
IVF0005713 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCTCCCAACCTTTTGAATCAGTAGTTGCATCACACATTCCCAATGGATTCGTTTTTGCATAGTTCACATCTCATACAATTGATACAAAAATAAAAAATAAATCAAAGGAACAAAAAGAAAAGCATATGATTAGATAATTTGATCTAATGTCTAAAGAAAATGGGTCCACCTAATACCCGTTCCCAAAGTATATCATCGACTCGAAACATTGGTGATAAGATACGATTCCAATGGCTGCTTCTTTTTCTCCTACAACACCAATCTCACGCCCAAGCATTAGAACCCTCACTTCCATCTCTTCCTTCAACGTTTCCAACAATTTGAGCACTCGTTCACAACCCCGGAGCATCGTGAAATGCGAATCCAGTGCATCGGCAGCAGACGGCCAGACGCCGCCGGCAAAAAGTCAGAAACTCGAGATCGGCTCCCCCGTTATCGTAATCGAGGCTCCCAAGATGATAAAGACCGCAGCCTCAGTTCCATGTCTCAGGGTCAATTCCGGCATAATCAACCCCGGTGACGTCGGCAGGTGAGTGCCCAATTGTCATTCGTCCTCTGTCTTTGCCATTTCATCGAACACGTTACGTGCATCGTTTTTTTTTTTTTTATAAAAAAAACTAATTACTGTCTGTTCCGTTGCTTTAACGTGTGTGATTGAACAGAATCGTGTCGAGAAAACCTAAGGACGTGTGGGCCGTGCGGCTTAAAGTCGGGACTTACCTCATAGATGGAAGGTATTTTAGAGCATTAGAACTCGATCAATAGCTTTAATTTGTCCGGAGGCTCTCAATTTGAAGGTTCCGAGCTTCCAAATTCACCTTTCATGGCGACTTCGTTGGAATGCGGCGTGTGTTTGAATCCGTTTGTAAAAAATCATTCGGTTATCGTTGCATGTTGTTCAGATCATCCTCCGCGTCTCGATCTTGATACAGCAGATCAAATGCAACTTAATTAACCATGGATTTAGGAGTCTTGTATATTTTATTGCAAATCTGTTATGCATCTTCGTGGAATTTACGATGAAACTCGAACCCCCAATCCCGTTTGATTGTTTCTTTACTGCATGTTTCCATTGTATTTTAAGCATGGATGTATATTTTGGTTTAAGATATATTTCGTGCAGGTTGTGAGTTCGGCTCATTTGACCTGTGCAGGACAGCTAGGTTGGTTCAAATTAGTAAACAATTAAAAATAACCGTCGAGC CCTCCCAACCTTTTGAATCAGTAGTTGCATCACACATTCCCAATGGATTCGTTTTTGCATAGTTCACATCTCATACAATTGATACAAAAATAAAAAATAAATCAAAGGAACAAAAAGAAAAGCATATGATTAGATAATTTGATCTAATGTCTAAAGAAAATGGGTCCACCTAATACCCGTTCCCAAAGTATATCATCGACTCGAAACATTGGTGATAAGATACGATTCCAATGGCTGCTTCTTTTTCTCCTACAACACCAATCTCACGCCCAAGCATTAGAACCCTCACTTCCATCTCTTCCTTCAACGTTTCCAACAATTTGAGCACTCGTTCACAACCCCGGAGCATCGTGAAATGCGAATCCAGTGCATCGGCAGCAGACGGCCAGACGCCGCCGGCAAAAAGTCAGAAACTCGAGATCGGCTCCCCCGTTATCGTAATCGAGGCTCCCAAGATGATAAAGACCGCAGCCTCAGTTCCATGTCTCAGGGTCAATTCCGGCATAATCAACCCCGGTGACGTCGGCAGAATCGTGTCGAGAAAACCTAAGGACGTGTGGGCCGTGCGGCTTAAAGTCGGGACTTACCTCATAGATGGAAGGTATTTTAGAGCATTAGAACTCGATCAATAGCTTTAATTTGTCCGGAGGCTCTCAATTTGAAGGTTCCGAGCTTCCAAATTCACCTTTCATGGCGACTTCGTTGGAATGCGGCGTGTGTTTGAATCCGTTTGTAAAAAATCATTCGGTTATCGTTGCATGTTGTTCAGATCATCCTCCGCGTCTCGATCTTGATACAGCAGATCAAATGCAACTTAATTAACCATGGATTTAGGAGTCTTGTATATTTTATTGCAAATCTGTTATGCATCTTCGTGGAATTTACGATGAAACTCGAACCCCCAATCCCGTTTGATTGTTTCTTTACTGCATGTTTCCATTGTATTTTAAGCATGGATGTATATTTTGGTTTAAGATATATTTCGTGCAGGTTGTGAGTTCGGCTCATTTGACCTGTGCAGGACAGCTAGGTTGGTTCAAATTAGTAAACAATTAAAAATAACCGTCGAGC ATGGCTGCTTCTTTTTCTCCTACAACACCAATCTCACGCCCAAGCATTAGAACCCTCACTTCCATCTCTTCCTTCAACGTTTCCAACAATTTGAGCACTCGTTCACAACCCCGGAGCATCGTGAAATGCGAATCCAGTGCATCGGCAGCAGACGGCCAGACGCCGCCGGCAAAAAGTCAGAAACTCGAGATCGGCTCCCCCGTTATCGTAATCGAGGCTCCCAAGATGATAAAGACCGCAGCCTCAGTTCCATGTCTCAGGGTCAATTCCGGCATAATCAACCCCGGTGACGTCGGCAGAATCGTGTCGAGAAAACCTAAGGACGTGTGGGCCGTGCGGCTTAAAGTCGGGACTTACCTCATAGATGGAAGGTATTTTAGAGCATTAGAACTCGATCAATAG MAASFSPTTPISRPSIRTLTSISSFNVSNNLSTRSQPRSIVKCESSASAADGQTPPAKSQKLEIGSPVIVIEAPKMIKTAASVPCLRVNSGIINPGDVGRIVSRKPKDVWAVRLKVGTYLIDGRYFRALELDQ Homology
BLAST of IVF0005713 vs. ExPASy TrEMBL
