IVF0004840 (gene) Melon (IVF77) v1

Overview
NameIVF0004840
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReverse transcriptase domain-containing protein
Locationchr04: 23839624 .. 23840891 (+)
RNA-Seq ExpressionIVF0004840
SyntenyIVF0004840
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTCAAGTCGATTGGCGGACCGGCTCATCACCGTTCCACATCCGACTGGGGCACATCGCCGGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTATTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTCGCCCATATTTAGCCTTGGACAGAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAACCCGACTCGTTGACAGCGCCTCGTGGTGCGACAGGGTCCGAGCGCAACGGGGCTCTCACCCTCTCTGGCGCCCCCTTCCAGGGGACTTGTGCCCGGTCCGCCGCTGAGGACGCTTCTCCAGACTACAATTCGGACGTCGAGGACGCCCGATTCTCAAGCTGGGCTCTTCCCGGTTCGCTCGCCGTTACTAGGGGAATCCTTGTAAGTTTCTTTTCCTCCGCTTATTGATATGCTTAAACTCAGCGGGTAGTCCCGCCTGACCTGGGGTCGCGTCGAGAGCGTCGTCCTTTTAAGGGGCGGCGTTCGAAGGGTCGTGAAGGAGTCCGTGAAGTCGACGTCGAGGTCGAGACGCGTCACCGAGGTTGAATCAACCACCGTAGTGTCGCGACGACGAGCATCGAGGACTCGAATTTAAGCCATCCGCACGACGGTGCGTACGGGAGGCCAGTGTGTGTCCCTGCCTTCACAACGACCCCGCATGGGGAGAGTTGTGTGGTGGGGGCAGCGATGCGTGACGCCCAGGCAGACGTGCCCTCGGCCAGAAGGCTCCGGGCGCAACTTGCGTTCAAAGACTCGGTGGTTCGCGGGATCCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCGTTGTTAGTAATACGACTAGAATGCTCCATCCCCCGCAGGCCGAGGCCGGGGCAGGGGACAGGCGAATTCATTTCAAGTTCCTTGGCGCGACCTGCGCCGGGGTTTTGTTTAAACGCGTTGGAAGGGGAGGAGGCAGGCAAAGAGCATGCTTCCCCCCGCCCCTAACGCGAACAATTTGTTTTTAAACGCGTTCGCGGGTCGTTTGATGTTTAGGCATCGACAATGATCCTTCCGCAGGTTCACCTACGGAAACCTTGTTACGACTTCTCCTTCCTCTAAATGATAAGGTTCAGTGGACTTCTCGCGACGTCGCGGGCAGCGAACCGCCCACGTCGCCGCGATCCGAACACTTCACCGGACCATTCAATCGGTAG

mRNA sequence

ATGCCTCAAGTCGATTGGCGGACCGGCTCATCACCGTTCCACATCCGACTGGGGCACATCGCCGGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTATTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTCGCCCATATTTAGCCTTGGACAGAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAACCCGACTCGTTGACAGCGCCTCGTGGTGCGACAGGGTCCGAGCGCAACGGGGCTCTCACCCTCTCTGGCGCCCCCTTCCAGGGGACTTGTGCCCGGTCCGCCGCTGAGGACGCTTCTCCAGACTACAATTCGGACGTCGAGGACGCCCGATTCTCAAGCTGGGCTCTTCCCGGTTCGCTCGCCGTTACTAGGGGAATCCTTCGTCGTCCTTTTAAGGGGCGGCGTTCGAAGGGTCGTGAAGGAGTCCGTGAAGTCGACGTCGAGGACTCGAATTTAAGCCATCCGCACGACGGTGCGTACGGGAGGCCAGTGTGTGTCCCTGCCTTCACAACGACCCCGCATGGGGAGAGTTGTGTGGTGGGGGCAGCGATGCGTGACGCCCAGGCAGACGTGCCCTCGGCCAGAAGGCTCCGGGCGCAACTTGCGTTCAAAGACTCGGTGGTTCGCGGGATCCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCGTTGGGAGGAGGCAGGCAAAGAGCATGCTTCCCCCCGCCCCTAACGCGAACAATTTGCATCGACAATGATCCTTCCGCAGGTTCACCTACGGAAACCTTGTTACGACTTCTCCTTCCTCTAAATGATAAGGTTCAGTGGACTTCTCGCGACGTCGCGGGCAGCGAACCGCCCACGTCGCCGCGATCCGAACACTTCACCGGACCATTCAATCGGTAG

Coding sequence (CDS)

ATGCCTCAAGTCGATTGGCGGACCGGCTCATCACCGTTCCACATCCGACTGGGGCACATCGCCGGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTATTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTCGCCCATATTTAGCCTTGGACAGAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAACCCGACTCGTTGACAGCGCCTCGTGGTGCGACAGGGTCCGAGCGCAACGGGGCTCTCACCCTCTCTGGCGCCCCCTTCCAGGGGACTTGTGCCCGGTCCGCCGCTGAGGACGCTTCTCCAGACTACAATTCGGACGTCGAGGACGCCCGATTCTCAAGCTGGGCTCTTCCCGGTTCGCTCGCCGTTACTAGGGGAATCCTTCGTCGTCCTTTTAAGGGGCGGCGTTCGAAGGGTCGTGAAGGAGTCCGTGAAGTCGACGTCGAGGACTCGAATTTAAGCCATCCGCACGACGGTGCGTACGGGAGGCCAGTGTGTGTCCCTGCCTTCACAACGACCCCGCATGGGGAGAGTTGTGTGGTGGGGGCAGCGATGCGTGACGCCCAGGCAGACGTGCCCTCGGCCAGAAGGCTCCGGGCGCAACTTGCGTTCAAAGACTCGGTGGTTCGCGGGATCCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCGTTGGGAGGAGGCAGGCAAAGAGCATGCTTCCCCCCGCCCCTAACGCGAACAATTTGCATCGACAATGATCCTTCCGCAGGTTCACCTACGGAAACCTTGTTACGACTTCTCCTTCCTCTAAATGATAAGGTTCAGTGGACTTCTCGCGACGTCGCGGGCAGCGAACCGCCCACGTCGCCGCGATCCGAACACTTCACCGGACCATTCAATCGGTAG

Protein sequence

MPQVDWRTGSSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAPFQGTCARSAAEDASPDYNSDVEDARFSSWALPGSLAVTRGILRRPFKGRRSKGREGVREVDVEDSNLSHPHDGAYGRPVCVPAFTTTPHGESCVVGAAMRDAQADVPSARRLRAQLAFKDSVVRGILQFTPSIAFRYVLHRCESRDIRCRESLGGGRQRACFPPPLTRTICIDNDPSAGSPTETLLRLLLPLNDKVQWTSRDVAGSEPPTSPRSEHFTGPFNR
Homology
BLAST of IVF0004840 vs. ExPASy Swiss-Prot
Match: P0C5Q0 (Putative uncharacterized protein YLR154W-F OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=YLR154W-F PE=5 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 1.2e-04
Identity = 22/32 (68.75%), Postives = 27/32 (84.38%), Query Frame = 0

Query: 265 PLTRTICIDNDPSAGSPTETLLRLLLPLNDKV 297
           P ++ +   NDPSAGSPTETLLRLL+PLND+V
Sbjct: 9   PFSKLLNFFNDPSAGSPTETLLRLLVPLNDQV 40

BLAST of IVF0004840 vs. ExPASy TrEMBL
Match: A0A6N2KB50 (Uncharacterized protein (Fragment) OS=Salix viminalis OX=40686 GN=SVIM_LOCUS20822 PE=4 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 1.2e-111
Identity = 240/392 (61.22%), Postives = 246/392 (62.76%), Query Frame = 0

Query: 11   SPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWG 70
            SPFHIR G IAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLG+NLPPDWG
Sbjct: 829  SPFHIRPGRIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGRNLPPDWG 888

Query: 71   CIPKQPDSLTAPRGATGSERNGALTLSGAPFQGTCARSAAEDASPDYNSDVEDARFSSWA 130
            CIPKQPDS TAPRGA GS  +GALTLSGAPFQGT A SAAEDASPDYNS+   ARFSSWA
Sbjct: 889  CIPKQPDSQTAPRGAAGSSHDGALTLSGAPFQGTWAWSAAEDASPDYNSNAAGARFSSWA 948

Query: 131  LPGSLAVTRGILRRPFKGRRSKGRE----GVREVDVEDSNLS------------------ 190
             PGSLAVTRGIL R   GR     E    GVREV    S  +                  
Sbjct: 949  FPGSLAVTRGILSRLTWGRNESILESQCSGVREVPGATSTRTTVSEGLSTTACRGNRRRG 1008

Query: 191  ---HPHDGAYGRPVCVPAFTTTPHGESCVVGAAMRDAQADVPSARRLRAQLAFKDSVVRG 250
                P  G   R   +      P G    VGA MRD QADVPS RR RAQLAFKDS+V G
Sbjct: 1009 LDFRPTTGGSARETSIRPRPREPRG----VGATMRDTQADVPSTRRPRAQLAFKDSMVHG 1068

Query: 251  ILQFTPSIAFRYVLHRCESRDIRCRE---------------------------------S 310
            ILQFTPSIAFRYVLHRCESRDIRCRE                                 S
Sbjct: 1069 ILQFTPSIAFRYVLHRCESRDIRCRESFRLSQKEGAPPTPRLRGRAPSTQFPWRFSRRGS 1128

Query: 311  LGGGRQRACFPP----------PLTRTIC-----------IDNDPSAGSPTETLLRLLLP 324
            L     R C PP          P     C            DNDPSAGSPTETLLRLLLP
Sbjct: 1129 LASRVGRRCVPPRHAWTRGAGAPEPSLSCHGFAGRSAGAGFDNDPSAGSPTETLLRLLLP 1188

BLAST of IVF0004840 vs. ExPASy TrEMBL
Match: A0A6N2MPB6 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS385919 PE=4 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 2.7e-111
Identity = 240/392 (61.22%), Postives = 246/392 (62.76%), Query Frame = 0

Query: 11   SPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWG 70
            SPFHIR G IAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLG+NLPPDWG
Sbjct: 951  SPFHIRPGRIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGRNLPPDWG 1010

Query: 71   CIPKQPDSLTAPRGATGSERNGALTLSGAPFQGTCARSAAEDASPDYNSDVEDARFSSWA 130
            CIPKQPDS TAPRGA GS  +GALTLSGAPFQGT A SAAEDASPDYNS+   ARFSSWA
Sbjct: 1011 CIPKQPDSQTAPRGAAGSSHDGALTLSGAPFQGTWAWSAAEDASPDYNSNAAGARFSSWA 1070

Query: 131  LPGSLAVTRGILRRPFKGRRSKGRE----GVREVDVEDSNLS------------------ 190
             PGSLAVTRGIL R   GR     E    GVREV    S  +                  
Sbjct: 1071 FPGSLAVTRGILSRLTWGRNESILESQCSGVREVPGATSTRTTVSEGLSTTACRGNRRRG 1130

Query: 191  ---HPHDGAYGRPVCVPAFTTTPHGESCVVGAAMRDAQADVPSARRLRAQLAFKDSVVRG 250
                P  G   R   +      P G    VGA MRD QADVPS RR RAQLAFKDS+V G
Sbjct: 1131 LDFRPTTGGSARETSIRPRPREPRG----VGATMRDTQADVPSTRRPRAQLAFKDSMVHG 1190

Query: 251  ILQFTPSIAFRYVLHRCESRDIRCRES--------------LGGGRQRACFP-------- 310
            ILQFTPSIAFRYVLHRCESRDIRCRES              L G      FP        
Sbjct: 1191 ILQFTPSIAFRYVLHRCESRDIRCRESFRLSQKEGAPPTPRLRGRAPSTQFPWRFSRRGS 1250

Query: 311  ---------------------PPLTRTIC-----------IDNDPSAGSPTETLLRLLLP 324
                                 PP     C            DNDPSAGSPTETLLRLLLP
Sbjct: 1251 LASRVGADASLHGTRGHEGRVPPEPSLSCHGFAGRSAGAGFDNDPSAGSPTETLLRLLLP 1310

BLAST of IVF0004840 vs. ExPASy TrEMBL
Match: A0A6N2NG36 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS504798 PE=4 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 1.0e-110
Identity = 234/368 (63.59%), Postives = 242/368 (65.76%), Query Frame = 0

Query: 11   SPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWG 70
            SPFHIR G IAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLG+NLPPDWG
Sbjct: 842  SPFHIRPGRIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGRNLPPDWG 901

Query: 71   CIPKQPDSLTAPRGATGSERNGALTLSGAPFQGTCARSAAEDASPDYNSDVEDARFSSWA 130
            CIPKQPDS TAPRGA GS  +GALTLSGAPFQGT A SAAEDASPDYNS+   ARFSSWA
Sbjct: 902  CIPKQPDSQTAPRGAAGSSHDGALTLSGAPFQGTWAWSAAEDASPDYNSNAAGARFSSWA 961

Query: 131  LPGSLAVTRGILRRPFKGRRSKGREGV----------REVDVEDSNLSHPHDGAYGRPVC 190
             PGSLAVTRGIL       R+   EG+          R +D   +      D    RP  
Sbjct: 962  FPGSLAVTRGILVPGATSTRTTVSEGLSTTACRGNRRRGLDFRPTTGERAGDQYPPRP-- 1021

Query: 191  VPAFTTTPHGESCVVGAAMRDAQADVPSARRLRAQLAFKDSVVRGILQFTPSIAFRYVLH 250
                   P G    VGA MRD QADVPS RR RAQLAFKDS+V GILQFTPSIAFRYVLH
Sbjct: 1022 -----REPRG----VGATMRDTQADVPSTRRPRAQLAFKDSMVHGILQFTPSIAFRYVLH 1081

Query: 251  RCESRDIRCRESL----------------------------GGGRQRACF---------- 310
            RCESRDIRCRES                              G R RA            
Sbjct: 1082 RCESRDIRCRESFRLSQKEGAPPTPRLRGRAPSTQFPWRFSRGVRWRAVSGADASLHGTR 1141

Query: 311  -------PPPLTRTICIDNDPSAGSPTETLLRLLLPLNDKVQWTSRDVAGSEPPTSPRSE 324
                   P P       DNDPSAGSPTETLLRLLLPLNDKVQWTSRDVA  EPPTSPRSE
Sbjct: 1142 GHEGRVPPSPACHATGFDNDPSAGSPTETLLRLLLPLNDKVQWTSRDVASGEPPTSPRSE 1198

BLAST of IVF0004840 vs. ExPASy TrEMBL
Match: A0A6N2NHA9 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS498692 PE=4 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 6.7e-110
Identity = 237/392 (60.46%), Postives = 243/392 (61.99%), Query Frame = 0

Query: 11   SPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWG 70
            SPFHIR G IAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLG+NLPPDWG
Sbjct: 921  SPFHIRPGRIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGRNLPPDWG 980

Query: 71   CIPKQPDSLTAPRGATGSERNGALTLSGAPFQGTCARSAAEDASPDYNSDVEDARFSSWA 130
            CIPKQPDS TAPRGA GS  +GALTLSGAPFQGT A SAAEDASPDYNS+   ARFSSWA
Sbjct: 981  CIPKQPDSQTAPRGAAGSSHDGALTLSGAPFQGTWAWSAAEDASPDYNSNAAGARFSSWA 1040

Query: 131  LPGSLAVTRGILRRPFKGRRSKGRE----GVREVDVEDSNLS------------------ 190
             PGSLAVTRGIL R   GR     E    GVREV    S  +                  
Sbjct: 1041 FPGSLAVTRGILSRLTWGRNESILESQCSGVREVPGATSTRTTVSEGLSTTACRGNRRRG 1100

Query: 191  ---HPHDGAYGRPVCVPAFTTTPHGESCVVGAAMRDAQADVPSARRLRAQLAFKDSVVRG 250
                P  G   R   +      P G    VGA MRD QADVPS RR RAQLAFKDS+V G
Sbjct: 1101 LDFRPTTGGSARETSIRPRPREPRG----VGATMRDTQADVPSTRRPRAQLAFKDSMVHG 1160

Query: 251  ILQFTPSIAFRYVLHRCESRDIRCRE---------------------------------- 310
            ILQFTPSIAFRYVLHRCESRDIRC                                    
Sbjct: 1161 ILQFTPSIAFRYVLHRCESRDIRCESRSDYHKKKARPRHRGYEGGLLVLNFLGASRAGVR 1220

Query: 311  ---------SLGGGRQRACFPPPLTRTIC-----------IDNDPSAGSPTETLLRLLLP 324
                     SL G R      PP     C            DNDPSAGSPTETLLRLLLP
Sbjct: 1221 WRAVSGADASLHGTRGHEGRVPPEPSLSCHGFAGRSAGAGFDNDPSAGSPTETLLRLLLP 1280

BLAST of IVF0004840 vs. ExPASy TrEMBL
Match: A0A6N2MQW9 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS385895 PE=4 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 6.7e-110
Identity = 237/392 (60.46%), Postives = 243/392 (61.99%), Query Frame = 0

Query: 11   SPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWG 70
            SPFHIR G IAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLG+NLPPDWG
Sbjct: 823  SPFHIRPGRIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGRNLPPDWG 882

Query: 71   CIPKQPDSLTAPRGATGSERNGALTLSGAPFQGTCARSAAEDASPDYNSDVEDARFSSWA 130
            CIPKQPDS TAPRGA GS  +GALTLSGAPFQGT A SAAEDASPDYNS+   ARFSSWA
Sbjct: 883  CIPKQPDSQTAPRGAAGSSHDGALTLSGAPFQGTWAWSAAEDASPDYNSNAAGARFSSWA 942

Query: 131  LPGSLAVTRGILRRPFKGRRSKGRE----GVREVDVEDSNLS------------------ 190
             PGSLAVTRGIL R   GR     E    GVREV    S  +                  
Sbjct: 943  FPGSLAVTRGILSRLTWGRNESILESQCSGVREVPGATSTRTTVSEGLSTTACRGNRRRG 1002

Query: 191  ---HPHDGAYGRPVCVPAFTTTPHGESCVVGAAMRDAQADVPSARRLRAQLAFKDSVVRG 250
                P  G   R   +      P G    VGA MRD QADVPS RR RAQLAFKDS+V G
Sbjct: 1003 LDFRPTTGGSARETSIRPRPREPRG----VGATMRDTQADVPSTRRPRAQLAFKDSMVHG 1062

Query: 251  ILQFTPSIAFRYVLHRCESRDIRCRE---------------------------------- 310
            ILQFTPSIAFRYVLHRCESRDIRC                                    
Sbjct: 1063 ILQFTPSIAFRYVLHRCESRDIRCESRSDYHKKKARPRHRGYEGGLLVLNFLGASRAGVR 1122

Query: 311  ---------SLGGGRQRACFPPPLTRTIC-----------IDNDPSAGSPTETLLRLLLP 324
                     SL G R      PP     C            DNDPSAGSPTETLLRLLLP
Sbjct: 1123 WRAVSGADASLHGTRGHEGRVPPEPSLSCHGFAGRSAGAGFDNDPSAGSPTETLLRLLLP 1182

BLAST of IVF0004840 vs. NCBI nr
Match: KEH17348.1 (hypothetical protein MTR_0021s0160 [Medicago truncatula])

HSP 1 Score: 390 bits (1003), Expect = 4.60e-130
Identity = 237/378 (62.70%), Postives = 250/378 (66.14%), Query Frame = 0

Query: 12  PFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGC 71
           PF IR G IAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSP+FSLG++LPPD GC
Sbjct: 137 PFRIRPGRIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPVFSLGRSLPPDLGC 196

Query: 72  IPKQPDSLTAPRGATGSERNGALTLSGAPFQGTCARSAAEDASPDYNSDVEDARFSSWAL 131
           IPKQPDSLTAPRGATGS  +GALTL GAPFQGT ARS AEDASPDYNSD   ARFSSWA+
Sbjct: 197 IPKQPDSLTAPRGATGSGPDGALTLPGAPFQGTWARSVAEDASPDYNSDGTAARFSSWAV 256

Query: 132 PGSLAVTRGILR--RPFKGRRSKGRE----GVREVDVEDSNLSHPHDGAYGRPV-CV--- 191
           PGSLAVTRGILR   P  G RSK R     G  E  +  +   H  D A    + CV   
Sbjct: 257 PGSLAVTRGILRVVPPDLGSRSKRRALRSMGRFEAMMPSTRRMHCIDKARTPTMRCVRRG 316

Query: 192 -PAFTTTPHGE-------------SCVVGAAM-RDAQADVPSARRLRAQLAFKDSVVRGI 251
            PA  ++ H                 VVG+   RDAQA VPSA   RAQLAFKDS+VRGI
Sbjct: 317 TPAARSSAHRPLQDEGPYAASQFPKRVVGSVFWRDAQAGVPSAEWPRAQLAFKDSMVRGI 376

Query: 252 LQFTPSIAFRYVLHRCESRDIRCRESLG---GGRQRACFPPP------LTR--------- 311
           LQFTP IAFRYVLHRCESRDIRCRES G      Q  C   P      L R         
Sbjct: 377 LQFTPGIAFRYVLHRCESRDIRCRESCGLNIFATQAQCSLTPSAPWVLLPRAPAPRSGGG 436

Query: 312 -------------------TICI----DNDPSAGSPTETLLRLLLPLNDKVQWTSRDVAG 323
                              T+C     DNDPSAGSPTETLLRLLLPLNDKVQWTSRDV G
Sbjct: 437 RGIGRTTNNAIVGGLDDASTVCFGQGHDNDPSAGSPTETLLRLLLPLNDKVQWTSRDVGG 496

BLAST of IVF0004840 vs. NCBI nr
Match: KAF7112640.1 (hypothetical protein RHSIM_RhsimUnG0208700 [Rhododendron simsii] >KAF7112643.1 hypothetical protein RHSIM_RhsimUnG0208200 [Rhododendron simsii] >KAF7144217.1 hypothetical protein RHSIM_Rhsim05G0123700 [Rhododendron simsii])

HSP 1 Score: 376 bits (965), Expect = 9.41e-126
Identity = 211/342 (61.70%), Postives = 222/342 (64.91%), Query Frame = 0

Query: 2   PQVDWRTGSSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSL 61
           P+     G SPFHIR G IAGPH LPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSL
Sbjct: 141 PESIGGPGFSPFHIRPGRIAGPHSLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSL 200

Query: 62  GQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAPFQGTCARSAAEDASPDYNSDV 121
           G+NLPPDWGCIPKQPDS TAPRGATGSE +GALTLSGAPFQGT ARS AEDASPDYNS+ 
Sbjct: 201 GRNLPPDWGCIPKQPDSPTAPRGATGSEHDGALTLSGAPFQGTWARSVAEDASPDYNSNN 260

Query: 122 EDARFSSWALPGSLAVTRGILRRPFKGRRSKGREGVREVDVEDSNLSHPHDGAYGRPVCV 181
           E ARFSSWA+PGSLAVTRGIL                                       
Sbjct: 261 EIARFSSWAIPGSLAVTRGIL--------------------------------------- 320

Query: 182 PAFTTTPHGESCVVGAAMRDAQADVPSARRLRAQLAFKDSVVRGILQFTPSIAFRYVLHR 241
                                           AQLAFKDS+V GILQFTPSIAFRYVLHR
Sbjct: 321 --------------------------------AQLAFKDSMVHGILQFTPSIAFRYVLHR 380

Query: 242 CESRDIRCRESLG--------------GGRQRAC------FPPPLTRTICIDNDPSAGSP 301
           C+SRDIRCRES                G  ++ C      F   +  +   DNDPSAGSP
Sbjct: 381 CKSRDIRCRESFSYSKDVHANTTQKRAGDVRKLCSIILGAFCAGVRCSTSFDNDPSAGSP 411

Query: 302 TETLLRLLLPLNDKVQWTSRDVAGSEPPTSPRSEHFTGPFNR 323
           TETLLRLLLPLNDKVQWTSRDVAGSEPPTSPRSEHFTGPFNR
Sbjct: 441 TETLLRLLLPLNDKVQWTSRDVAGSEPPTSPRSEHFTGPFNR 411

BLAST of IVF0004840 vs. NCBI nr
Match: KAE8637537.1 (hypothetical protein CSA_017393 [Cucumis sativus])

HSP 1 Score: 346 bits (887), Expect = 1.43e-116
Identity = 179/228 (78.51%), Postives = 185/228 (81.14%), Query Frame = 0

Query: 1   MPQVDWRTGSSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFS 60
           MPQVDWRTGSSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFS
Sbjct: 1   MPQVDWRTGSSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFS 60

Query: 61  LGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAPFQGTCARSAAEDASPDYNSD 120
           LGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAPFQGTCARSAAEDASPDYNS+
Sbjct: 61  LGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAPFQGTCARSAAEDASPDYNSN 120

Query: 121 VEDARFSSWALPGSLAVTRGILRR----------PFKGRRSKGREGVREVDVE------- 180
           V+DARFSSWALPGSLAVTRGIL R          P +GRRS+G  GVR  DVE       
Sbjct: 121 VDDARFSSWALPGSLAVTRGILSRLTWGRVESVVPLRGRRSEGHAGVRGGDVEAETRHRG 180

Query: 181 -------------DSNLSHPHDGAYGRPVCVPAFTTTPHGE--SCVVG 196
                        DSNLSHPHDGA+GRPVC  A TT+PHG   SCV G
Sbjct: 181 WINHRSVATTSVEDSNLSHPHDGAHGRPVCALARTTSPHGGRGSCVGG 228

BLAST of IVF0004840 vs. NCBI nr
Match: KAG6384451.1 (hypothetical protein SASPL_155737 [Salvia splendens])

HSP 1 Score: 360 bits (924), Expect = 2.59e-114
Identity = 211/343 (61.52%), Postives = 221/343 (64.43%), Query Frame = 0

Query: 11  SPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWG 70
           SPFHIR GHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSP+FSLG+NLPPDWG
Sbjct: 138 SPFHIRPGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPVFSLGRNLPPDWG 197

Query: 71  CIPKQPDSLTAPRGATGSERNGALTLSGAPFQGTCARSAAEDASPDYNSDVEDARFSSWA 130
           CIPKQPDS TAPR ATGS  +GALTLSGAPFQGT ARSAAEDASPDYNSD   ARFSSWA
Sbjct: 198 CIPKQPDSPTAPRDATGSGHDGALTLSGAPFQGTWARSAAEDASPDYNSDGVAARFSSWA 257

Query: 131 LPGSLAVTRGILRRPFKGRRSKGREGVREVDVEDSNLS----HPHDGAYGRPVCVPAFTT 190
            PGSLAVT+GIL       R+   EG+                P  G   R   +     
Sbjct: 258 FPGSLAVTKGILVPGATSTRTTVSEGLSTTACRGDRRRGLDFRPTTGGSARETSIRPRPR 317

Query: 191 TPHGESCVVGAAMRDAQADVPSARRLRAQLAFKDSVVRGILQFTPSIAFRYVLHRCESRD 250
            P G    VGA MRDAQADVPSA+ LRAQLAFKDS+V GILQFTPSIAFRYVLHRCESRD
Sbjct: 318 EPRG----VGATMRDAQADVPSAKWLRAQLAFKDSMVHGILQFTPSIAFRYVLHRCESRD 377

Query: 251 IRCRES---------------------------------LGGGRQRACFPP--------- 295
           IRCRES                                 L     R C PP         
Sbjct: 378 IRCRESFRLSQKEGAPPTPRLRGRAPSTQFPWRFSRRGSLASRVGRRCVPPRHAWTRGAG 437

BLAST of IVF0004840 vs. NCBI nr
Match: KAA0062869.1 (putative transmembrane protein [Cucumis melo var. makuwa])

HSP 1 Score: 294 bits (753), Expect = 1.89e-97
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0

Query: 1   MPQVDWRTGSSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFS 60
           MPQVDWRTGSSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFS
Sbjct: 1   MPQVDWRTGSSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFS 60

Query: 61  LGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAPFQGTCARSAAEDASPDYNSD 120
           LGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAPFQGTCARSAAEDASPDYNSD
Sbjct: 61  LGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAPFQGTCARSAAEDASPDYNSD 120

Query: 121 VEDARFSSWALPGSLAVTRGIL 142
           VEDARFSSWALPGSLAVTRGIL
Sbjct: 121 VEDARFSSWALPGSLAVTRGIL 142

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P0C5Q01.2e-0468.75Putative uncharacterized protein YLR154W-F OS=Saccharomyces cerevisiae (strain A... [more]
Match NameE-valueIdentityDescription
A0A6N2KB501.2e-11161.22Uncharacterized protein (Fragment) OS=Salix viminalis OX=40686 GN=SVIM_LOCUS2082... [more]
A0A6N2MPB62.7e-11161.22Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS385919 PE=4 SV=... [more]
A0A6N2NG361.0e-11063.59Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS504798 PE=4 SV=... [more]
A0A6N2NHA96.7e-11060.46Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS498692 PE=4 SV=... [more]
A0A6N2MQW96.7e-11060.46Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS385895 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
KEH17348.14.60e-13062.70hypothetical protein MTR_0021s0160 [Medicago truncatula][more]
KAF7112640.19.41e-12661.70hypothetical protein RHSIM_RhsimUnG0208700 [Rhododendron simsii] >KAF7112643.1 h... [more]
KAE8637537.11.43e-11678.51hypothetical protein CSA_017393 [Cucumis sativus][more]
KAG6384451.12.59e-11461.52hypothetical protein SASPL_155737 [Salvia splendens][more]
KAA0062869.11.89e-97100.00putative transmembrane protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 300..318
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 300..323
NoneNo IPR availablePANTHERPTHR33047:SF28PROTEIN, PUTATIVE-RELATEDcoord: 40..143
NoneNo IPR availablePANTHERPTHR33047PROTEIN TAR1coord: 40..143

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0004840.1IVF0004840.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane