Homology
BLAST of IVF0005726 vs. ExPASy Swiss-Prot
Match:
Q39061 (RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP33 PE=2 SV=1)
HSP 1 Score: 102.4 bits (254), Expect = 8.0e-21
Identity = 82/281 (29.18%), Postives = 145/281 (51.60%), Query Frame = 0
Query: 30 CHNPLISIMAKRTSKFVFQF---ASTSQDEAVSS-------------SPSDIEEFSRT-- 89
C NPLI R +F AS++ DE +S ++EE +T
Sbjct: 51 CPNPLILHSNIRRHRFFCAAETEASSADDEIQASVEEEEEVEEEGDEGEEEVEEEKQTTQ 110
Query: 90 ------RLLAQNVPWDSTPEDIRSLFEKYGTVLDVELSMYNKI--RNRGLAFVTMGSPEE 149
RL N+P+ T ++ +F + GTV+DV++ +Y+K+ R+RG FVTMGS EE
Sbjct: 111 ASGEEGRLYVGNLPYTITSSELSQIFGEAGTVVDVQI-VYDKVTDRSRGFGFVTMGSIEE 170
Query: 150 ALAALNNLESYEFEGRTLRLNYAKLKKEKPSPPVKPKPVTFN---------LFVANLPFE 209
A A+ S + GRT+++N+ ++ + + ++ K N ++ NL +
Sbjct: 171 AKEAMQMFNSSQIGGRTVKVNFPEVPRGGENEVMRTKIRDNNRSYVDSPHKVYAGNLGWN 230
Query: 210 ARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKAKKDAEAAISEFQGKTFMGR 269
++ L++ F G V+ A++I+ N RS G+GF++F++ ++ ++A++ G GR
Sbjct: 231 LTSQGLKDAFGDQPG-VLGAKVIYERNTGRSRGFGFISFESAENVQSALATMNGVEVEGR 290
Query: 270 SLRV----ARSKQFVKLPSEEKSQSEDASTDGVE-LANAAA 271
+LR+ R K V PS E+ ++E+AS + E L+N +A
Sbjct: 291 ALRLNLASEREKPTVSPPSVEEGETEEASLESNEVLSNVSA 329
BLAST of IVF0005726 vs. ExPASy Swiss-Prot
Match:
P19682 (28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=1)
HSP 1 Score: 97.4 bits (241), Expect = 2.6e-19
Identity = 78/260 (30.00%), Postives = 129/260 (49.62%), Query Frame = 0
Query: 5 SSYPINGDFNLSVSRSSPSLLSTSICHNPLISIMAKRTSKFVFQFASTSQD--------- 64
SSYP LS ++ P LS+S+ P + + KRT++F + S+D
Sbjct: 21 SSYPF-----LS-TQLKPISLSSSL---PTLLSLNKRTTQFPTFVSVLSEDDNTLVLDDQ 80
Query: 65 EAVSSSPSDIEEFSRT----------RLLAQNVPWDSTPEDIRSLFEKYGTVLDVELSMY 124
E PS + E T +L N+P+D E + LF++ G V+++ +Y
Sbjct: 81 EQGGDFPSFVGEAGETEEYQEPSEDAKLFVGNLPYDIDSEGLAQLFQQAG-VVEIAEVIY 140
Query: 125 NK--IRNRGLAFVTMGSPEEALAALNNLESYEFEGRTLRLNYAKLKKEKPSPPVKPKPVT 184
N+ R+RG FVTM + EEA A+ Y+ GR L +N A + +P + T
Sbjct: 141 NRETDRSRGFGFVTMSTVEEADKAVELYSQYDLNGRLLTVNKAAPRGSRPERAPRTFQPT 200
Query: 185 FNLFVANLPFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKAKKDAEAAI 244
+ ++V N+P++ L + F S G VVSA+++F RS G+GFV ++ + AI
Sbjct: 201 YRIYVGNIPWDIDDARLEQVF-SEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAI 260
BLAST of IVF0005726 vs. ExPASy Swiss-Prot
Match:
P19683 (31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=1)
HSP 1 Score: 95.9 bits (237), Expect = 7.5e-19
Identity = 61/200 (30.50%), Postives = 104/200 (52.00%), Query Frame = 0
Query: 45 FVFQFASTSQDEAVSSSPSDIEEFSR----TRLLAQNVPWDSTPEDIRSLFEKYGTVLDV 104
FV + + V + + EEF +L N+P+D E + LFE+ G V+++
Sbjct: 107 FVEAVGDAGESDEVEADEEE-EEFQEPPEDAKLFVGNLPYDVDSEGLARLFEQAG-VVEI 166
Query: 105 ELSMYNK--IRNRGLAFVTMGSPEEALAALNNLESYEFEGRTLRLNYAKLKKEKPSPPVK 164
+YN+ ++RG FVTM + EEA A+ Y+ GR L +N A + E+P P +
Sbjct: 167 AEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEMYNRYDVNGRLLTVNKAARRGERPERPPR 226
Query: 165 PKPVTFNLFVANLPFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKAKKD 224
++ ++V N+P+ L + F S G VVSA++++ RS G+GFV ++ +
Sbjct: 227 TFEQSYRIYVGNIPWGIDDARLEQLF-SEHGKVVSARVVYDRETGRSRGFGFVTMASEAE 286
Query: 225 AEAAISEFQGKTFMGRSLRV 239
AI+ G++ GR++RV
