IVF0005249 (gene) Melon (IVF77) v1

Overview


Name	IVF0005249
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	polyadenylate-binding protein RBP47
Location	chr11: 5045476 .. 5055096 (-)
RNA-Seq Expression	IVF0005249
Synteny	IVF0005249

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCAGCCTTCAAACGGTGCCGATCTCAATCCCCAGGCTCCTCATCCTCACCACCAATGGTTTCAACAACAACAACAGTATCAGCAGCAATGGATGGCGATGCAGTACCCTGCCGCCGCCATGGCCATGATGCACCAACAGCAGATGATGATGTATCCTCCTCAGCATTATATGGCGTATTCTCACCATCCTTATCAACAGCAACAACAGCAACAGCAGCAGCCGTCGTCGCAACAGCAGCAACAGCATGCTCAGTCGCAGAGACCTCGTAGACAGGGGTCAACGGACGAGGTTAAGACGCTTTGGATTGGCGACCTTCAGCCTTGGATGGACGAGACCTACCTCAATAATTGTTTCGCTCACACCGGCGAGGTCTAAACTTACTTGTCGTATTGAACTTTTATTTTTCACGTCTCTCTACTTCTATTTGTTGTTCGAGTTTCTGTAGATCGTTTCGTGACTTTCTGTAATGAGATCGATCGGATTTCTTTATCTTTTCTTGTGCTTTTGCGTTCTAGAATTGATTTGAAGTCTGTGAATCTGAGGTTGTTGACATTATTCTTGCTGCATCTTATATTGTTCTGAAACTGGATTGGTGGTCCAATACGAGTCTAGCCAATGTGAGAAGAATTGTTACTAAAGAGGGGGCGAGTTTTAGACTGATTTATTGTTGTATGAACATCTCTTTTTGCTTCCATTAACTCAAAAGAGGGACTAGGACTAGGACTAGTAATTTTCATTTTCATTTTAGAATGTGCTTTACTATACCTCTGTCCTTGTTTTGACACTTCAATTATTCGTGATATCTTAATGATAGAGGCAATTAGATCACAAGTAAATTAAATGCAATGAGTGACATTTGATTCACAACTAGGTAATTGCTATTTTCATACATAAGTAATTTAGATTATTAGAAGTGAGGATGTTTAGCAAGCACAAAGAGTCATGATCTGGTCATTTGGAATAATATGGAATAGTTGGAATTATAACTTTCATTTTTTAGATGCTAGAGACATGGCTATTTCCCACTTCATTCACACCTTTGCAAGGCCATTAAAATTTTTGTTTCCTTTCTCATTAAAAACATATTGTTTTAAATCAAAACATCTACGTTTAGTTTAAATTGAAATAATGCATGTTCTTTTCTGTGTTTCTTGTCTTAAAAGAACTTGCTGCTGAATTTTTCTTCATACAATGTATGATTGGTCTTCAGTGTCGTCGAATACTCTTCTGAAGGAATTAGTATGGTAATGTATAAGTATGATTATGATTACCATTTTTCTTACTTCATCTGTGCAGCATTTTTGGGTGACATCTTGCTTCCTTGCATATCTTGGTCAGTGTTTATATGGATACTTGCAGACTGTTAGGTTTGGTTCTTAGTTGAAGTTTCATATGTTCTTTTGGGCTTCGGTTCAAAGCTTTTCTGTAACTATTCTCTTGGTAACATTTTACTTAGTTGGAATGGAGCCCATTCCTTTAGTAGGGGTGTTTTTGTGGACTTGCTTTTTTCTCTGTCCTTTAATTGTTTCATTTTTTCTAAGTTGTTGTGTATATGAAAAAAATATGGATACCTCCTGACCGTCTTTTATATTTACCCTCGTCTAAATCAATGTCCATCTAGAACATCTTTTTTGGTCTTCAGTTGACTGAACTGTTTCTATTCTTTTGCTTCATAACACGCAGGTTTCCTCTGTTAAGGTTATATGCAATAAGCAAACTGGTCAATCGGAGGGCTATGGTTTTGTTGAGTTCTTCTCGCATACAACAGCCGAAAAAGTATTGCAGATTATAATGGTACTATAATGCCTAATACAGAGCTGCCTTTCCGTCTCAATTGGGCAACCTTTAGTGCAAATGATAGGCGACCGGACACTGGTTCTGACCTATCCATATTTGTTGGTGACTTGGCTGCCGATGTGACTGACGCTATGCTGCAAGAAACTTTTTCTAGTAGATACACATCTGTTAAAGGAGCAAAGGTGGTTATTGATTCAAATTCAGGTCGTTCAAAAGGTTACGGCTTTGTCAGGTTTGGTGATGAAAATGAAAGGACAAGGGCTATGGCTGAAATGAATGGGATATATTGTTCAAGTAGACCCATGCGCATTGGTGTTGCAACACCAAAGAAAGCATCTGGATATCAACAAGGTTACGCTTCGCAAGGTTAGTCTTTGTTCTTCAGGCATCACTGCTGGGTGGTGTTTCTAAGAAAATTGAAAATCTAGAAATCATCATATCTTACAGACTTCATGAATGAATGAGCTCATGTACCCCTATCCCTAGCACACACACACCTAACAAAAAGGCAATAAAAATGCAGAACCCAAAATATACACGCAATTTACCTTTCAAAGTGGTTTTGTTTGCAAGCAACAAGATTAATAAATAAAAAGATGATGGTTATTACAGAAGCTTGTCATGTACAGCAGTCAAATTGTTTGCGATGGTACTTCTGACAGTTTATTACTTCGTTCTTTGAGTTTTATGGAATTACTTCAGCCACAAAAGGGTTGATGGTACTGAGGCTAGGGTCTTATCTTATTTTTGTATTTTCTGGAATTCTGCATTCCATTGATATACCTTTAGCAATGGATATATCTTCGCAATACAAGTTGAACACTTTTAGAATATGAAATCTCTTATATTAACACTTTTCAGGATTTTTCATTATTTATCCAGTGCTTCTTTTCTCCACTAAATCTTCCCCCTCTAAATGCTGAACCATCTCAACATTTTTGGTTTTTGAGTCCATTGATGAATAGTATTCTGTTTGTCTGGTCATGCTTTTTGGCACATTATTCTTTATTTTTGGAAATCCATGTTGGATTATATTGTAACTTTTCTGGTACTGGTTTTTCTTGGATGGAGAATTTCTTTTTCCTTTTATCTTTTCCCTCTTATCTTTTCCCTCCTGCTGCAATGATAAGTGAAGCGTCATTTTTCAAGAACCAGTCTACTGGCCAGTATTAATGTCGTTGGTTGTTTGCCAACTAGGAGAAGAAGGCTAGAACTAGAAGTGATTGATGTTTTCCATTGGCAGGAGGAGGATCTTGATCGTCTTTTGTGGGTTGGCACTTAGCAGTTTGTTTATTCCTCGTGAAGTCGGCTTTTGAGGATTTGGGGTTGTGGTGGGTAATAGAATTGCCGCTCTAGCCTATATGTTGGAAGAGATACCGATGAACTCTTCCTTTTGTGATAAAGGAATAGTCCTTTGACAGGCTTGCTCTTTTGCTATTTTTTGGGGAGTATGACGTGAGAAGAATAGTAGAGTTTTTAGAAAGATCGAGAGGTCTTTGGAGAAGGTGTGGAAGGTTGTGAGGTTTATTAATGTGTTCATAAATTAGTTTTTCTATAGTTTTCAGCATGGTGTTATTTTTTGAATTGAAGTCTGTTTATGTAGTTGTTAAGGACTACTTTTGCAGCCTTGTTTTTTTTTTTTTTTTTTTGTATGCACTTATAAATTGTTTCATTTCTCTCCATGAAAGCTTGGTTTCTTATCTAAAAAAGATTTGACATTTTAATATGATACGGGCATGGTTCTTTAGGCATCTGCCCCAGTATTATTTTCTTTTTCGCAAATGGCTTTTAGACATAAGCGTAAGGAACATGGATTGGACTTCTACCTCTTGTGGAGAAGATGTTCTACTAATTTATTGTGAAGTTATAAGGTGTAAATGTTATTTATTTGTTTTTTTTTGTTGTTGAAGGAAACGGGCCTCTTTATTGATATAAGGTCTAAATGTTATTAAAATGTAATTTTTGTGTTTTCATTTTGTATGTTAGATGGGTGGTTGATTCTGATGCCAATTTCTGTCTTCTTTTATTTATATTTTATTTTATTTAGCTTTGGTACTGGCCGGTGGACATCCCAATGGCATGGCTGTTCAGGGTTCACAATCAGATAGCGAGTCAAACAACACAACTGTTAGTTTATCCCTCCCCGTCTCATGTTAATTTTCTTTCTTCCAATACATACCTAACCAACTTGTGGTACCTCAGATATTTGTTGGTGGCCTCGATTCTGATGTTAGTGATGAAGATCTCAAGCTAGCTTTCTCTAAATTTGGTGACGTTATCTCTGTGAAAATTCCAATTGGAAAAGGATGTGGATTTGTGCAATTTGCTAACAGGTATTTTTCTTCTTTTTCTTTCGTTAAACATGCAGCTGTCGTGCTAATCTTTATATCTTCAAAGTAATTAGTGGTTACAAAATGAGAAGGTCACTGCTCAGGCACAAGTTGGACTGACCCATGAAATAGCAGTCAGTTTTGGCTTGCCATAGTAGTTGGCCATATTGGGTCTAAGATTTATGACCTATGTGCCTGTGATTTTTAAAATATGTCGAGTAGGTAGCTTGCTTTTCTTGAAAATTTGTAGGCATGTACTTATTTATTATAATAATTGTAGCTATATGTTTTTAGAAAGTAATGGCAAGTGGAACATTTTAAAAATGCCAAATTGACTTAGTCACTTGATAGTAATCACTTCTCTCTCTCTCCTCTCTTAATTTTTAAATATATATTATATTAAAAAGAAACTTTTTGTTGTAAGCACCGATTTAATTAATCGATAATTAATTATTAACCTTGCCATTAATGGTTACTTCTTGTTTTTTGGTTGAATGCATATCTGTTTCCTATAAAAAAACGTCGTTAATAATTCCATTAATCATGGTAATCAGTCATTGACATGGGTTTTATTCTTTACCCTATTTAATATTATAATTTTTACGATTTACTATTTGTTATATTCCATATTAATTATGTTTGCTAAATATGTGTGTATGCATTTTGACAATATGTGGGTGGGAGATCAAACCTTGAGGTAATTGTACATATGTGTTGATTGAGCTATGCTCATTTTGCAATATTCTTGCAATATTTGATATTCATTAGGTTAATATTTTCAAGAGACCCTTAAAGGTAAGCACAGATGCCTGCAAGAATAAACAGCTAAAAAAAGTAGAATTTTAAGTCAAAAAACTTCAGAACATTTCAATCCATATTAAATTCATTTAATTTTTTGTATAAAAAATGTCCATAGCAAAAAGATAAAAAAAAAAAAAAAAACAGGGAGTGTACTAGGCCTATCACGAGAGTTATGCTTGGCCTTATGTTAGAGGATAGGCTCAAACCTACTGGGAGCCTAGGCCAGAACCAAGCTGTACGTTCTTGATGAGTGGCCTGGGCAACTTGTTTGTTCACACTATGAACGGTCATCTTAACATGTGAAAGGTTCTAATTTCTTGCAACTAACCTCCAGCCCCTAGTTTATTAGAAACTTTGAAAGTTTTATAGAACTCATATCTTGTCAATCCAGAGTGAGCTTTTACTAATTATTTCTCGTTCAGATTAGTCCAGTACTGATTGTTTCGAGGTTGTGTTATCAAGCAATTTCTAATTGTACCAAGAGTGAAATTGTGGATGGACATTTTAGTACTTACTTTCTTAGTCCGTGGCTCTTGCATGGATGGTTTCCTTGATAATTTCATTTGTTTTCTTTTTTGATTGGAAGAAAAGAAATAATCGAGGAACAACAGAAAGGCCTGGAAGGTGAGAAATTTTCTTTCCCCTTTCGTAATAGAAGGATTATACAAGTTAAGTTGCTATTGAAGAAGAATAGTTGCAACATATGTAGCATAAGGCTCTCTCCAATTTGAAGCTGTAAACTTGGCACTAAGGTCAGACGCGGGTGTTTATTTTTTAATCATACAACAAGCTACCTTTGCACGGTGTCTAAAATGCACATAACTGAACATTATTAGGGGAAGGAATAATGAAAGCCATTTTATTTTTTTCAGAAATCTTCCATCCCAAACAACTTAGCTGAGATATTCAGATCAAGCTTGGTCACCGGGTTTTATGAAAAAATTGCCAAATCTGCAAGATTACAAACTCAGTCTTCCAATTTTGTAACTGTACCATCATTTTGGTTAAAACAAGATGATAGAGCTGTAAACTTGCAATCACTAGGTTTCATGTGGGCTCTAACCTGGGACTTCCGTTATGAAGTTTTTTTTATAGATTATTCACAGGTGTCATTTATAGGATTGGATGCCCTTTTTATAGAGGCGCTCCTTTTTGTGGGCTGGTTTTTTGAGCCCATATATTCTTTCATTTTATTTTCAATAAAAGGTTGTTTCTAAAATAAAAGACACTCCACTCCATGTGAGTTGTGAGAGAACTAAGCCAAGCTCATTGTCTAATAATTAATCAAAGAGATTCTTTCTAAAGGAATGAATGCGTTCTTTCATTTCCCCTCCCCTTCAAGAATTTGTTTTCCCGATGAAGTTGATAATTCTTCTTCTTTTCTTTCCTCTTTTTGGAATGCTTTTAATGGTTTAAATTTGCAATTATTCGGTGATTGCTCATATGGGACAGATTTCGGTGCAAGATTGGTGCTGGTGGCTTGTCCGTATTCTTTTAGGCCCCTATTGCTTATATAATAGGTAGACAACAACTTGAAAAAGGAAAATTTCATATTCTCAAAGGAGGCTAGTCTTAATTACAATCATACGAGTGACATCCATGGATTTTGAGGTACACATGGAGAAGAGTCATCATGGCCAAATTTGGCTCTTACCCATGGATACTTGGCTGGATTCATTTTCCTTGTACCTCGTCTAAAGTTCCTTGGAAATCTATTCTTAAGCATAAGGATCGAACAAGAGCTTGATGCCCAACAACTCTTCCACCAGCTTTGGACTGGACTTTTGGATCAGAAGTGAACTGCTATTCAAGTTGTTTCATGCTTTTTAGACCCTTTTCTCCTTCCAACAGGGCATGAGATACATGGAACACTCCGCACATAATTACAATCTCAACATTCGAAGACAACTCTTTTTGGAGGAAGCTTTCACTCAGTGTGGGATTCCCTAACAGATTCGCTTTCACCATCTCACTTCCCAGATGATCCAGATGGCTCCTAGAACTAGAACCTTGCAGCTTCTTCTTGGTTTGCTTCCTCTTCAATGAACTATTAAAAAAACAAGGTTGTTTTTGCTCCTCTCTTTGTAGTGTTCAGTGGACATACATATGCAAGTTCATGAAAAAAGTTTAGTTTTGATAGGAAATTAATCTCGAGAGCATTCTATTAACACACAAGATGATGCTGAATCAAAATCCAGCATGAGATCTCTCTAGGATGGTGTATCTTATCTTATGCATGCAAGGGATAGACACACAAGGCAACCTATTCCTCAATTGTCCCTTTGCCAACAAATACTAGTCCTATATTCTGTCTTCCTTCAAATGTCACATAGCAACGAATTGACAACCGCTGAATGCTGAGTGTCTTTTCAGTGACTCGTATAGCTTGCTCTTCAATGTTTCAACTTAGACTCTCCCTAAGCTTGAGCTCTCCCCATTTCCACAATATGCTTCTTCAAGCTTTGTATGAGATCCCCTCGATACAATATGCTTAGGCTCCCCTTAAATACAATATTAATATGAAACTCTTCTCGAGTTCTACAATGGCTACTGGATCAAATAGTCTTAGTGACAAACACAACAATTTCTCACTATTAATACGTGAAGGTTGGGCTTTAGACAATCCCTAAGCTCAAAACATTCAAGCATTCACTTTTTTGATGAGGCGCCTAACCCTAAAAAGTATAGAGTAACATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAGCTAACTTATAGAATATTCATTTAGGAGATAATTAAATATTATTTGTAGGAAAATAAAGGCTAAAGATATATCGGAGAATCAATGCTCCATGAAATCTGCAAATCAATCTTTCATATATGGAAAAAATATTTTGTTGAATGTTTGTCGTTGACATGTTGTCTAGCATGTTGCTCAAATTTGCCTTTAATAAAATCAGCCAACCAATGCATTAACTTAACTCTTAATACAACTAATTAATACCAGATTAACTAATTTATAACAGAAACTATAACAAATATAACTGTCTAACTATACATGATAACAGTGTCTTCATACATTTTTTCTTCCCTTTTTGTAGAAAGAATGCTGAGGATGCATTACAGGGACTGAATGGAACAGTTATAGGGAAGCAAACTGTTCGTCTTTCTTGGGGCCGAAGTACAGGGAACAAGCAGGTCTGATCCTATGCTTTTTACTCGTCTTATGAATACTTTTGGATTATTAGCTGTTAACATATGACCTCTAGGACCTTTAGAAAACAAGAGTAGAAATGAAATTTGATGACTATGCATATAGAACTAGCCACTATGACACTTATATGGCGTGGGGATATGGATATCTGATCTTTCCTCCTTTCTTCTCTATTAAAAAATCACATTTGTTGATTTCATCTTAGATATTTTGATACTCTAATATCTAATGAACCTGTAGACCAACTTTGAATATATGTCAAGCATTTATTGGATAAAAGGAATAATGGATGTAAAAAGAAATACAAGGGAACTTATAAATTTAGAGGGTAAAAATATTGAACTTGTTTCTAAGCTAATAAGCATAATGAAGTTATGAATATTGATTTTTTGGACAGTCTACTTGATGTTGAATTACCTAGAGATATGTTTATGTAGGTCTTTTTTCCCTTCTTTTTTAAATCTTTTGACCTTCATGAGGCACTTATCATACTGTTTGTAATCAGTTTCTTCAACCTATTGATTTAATTGTTCACATTTCATGACTTGTTTCACACTCTGCACCATTGTCAGTCTGGCATCTTTCTCTTTGACCTCTCCTCATAGCAGCAATAGTTGTAGCCTTTTTCTTAGCTATTATGAAAATACTTTTTTGTGGGTATTTTACCTTCAAAAGCCTTTGAAGATGAACTACAAATATTTTGGGTATGTTTAGTAGGCAATTTAGATTCTTATGTTGATTTTACAGAATATCTGTTTTATAAGTTGTTTGGATTTTGTTTTTTAAAACTGTTTACTGTATTATCCAAACAAAATTTCTCAAAACAATATTCGTATGTTTTCAACGTTTTCAGAACTTGGAATTTGAAATTTTAAGATGTAAAATTGTCTTAAAAAAAGCTTAAAAAATATTAATAAATATAGTAGTTCATTTTATAAATTGAATTATTTTTGCTAAATGAAATATCTATTATATAATATTATAAATTATATATATTACAAAATGATAACTATACAAAAGCTCCATTAATCAATTAATAACAATTTATATCACATAGTATTCAGCGAGTAACTATAATTAGTTTATAGTTTGTAAAAATACTATAAACACATTGTTATGGAATTTCTAAATCTTCAACCAAACAAATATTTGAAAAGAATTTTATTTTCATTAAATCCCTTGTTTCCAAAACTCCGCCAAACAAGTCTTTTTTTTTCTCTTCTCAATTTTCATTTCTCTTTTTCGTTTGGGAAAAAAAAAGGATCATCTTTCATCCTTTTTCAAAATACTTGATTTAATAATGGCAGTGGAGAGGTGATTCAAATAACCAATGGAATGGTGGACGTTATGGTGGGCAAAGCTATGGTGGATATGGTGGCTATTACTCTGTACCACAGCATCAGGACCCAAACATTCATCCCACAGCTGCTGCTGCTGCTGCTGCAGTTAATGGCTCATCTTGA

