IVF0004965 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTACTTTTGATTTGAAAAAGTTAAAGGTTGACTTTGACTTGAATGGTCAAATGACCATATTGCCCTTAGCTAAGTTAGAACTTTGTGTTGGAGATTGGTTTGAGAAGTTTCACTTACTAGGCATTCAACTTGTTATCGCGTGGAGAGGTATGCATTGGATGTCTAGGTGGCACGCCTCCTTCTGGTCACAAGAAGTGGCTAGCGGGGCGGGACGTGATATTGGTAATTTGTTTACTAAACTAAAGGATACCTCTTTGTTCTCTAAGAATTATTTGACATCAAACTATCATTAATTAAGAATTAAGAAGTTACATGTACCAAAGACGATGTTCAAAATGAGTTTTGGACATTTTGAATTCTTGGGACATCATTTGGTTTGCTTAACACCCCACGCGCATTCGGCTTAGTGAATTGAATATTTCTCACCTAATAAATTTTGTAATTTTTTCTTTTAAATATTTGATTCAATTTCTAACTTTTACTTTTACTTAAATAATTAATAAACTCATTTTTTAAAAAAAAGAAGTAGAAAAAAATAAAATAAAGAAACCGAAGGATATAATTTGTAGTTACAGAGTTCATTGTCCACCAAAAACTGGATTTCTTCTCATCTTTTATCTCTCTAATTTGTTTTATTAATTGTGTGGATGTAGATAACATGCACTCTAATTATAACATTAATTATGAAACAAATTATTCGATTATCACATATATTTTATATATTTCTTACTTTTGTTTTATTTTATTATTAATTGTGCGTGAATGTGAAATGCTAACTTGTAGTTACAAAGAATCTGTTATAGGTTTTAAAAAATTCTCATACTTCCTCCTTATAATTATTTATGGTAAATGGATGTTAAATCTAACTTACAATTAGAATTGACACTCTTTTTAGGGAAACTTTCTAGTACTGCAGTTACCTACAATACTTCAAACCTCCCTATATATATGAAGTTTTTGATTATATCCTCTTTGCAACCAATGAACTTTAAAACCAAAACAAGTCATTGATATATTATTACATTATCATAGTTCTTTATCTTTTTCATTGGCAAAATGACTTCATCTTTAGCACTTGGATTCTCAATGTTCTTGTTGCTACCCATTAGCTTACATGCCACGGATGAATTGATCTCACTTTTACCAGAAACTACAGTCACTATTGTTAACGAAGTGGGTGGCCCTCTGTTGGGCATTCATTGTAGATCCAAGCAAGATGATCTAGGAGTTAATGTCGTATCGTCAGATAAAAGTTACTCATTTAACTTTAGACCAAATGTCTGGGGAACGACATTATTTTACTGCGTCTTCGAATGGGTTAAAGGTCAACCCCACTACTTCACAATTTATGACTTTAAAAGGGATGGAAAGACTTGTACTAATTGCAGATGGCTCGTTTATGCAAGTGGCCCATGTTTGCAACACTCTGAAACCTCTATTACTTGCTTTCCTTGGAACAAGAATGCTCCAGAGTTGAAATATTAG ATGTTTACTTTTGATTTGAAAAAGTTAAAGGTTGACTTTGACTTGAATGGTCAAATGACCATATTGCCCTTAGCTAAGTTAGAACTTTGTGTTGGAGATTGGTTTGAGAAGTTTCACTTACTAGGCATTCAACTTGTTATCGCGTGGAGAGGTATGCATTGGATGTCTAGGTGGCACGCCTCCTTCTGGTCACAAGAAGTGGCTAGCGGGGCGGGACGTGATATTGCACTTGGATTCTCAATGTTCTTGTTGCTACCCATTAGCTTACATGCCACGGATGAATTGATCTCACTTTTACCAGAAACTACAGTCACTATTGTTAACGAAGTGGGTGGCCCTCTGTTGGGCATTCATTGTAGATCCAAGCAAGATGATCTAGGAGTTAATGTCGTATCGTCAGATAAAAGTTACTCATTTAACTTTAGACCAAATGTCTGGGGAACGACATTATTTTACTGCGTCTTCGAATGGGTTAAAGGTCAACCCCACTACTTCACAATTTATGACTTTAAAAGGGATGGAAAGACTTGTACTAATTGCAGATGGCTCGTTTATGCAAGTGGCCCATGTTTGCAACACTCTGAAACCTCTATTACTTGCTTTCCTTGGAACAAGAATGCTCCAGAGTTGAAATATTAG ATGTTTACTTTTGATTTGAAAAAGTTAAAGGTTGACTTTGACTTGAATGGTCAAATGACCATATTGCCCTTAGCTAAGTTAGAACTTTGTGTTGGAGATTGGTTTGAGAAGTTTCACTTACTAGGCATTCAACTTGTTATCGCGTGGAGAGGTATGCATTGGATGTCTAGGTGGCACGCCTCCTTCTGGTCACAAGAAGTGGCTAGCGGGGCGGGACGTGATATTGCACTTGGATTCTCAATGTTCTTGTTGCTACCCATTAGCTTACATGCCACGGATGAATTGATCTCACTTTTACCAGAAACTACAGTCACTATTGTTAACGAAGTGGGTGGCCCTCTGTTGGGCATTCATTGTAGATCCAAGCAAGATGATCTAGGAGTTAATGTCGTATCGTCAGATAAAAGTTACTCATTTAACTTTAGACCAAATGTCTGGGGAACGACATTATTTTACTGCGTCTTCGAATGGGTTAAAGGTCAACCCCACTACTTCACAATTTATGACTTTAAAAGGGATGGAAAGACTTGTACTAATTGCAGATGGCTCGTTTATGCAAGTGGCCCATGTTTGCAACACTCTGAAACCTCTATTACTTGCTTTCCTTGGAACAAGAATGCTCCAGAGTTGAAATATTAG