Sbjct: 287 MSDAIANLDGQSLDGRTIRV 303
BLAST of IVF0005726 vs. ExPASy Swiss-Prot
Match:
P28644 (28 kDa ribonucleoprotein, chloroplastic OS=Spinacia oleracea OX=3562 PE=1 SV=1)
HSP 1 Score: 91.3 bits (225), Expect = 1.8e-17
Identity = 58/188 (30.85%), Postives = 94/188 (50.00%), Query Frame = 0
Query: 53 SQDEAVSSSPSDIEEFSRTRLLAQNVPWDSTPEDIRSLFEKYGTVLDVELSMYNK--IRN 112
S + V E +L N+P+D E + +F+ G V+++ +YN+ R+
Sbjct: 37 SDEGGVEGGQGFSEPPEEAKLFVGNLPYDVDSEKLAGIFDAAG-VVEIAEVIYNRETDRS 96
Query: 113 RGLAFVTMGSPEEALAALNNLESYEFEGRTLRLNYAKLKKEKPSPPVKPKPVTFNLFVAN 172
RG FVTM + EEA A+ L Y+ +GR L +N A + P + ++V N
Sbjct: 97 RGFGFVTMSTVEEAEKAVELLNGYDMDGRQLTVNKAAPRGSPERAPRGDFEPSCRVYVGN 156
Query: 173 LPFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKAKKDAEAAISEFQGKT 232
LP++ L + F S G VVSA+++ RS G+GFV ++ + AI+ G+T
Sbjct: 157 LPWDVDTSRLEQLF-SEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAALDGQT 216
Query: 233 FMGRSLRV 239
GR++RV
Sbjct: 217 LDGRAVRV 222
BLAST of IVF0005726 vs. ExPASy Swiss-Prot
Match:
P19684 (33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=1)
HSP 1 Score: 86.3 bits (212), Expect = 5.9e-16
Identity = 77/280 (27.50%), Postives = 135/280 (48.21%), Query Frame = 0
Query: 2 FAKSSYPINGDFNLSVSRSSPSLLSTSICHNPLISIMAKRTSKFVFQFASTSQDEAVSSS 61
F +S + F +S S LST + + ++ + + V A ++
Sbjct: 45 FKINSTKLKAHFPISSLYRSSIFLSTCASVSDGVEVVQEDDEEEVALSAEEEEEIEEKEE 104
Query: 62 PSDIEEFSRTRLLAQNVPWDSTPEDIRSLFEKYGTVLDVELSMYNKI--RNRGLAFVTMG 121
+ E RL N+P+ T + +F + GTV +VE+ +Y+++ R+RG AFVTMG
Sbjct: 105 RVESESVEGGRLYVGNLPFSMTSSQLSEIFAEAGTVANVEI-VYDRVTDRSRGFAFVTMG 164
Query: 122 SPEEALAALNNLESYEFEGRTLRLNYAKL----KKEKPSPPVKPKPVTF-----NLFVAN 181
S EEA A+ + + GRT+++N+ ++ ++E S ++ F L+VAN
Sbjct: 165 SVEEAKEAIRLFDGSQVGGRTVKVNFPEVPRGGEREVMSAKIRSTYQGFVDSPHKLYVAN 224
Query: 182 LPFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKAKKDAEAAISEFQGKT 241
L + ++ LR+ F G +SA++I+ + RS G+GF+ F + + +A+
Sbjct: 225 LSWALTSQGLRDAFADQPG-FMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDTMNEVE 284
Query: 242 FMGRSLR--VARSKQFVKLPSEEKSQSEDASTDGVELANA 269
GR LR VA K V P ++ E+ S D EL ++
Sbjct: 285 LEGRPLRLNVAGQKAPVSSPPVVETSPENDS-DNSELLSS 321
BLAST of IVF0005726 vs. ExPASy TrEMBL
Match:
A0A5A7TBD1 (31 kDa ribonucleoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G005930 PE=4 SV=1)
HSP 1 Score: 514.2 bits (1323), Expect = 3.3e-142
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 0
Query: 6 SYPINGDFNLSVSRSSPSLLSTSICHNPLISIMAKRTSKFVFQFASTSQDEAVSSSPSDI 65
SYPINGDFNLSVSRSSPSLLSTSICHNPLISIMAKRTSKFVFQFASTSQDEAVSSSPSDI
Sbjct: 35 SYPINGDFNLSVSRSSPSLLSTSICHNPLISIMAKRTSKFVFQFASTSQDEAVSSSPSDI 94
Query: 66 EEFSRTRLLAQNVPWDSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEAL 125
EEFSRTRLLAQNVPWDSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEAL
Sbjct: 95 EEFSRTRLLAQNVPWDSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEAL 154
Query: 126 AALNNLESYEFEGRTLRLNYAKLKKEKPSPPVKPKPVTFNLFVANLPFEARAKDLREFFD 185
AALNNLESYEFEGRTLRLNYAKLKKEKPSPPVKPKPVTFNLFVANLPFEARAKDLREFFD
Sbjct: 155 AALNNLESYEFEGRTLRLNYAKLKKEKPSPPVKPKPVTFNLFVANLPFEARAKDLREFFD 214
Query: 186 SGSGNVVSAQIIFHENPRRSSGYGFVAFKAKKDAEAAISEFQGKTFMGRSLRVARSKQFV 245
