score: 62.354
NoneNo IPR availableCDDcd01647RT_LTRcoord: 626..801
e-value: 1.27039E-91
score: 291.807
IPR041588Integrase zinc-binding domainPFAMPF17921Integrase_H2C2coord: 1101..1157
e-value: 7.9E-17
score: 61.1
IPR005162Retrotransposon gag domainPFAMPF03732Retrotrans_gagcoord: 151..247
e-value: 3.7E-15
score: 56.0
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 667..801
e-value: 9.5E-91
score: 304.8
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 811..901
e-value: 1.9E-30
score: 106.7
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 642..800
e-value: 2.7E-26
score: 92.5
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 623..801
score: 10.577034
IPR021109Aspartic peptidase domain superfamilyGENE3D2.40.70.10Acid Proteasescoord: 388..518
e-value: 5.4E-23
score: 83.2
IPR021109Aspartic peptidase domain superfamilySUPERFAMILY50630Acid proteasescoord: 405..501
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1166..1257
e-value: 2.4E-14
score: 55.0
coord: 1258..1338
e-value: 4.0E-7
score: 31.5
IPR001969Aspartic peptidase, active sitePROSITEPS00141ASP_PROTEASEcoord: 414..425
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 352..366
score: 9.438442
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 1169..1292
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 566..994

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0006176.1IVF0006176.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0006508 proteolysis
biological_process GO:0006278 RNA-dependent DNA biosynthetic process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004190 aspartic-type endopeptidase activity
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003964 RNA-directed DNA polymerase activity
molecular_function GO:0008270 zinc ion binding