MFTFDLKKLKVDFDLNGQMTILPLAKLELCVGDWFEKFHLLGIQLVIAWRGMHWMSRWHASFWSQEVASGAGRDIALGFSMFLLLPISLHATDELISLLPETTVTIVNEVGGPLLGIHCRSKQDDLGVNVVSSDKSYSFNFRPNVWGTTLFYCVFEWVKGQPHYFTIYDFKRDGKTCTNCRWLVYASGPCLQHSETSITCFPWNKNAPELKY Homology
BLAST of IVF0004965 vs. ExPASy Swiss-Prot
Match: O23020 (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 1.8e-23 Identity = 49/102 (48.04%), Postives = 65/102 (63.73%), Query Frame = 0
BLAST of IVF0004965 vs. ExPASy Swiss-Prot
Match: Q9FMQ4 (S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 2.2e-18 Identity = 52/135 (38.52%), Postives = 74/135 (54.81%), Query Frame = 0
BLAST of IVF0004965 vs. ExPASy Swiss-Prot
Match: F4JZG1 (S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 2.7e-16 Identity = 47/114 (41.23%), Postives = 65/114 (57.02%), Query Frame = 0
BLAST of IVF0004965 vs. ExPASy Swiss-Prot
Match: Q3E9W6 (S-protein homolog 20 OS=Arabidopsis thaliana OX=3702 GN=SPH20 PE=2 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.1e-14 Identity = 41/104 (39.42%), Postives = 57/104 (54.81%), Query Frame = 0
BLAST of IVF0004965 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 2.5e-14 Identity = 44/112 (39.29%), Postives = 61/112 (54.46%), Query Frame = 0
BLAST of IVF0004965 vs. ExPASy TrEMBL
Match: B0F818 (S-protein homolog OS=Cucumis melo OX=3656 PE=3 SV=1) HSP 1 Score: 454.1 bits (1167), Expect = 3.1e-124 Identity = 211/212 (99.53%), Postives = 211/212 (99.53%), Query Frame = 0
BLAST of IVF0004965 vs. ExPASy TrEMBL
Match: B0F817 (S-protein homolog OS=Cucumis melo OX=3656 PE=3 SV=1) HSP 1 Score: 298.9 bits (764), Expect = 1.7e-77 Identity = 137/138 (99.28%), Postives = 138/138 (100.00%), Query Frame = 0
BLAST of IVF0004965 vs. ExPASy TrEMBL
Match: A0A5A7TXE8 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold157G00180 PE=3 SV=1) HSP 1 Score: 275.0 bits (702), Expect = 2.6e-70 Identity = 123/132 (93.18%), Postives = 127/132 (96.21%), Query Frame = 0
BLAST of IVF0004965 vs. ExPASy TrEMBL
Match: A0A5A7TT98 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold384G00010 PE=3 SV=1) HSP 1 Score: 265.0 bits (676), Expect = 2.7e-67 Identity = 118/120 (98.33%), Postives = 120/120 (100.00%), Query Frame = 0