Match: A0A5A7T9E1 (Chlororespiratory reduction 42 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G00650 PE=4 SV=1) HSP 1 Score: 253.8 bits (647), Expect = 3.9e-64 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0
BLAST of IVF0005713 vs. ExPASy TrEMBL
Match: A0A1S3BMX2 (uncharacterized protein LOC103491596 OS=Cucumis melo OX=3656 GN=LOC103491596 PE=4 SV=1) HSP 1 Score: 253.8 bits (647), Expect = 3.9e-64 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0
BLAST of IVF0005713 vs. ExPASy TrEMBL
Match: A0A0A0L1Q6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G279890 PE=4 SV=1) HSP 1 Score: 231.9 bits (590), Expect = 1.6e-57 Identity = 122/133 (91.73%), Postives = 124/133 (93.23%), Query Frame = 0
BLAST of IVF0005713 vs. ExPASy TrEMBL
Match: A0A6J1FYJ7 (uncharacterized protein LOC111448751 OS=Cucurbita moschata OX=3662 GN=LOC111448751 PE=4 SV=1) HSP 1 Score: 208.8 bits (530), Expect = 1.4e-50 Identity = 115/135 (85.19%), Postives = 120/135 (88.89%), Query Frame = 0
BLAST of IVF0005713 vs. ExPASy TrEMBL
Match: A0A6J1JEC4 (uncharacterized protein LOC111483753 OS=Cucurbita maxima OX=3661 GN=LOC111483753 PE=4 SV=1) HSP 1 Score: 208.4 bits (529), Expect = 1.9e-50 Identity = 114/135 (84.44%), Postives = 119/135 (88.15%), Query Frame = 0
BLAST of IVF0005713 vs. NCBI nr
Match: XP_008449832.1 (PREDICTED: uncharacterized protein LOC103491596 [Cucumis melo] >KAA0040074.1 chlororespiratory reduction 42 [Cucumis melo var. makuwa] >TYK21698.1 chlororespiratory reduction 42 [Cucumis melo var. makuwa]) HSP 1 Score: 253 bits (645), Expect = 2.08e-84 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0
BLAST of IVF0005713 vs. NCBI nr
Match: XP_004142251.1 (uncharacterized protein LOC101219406 [Cucumis sativus] >KGN54061.1 hypothetical protein Csa_017922 [Cucumis sativus]) HSP 1 Score: 231 bits (588), Expect = 1.02e-75 Identity = 122/133 (91.73%), Postives = 124/133 (93.23%), Query Frame = 0
BLAST of IVF0005713 vs. NCBI nr
Match: XP_038900819.1 (uncharacterized protein LOC120087887 [Benincasa hispida]) HSP 1 Score: 211 bits (538), Expect = 4.15e-68 Identity = 114/133 (85.71%), Postives = 121/133 (90.98%), Query Frame = 0
BLAST of IVF0005713 vs. NCBI nr
Match: KAG6570328.1 (hypothetical protein SDJN03_29243, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010222.1 hypothetical protein SDJN02_27014, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 210 bits (534), Expect = 1.80e-67 Identity = 116/135 (85.93%), Postives = 121/135 (89.63%), Query Frame = 0
BLAST of IVF0005713 vs. NCBI nr
Match: XP_023513105.1 (uncharacterized protein LOC111777646 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 209 bits (531), Expect = 5.16e-67 Identity = 115/135 (85.19%), Postives = 121/135 (89.63%), Query Frame = 0
BLAST of IVF0005713 vs. TAIR 10
Match: AT5G20935.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3148 (InterPro:IPR021495); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 131.0 bits (328), Expect = 7.3e-31 Identity = 61/96 (63.54%), Postives = 78/96 (81.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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