SGSGNVVSAQIIFHENPRRSSGYGFVAFKAKKDAEAAISEFQGKTFMGRSLRVARSKQFV
Sbjct: 215 SGSGNVVSAQIIFHENPRRSSGYGFVAFKAKKDAEAAISEFQGKTFMGRSLRVARSKQFV 274
Query: 246 KLPSEEKSQSEDASTDGVELANAAAEV 273
KLPSEEKSQSEDASTDGVELANAAAEV
Sbjct: 275 KLPSEEKSQSEDASTDGVELANAAAEV 301
BLAST of IVF0005726 vs. ExPASy TrEMBL
Match:
A0A1S3CS17 (31 kDa ribonucleoprotein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103503681 PE=4 SV=1)
HSP 1 Score: 514.2 bits (1323), Expect = 3.3e-142
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 0
Query: 6 SYPINGDFNLSVSRSSPSLLSTSICHNPLISIMAKRTSKFVFQFASTSQDEAVSSSPSDI 65
SYPINGDFNLSVSRSSPSLLSTSICHNPLISIMAKRTSKFVFQFASTSQDEAVSSSPSDI
Sbjct: 35 SYPINGDFNLSVSRSSPSLLSTSICHNPLISIMAKRTSKFVFQFASTSQDEAVSSSPSDI 94
Query: 66 EEFSRTRLLAQNVPWDSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEAL 125
EEFSRTRLLAQNVPWDSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEAL
Sbjct: 95 EEFSRTRLLAQNVPWDSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEAL 154
Query: 126 AALNNLESYEFEGRTLRLNYAKLKKEKPSPPVKPKPVTFNLFVANLPFEARAKDLREFFD 185
AALNNLESYEFEGRTLRLNYAKLKKEKPSPPVKPKPVTFNLFVANLPFEARAKDLREFFD
Sbjct: 155 AALNNLESYEFEGRTLRLNYAKLKKEKPSPPVKPKPVTFNLFVANLPFEARAKDLREFFD 214
Query: 186 SGSGNVVSAQIIFHENPRRSSGYGFVAFKAKKDAEAAISEFQGKTFMGRSLRVARSKQFV 245
SGSGNVVSAQIIFHENPRRSSGYGFVAFKAKKDAEAAISEFQGKTFMGRSLRVARSKQFV
Sbjct: 215 SGSGNVVSAQIIFHENPRRSSGYGFVAFKAKKDAEAAISEFQGKTFMGRSLRVARSKQFV 274
Query: 246 KLPSEEKSQSEDASTDGVELANAAAEV 273
KLPSEEKSQSEDASTDGVELANAAAEV
Sbjct: 275 KLPSEEKSQSEDASTDGVELANAAAEV 301
BLAST of IVF0005726 vs. ExPASy TrEMBL
Match:
A0A0A0LEN0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G889940 PE=4 SV=1)
HSP 1 Score: 485.3 bits (1248), Expect = 1.6e-133
Identity = 254/267 (95.13%), Postives = 260/267 (97.38%), Query Frame = 0
Query: 6 SYPINGDFNLSVSRSSPSLLSTSICHNPLISIMAKRTSKFVFQFASTSQDEAVSSSPSDI 65
SYPINGDFNLS+SRSSPSLLSTSI H+PLISI AKRTS FVFQFASTSQDEAV SSPSD
Sbjct: 35 SYPINGDFNLSISRSSPSLLSTSISHSPLISIRAKRTSTFVFQFASTSQDEAV-SSPSDT 94
Query: 66 EEFSRTRLLAQNVPWDSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEAL 125
EEFS+TRLLAQNVPWDSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEAL
Sbjct: 95 EEFSQTRLLAQNVPWDSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEAL 154
Query: 126 AALNNLESYEFEGRTLRLNYAKLKKEKPSPPVKPKPVTFNLFVANLPFEARAKDLREFFD 185
AALNNLESYEFEGRTLRLNYAKLKKEKPSPPVKPKPVTFNLFVANLPF+ARAKDL+EFFD
Sbjct: 155 AALNNLESYEFEGRTLRLNYAKLKKEKPSPPVKPKPVTFNLFVANLPFDARAKDLKEFFD 214
Query: 186 SGSGNVVSAQIIFHENPRRSSGYGFVAFKAKKDAEAAISEFQGKTFMGRSLRVARSKQFV 245
SGSGNVVSAQIIF+ENPRRSSGYGFVAFK KKDAEAAISEFQGKTFMGRSLRVARSKQFV
Sbjct: 215 SGSGNVVSAQIIFNENPRRSSGYGFVAFKTKKDAEAAISEFQGKTFMGRSLRVARSKQFV 274
Query: 246 KLPSEEKSQSEDASTDGVELANAAAEV 273
KLPSEEK QSEDASTDGVELANAAAEV
Sbjct: 275 KLPSEEKPQSEDASTDGVELANAAAEV 300
BLAST of IVF0005726 vs. ExPASy TrEMBL
Match:
A0A6J1FF97 (28 kDa ribonucleoprotein, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111443545 PE=4 SV=1)
HSP 1 Score: 455.7 bits (1171), Expect = 1.4e-124
Identity = 237/267 (88.76%), Postives = 247/267 (92.51%), Query Frame = 0
Query: 6 SYPINGDFNLSVSRSSPSLLSTSICHNPLISIMAKRTSKFVFQFASTSQDEAVSSSPSDI 65
SY NGD LS+SRSS SL ST + HNPL SI AKRT KFVFQ ASTSQD+AV+SS SD