BLAST of IVF0004965 vs. ExPASy TrEMBL
Match: A0A5A7TR91 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold157G00040 PE=3 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 6.7e-34 Identity = 73/81 (90.12%), Postives = 76/81 (93.83%), Query Frame = 0
BLAST of IVF0004965 vs. NCBI nr
Match: ABY56092.1 (self-incompatibility protein 2 [Cucumis melo]) HSP 1 Score: 449 bits (1156), Expect = 9.82e-160 Identity = 211/212 (99.53%), Postives = 211/212 (99.53%), Query Frame = 0
BLAST of IVF0004965 vs. NCBI nr
Match: ABY56091.1 (self-incompatibility protein 1 [Cucumis melo] >ABY56095.1 self-incompatibility protein 3 [Cucumis melo] >ABY56096.1 self-incompatibility protein 4 [Cucumis melo]) HSP 1 Score: 295 bits (756), Expect = 7.95e-100 Identity = 137/139 (98.56%), Postives = 138/139 (99.28%), Query Frame = 0
BLAST of IVF0004965 vs. NCBI nr
Match: KAA0046095.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 271 bits (692), Expect = 3.18e-90 Identity = 123/132 (93.18%), Postives = 127/132 (96.21%), Query Frame = 0
BLAST of IVF0004965 vs. NCBI nr
Match: KAA0046284.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 261 bits (667), Expect = 1.41e-85 Identity = 118/120 (98.33%), Postives = 120/120 (100.00%), Query Frame = 0
BLAST of IVF0004965 vs. NCBI nr
Match: KAA0046083.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 152 bits (384), Expect = 9.12e-43 Identity = 73/81 (90.12%), Postives = 76/81 (93.83%), Query Frame = 0
BLAST of IVF0004965 vs. TAIR 10
Match: AT1G04645.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 110.9 bits (276), Expect = 1.2e-24 Identity = 49/102 (48.04%), Postives = 65/102 (63.73%), Query Frame = 0
BLAST of IVF0004965 vs. TAIR 10
Match: AT3G16970.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 96.7 bits (239), Expect = 2.4e-20 Identity = 48/115 (41.74%), Postives = 68/115 (59.13%), Query Frame = 0
BLAST of IVF0004965 vs. TAIR 10
Match: AT5G12060.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 94.0 bits (232), Expect = 1.6e-19 Identity = 52/135 (38.52%), Postives = 74/135 (54.81%), Query Frame = 0
BLAST of IVF0004965 vs. TAIR 10
Match: AT3G17080.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 89.4 bits (220), Expect = 3.9e-18 Identity = 43/110 (39.09%), Postives = 65/110 (59.09%), Query Frame = 0
BLAST of IVF0004965 vs. TAIR 10
Match: AT5G12070.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 87.0 bits (214), Expect = 1.9e-17 Identity = 47/114 (41.23%), Postives = 65/114 (57.02%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|