mRNA sequence

ATGGCTCAGCCTTCAAACGGTGCCGATCTCAATCCCCAGGCTCCTCATCCTCACCACCAATGGTTTCAACAACAACAACAGTATCAGCAGCAATGGATGGCGATGCAGTACCCTGCCGCCGCCATGGCCATGATGCACCAACAGCAGATGATGATGTATCCTCCTCAGCATTATATGGCGTATTCTCACCATCCTTATCAACAGCAACAACAGCAACAGCAGCAGCCGTCGTCGCAACAGCAGCAACAGCATGCTCAGTCGCAGAGACCTCGTAGACAGGGGTCAACGGACGAGGTTAAGACGCTTTGGATTGGCGACCTTCAGCCTTGGATGGACGAGACCTACCTCAATAATTGTTTCGCTCACACCGGCGAGGTTTCCTCTGTTAAGGTTATATGCAATAAGCAAACTGGTCAATCGGAGGGCTATGGTTTTGTTGAGTTCTTCTCGCATACAACAGCCGAAAAACTGCCTTTCCGTCTCAATTGGGCAACCTTTAGTGCAAATGATAGGCGACCGGACACTGGTTCTGACCTATCCATATTTGTTGGTGACTTGGCTGCCGATGTGACTGACGCTATGCTGCAAGAAACTTTTTCTAGTAGATACACATCTGTTAAAGGAGCAAAGGTGGTTATTGATTCAAATTCAGGTCGTTCAAAAGGTTACGGCTTTGTCAGGTTTGGTGATGAAAATGAAAGGACAAGGGCTATGGCTGAAATGAATGGGATATATTGTTCAAGTAGACCCATGCGCATTGGTGTTGCAACACCAAAGAAAGCATCTGGATATCAACAAGGTTACGCTTCGCAAGCTTTGGTACTGGCCGGTGGACATCCCAATGGCATGGCTGTTCAGGGTTCACAATCAGATAGCGAGTCAAACAACACAACTATATTTGTTGGTGGCCTCGATTCTGATGTTAGTGATGAAGATCTCAAGCTAGCTTTCTCTAAATTTGGTGACGTTATCTCTGTGAAAATTCCAATTGGAAAAGGATGTGGATTTGTGCAATTTGCTAACAGAAAGAATGCTGAGGATGCATTACAGGGACTGAATGGAACAGTTATAGGGAAGCAAACTGTTCGTCTTTCTTGGGGCCGAAGTACAGGGAACAAGCAGTGGAGAGGTGATTCAAATAACCAATGGAATGGTGGACGTTATGGTGGGCAAAGCTATGGTGGATATGGTGGCTATTACTCTGTACCACAGCATCAGGACCCAAACATTCATCCCACAGCTGCTGCTGCTGCTGCTGCAGTTAATGGCTCATCTTGA

Coding sequence (CDS)

ATGGCTCAGCCTTCAAACGGTGCCGATCTCAATCCCCAGGCTCCTCATCCTCACCACCAATGGTTTCAACAACAACAACAGTATCAGCAGCAATGGATGGCGATGCAGTACCCTGCCGCCGCCATGGCCATGATGCACCAACAGCAGATGATGATGTATCCTCCTCAGCATTATATGGCGTATTCTCACCATCCTTATCAACAGCAACAACAGCAACAGCAGCAGCCGTCGTCGCAACAGCAGCAACAGCATGCTCAGTCGCAGAGACCTCGTAGACAGGGGTCAACGGACGAGGTTAAGACGCTTTGGATTGGCGACCTTCAGCCTTGGATGGACGAGACCTACCTCAATAATTGTTTCGCTCACACCGGCGAGGTTTCCTCTGTTAAGGTTATATGCAATAAGCAAACTGGTCAATCGGAGGGCTATGGTTTTGTTGAGTTCTTCTCGCATACAACAGCCGAAAAACTGCCTTTCCGTCTCAATTGGGCAACCTTTAGTGCAAATGATAGGCGACCGGACACTGGTTCTGACCTATCCATATTTGTTGGTGACTTGGCTGCCGATGTGACTGACGCTATGCTGCAAGAAACTTTTTCTAGTAGATACACATCTGTTAAAGGAGCAAAGGTGGTTATTGATTCAAATTCAGGTCGTTCAAAAGGTTACGGCTTTGTCAGGTTTGGTGATGAAAATGAAAGGACAAGGGCTATGGCTGAAATGAATGGGATATATTGTTCAAGTAGACCCATGCGCATTGGTGTTGCAACACCAAAGAAAGCATCTGGATATCAACAAGGTTACGCTTCGCAAGCTTTGGTACTGGCCGGTGGACATCCCAATGGCATGGCTGTTCAGGGTTCACAATCAGATAGCGAGTCAAACAACACAACTATATTTGTTGGTGGCCTCGATTCTGATGTTAGTGATGAAGATCTCAAGCTAGCTTTCTCTAAATTTGGTGACGTTATCTCTGTGAAAATTCCAATTGGAAAAGGATGTGGATTTGTGCAATTTGCTAACAGAAAGAATGCTGAGGATGCATTACAGGGACTGAATGGAACAGTTATAGGGAAGCAAACTGTTCGTCTTTCTTGGGGCCGAAGTACAGGGAACAAGCAGTGGAGAGGTGATTCAAATAACCAATGGAATGGTGGACGTTATGGTGGGCAAAGCTATGGTGGATATGGTGGCTATTACTCTGTACCACAGCATCAGGACCCAAACATTCATCCCACAGCTGCTGCTGCTGCTGCTGCAGTTAATGGCTCATCTTGA

Protein sequence

MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMAYSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNNCFAHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKLPFRLNWATFSANDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAVQGSQSDSESNNTTIFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGCGFVQFANRKNAEDALQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYYSVPQHQDPNIHPTAAAAAAAVNGSS

Homology

[Close]

BLAST of IVF0005249 vs. ExPASy Swiss-Prot
Match: Q0WW84 (Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana OX=3702 GN=RBP47B PE=1 SV=1)

HSP 1 Score: 471.1 bits (1211), Expect = 1.3e-131
Identity = 273/437 (62.47%), Postives = 316/437 (72.31%), Query Frame = 0


Query: 3   QPSNGADL----------NPQAPHPHHQWFQQQQQYQQQWM-AMQY-PAAAMAMMHQQQM 62
           Q +NG+D           N Q P P  QW QQQQQ QQQWM AMQY PAAAM MM QQQM
Sbjct: 2   QTTNGSDSTLATSGATPPNQQTPPPPQQW-QQQQQQQQQWMAAMQYPPAAAMMMMQQQQM 61

Query: 63  MMYPPQHYMAYSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPW 122
           +MYP Q Y+ Y+  PYQQ   Q  Q  S QQ QH Q +   R GS D+VKTLW+GDL  W
Sbjct: 62  LMYPHQ-YVPYNQGPYQQHHPQLHQYGSYQQHQHQQHKAIDR-GSGDDVKTLWVGDLLHW 121

Query: 123 MDETYLNNCFAHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKL------------- 182
           MDETYL++CF+HTGEVSSVKVI NK T QSEGYGFVEF S   AE++             
Sbjct: 122 MDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEEVLQNYSGSVMPNSD 181

Query: 183 -PFRLNWATFSANDRRP-DTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDS 242
            PFR+NWA+FS  ++R  + G DLS+FVGDL+ DVTD +L ETFS RY SVK AKVVIDS
Sbjct: 182 QPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDS 241

Query: 243 NSGRSKGYGFVRFGDENERTRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVL 302
           N+GRSKGYGFVRFGDENER+RA+ EMNG YCS+R MR+G+ATPK+A   QQ ++SQA++L
Sbjct: 242 NTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIATPKRAIANQQQHSSQAVIL 301

Query: 303 AGGH-PNGMAVQGSQSDSESNNTTIFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGC 362
           AGGH  NG    GSQSD ES N TIFVGG+D DV DEDL+  FS+FG+V+SVKIP+GKGC
Sbjct: 302 AGGHGSNGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPVGKGC 361

Query: 363 GFVQFANRKNAEDALQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYG 412
           GFVQFA+RK+AEDA++ LNGTVIGK TVRLSWGRS  NKQWRGDS  QWNGG   G  Y 
Sbjct: 362 GFVQFADRKSAEDAIESLNGTVIGKNTVRLSWGRSP-NKQWRGDSGQQWNGGYSRGHGYN 421

[Close]

BLAST of IVF0005249 vs. ExPASy Swiss-Prot
Match: F4I3B3 (Polyadenylate-binding protein RBP47A OS=Arabidopsis thaliana OX=3702 GN=RBP47A PE=2 SV=1)

HSP 1 Score: 468.8 bits (1205), Expect = 6.6e-131
Identity = 274/423 (64.78%), Postives = 311/423 (73.52%), Query Frame = 0


Query: 13  QAPHPHHQWFQQQQQYQQQWMA--MQYPAAAMAMMHQQQMMMYPPQHYMAYSHHPYQQQQ 72
           Q+  P  Q  QQQ Q QQQWMA   QYPAAAMAMM QQQMMMYP   Y  Y+   YQQ  
Sbjct: 29  QSTPPPQQQQQQQWQQQQQWMAAMQQYPAAAMAMMQQQQMMMYPHPQYAPYNQAAYQQHP 88