Sbjct: 35 SYSNNGDIKLSLSRSSSSLFSTPLGHNPLASIRAKRTRKFVFQLASTSQDDAVASSSSDA 94
Query: 66 EEFSRTRLLAQNVPWDSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEAL 125
EEFSR RLLAQNVPWDSTPEDIRSLFEKYGTV+DVELSMYNKIRNRGLAFVTMGSPEEAL
Sbjct: 95 EEFSRNRLLAQNVPWDSTPEDIRSLFEKYGTVVDVELSMYNKIRNRGLAFVTMGSPEEAL 154
Query: 126 AALNNLESYEFEGRTLRLNYAKLKKEKPSPPVKPKPVTFNLFVANLPFEARAKDLREFFD 185
AA+NNLESYEF GRTL+LNYAK+KKEKPSPPVKP PVTFNLFVANLPF+ARAKDLREFFD
Sbjct: 155 AAVNNLESYEFGGRTLKLNYAKVKKEKPSPPVKPNPVTFNLFVANLPFDARAKDLREFFD 214
Query: 186 SGSGNVVSAQIIFHENPRRSSGYGFVAFKAKKDAEAAISEFQGKTFMGRSLRVARSKQFV 245
SGSGNVVSAQIIFHENPRRSSGYGFVAFK KKDAEAAISEFQGK FMGRSLRVARSKQFV
Sbjct: 215 SGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKNFMGRSLRVARSKQFV 274
Query: 246 KLPSEEKSQSEDASTDGVELANAAAEV 273
KLPSEEKSQSED STDGVELA+AAAEV
Sbjct: 275 KLPSEEKSQSEDTSTDGVELASAAAEV 301
BLAST of IVF0005726 vs. ExPASy TrEMBL
Match:
A0A6J1IE80 (28 kDa ribonucleoprotein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111476441 PE=4 SV=1)
HSP 1 Score: 454.1 bits (1167), Expect = 4.0e-124
Identity = 235/267 (88.01%), Postives = 247/267 (92.51%), Query Frame = 0
Query: 6 SYPINGDFNLSVSRSSPSLLSTSICHNPLISIMAKRTSKFVFQFASTSQDEAVSSSPSDI 65
SY NGD LS+SRSS SL ST + HNPL SI AKRT KFVFQ ASTSQD+A++SS SD
Sbjct: 35 SYSNNGDIKLSLSRSSSSLFSTPLGHNPLTSIRAKRTRKFVFQLASTSQDDAIASSSSDA 94
Query: 66 EEFSRTRLLAQNVPWDSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEAL 125
EEFSRTRLLAQNVPWDSTPEDIRSLFEKYGTV+DVELSMYNKIRNRGLAFVTMGSPEEAL
Sbjct: 95 EEFSRTRLLAQNVPWDSTPEDIRSLFEKYGTVVDVELSMYNKIRNRGLAFVTMGSPEEAL 154
Query: 126 AALNNLESYEFEGRTLRLNYAKLKKEKPSPPVKPKPVTFNLFVANLPFEARAKDLREFFD 185
AA+NNLESYEF GRTL+LNYAK+KKEKPSPPVKP PVTFNLFVANLPF+ARAKDLREFFD
Sbjct: 155 AAVNNLESYEFGGRTLKLNYAKVKKEKPSPPVKPNPVTFNLFVANLPFDARAKDLREFFD 214
Query: 186 SGSGNVVSAQIIFHENPRRSSGYGFVAFKAKKDAEAAISEFQGKTFMGRSLRVARSKQFV 245
SGSGNVVSAQIIFHENPRRSSGYGFVAFK KKDAEAAISEFQGK FMGRSLRVARSKQFV
Sbjct: 215 SGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKNFMGRSLRVARSKQFV 274
Query: 246 KLPSEEKSQSEDASTDGVELANAAAEV 273
KLPSEE SQS+D STDGVELA+AAAEV
Sbjct: 275 KLPSEENSQSDDTSTDGVELASAAAEV 301
BLAST of IVF0005726 vs. NCBI nr
Match:
XP_008466190.1 (PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Cucumis melo] >KAA0038685.1 31 kDa ribonucleoprotein [Cucumis melo var. makuwa] >TYK31295.1 31 kDa ribonucleoprotein [Cucumis melo var. makuwa])
HSP 1 Score: 507 bits (1306), Expect = 3.91e-180
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 0
Query: 6 SYPINGDFNLSVSRSSPSLLSTSICHNPLISIMAKRTSKFVFQFASTSQDEAVSSSPSDI 65
SYPINGDFNLSVSRSSPSLLSTSICHNPLISIMAKRTSKFVFQFASTSQDEAVSSSPSDI
Sbjct: 35 SYPINGDFNLSVSRSSPSLLSTSICHNPLISIMAKRTSKFVFQFASTSQDEAVSSSPSDI 94
Query: 66 EEFSRTRLLAQNVPWDSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEAL 125
EEFSRTRLLAQNVPWDSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEAL
Sbjct: 95 EEFSRTRLLAQNVPWDSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEAL 154
Query: 126 AALNNLESYEFEGRTLRLNYAKLKKEKPSPPVKPKPVTFNLFVANLPFEARAKDLREFFD 185
AALNNLESYEFEGRTLRLNYAKLKKEKPSPPVKPKPVTFNLFVANLPFEARAKDLREFFD
Sbjct: 155 AALNNLESYEFEGRTLRLNYAKLKKEKPSPPVKPKPVTFNLFVANLPFEARAKDLREFFD 214
Query: 186 SGSGNVVSAQIIFHENPRRSSGYGFVAFKAKKDAEAAISEFQGKTFMGRSLRVARSKQFV 245
SGSGNVVSAQIIFHENPRRSSGYGFVAFKAKKDAEAAISEFQGKTFMGRSLRVARSKQFV
Sbjct: 215 SGSGNVVSAQIIFHENPRRSSGYGFVAFKAKKDAEAAISEFQGKTFMGRSLRVARSKQFV 274
Query: 246 KLPSEEKSQSEDASTDGVELANAAAEV 272
KLPSEEKSQSEDASTDGVELANAAAEV
Sbjct: 275 KLPSEEKSQSEDASTDGVELANAAAEV 301
BLAST of IVF0005726 vs. NCBI nr
Match:
XP_038897887.1 (31 kDa ribonucleoprotein, chloroplastic [Benincasa hispida])
HSP 1 Score: 484 bits (1247), Expect = 3.82e-171
Identity = 256/267 (95.88%), Postives = 259/267 (97.00%), Query Frame = 0
Query: 6 SYPINGDFNLSVSRSSPSLLSTSICHNPLISIMAKRTSKFVFQFASTSQDEAVSSSPSDI 65
SYPINGDFNLS+SRSSPSLLSTSI HNPLISI KRTSKFVFQFASTSQDEAV+SSPSD
Sbjct: 35 SYPINGDFNLSISRSSPSLLSTSIGHNPLISIRGKRTSKFVFQFASTSQDEAVASSPSDS 94
Query: 66 EEFSRTRLLAQNVPWDSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEAL 125
EEFS+TRLLAQNVPW STPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEAL
Sbjct: 95 EEFSQTRLLAQNVPWSSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEAL 154
Query: 126 AALNNLESYEFEGRTLRLNYAKLKKEKPSPPVKPKPVTFNLFVANLPFEARAKDLREFFD 185
AALNNLESYEFEGRTLRLNYAKLKKEKPSPPVKPKPVTFNLFVANLPFEARAKDLREFFD
Sbjct: 155 AALNNLESYEFEGRTLRLNYAKLKKEKPSPPVKPKPVTFNLFVANLPFEARAKDLREFFD 214
Query: 186 SGSGNVVSAQIIFHENPRRSSGYGFVAFKAKKDAEAAISEFQGKTFMGRSLRVARSKQFV 245
SGSGNVVSAQIIFHENPRRSSGYGFVAFK KKDAEAAISEFQGK FMGRSLRVARSKQFV
Sbjct: 215 SGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRSLRVARSKQFV 274
Query: 246 KLPSEEKSQSEDASTDGVELANAAAEV 272
KLPSEEKSQSEDASTD VELANAAAEV
Sbjct: 275 KLPSEEKSQSEDASTDDVELANAAAEV 301
BLAST of IVF0005726 vs. NCBI nr
Match:
XP_004136268.1 (28 kDa ribonucleoprotein, chloroplastic [Cucumis sativus] >KGN60238.1 hypothetical protein Csa_002107 [Cucumis sativus])
HSP 1 Score: 479 bits (1232), Expect = 7.10e-169
Identity = 254/267 (95.13%), Postives = 260/267 (97.38%), Query Frame = 0
Query: 6 SYPINGDFNLSVSRSSPSLLSTSICHNPLISIMAKRTSKFVFQFASTSQDEAVSSSPSDI 65
SYPINGDFNLS+SRSSPSLLSTSI H+PLISI AKRTS FVFQFASTSQDEAV SSPSD
Sbjct: 35 SYPINGDFNLSISRSSPSLLSTSISHSPLISIRAKRTSTFVFQFASTSQDEAV-SSPSDT 94
Query: 66 EEFSRTRLLAQNVPWDSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEAL 125
EEFS+TRLLAQNVPWDSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEAL
Sbjct: 95 EEFSQTRLLAQNVPWDSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEAL 154
Query: 126 AALNNLESYEFEGRTLRLNYAKLKKEKPSPPVKPKPVTFNLFVANLPFEARAKDLREFFD 185
AALNNLESYEFEGRTLRLNYAKLKKEKPSPPVKPKPVTFNLFVANLPF+ARAKDL+EFFD
Sbjct: 155 AALNNLESYEFEGRTLRLNYAKLKKEKPSPPVKPKPVTFNLFVANLPFDARAKDLKEFFD 214
Query: 186 SGSGNVVSAQIIFHENPRRSSGYGFVAFKAKKDAEAAISEFQGKTFMGRSLRVARSKQFV 245
SGSGNVVSAQIIF+ENPRRSSGYGFVAFK KKDAEAAISEFQGKTFMGRSLRVARSKQFV
Sbjct: 215 SGSGNVVSAQIIFNENPRRSSGYGFVAFKTKKDAEAAISEFQGKTFMGRSLRVARSKQFV 274
Query: 246 KLPSEEKSQSEDASTDGVELANAAAEV 272
KLPSEEK QSEDASTDGVELANAAAEV
Sbjct: 275 KLPSEEKPQSEDASTDGVELANAAAEV 300
BLAST of IVF0005726 vs. NCBI nr
Match:
XP_022937168.1 (28 kDa ribonucleoprotein, chloroplastic-like [Cucurbita moschata] >KAG6591682.1 RNA-binding protein CP33, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 449 bits (1154), Expect = 5.57e-157
Identity = 237/267 (88.76%), Postives = 247/267 (92.51%), Query Frame = 0
Query: 6 SYPINGDFNLSVSRSSPSLLSTSICHNPLISIMAKRTSKFVFQFASTSQDEAVSSSPSDI 65
SY NGD LS+SRSS SL ST + HNPL SI AKRT KFVFQ ASTSQD+AV+SS SD
Sbjct: 35 SYSNNGDIKLSLSRSSSSLFSTPLGHNPLASIRAKRTRKFVFQLASTSQDDAVASSSSDA 94
Query: 66 EEFSRTRLLAQNVPWDSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEAL 125
EEFSR RLLAQNVPWDSTPEDIRSLFEKYGTV+DVELSMYNKIRNRGLAFVTMGSPEEAL
Sbjct: 95 EEFSRNRLLAQNVPWDSTPEDIRSLFEKYGTVVDVELSMYNKIRNRGLAFVTMGSPEEAL 154
Query: 126 AALNNLESYEFEGRTLRLNYAKLKKEKPSPPVKPKPVTFNLFVANLPFEARAKDLREFFD 185
AA+NNLESYEF GRTL+LNYAK+KKEKPSPPVKP PVTFNLFVANLPF+ARAKDLREFFD
Sbjct: 155 AAVNNLESYEFGGRTLKLNYAKVKKEKPSPPVKPNPVTFNLFVANLPFDARAKDLREFFD 214
Query: 186 SGSGNVVSAQIIFHENPRRSSGYGFVAFKAKKDAEAAISEFQGKTFMGRSLRVARSKQFV 245
SGSGNVVSAQIIFHENPRRSSGYGFVAFK KKDAEAAISEFQGK FMGRSLRVARSKQFV
Sbjct: 215 SGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKNFMGRSLRVARSKQFV 274
Query: 246 KLPSEEKSQSEDASTDGVELANAAAEV 272
KLPSEEKSQSED STDGVELA+AAAEV
Sbjct: 275 KLPSEEKSQSEDTSTDGVELASAAAEV 301
BLAST of IVF0005726 vs. NCBI nr
Match:
KAG7024563.1 (RNA-binding protein CP33, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 449 bits (1154), Expect = 5.57e-157
Identity = 237/267 (88.76%), Postives = 247/267 (92.51%), Query Frame = 0
Query: 6 SYPINGDFNLSVSRSSPSLLSTSICHNPLISIMAKRTSKFVFQFASTSQDEAVSSSPSDI 65
SY NGD LS+SRSS SL ST + HNPL SI AKRT KFVFQ ASTSQD+AV+SS SD
Sbjct: 35 SYSNNGDIKLSLSRSSSSLFSTPLGHNPLASIRAKRTRKFVFQLASTSQDDAVASSSSDA 94
Query: 66 EEFSRTRLLAQNVPWDSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEAL 125
EEFSR RLLAQNVPWDSTPEDIRSLFEKYGTV+DVELSMYNKIRNRGLAFVTMGSPEEAL
Sbjct: 95 EEFSRNRLLAQNVPWDSTPEDIRSLFEKYGTVVDVELSMYNKIRNRGLAFVTMGSPEEAL 154
Query: 126 AALNNLESYEFEGRTLRLNYAKLKKEKPSPPVKPKPVTFNLFVANLPFEARAKDLREFFD 185
AA+NNLESYEF GRTL+LNYAK+KKEKPSPPVKP PVTFNLFVANLPF+ARAKDLREFFD
Sbjct: 155 AAVNNLESYEFGGRTLKLNYAKVKKEKPSPPVKPNPVTFNLFVANLPFDARAKDLREFFD 214
Query: 186 SGSGNVVSAQIIFHENPRRSSGYGFVAFKAKKDAEAAISEFQGKTFMGRSLRVARSKQFV 245
SGSGNVVSAQIIFHENPRRSSGYGFVAFK KKDAEAAISEFQGK FMGRSLRVARSKQFV
Sbjct: 215 SGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKNFMGRSLRVARSKQFV 274
Query: 246 KLPSEEKSQSEDASTDGVELANAAAEV 272
KLPSEEKSQSED STDGVELA+AAAEV
Sbjct: 275 KLPSEEKSQSEDTSTDGVELASAAAEV 301
BLAST of IVF0005726 vs. TAIR 10
Match:
AT4G09040.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 267.3 bits (682), Expect = 1.3e-71
Identity = 147/272 (54.04%), Postives = 193/272 (70.96%), Query Frame = 0
Query: 10 NGDFNLSVSRSSPSLLSTSIC----HNPLISIMAKRTSKFVFQFASTSQDEAVSSSPSDI 69
N + N++ + S SL + S+C H + ++ F++T+Q+ + SS S
Sbjct: 22 NPNPNVAFTNHSLSLSTPSLCRLHRHATFPDSIPAKSRNLTSYFSTTTQEPVLESSSSSS 81
Query: 70 -------EEFSRTRLLAQNVPWDSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTM 129
EE S+TRL+AQNVPW STPEDIRSLFEKYG+V+D+E+SM+ K RNRGL F+ M
Sbjct: 82 SAPEVVEEEISKTRLIAQNVPWTSTPEDIRSLFEKYGSVIDIEMSMHKKERNRGLVFIEM 141
Query: 130 GSPEEALAALNNLESYEFEGRTLRLNYAKLKKEKP-SPPVKPKPV-TFNLFVANLPFEAR 189
SPEEA AL +LES E+EGR L+++YAK KK+K +P P PV TFNLFVANL FEAR
Sbjct: 142 ASPEEAATALKSLESCEYEGRRLKVDYAKTKKKKTYAPRETPSPVPTFNLFVANLAFEAR 201
Query: 190 AKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKAKKDAEAAISEFQGKTFMGRSL 249
AK L+EFFD+ +GNVVS ++IFHENPRRSSGYGFV+FK KK AEAA+ EFQGK F+GR +
Sbjct: 202 AKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKQAEAALIEFQGKDFLGRPI 261
Query: 250 RVARSKQFVKL-------PSEEKSQSEDASTD 262
R+A+SKQFVKL P EE+++ E + ++
Sbjct: 262 RLAKSKQFVKLQAKEGLQPPEEEAEEEPSQSE 293
BLAST of IVF0005726 vs. TAIR 10
Match:
AT4G09040.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 257.7 bits (657), Expect = 1.1e-68
Identity = 131/202 (64.85%), Postives = 163/202 (80.69%), Query Frame = 0
Query: 69 SRTRLLAQNVPWDSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAAL 128
S+TRL+AQNVPW STPEDIRSLFEKYG+V+D+E+SM+ K RNRGL F+ M SPEEA AL
Sbjct: 32 SKTRLIAQNVPWTSTPEDIRSLFEKYGSVIDIEMSMHKKERNRGLVFIEMASPEEAATAL 91
Query: 129 NNLESYEFEGRTLRLNYAKLKKEKP-SPPVKPKPV-TFNLFVANLPFEARAKDLREFFDS 188
+LES E+EGR L+++YAK KK+K +P P PV TFNLFVANL FEARAK L+EFFD+
Sbjct: 92 KSLESCEYEGRRLKVDYAKTKKKKTYAPRETPSPVPTFNLFVANLAFEARAKHLKEFFDA 151
Query: 189 GSGNVVSAQIIFHENPRRSSGYGFVAFKAKKDAEAAISEFQGKTFMGRSLRVARSKQFVK 248
+GNVVS ++IFHENPRRSSGYGFV+FK KK AEAA+ EFQGK F+GR +R+A+SKQFVK
Sbjct: 152 DTGNVVSTEVIFHENPRRSSGYGFVSFKTKKQAEAALIEFQGKDFLGRPIRLAKSKQFVK 211
Query: 249 L-------PSEEKSQSEDASTD 262
L P EE+++ E + ++
Sbjct: 212 LQAKEGLQPPEEEAEEEPSQSE 233
BLAST of IVF0005726 vs. TAIR 10
Match:
AT2G35410.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 131.3 bits (329), Expect = 1.1e-30
Identity = 89/255 (34.90%), Postives = 135/255 (52.94%), Query Frame = 0
Query: 23 SLLSTSICHNPLISIMAKRTSKFVFQFASTSQDEAVSSSPSDIEEFSRTRLLAQNVPWDS 82
SL S S L+S++ K TSQ+E + + + +L N+PW
Sbjct: 50 SLRSGSDNSRRLVSVLCSVAEKETSADEETSQEEKTEETQN---SNLKRKLFVFNLPWSM 109
Query: 83 TPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESYEFEGRTLR 142
+ DI LF + GTV +VE+ +NRG AFVTM S EEA AA++ ++++ GR +
Sbjct: 110 SVNDISELFGQCGTVNNVEIIRQKDGKNRGFAFVTMASGEEAQAAIDKFDTFQVSGRIIS 169
Query: 143 LNYA-KLKKEKPS-----PPVKPKPVTFNLFVANLPFEARAKDLREFFDSGSGNVVSAQI 202
+++A + KK P P P L+V+NL ++AR+ LRE F + N VSA++
Sbjct: 170 VSFARRFKKPTPKSPNDLPSPAPGDTRHKLYVSNLAWKARSTHLRELFTAADFNPVSARV 229
Query: 203 IFHENPRRSSGYGFVAFKAKKDAEAAISEFQGKTFMGRSLRVARSKQFVKLPSEEKSQSE 262
+F + RSSGYGFV+F +++AE AI++ GK MGR + +K S+SE
Sbjct: 230 VFADPEGRSSGYGFVSFATREEAENAITKLNGKEIMGRPIT-------LKFSLRSASESE 289
Query: 263 DASTDGVELANAAAE 272
D D VE NA+ +
Sbjct: 290 DG--DSVEANNASED 292
BLAST of IVF0005726 vs. TAIR 10
Match:
AT3G52380.1 (chloroplast RNA-binding protein 33 )
HSP 1 Score: 102.4 bits (254), Expect = 5.7e-22
Identity = 82/281 (29.18%), Postives = 145/281 (51.60%), Query Frame = 0
Query: 30 CHNPLISIMAKRTSKFVFQF---ASTSQDEAVSS-------------SPSDIEEFSRT-- 89
C NPLI R +F AS++ DE +S ++EE +T
Sbjct: 51 CPNPLILHSNIRRHRFFCAAETEASSADDEIQASVEEEEEVEEEGDEGEEEVEEEKQTTQ 110
Query: 90 ------RLLAQNVPWDSTPEDIRSLFEKYGTVLDVELSMYNKI--RNRGLAFVTMGSPEE 149
RL N+P+ T ++ +F + GTV+DV++ +Y+K+ R+RG FVTMGS EE
Sbjct: 111 ASGEEGRLYVGNLPYTITSSELSQIFGEAGTVVDVQI-VYDKVTDRSRGFGFVTMGSIEE 170
Query: 150 ALAALNNLESYEFEGRTLRLNYAKLKKEKPSPPVKPKPVTFN---------LFVANLPFE 209
A A+ S + GRT+++N+ ++ + + ++ K N ++ NL +
Sbjct: 171 AKEAMQMFNSSQIGGRTVKVNFPEVPRGGENEVMRTKIRDNNRSYVDSPHKVYAGNLGWN 230
Query: 210 ARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKAKKDAEAAISEFQGKTFMGR 269
++ L++ F G V+ A++I+ N RS G+GF++F++ ++ ++A++ G GR
Sbjct: 231 LTSQGLKDAFGDQPG-VLGAKVIYERNTGRSRGFGFISFESAENVQSALATMNGVEVEGR 290
Query: 270 SLRV----ARSKQFVKLPSEEKSQSEDASTDGVE-LANAAA 271
+LR+ R K V PS E+ ++E+AS + E L+N +A
Sbjct: 291 ALRLNLASEREKPTVSPPSVEEGETEEASLESNEVLSNVSA 329
BLAST of IVF0005726 vs. TAIR 10
Match:
AT1G60000.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 87.0 bits (214), Expect = 2.5e-17
Identity = 69/238 (28.99%), Postives = 117/238 (49.16%), Query Frame = 0
Query: 13 FNLSVSRSSPSLLSTSICHNPLISIMAKRTSKFVFQFASTSQDEAVSSSPSDIEEFSRTR 72
FN S + P L+S+ C + T K + + +S+ D T+
Sbjct: 34 FNFSTPK--PLLISSRSCSRRFRVLSETITVKL-----EEEEKDDGASAVLDPPAAVNTK 93
Query: 73 LLAQNVPWDSTPEDIRSLFEKYGTVLDVELSMYNKI--RNRGLAFVTMGSPEEALAALNN 132
L N+P++ + + + + VE+ +YN+ ++RG AFVTM + E+ ++N
Sbjct: 94 LYFGNLPYNVDSATLAQIIQDFANPELVEV-LYNRDTGQSRGFAFVTMSNVEDCNIIIDN 153
Query: 133 LESYEFEGRTLRLNYAKLKKEKPSPPVKP--KPVTFNLFVANLPFEARAKDLREFFDSGS 192
L+ E+ GR L++N+A +KP P +P LFV NL + ++ L F
Sbjct: 154 LDGTEYLGRALKVNFA----DKPKPNKEPLYPETEHKLFVGNLSWTVTSESLAGAFRE-C 213
Query: 193 GNVVSAQIIFHENPRRSSGYGFVAFKAKKDAEAAISEFQGKTFMGRSLRV--ARSKQF 245
G+VV A+++F + RS GYGFV + +K + E A+ G GR++RV A+ K+F
Sbjct: 214 GDVVGARVVFDGDTGRSRGYGFVCYSSKAEMETALESLDGFELEGRAIRVNLAQGKKF 258
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q39061 | 8.0e-21 | 29.18 | RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP33 ... | [more] |
P19682 | 2.6e-19 | 30.00 | 28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=... | [more] |
P19683 | 7.5e-19 | 30.50 | 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=... | [more] |
P28644 | 1.8e-17 | 30.85 | 28 kDa ribonucleoprotein, chloroplastic OS=Spinacia oleracea OX=3562 PE=1 SV=1 | [more] |
P19684 | 5.9e-16 | 27.50 | 33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7TBD1 | 3.3e-142 | 100.00 | 31 kDa ribonucleoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... | [more] |
A0A1S3CS17 | 3.3e-142 | 100.00 | 31 kDa ribonucleoprotein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103503681 ... | [more] |
A0A0A0LEN0 | 1.6e-133 | 95.13 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G889940 PE=4 SV=1 | [more] |
A0A6J1FF97 | 1.4e-124 | 88.76 | 28 kDa ribonucleoprotein, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LO... | [more] |
A0A6J1IE80 | 4.0e-124 | 88.01 | 28 kDa ribonucleoprotein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111476... | [more] |
Match Name | E-value | Identity | Description | |
XP_008466190.1 | 3.91e-180 | 100.00 | PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Cucumis melo] >KAA0038685.1 ... | [more] |
XP_038897887.1 | 3.82e-171 | 95.88 | 31 kDa ribonucleoprotein, chloroplastic [Benincasa hispida] | [more] |
XP_004136268.1 | 7.10e-169 | 95.13 | 28 kDa ribonucleoprotein, chloroplastic [Cucumis sativus] >KGN60238.1 hypothetic... | [more] |
XP_022937168.1 | 5.57e-157 | 88.76 | 28 kDa ribonucleoprotein, chloroplastic-like [Cucurbita moschata] >KAG6591682.1 ... | [more] |
KAG7024563.1 | 5.57e-157 | 88.76 | RNA-binding protein CP33, chloroplastic [Cucurbita argyrosperma subsp. argyrospe... | [more] |