IVF0005869 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACATATTGCGACGACGTTGAGGACGAGGACGAGGGGGACTCCACGTACGCGACGACCACCACTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCAGTGGCACGACGACCTAGCCGAATCGATGTTCACCGATTGGCAGTTGCGTAACGCTTAG ATGACATATTGCGACGACGTTGAGGACGAGGACGAGGGGGACTCCACGTACGCGACGACCACCACTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCAGTGGCACGACGACCTAGCCGAATCGATGTTCACCGATTGGCAGTTGCGTAACGCTTAG ATGACATATTGCGACGACGTTGAGGACGAGGACGAGGGGGACTCCACGTACGCGACGACCACCACTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCAGTGGCACGACGACCTAGCCGAATCGATGTTCACCGATTGGCAGTTGCGTAACGCTTAG MTYCDDVEDEDEGDSTYATTTTSEDIQYIETTNEWSQWHDDLAESMFTDWQLRNA Homology
BLAST of IVF0005869 vs. ExPASy TrEMBL
Match: A0A5A7VL61 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold238G001220 PE=3 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 3.1e-23 Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of IVF0005869 vs. ExPASy TrEMBL
Match: A0A5A7SMB5 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G001310 PE=3 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 7.5e-22 Identity = 52/55 (94.55%), Postives = 54/55 (98.18%), Query Frame = 0
BLAST of IVF0005869 vs. ExPASy TrEMBL
Match: A0A5D3CHC3 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25G00340 PE=3 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 9.9e-22 Identity = 52/55 (94.55%), Postives = 54/55 (98.18%), Query Frame = 0
BLAST of IVF0005869 vs. ExPASy TrEMBL
Match: A0A5A7TUU4 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G003210 PE=3 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 9.9e-22 Identity = 53/55 (96.36%), Postives = 53/55 (96.36%), Query Frame = 0
BLAST of IVF0005869 vs. ExPASy TrEMBL
Match: A0A5A7USE5 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold186G001970 PE=3 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 2.2e-21 Identity = 51/55 (92.73%), Postives = 53/55 (96.36%), Query Frame = 0
BLAST of IVF0005869 vs. NCBI nr
Match: KAA0068154.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 114 bits (286), Expect = 7.59e-29 Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of IVF0005869 vs. NCBI nr
Match: KAA0038851.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 105 bits (263), Expect = 1.47e-28 Identity = 51/55 (92.73%), Postives = 51/55 (92.73%), Query Frame = 0
BLAST of IVF0005869 vs. NCBI nr
Match: KAA0062284.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 106 bits (265), Expect = 3.07e-28 Identity = 50/55 (90.91%), Postives = 53/55 (96.36%), Query Frame = 0
BLAST of IVF0005869 vs. NCBI nr
Match: TYK05336.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 105 bits (263), Expect = 6.20e-28 Identity = 50/55 (90.91%), Postives = 53/55 (96.36%), Query Frame = 0
BLAST of IVF0005869 vs. NCBI nr
Match: KAA0041029.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 104 bits (260), Expect = 1.78e-27 Identity = 51/55 (92.73%), Postives = 51/55 (92.73%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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