Query: 73  QQQQQPSSQQQQQHAQSQRPRRQGS-TDEVKTLWIGDLQPWMDETYLNNCFAHTGEVSSV 132
           Q Q     QQQQQH QSQ+  R GS  D+VKTLW+GDL  WMDETYL+ CF+HT EVSSV
Sbjct: 89  QFQYAAYQQQQQQHHQSQQQPRGGSGGDDVKTLWVGDLLHWMDETYLHTCFSHTNEVSSV 148

Query: 133 KVICNKQTGQSEGYGFVEFFSHTTAEKL--------------PFRLNWATFSANDRR-PD 192
           KVI NKQT QSEGYGFVEF S + AE+               PFRLNWA+FS  ++R  +
Sbjct: 149 KVIRNKQTCQSEGYGFVEFLSRSAAEEALQSFSGVTMPNAEQPFRLNWASFSTGEKRASE 208

Query: 193 TGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENER 252
            G DLSIFVGDLA DV+DA+L ETF+ RY SVKGAKVVIDSN+GRSKGYGFVRFGDENER
Sbjct: 209 NGPDLSIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENER 268

Query: 253 TRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAVQGSQSDSES 312
           +RAM EMNG +CSSR MR+G+ATPK+A+ Y Q   SQAL LAGGH       GS SD ES
Sbjct: 269 SRAMTEMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQALTLAGGHGG----NGSMSDGES 328

Query: 313 NNTTIFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGCGFVQFANRKNAEDALQGLNG 372
           NN+TIFVGGLD+DV++EDL   FS FG+V+SVKIP+GKGCGFVQFANR++AE+A+  LNG
Sbjct: 329 NNSTIFVGGLDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFVQFANRQSAEEAIGNLNG 388

Query: 373 TVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYYSVPQHQDPNIHPTA 418
           TVIGK TVRLSWGRS  NKQWR DS NQWNGG   GQ Y    GY     +QD N++ TA
Sbjct: 389 TVIGKNTVRLSWGRSP-NKQWRSDSGNQWNGGYSRGQGYN--NGY----ANQDSNMYATA 440

[Close]

BLAST of IVF0005249 vs. ExPASy Swiss-Prot
Match: Q9LEB3 (Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP47 PE=1 SV=1)

HSP 1 Score: 468.8 bits (1205), Expect = 6.6e-131
Identity = 261/438 (59.59%), Postives = 323/438 (73.74%), Query Frame = 0


Query: 6   NGADLNPQAPHPHHQWFQQQ------QQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYM 65
           NG D+N Q      Q  QQQ      QQYQQQWMAMQYPAAAMAM   QQ MMY  Q+  
Sbjct: 2   NGGDMNQQQQQQQQQHQQQQQQWLAMQQYQQQWMAMQYPAAAMAM---QQQMMYGQQYMP 61

Query: 66  AYSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNNC 125
            Y  H  QQQQ+ QQ P+             + Q S+++ KT+WIGDLQ WMDE+YL++C
Sbjct: 62  YYQQH--QQQQKMQQSPT-------------QIQSSSEDNKTIWIGDLQQWMDESYLHSC 121

Query: 126 FAHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKL--------------PFRLNWAT 185
           F+  GEV SVK+I NKQTGQSE YGFVEF +H  AEK+              PFRLNWA 
Sbjct: 122 FSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVLQSYNGTMMPNTEQPFRLNWAG 181

Query: 186 FSANDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGF 245
           FS  ++R +TGSD SIFVGDLA+DVTD ML++TF+SRY S+KGAKVV+D+N+G SKGYGF
Sbjct: 182 FSTGEKRAETGSDFSIFVGDLASDVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGF 241

Query: 246 VRFGDENERTRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGH-PNGMA 305
           VRFGDE+ER+RAM EMNG+YCSSR MRIGVATPKK S ++Q Y+SQA++L+GG+  NG A
Sbjct: 242 VRFGDESERSRAMTEMNGVYCSSRAMRIGVATPKKPSAHEQ-YSSQAVILSGGYASNGAA 301

Query: 306 VQGSQSDSESNNTTIFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGCGFVQFANRKN 365
             GSQSD +S+NTTIFVGGLDS+V+DE+L+ +F++FG+V+SVKIP GKGCGFVQF++R +
Sbjct: 302 THGSQSDGDSSNTTIFVGGLDSEVTDEELRQSFNQFGEVVSVKIPAGKGCGFVQFSDRSS 361

Query: 366 AEDALQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYYSVPQ 423
           A++A+Q L+G +IGKQ VRLSWGRS  NKQ R DS +QWNGG  G Q+YGGYG  Y   Q
Sbjct: 362 AQEAIQKLSGAIIGKQAVRLSWGRSPANKQMRTDSGSQWNGGYNGRQNYGGYG--YGASQ 418

[Close]

BLAST of IVF0005249 vs. ExPASy Swiss-Prot
Match: Q9SX80 (Polyadenylate-binding protein RBP47C' OS=Arabidopsis thaliana OX=3702 GN=RBP47C' PE=2 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 1.6e-100
Identity = 228/428 (53.27%), Postives = 273/428 (63.79%), Query Frame = 0


Query: 6   NGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMAYSHHP 65
           N    +P  P PH             W  M+YP   M        MMY P   M +S  P
Sbjct: 39  NQPKTSPTPPPPH-------------W--MRYPPVLM------PQMMYAPPPPMPFS--P 98

Query: 66  YQQQQQQQQQPSSQQQQQHAQSQRPRRQGS-TDEVKTLWIGDLQPWMDETYLNNCF--AH 125
           Y Q               H QS+  + Q +   E KT+W+GDLQ WMDE YLN+ F  A 
Sbjct: 99  YHQY--------PNHHHFHHQSRGNKHQNAFNGENKTIWVGDLQNWMDEAYLNSAFTSAE 158

Query: 126 TGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKL--------------PFRLNWATFSA 185
             E+ S+KVI NK  G SEGYGFVEF SH  A+K+              PFRLNWA+FS 
Sbjct: 159 EREIVSLKVIRNKHNGSSEGYGFVEFESHDVADKVLQEFNGAPMPNTDQPFRLNWASFST 218

Query: 186 NDRR-PDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVR 245
            ++R  + G DLSIFVGDLA DV+DA+L ETFS +Y SVK AKVV+D+N+GRSKGYGFVR
Sbjct: 219 GEKRLENNGPDLSIFVGDLAPDVSDALLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVR 278

Query: 246 FGDENERTRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGH-PNGMAVQ 305
           FGDENERT+AM EMNG+ CSSR MRIG ATP+K +GYQQ          GG+ P+G    
Sbjct: 279 FGDENERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQQ---------QGGYMPSGAF-- 338

Query: 306 GSQSDSESNNTTIFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGCGFVQFANRKNAE 365
            ++S+ ++ NTTIFVGGLDS V+DEDLK  FS+FG+++SVKIP+GKGCGFVQF NR NAE
Sbjct: 339 -TRSEGDTINTTIFVGGLDSSVTDEDLKQPFSEFGEIVSVKIPVGKGCGFVQFVNRPNAE 398

Query: 366 DALQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYYSVPQHQ 415
           +AL+ LNGTVIGKQTVRLSWGR+  NKQ R    NQW    YGGQ Y GYG  Y VPQ  
Sbjct: 399 EALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQWVDPYYGGQFYNGYG--YMVPQ-P 420

[Close]

BLAST of IVF0005249 vs. ExPASy Swiss-Prot
Match: Q9SX79 (Polyadenylate-binding protein RBP47C OS=Arabidopsis thaliana OX=3702 GN=RBP47C PE=2 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 2.2e-97
Identity = 224/433 (51.73%), Postives = 275/433 (63.51%), Query Frame = 0


Query: 9   DLNPQAPHPHHQWFQQQQQYQQQ--------WMAMQYPAAAMAMMHQQQMMMYPPQHYMA 68
           D  P  P P  Q   ++++ Q +        W  M+YP   + + HQ   MMY P  +  
Sbjct: 20  DNQPPPPPPPPQQPAKEEENQPKTSPTPPPHW--MRYPPTVI-IPHQ---MMYAPPPFPP 79

Query: 69  YSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGS-TDEVKTLWIGDLQPWMDETYLNNC 128
           Y  +P                  H QS+  + Q +   E KT+W+GDL  WMDE YLN+ 
Sbjct: 80  YHQYP-------------NHHHLHHQSRGNKHQNAFNGENKTIWVGDLHHWMDEAYLNSS 139

Query: 129 FA--HTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKL--------------PFRLNW 188
           FA     E+ SVKVI NK  G SEGYGFVEF SH  A+K+              PFRLNW
Sbjct: 140 FASGDEREIVSVKVIRNKNNGLSEGYGFVEFESHDVADKVLREFNGTTMPNTDQPFRLNW 199

Query: 189 ATFSANDRR-PDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKG 248
           A+FS  ++R  + G DLSIFVGDL+ DV+D +L ETFS +Y SVK AKVV+D+N+GRSKG
Sbjct: 200 ASFSTGEKRLENNGPDLSIFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKG 259

Query: 249 YGFVRFGDENERTRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGH-PN 308
           YGFVRFGDENERT+AM EMNG+ CSSR MRIG ATP+K +GYQQ          GG+ PN
Sbjct: 260 YGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQQ---------QGGYMPN 319

Query: 309 GMAVQGSQSDSESNNTTIFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGCGFVQFAN 368
           G     ++ + +  NTTIFVGGLDS V+DEDLK  F++FG+++SVKIP+GKGCGFVQF N
Sbjct: 320 GTL---TRPEGDIMNTTIFVGGLDSSVTDEDLKQPFNEFGEIVSVKIPVGKGCGFVQFVN 379

Query: 369 RKNAEDALQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYYS 415
           R NAE+AL+ LNGTVIGKQTVRLSWGR+  NKQ R    NQW    YGGQ Y GYG  Y 
Sbjct: 380 RPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQWVDPYYGGQFYNGYG--YM 418

[Close]

BLAST of IVF0005249 vs. ExPASy TrEMBL
Match: A0A1S3C9N4 (polyadenylate-binding protein RBP47 OS=Cucumis melo OX=3656 GN=LOC103498402 PE=4 SV=1)

HSP 1 Score: 826.6 bits (2134), Expect = 4.6e-236
Identity = 425/439 (96.81%), Postives = 425/439 (96.81%), Query Frame = 0


Query: 1   MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMA 60
           MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMA
Sbjct: 1   MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMA 60

Query: 61  YSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNNCF 120
           YSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNNCF
Sbjct: 61  YSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNNCF 120

Query: 121 AHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEK--------------LPFRLNWATF 180
           AHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEK              LPFRLNWATF
Sbjct: 121 AHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLNWATF 180

Query: 181 SANDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFV 240
           SANDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFV
Sbjct: 181 SANDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFV 240

Query: 241 RFGDENERTRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAVQ 300
           RFGDENERTRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAVQ
Sbjct: 241 RFGDENERTRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAVQ 300

Query: 301 GSQSDSESNNTTIFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGCGFVQFANRKNAE 360
           GSQSDSESNNTTIFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGCGFVQFANRKNAE
Sbjct: 301 GSQSDSESNNTTIFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGCGFVQFANRKNAE 360

Query: 361 DALQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYYSVPQHQ 420
           DALQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYYSVPQHQ
Sbjct: 361 DALQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYYSVPQHQ 420

Query: 421 DPNIHPTAAAAAAAVNGSS 426
           DPNIHPTAAAAAAAVNGSS
Sbjct: 421 DPNIHPTAAAAAAAVNGSS 439

[Close]

BLAST of IVF0005249 vs. ExPASy TrEMBL
Match: A0A6J1JGT7 (polyadenylate-binding protein RBP47-like OS=Cucurbita maxima OX=3661 GN=LOC111484248 PE=4 SV=1)

HSP 1 Score: 741.5 bits (1913), Expect = 2.0e-210
Identity = 382/439 (87.02%), Postives = 398/439 (90.66%), Query Frame = 0


Query: 1   MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMA 60
           MAQPSNGADLNPQAPHPH QWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYM 
Sbjct: 1   MAQPSNGADLNPQAPHPHQQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMT 60

Query: 61  YSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNNCF 120
           YSH PY    QQQ  P  QQQQQ AQSQRPRRQGSTDEVKTLWIGDLQPWMDETYL+NCF
Sbjct: 61  YSHLPY----QQQPPPLQQQQQQQAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLHNCF 120

Query: 121 AHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEK--------------LPFRLNWATF 180
           AH GEV SVKVICNKQTGQSEGYGFVEF+SH TA+K              LPFRLNWATF
Sbjct: 121 AHIGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNTDLPFRLNWATF 180

Query: 181 SANDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFV 240
           S +DRRPDTGSDLSIFVGDLAADVTDAMLQETFSS+YTSVKGAKVVIDSNSGRSKGYGFV
Sbjct: 181 SGSDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGFV 240

Query: 241 RFGDENERTRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAVQ 300
           RFGDE+ERTRA+ EMNGIYCSSRPMRIGVATPKKASGYQQGY+SQALVLAGGH NGMAVQ
Sbjct: 241 RFGDESERTRAVTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQ 300

Query: 301 GSQSDSESNNTTIFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGCGFVQFANRKNAE 360
           GSQSD ESNNTTIFVGGLDSDVSDEDL+  FSKFG+++SVKIPIGKGCGFVQFANRKNAE
Sbjct: 301 GSQSDGESNNTTIFVGGLDSDVSDEDLRQPFSKFGEIVSVKIPIGKGCGFVQFANRKNAE 360

Query: 361 DALQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYYSVPQHQ 420
           DA+QGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQ YGGYGGYYS+PQHQ
Sbjct: 361 DAIQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQGYGGYGGYYSIPQHQ 420

Query: 421 DPNIHPTAAAAAAAVNGSS 426
           D N+H    AAAAAVNG+S
Sbjct: 421 DANMH----AAAAAVNGTS 431

[Close]

BLAST of IVF0005249 vs. ExPASy TrEMBL
Match: A0A6J1FUF1 (polyadenylate-binding protein RBP47-like OS=Cucurbita moschata OX=3662 GN=LOC111448515 PE=4 SV=1)

HSP 1 Score: 736.1 bits (1899), Expect = 8.2e-209
Identity = 381/439 (86.79%), Postives = 397/439 (90.43%), Query Frame = 0


Query: 1   MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMA 60
           MAQPSNGADLNPQAPHPH QWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYM 
Sbjct: 1   MAQPSNGADLNPQAPHPHQQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMT 60

Query: 61  YSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNNCF 120
           YSH PY     QQQ P  QQQQQ AQSQRPRRQGSTDEVKTLWIGDLQPWMDETYL+NCF
Sbjct: 61  YSHLPY-----QQQPPPLQQQQQQAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLHNCF 120

Query: 121 AHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEK--------------LPFRLNWATF 180
           AH GEV SVKVICNKQTGQSEGYGFVEF+SH TA+K              LPFRLNWATF
Sbjct: 121 AHIGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNTDLPFRLNWATF 180

Query: 181 SANDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFV 240
           S +DRRPDTGSDLSIFVGDLAADVTDAMLQETFSS+YTSVKGAKVVIDSNSGRSKGYGFV
Sbjct: 181 SGSDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGFV 240

Query: 241 RFGDENERTRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAVQ 300
           RFGDE+ERTRA+ EMNGIYCSSRPMRIGVATPKKASGYQQGY+SQALVLAGGH NGMAVQ
Sbjct: 241 RFGDESERTRAVTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQ 300

Query: 301 GSQSDSESNNTTIFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGCGFVQFANRKNAE 360
           GSQSD ESNNTTIFVGGLDSDVSDEDL+  FSKFG+++SVKIPIGKGCGFVQFANRKNAE
Sbjct: 301 GSQSDGESNNTTIFVGGLDSDVSDEDLRQPFSKFGEIVSVKIPIGKGCGFVQFANRKNAE 360

Query: 361 DALQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYYSVPQHQ 420
           DA+QGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQ YGGYGGYY +PQHQ
Sbjct: 361 DAIQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQGYGGYGGYY-IPQHQ 420

Query: 421 DPNIHPTAAAAAAAVNGSS 426
           D N+H    AAAAAVNG+S
Sbjct: 421 DANMH----AAAAAVNGTS 429

[Close]

BLAST of IVF0005249 vs. ExPASy TrEMBL
Match: A0A6J1D3C6 (polyadenylate-binding protein RBP47 OS=Momordica charantia OX=3673 GN=LOC111017220 PE=4 SV=1)

HSP 1 Score: 729.2 bits (1881), Expect = 1.0e-206
Identity = 380/439 (86.56%), Postives = 395/439 (89.98%), Query Frame = 0


Query: 2   AQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMAY 61
           AQPSNGADLNPQ PHPHHQWF QQQQYQQQWMAMQYPAAAMAMM QQQMMMYPPQHYMAY
Sbjct: 3   AQPSNGADLNPQPPHPHHQWF-QQQQYQQQWMAMQYPAAAMAMMQQQQMMMYPPQHYMAY 62

Query: 62  SHHPYQQQQQQQQQPSSQQQQQHAQSQRPRR-QGSTDEVKTLWIGDLQPWMDETYLNNCF 121
           SHHPYQQQQQQ      QQQQQ AQ QRPRR QGSTDEVKTLWIGDLQPWMDETYL++CF
Sbjct: 63  SHHPYQQQQQQ-----PQQQQQQAQPQRPRRLQGSTDEVKTLWIGDLQPWMDETYLHSCF 122

Query: 122 AHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEK--------------LPFRLNWATF 181
            HTGEV SVKVICNKQTGQSEGYGFVEF+SH TA+K              LPFRLNWATF
Sbjct: 123 VHTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNTELPFRLNWATF 182

Query: 182 SANDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFV 241
           SA DRRPDTGSDLSIFVGDLAADVTDAMLQETFSSR+TSVKGAKVVIDSNSGRSKGYGFV
Sbjct: 183 SATDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSRFTSVKGAKVVIDSNSGRSKGYGFV 242

Query: 242 RFGDENERTRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAVQ 301
           RFGDENERTRAM EMNG+YCSSRPMRIGVATPKKASGYQQGY+SQALVLAGGH NGMAVQ
Sbjct: 243 RFGDENERTRAMTEMNGVYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQ 302

Query: 302 GSQSDSESNNTTIFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGCGFVQFANRKNAE 361
           GSQ D ESNNTTIFVGGLDSDVSDEDL+  FSKFG+++SVKIPIGKGCGFVQFANRKNAE
Sbjct: 303 GSQPDGESNNTTIFVGGLDSDVSDEDLRQPFSKFGEIVSVKIPIGKGCGFVQFANRKNAE 362

Query: 362 DALQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYYSVPQHQ 421
           DA+QGLNGTVIGKQT+RLSWGRSTGNKQWRGDSNNQWNGGRYGGQ YGGY GYYSVPQHQ
Sbjct: 363 DAIQGLNGTVIGKQTIRLSWGRSTGNKQWRGDSNNQWNGGRYGGQGYGGYSGYYSVPQHQ 422

Query: 422 DPNIHPTAAAAAAAVNGSS 426
           D N++   A AAA VNGSS
Sbjct: 423 DTNMN---ATAAAEVNGSS 432

[Close]

BLAST of IVF0005249 vs. ExPASy TrEMBL
Match: A0A6J1KYU5 (polyadenylate-binding protein RBP47-like OS=Cucurbita maxima OX=3661 GN=LOC111499959 PE=4 SV=1)

HSP 1 Score: 720.3 bits (1858), Expect = 4.7e-204
Identity = 378/451 (83.81%), Postives = 395/451 (87.58%), Query Frame = 0


Query: 1   MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMA 60
           MAQPSNGADLNPQAPHPHHQW+QQQ+QYQQQWMA+QYPAAAMAMM QQQMMMYPPQHY+A
Sbjct: 1   MAQPSNGADLNPQAPHPHHQWYQQQRQYQQQWMAVQYPAAAMAMMQQQQMMMYPPQHYVA 60

Query: 61  YSHHPYQQQQQQQQQP----SSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYL 120
           YSHHPYQQQQ  QQQP      QQQQQ  QSQRPRRQGSTD+VKTLWIGDLQ WMDETYL
Sbjct: 61  YSHHPYQQQQHPQQQPPPSQQQQQQQQQPQSQRPRRQGSTDDVKTLWIGDLQAWMDETYL 120

Query: 121 NNCFAHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEK--------------LPFRLN 180
           +NCFAHTGEV SVKVICNKQTGQSEGYGFVEF+SH TA+K              LPFRLN
Sbjct: 121 HNCFAHTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAMMPNTDLPFRLN 180

Query: 181 WATFSANDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKG 240
           WATFS NDRRPDTGSDLSIFVGDLAADVTDAMLQETFSS+YTSVKGAKVVIDSNSGRSKG
Sbjct: 181 WATFSGNDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKG 240

Query: 241 YGFVRFGDENERTRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNG 300
           YGFVRFGDENE++RAM EMNGIYCSSRPMRIGVATPKKASGYQQGY+SQALVLAGGH NG
Sbjct: 241 YGFVRFGDENEKSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANG 300

Query: 301 MAVQGSQSDSESNNTTIFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGCGFVQFANR 360
           MAVQG QSD ESNNTTIFVGGLDSDVSDEDLK  FSKFG+++SVKIPIGKGCGFVQFANR
Sbjct: 301 MAVQGPQSDGESNNTTIFVGGLDSDVSDEDLKQPFSKFGEIVSVKIPIGKGCGFVQFANR 360

Query: 361 KNAEDALQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSY-GGYGGYYS 420
           KNAEDA+QGLNGTVIGKQ VRLSWGRSTG+KQWR DSNNQWNGGRYG   Y GGYGGYYS
Sbjct: 361 KNAEDAIQGLNGTVIGKQIVRLSWGRSTGSKQWRSDSNNQWNGGRYGVPGYGGGYGGYYS 420

Query: 421 VPQHQDPNIHPTAA-------AAAAAVNGSS 426
           VPQ QD N   T         A AAAVNGSS
Sbjct: 421 VPQQQDANTQATVGAELMGHLAPAAAVNGSS 451

[Close]

BLAST of IVF0005249 vs. NCBI nr
Match: XP_008459212.1 (PREDICTED: polyadenylate-binding protein RBP47 [Cucumis melo])

HSP 1 Score: 823 bits (2126), Expect = 3.50e-300
Identity = 425/439 (96.81%), Postives = 425/439 (96.81%), Query Frame = 0


Query: 1   MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMA 60
           MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMA
Sbjct: 1   MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMA 60

Query: 61  YSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNNCF 120
           YSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNNCF
Sbjct: 61  YSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNNCF 120

Query: 121 AHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEK--------------LPFRLNWATF 180
           AHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEK              LPFRLNWATF
Sbjct: 121 AHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLNWATF 180

Query: 181 SANDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFV 240
           SANDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFV
Sbjct: 181 SANDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFV 240

Query: 241 RFGDENERTRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAVQ 300
           RFGDENERTRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAVQ
Sbjct: 241 RFGDENERTRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAVQ 300

Query: 301 GSQSDSESNNTTIFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGCGFVQFANRKNAE 360
           GSQSDSESNNTTIFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGCGFVQFANRKNAE
Sbjct: 301 GSQSDSESNNTTIFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGCGFVQFANRKNAE 360

Query: 361 DALQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYYSVPQHQ 420
           DALQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYYSVPQHQ
Sbjct: 361 DALQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYYSVPQHQ 420

Query: 421 DPNIHPTAAAAAAAVNGSS 425
           DPNIHPTAAAAAAAVNGSS
Sbjct: 421 DPNIHPTAAAAAAAVNGSS 439

[Close]

BLAST of IVF0005249 vs. NCBI nr
Match: XP_004145357.2 (polyadenylate-binding protein RBP47 [Cucumis sativus] >KAE8651855.1 hypothetical protein Csa_006374 [Cucumis sativus])

HSP 1 Score: 806 bits (2083), Expect = 1.16e-293
Identity = 416/439 (94.76%), Postives = 421/439 (95.90%), Query Frame = 0


Query: 1   MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMA 60
           MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQM+MYPPQHYMA
Sbjct: 1   MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMVMYPPQHYMA 60

Query: 61  YSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNNCF 120
           YSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNNCF
Sbjct: 61  YSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNNCF 120

Query: 121 AHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEK--------------LPFRLNWATF 180
           AHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEK              LPFRLNWATF
Sbjct: 121 AHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLNWATF 180

Query: 181 SANDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFV 240
           SANDRRPDTGSDLSIFVGDLAADVTDA+LQETFSSRYTSVKGAKVVIDSNSGRSKGYGFV
Sbjct: 181 SANDRRPDTGSDLSIFVGDLAADVTDAILQETFSSRYTSVKGAKVVIDSNSGRSKGYGFV 240

Query: 241 RFGDENERTRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAVQ 300
           RFGDENERTRAM EMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAVQ
Sbjct: 241 RFGDENERTRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAVQ 300

Query: 301 GSQSDSESNNTTIFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGCGFVQFANRKNAE 360
           GSQSDSESNNTTIFVGGLDSDVSDEDLK AFSKFGDV+SVKIPIGKGCGFVQFANRKNAE
Sbjct: 301 GSQSDSESNNTTIFVGGLDSDVSDEDLKQAFSKFGDVVSVKIPIGKGCGFVQFANRKNAE 360

Query: 361 DALQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYYSVPQHQ 420
           DA+QGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYYSVPQHQ
Sbjct: 361 DAIQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYYSVPQHQ 420

Query: 421 DPNIHPTAAAAAAAVNGSS 425
           DPN+HPTAAAAA  VNGSS
Sbjct: 421 DPNMHPTAAAAA--VNGSS 437

[Close]

BLAST of IVF0005249 vs. NCBI nr
Match: XP_038901011.1 (polyadenylate-binding protein RBP47 [Benincasa hispida])

HSP 1 Score: 765 bits (1975), Expect = 3.07e-277
Identity = 399/440 (90.68%), Postives = 407/440 (92.50%), Query Frame = 0


Query: 1   MAQPSNGADLNPQAPHPHH-QWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYM 60
           MAQPSNGADLNPQAPHPHH QWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYM
Sbjct: 1   MAQPSNGADLNPQAPHPHHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYM 60

Query: 61  AYSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNNC 120
           AYSHHPYQQQQQQ QQPS QQ QQ AQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNNC
Sbjct: 61  AYSHHPYQQQQQQHQQPSQQQHQQ-AQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNNC 120

Query: 121 FAHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEK--------------LPFRLNWAT 180
           FAHTGEV SVKVICNKQTGQSEGYGFVEF+SH TA+K              LPFRLNWAT
Sbjct: 121 FAHTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKILQNYNGAIMPNTDLPFRLNWAT 180

Query: 181 FSANDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGF 240
           FS+NDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSRY SVKGAKVVIDSNSGRSKGYGF
Sbjct: 181 FSSNDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSRYASVKGAKVVIDSNSGRSKGYGF 240

Query: 241 VRFGDENERTRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAV 300
           VRF DENERTRAM EMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGH NG+AV
Sbjct: 241 VRFSDENERTRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHANGIAV 300

Query: 301 QGSQSDSESNNTTIFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGCGFVQFANRKNA 360
           QGSQSD ESNNTTIFVGGLDSDVSDEDLK  FSKFGDV+SVKIPIGKGCGFVQFANRKNA
Sbjct: 301 QGSQSDGESNNTTIFVGGLDSDVSDEDLKQPFSKFGDVVSVKIPIGKGCGFVQFANRKNA 360

Query: 361 EDALQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYYSVPQH 420
           EDA+QGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYYSVPQH
Sbjct: 361 EDAIQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYYSVPQH 420

Query: 421 QDPNIHPTAAAAAAAVNGSS 425
           QD N+HPTAA+    VNGSS
Sbjct: 421 QDANMHPTAAS----VNGSS 435

[Close]

BLAST of IVF0005249 vs. NCBI nr
Match: XP_022986538.1 (polyadenylate-binding protein RBP47-like [Cucurbita maxima])

HSP 1 Score: 738 bits (1906), Expect = 8.57e-267
Identity = 382/439 (87.02%), Postives = 398/439 (90.66%), Query Frame = 0


Query: 1   MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMA 60
           MAQPSNGADLNPQAPHPH QWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYM 
Sbjct: 1   MAQPSNGADLNPQAPHPHQQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMT 60

Query: 61  YSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNNCF 120
           YSH PYQQQ      P  QQQQQ AQSQRPRRQGSTDEVKTLWIGDLQPWMDETYL+NCF
Sbjct: 61  YSHLPYQQQPP----PLQQQQQQQAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLHNCF 120

Query: 121 AHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEK--------------LPFRLNWATF 180
           AH GEV SVKVICNKQTGQSEGYGFVEF+SH TA+K              LPFRLNWATF
Sbjct: 121 AHIGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNTDLPFRLNWATF 180

Query: 181 SANDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFV 240
           S +DRRPDTGSDLSIFVGDLAADVTDAMLQETFSS+YTSVKGAKVVIDSNSGRSKGYGFV
Sbjct: 181 SGSDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGFV 240

Query: 241 RFGDENERTRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAVQ 300
           RFGDE+ERTRA+ EMNGIYCSSRPMRIGVATPKKASGYQQGY+SQALVLAGGH NGMAVQ
Sbjct: 241 RFGDESERTRAVTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQ 300

Query: 301 GSQSDSESNNTTIFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGCGFVQFANRKNAE 360
           GSQSD ESNNTTIFVGGLDSDVSDEDL+  FSKFG+++SVKIPIGKGCGFVQFANRKNAE
Sbjct: 301 GSQSDGESNNTTIFVGGLDSDVSDEDLRQPFSKFGEIVSVKIPIGKGCGFVQFANRKNAE 360

Query: 361 DALQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYYSVPQHQ 420
           DA+QGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQ YGGYGGYYS+PQHQ
Sbjct: 361 DAIQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQGYGGYGGYYSIPQHQ 420

Query: 421 DPNIHPTAAAAAAAVNGSS 425
           D N+H    AAAAAVNG+S
Sbjct: 421 DANMH----AAAAAVNGTS 431

[Close]

BLAST of IVF0005249 vs. NCBI nr
Match: XP_022943942.1 (polyadenylate-binding protein RBP47-like [Cucurbita moschata] >KAG6571157.1 Polyadenylate-binding protein RBP47, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 733 bits (1891), Expect = 1.53e-264
Identity = 381/439 (86.79%), Postives = 397/439 (90.43%), Query Frame = 0


Query: 1   MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMA 60
           MAQPSNGADLNPQAPHPH QWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYM 
Sbjct: 1   MAQPSNGADLNPQAPHPHQQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMT 60

Query: 61  YSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNNCF 120
           YSH PYQQQ      P  QQQQQ AQSQRPRRQGSTDEVKTLWIGDLQPWMDETYL+NCF
Sbjct: 61  YSHLPYQQQP-----PPLQQQQQQAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLHNCF 120

Query: 121 AHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEK--------------LPFRLNWATF 180
           AH GEV SVKVICNKQTGQSEGYGFVEF+SH TA+K              LPFRLNWATF
Sbjct: 121 AHIGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNTDLPFRLNWATF 180

Query: 181 SANDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFV 240
           S +DRRPDTGSDLSIFVGDLAADVTDAMLQETFSS+YTSVKGAKVVIDSNSGRSKGYGFV
Sbjct: 181 SGSDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGFV 240

Query: 241 RFGDENERTRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAVQ 300
           RFGDE+ERTRA+ EMNGIYCSSRPMRIGVATPKKASGYQQGY+SQALVLAGGH NGMAVQ
Sbjct: 241 RFGDESERTRAVTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQ 300

Query: 301 GSQSDSESNNTTIFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGCGFVQFANRKNAE 360
           GSQSD ESNNTTIFVGGLDSDVSDEDL+  FSKFG+++SVKIPIGKGCGFVQFANRKNAE
Sbjct: 301 GSQSDGESNNTTIFVGGLDSDVSDEDLRQPFSKFGEIVSVKIPIGKGCGFVQFANRKNAE 360

Query: 361 DALQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYYSVPQHQ 420
           DA+QGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQ YGGYGGYY +PQHQ
Sbjct: 361 DAIQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQGYGGYGGYY-IPQHQ 420

Query: 421 DPNIHPTAAAAAAAVNGSS 425
           D N+H    AAAAAVNG+S
Sbjct: 421 DANMH----AAAAAVNGTS 429

[Close]

BLAST of IVF0005249 vs. TAIR 10
Match: AT3G19130.1 (RNA-binding protein 47B )

HSP 1 Score: 471.1 bits (1211), Expect = 9.5e-133
Identity = 273/437 (62.47%), Postives = 316/437 (72.31%), Query Frame = 0


Query: 3   QPSNGADL----------NPQAPHPHHQWFQQQQQYQQQWM-AMQY-PAAAMAMMHQQQM 62
           Q +NG+D           N Q P P  QW QQQQQ QQQWM AMQY PAAAM MM QQQM
Sbjct: 2   QTTNGSDSTLATSGATPPNQQTPPPPQQW-QQQQQQQQQWMAAMQYPPAAAMMMMQQQQM 61

Query: 63  MMYPPQHYMAYSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPW 122
           +MYP Q Y+ Y+  PYQQ   Q  Q  S QQ QH Q +   R GS D+VKTLW+GDL  W
Sbjct: 62  LMYPHQ-YVPYNQGPYQQHHPQLHQYGSYQQHQHQQHKAIDR-GSGDDVKTLWVGDLLHW 121

Query: 123 MDETYLNNCFAHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKL------------- 182
           MDETYL++CF+HTGEVSSVKVI NK T QSEGYGFVEF S   AE++             
Sbjct: 122 MDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEEVLQNYSGSVMPNSD 181

Query: 183 -PFRLNWATFSANDRRP-DTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDS 242
            PFR+NWA+FS  ++R  + G DLS+FVGDL+ DVTD +L ETFS RY SVK AKVVIDS
Sbjct: 182 QPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDS 241

Query: 243 NSGRSKGYGFVRFGDENERTRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVL 302
           N+GRSKGYGFVRFGDENER+RA+ EMNG YCS+R MR+G+ATPK+A   QQ ++SQA++L
Sbjct: 242 NTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIATPKRAIANQQQHSSQAVIL 301

Query: 303 AGGH-PNGMAVQGSQSDSESNNTTIFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGC 362
           AGGH  NG    GSQSD ES N TIFVGG+D DV DEDL+  FS+FG+V+SVKIP+GKGC
Sbjct: 302 AGGHGSNGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPVGKGC 361

Query: 363 GFVQFANRKNAEDALQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYG 412
           GFVQFA+RK+AEDA++ LNGTVIGK TVRLSWGRS  NKQWRGDS  QWNGG   G  Y 
Sbjct: 362 GFVQFADRKSAEDAIESLNGTVIGKNTVRLSWGRSP-NKQWRGDSGQQWNGGYSRGHGYN 421

[Close]

BLAST of IVF0005249 vs. TAIR 10
Match: AT1G49600.1 (RNA-binding protein 47A )

HSP 1 Score: 468.8 bits (1205), Expect = 4.7e-132
Identity = 274/423 (64.78%), Postives = 311/423 (73.52%), Query Frame = 0


Query: 13  QAPHPHHQWFQQQQQYQQQWMA--MQYPAAAMAMMHQQQMMMYPPQHYMAYSHHPYQQQQ 72
           Q+  P  Q  QQQ Q QQQWMA   QYPAAAMAMM QQQMMMYP   Y  Y+   YQQ  
Sbjct: 29  QSTPPPQQQQQQQWQQQQQWMAAMQQYPAAAMAMMQQQQMMMYPHPQYAPYNQAAYQQHP 88

Query: 73  QQQQQPSSQQQQQHAQSQRPRRQGS-TDEVKTLWIGDLQPWMDETYLNNCFAHTGEVSSV 132
           Q Q     QQQQQH QSQ+  R GS  D+VKTLW+GDL  WMDETYL+ CF+HT EVSSV
Sbjct: 89  QFQYAAYQQQQQQHHQSQQQPRGGSGGDDVKTLWVGDLLHWMDETYLHTCFSHTNEVSSV 148

Query: 133 KVICNKQTGQSEGYGFVEFFSHTTAEKL--------------PFRLNWATFSANDRR-PD 192
           KVI NKQT QSEGYGFVEF S + AE+               PFRLNWA+FS  ++R  +
Sbjct: 149 KVIRNKQTCQSEGYGFVEFLSRSAAEEALQSFSGVTMPNAEQPFRLNWASFSTGEKRASE 208

Query: 193 TGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENER 252
            G DLSIFVGDLA DV+DA+L ETF+ RY SVKGAKVVIDSN+GRSKGYGFVRFGDENER
Sbjct: 209 NGPDLSIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENER 268

Query: 253 TRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAVQGSQSDSES 312
           +RAM EMNG +CSSR MR+G+ATPK+A+ Y Q   SQAL LAGGH       GS SD ES
Sbjct: 269 SRAMTEMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQALTLAGGHGG----NGSMSDGES 328

Query: 313 NNTTIFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGCGFVQFANRKNAEDALQGLNG 372
           NN+TIFVGGLD+DV++EDL   FS FG+V+SVKIP+GKGCGFVQFANR++AE+A+  LNG
Sbjct: 329 NNSTIFVGGLDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFVQFANRQSAEEAIGNLNG 388

Query: 373 TVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYYSVPQHQDPNIHPTA 418
           TVIGK TVRLSWGRS  NKQWR DS NQWNGG   GQ Y    GY     +QD N++ TA
Sbjct: 389 TVIGKNTVRLSWGRSP-NKQWRSDSGNQWNGGYSRGQGYN--NGY----ANQDSNMYATA 440

[Close]

BLAST of IVF0005249 vs. TAIR 10
Match: AT1G47500.1 (RNA-binding protein 47C' )

HSP 1 Score: 367.9 bits (943), Expect = 1.1e-101
Identity = 228/428 (53.27%), Postives = 273/428 (63.79%), Query Frame = 0


Query: 6   NGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMAYSHHP 65
           N    +P  P PH             W  M+YP   M        MMY P   M +S  P
Sbjct: 39  NQPKTSPTPPPPH-------------W--MRYPPVLM------PQMMYAPPPPMPFS--P 98

Query: 66  YQQQQQQQQQPSSQQQQQHAQSQRPRRQGS-TDEVKTLWIGDLQPWMDETYLNNCF--AH 125
           Y Q               H QS+  + Q +   E KT+W+GDLQ WMDE YLN+ F  A 
Sbjct: 99  YHQY--------PNHHHFHHQSRGNKHQNAFNGENKTIWVGDLQNWMDEAYLNSAFTSAE 158

Query: 126 TGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKL--------------PFRLNWATFSA 185
             E+ S+KVI NK  G SEGYGFVEF SH  A+K+              PFRLNWA+FS 
Sbjct: 159 EREIVSLKVIRNKHNGSSEGYGFVEFESHDVADKVLQEFNGAPMPNTDQPFRLNWASFST 218

Query: 186 NDRR-PDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVR 245
            ++R  + G DLSIFVGDLA DV+DA+L ETFS +Y SVK AKVV+D+N+GRSKGYGFVR
Sbjct: 219 GEKRLENNGPDLSIFVGDLAPDVSDALLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVR 278

Query: 246 FGDENERTRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGH-PNGMAVQ 305
           FGDENERT+AM EMNG+ CSSR MRIG ATP+K +GYQQ          GG+ P+G    
Sbjct: 279 FGDENERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQQ---------QGGYMPSGAF-- 338

Query: 306 GSQSDSESNNTTIFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGCGFVQFANRKNAE 365
            ++S+ ++ NTTIFVGGLDS V+DEDLK  FS+FG+++SVKIP+GKGCGFVQF NR NAE
Sbjct: 339 -TRSEGDTINTTIFVGGLDSSVTDEDLKQPFSEFGEIVSVKIPVGKGCGFVQFVNRPNAE 398

Query: 366 DALQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYYSVPQHQ 415
           +AL+ LNGTVIGKQTVRLSWGR+  NKQ R    NQW    YGGQ Y GYG  Y VPQ  
Sbjct: 399 EALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQWVDPYYGGQFYNGYG--YMVPQ-P 420

[Close]

BLAST of IVF0005249 vs. TAIR 10
Match: AT1G47490.1 (RNA-binding protein 47C )

HSP 1 Score: 357.5 bits (916), Expect = 1.5e-98
Identity = 224/433 (51.73%), Postives = 275/433 (63.51%), Query Frame = 0


Query: 9   DLNPQAPHPHHQWFQQQQQYQQQ--------WMAMQYPAAAMAMMHQQQMMMYPPQHYMA 68
           D  P  P P  Q   ++++ Q +        W  M+YP   + + HQ   MMY P  +  
Sbjct: 20  DNQPPPPPPPPQQPAKEEENQPKTSPTPPPHW--MRYPPTVI-IPHQ---MMYAPPPFPP 79

Query: 69  YSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGS-TDEVKTLWIGDLQPWMDETYLNNC 128
           Y  +P                  H QS+  + Q +   E KT+W+GDL  WMDE YLN+ 
Sbjct: 80  YHQYP-------------NHHHLHHQSRGNKHQNAFNGENKTIWVGDLHHWMDEAYLNSS 139

Query: 129 FA--HTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKL--------------PFRLNW 188
           FA     E+ SVKVI NK  G SEGYGFVEF SH  A+K+              PFRLNW
Sbjct: 140 FASGDEREIVSVKVIRNKNNGLSEGYGFVEFESHDVADKVLREFNGTTMPNTDQPFRLNW 199

Query: 189 ATFSANDRR-PDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKG 248
           A+FS  ++R  + G DLSIFVGDL+ DV+D +L ETFS +Y SVK AKVV+D+N+GRSKG
Sbjct: 200 ASFSTGEKRLENNGPDLSIFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKG 259

Query: 249 YGFVRFGDENERTRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGH-PN 308
           YGFVRFGDENERT+AM EMNG+ CSSR MRIG ATP+K +GYQQ          GG+ PN
Sbjct: 260 YGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQQ---------QGGYMPN 319

Query: 309 GMAVQGSQSDSESNNTTIFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGCGFVQFAN 368
           G     ++ + +  NTTIFVGGLDS V+DEDLK  F++FG+++SVKIP+GKGCGFVQF N
Sbjct: 320 GTL---TRPEGDIMNTTIFVGGLDSSVTDEDLKQPFNEFGEIVSVKIPVGKGCGFVQFVN 379

Query: 369 RKNAEDALQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYYS 415
           R NAE+AL+ LNGTVIGKQTVRLSWGR+  NKQ R    NQW    YGGQ Y GYG  Y 
Sbjct: 380 RPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQWVDPYYGGQFYNGYG--YM 418

[Close]

BLAST of IVF0005249 vs. TAIR 10
Match: AT5G54900.1 (RNA-binding protein 45A )

HSP 1 Score: 322.8 bits (826), Expect = 4.2e-88
Identity = 194/364 (53.30%), Postives = 237/364 (65.11%), Query Frame = 0


Query: 67  QQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNNCFAHTGEV 126
           QQQQQQQ Q S+    QH      +  GS  +VK+LWIGDLQ WMDE Y+ + FA +GE 
Sbjct: 27  QQQQQQQMQLSAAPLGQHQYGIGSQNPGSASDVKSLWIGDLQQWMDENYIMSVFAQSGEA 86

Query: 127 SSVKVICNKQTGQSEGYGFVEFFSHTTAEKL--------------PFRLNWATFSANDRR 186
           +S KVI NK TGQSEGYGF+EF SH+ AE++               FRLNWA   A ++R
Sbjct: 87  TSAKVIRNKLTGQSEGYGFIEFVSHSVAERVLQTYNGAPMPSTEQTFRLNWAQAGAGEKR 146

Query: 187 PDT-GSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDE 246
             T G D +IFVGDLA +VTD ML +TF + Y SVKGAKVV+D  +GRSKGYGFVRF DE
Sbjct: 147 FQTEGPDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADE 206

Query: 247 NERTRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAVQGSQS- 306
           NE+ RAM EMNG YCS+RPMRIG A  K A   Q                    QG+ + 
Sbjct: 207 NEQMRAMTEMNGQYCSTRPMRIGPAANKNALPMQPAMYQN-------------TQGANAG 266

Query: 307 DSESNNTTIFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGCGFVQFANRKNAEDALQ 366
           D++ NNTTIFVGGLD++V+D++LK  F +FG+++ VKIP GK CGFVQ+AN+ +AE AL 
Sbjct: 267 DNDPNNTTIFVGGLDANVTDDELKSIFGQFGELLHVKIPPGKRCGFVQYANKASAEHALS 326

Query: 367 GLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGG---QSYGGYGGYYSVPQHQD 412
            LNGT +G Q++RLSWGRS  NKQ       QWNGG Y G   Q  GGY GY + P  QD
Sbjct: 327 VLNGTQLGGQSIRLSWGRSP-NKQ---SDQAQWNGGGYYGYPPQPQGGY-GYAAQPPTQD 372

The following BLAST results are available for this feature:

BLAST of IVF0005249 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0WW84	1.3e-131	62.47	Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana OX=3702 GN=RBP47B P...	[more]
F4I3B3	6.6e-131	64.78	Polyadenylate-binding protein RBP47A OS=Arabidopsis thaliana OX=3702 GN=RBP47A P...	[more]
Q9LEB3	6.6e-131	59.59	Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP4...	[more]
Q9SX80	1.6e-100	53.27	Polyadenylate-binding protein RBP47C' OS=Arabidopsis thaliana OX=3702 GN=RBP47C'...	[more]
Q9SX79	2.2e-97	51.73	Polyadenylate-binding protein RBP47C OS=Arabidopsis thaliana OX=3702 GN=RBP47C P...	[more]

BLAST of IVF0005249 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C9N4	4.6e-236	96.81	polyadenylate-binding protein RBP47 OS=Cucumis melo OX=3656 GN=LOC103498402 PE=4...	[more]
A0A6J1JGT7	2.0e-210	87.02	polyadenylate-binding protein RBP47-like OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A6J1FUF1	8.2e-209	86.79	polyadenylate-binding protein RBP47-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1D3C6	1.0e-206	86.56	polyadenylate-binding protein RBP47 OS=Momordica charantia OX=3673 GN=LOC1110172...	[more]
A0A6J1KYU5	4.7e-204	83.81	polyadenylate-binding protein RBP47-like OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]

BLAST of IVF0005249 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008459212.1	3.50e-300	96.81	PREDICTED: polyadenylate-binding protein RBP47 [Cucumis melo]	[more]
XP_004145357.2	1.16e-293	94.76	polyadenylate-binding protein RBP47 [Cucumis sativus] >KAE8651855.1 hypothetical...	[more]
XP_038901011.1	3.07e-277	90.68	polyadenylate-binding protein RBP47 [Benincasa hispida]	[more]
XP_022986538.1	8.57e-267	87.02	polyadenylate-binding protein RBP47-like [Cucurbita maxima]	[more]
XP_022943942.1	1.53e-264	86.79	polyadenylate-binding protein RBP47-like [Cucurbita moschata] >KAG6571157.1 Poly...	[more]

BLAST of IVF0005249 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G19130.1	9.5e-133	62.47	RNA-binding protein 47B	[more]
AT1G49600.1	4.7e-132	64.78	RNA-binding protein 47A	[more]
AT1G47500.1	1.1e-101	53.27	RNA-binding protein 47C'	[more]
AT1G47490.1	1.5e-98	51.73	RNA-binding protein 47C	[more]
AT5G54900.1	4.2e-88	53.30	RNA-binding protein 45A	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 298..365 e-value: 8.1E-23 score: 91.8 coord: 101..176 e-value: 1.9E-7 score: 40.7 coord: 180..254 e-value: 1.5E-18 score: 77.6
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 299..362 e-value: 1.1E-18 score: 66.9 coord: 181..251 e-value: 5.2E-15 score: 55.0 coord: 102..156 e-value: 5.2E-10 score: 39.0
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 100..166 score: 12.423892
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 297..369 score: 18.188618
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 179..258 score: 16.858295
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 279..404 e-value: 4.8E-28 score: 100.0
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 166..272 e-value: 6.8E-22 score: 79.9 coord: 56..165 e-value: 1.7E-22 score: 81.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..90
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR47640:SF9	POLYADENYLATE-BINDING PROTEIN RBP47B	coord: 19..417
None	No IPR available	PANTHER	PTHR47640	TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED	coord: 19..417
None	No IPR available	CDD	cd12344	RRM1_SECp43_like	coord: 101..167 e-value: 1.73683E-34 score: 121.216
None	No IPR available	CDD	cd12345	RRM2_SECp43_like	coord: 178..257 e-value: 2.46683E-47 score: 155.129
None	No IPR available	CDD	cd12346	RRM3_NGR1_NAM8_like	coord: 296..367 e-value: 1.15171E-35 score: 123.953
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 288..399
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 163..272
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 64..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0005249.1	IVF0005249.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005829	cytosol
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding