IVF0004409 (gene) Melon (IVF77) v1

Overview
NameIVF0004409
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionAcyl-CoA-binding domain-containing protein 4
Locationchr08: 13155891 .. 13156118 (+)
RNA-Seq ExpressionIVF0004409
SyntenyIVF0004409
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCGATGGCGAGGGCGAGCTCCGGCTTACAATATCCTGACCGATTCTACGTCGCGGCTTCTTATGCCGATTTTGATGGATCACCAAAATCGTCTTCAAAGGCCCTCAGGTCTAAGTTCTCTGATGAGGCCGCTTTGTTACTCTATGGCTTGTATCAGCAGGTACTACCACGTGTTCTTACACCTGTGACTTATCGGTGTTGTTTCAGTTTGGTTGAGGTTTGA

mRNA sequence

ATGGCTGCGATGGCGAGGGCGAGCTCCGGCTTACAATATCCTGACCGATTCTACGTCGCGGCTTCTTATGCCGATTTTGATGGATCACCAAAATCGTCTTCAAAGGCCCTCAGGTCTAAGTTCTCTGATGAGGCCGCTTTGTTACTCTATGGCTTGTATCAGCAGGTACTACCACGTGTTCTTACACCTGTGACTTATCGGTGTTGTTTCAGTTTGGTTGAGGTTTGA

Coding sequence (CDS)

ATGGCTGCGATGGCGAGGGCGAGCTCCGGCTTACAATATCCTGACCGATTCTACGTCGCGGCTTCTTATGCCGATTTTGATGGATCACCAAAATCGTCTTCAAAGGCCCTCAGGTCTAAGTTCTCTGATGAGGCCGCTTTGTTACTCTATGGCTTGTATCAGCAGGTACTACCACGTGTTCTTACACCTGTGACTTATCGGTGTTGTTTCAGTTTGGTTGAGGTTTGA

Protein sequence

MAAMARASSGLQYPDRFYVAASYADFDGSPKSSSKALRSKFSDEAALLLYGLYQQVLPRVLTPVTYRCCFSLVEV
Homology
[Close]
BLAST of IVF0004409 vs. ExPASy Swiss-Prot
Match: Q8RWD9 (Acyl-CoA-binding domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=ACBP5 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 2.3e-10
Identity = 36/55 (65.45%), Postives = 42/55 (76.36%), Query Frame = 0 

Query: 1  MAAMARASSGLQYPDRFYVAASYADFDGSPKSSSKALRSKFSDEAALLLYGLYQQ 56
          MA M RASSGL YP+RFY AASY   DGS +SS K L SKFS++ +LLLY L+QQ
Sbjct: 1  MAHMVRASSGLSYPERFYAAASYVGLDGS-QSSVKQLSSKFSNDTSLLLYTLHQQ 54

[Close]
BLAST of IVF0004409 vs. ExPASy Swiss-Prot
Match: Q9MA55 (Acyl-CoA-binding domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=ACBP4 PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 3.3e-09
Identity = 34/53 (64.15%), Postives = 39/53 (73.58%), Query Frame = 0 

Query: 3  AMARASSGLQYPDRFYVAASYADFDGSPKSSSKALRSKFSDEAALLLYGLYQQ 56
          AM RA+SG  YP+RFY AASY   DGS  SS+K + SKF D+ ALLLY LYQQ
Sbjct: 2  AMPRATSGPAYPERFYAAASYVGLDGS-DSSAKNVISKFPDDTALLLYALYQQ 53

[Close]
BLAST of IVF0004409 vs. ExPASy Swiss-Prot
Match: Q75LJ4 (Acyl-CoA-binding domain-containing protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=ACBP6 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 1.6e-08
Identity = 35/66 (53.03%), Postives = 41/66 (62.12%), Query Frame = 0 

Query: 7  ASSGLQYPDRFYVAASYADFDGSPKSSSKALRSKFSDEAALLLYGLYQQVL--------P 65
          ASSGL YPDRFY AA+YA F     +SS A+ S+F ++ ALLLYGLYQQ          P
Sbjct: 2  ASSGLAYPDRFYAAAAYAGFGAGGATSSSAI-SRFQNDVALLLYGLYQQATVGPCNVPKP 61

[Close]
BLAST of IVF0004409 vs. ExPASy TrEMBL
Match: A0A5D3C7Q0 (Acyl-CoA-binding domain-containing protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1702G00220 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 6.4e-32
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0 

Query: 1  MAAMARASSGLQYPDRFYVAASYADFDGSPKSSSKALRSKFSDEAALLLYGLYQQVLPRV 60
          MAAMARASSGLQYPDRFYVAASYADFDGSPKSSSKALRSKFSDEAALLLYGLYQQVLPRV
Sbjct: 1  MAAMARASSGLQYPDRFYVAASYADFDGSPKSSSKALRSKFSDEAALLLYGLYQQVLPRV 60

Query: 61 LTPVTYRCCFSLVE 75
          LTPVTYRCCFSLVE
Sbjct: 61 LTPVTYRCCFSLVE 74

[Close]
BLAST of IVF0004409 vs. ExPASy TrEMBL
Match: A0A5A7TXT8 (Acyl-CoA-binding domain-containing protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00610 PE=3 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 7.1e-31
Identity = 72/75 (96.00%), Postives = 73/75 (97.33%), Query Frame = 0 

Query: 1  MAAMARASSGLQYPDRFYVAASYADFDGSPKSSSKALRSKFSDEAALLLYGLYQQVLPRV 60
          MAAMARASSGLQYPDRFY AASYA FDGSPKSSSKALRSKFSDEAALLLYGLYQQVLPRV
Sbjct: 1  MAAMARASSGLQYPDRFYAAASYAGFDGSPKSSSKALRSKFSDEAALLLYGLYQQVLPRV 60

Query: 61 LTPVTYRCCFSLVEV 76
          LTPVTYRCCFSLVE+
Sbjct: 61 LTPVTYRCCFSLVEI 75

[Close]
BLAST of IVF0004409 vs. ExPASy TrEMBL
Match: A0A5D3CJT5 (Acyl-CoA-binding domain-containing protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold828G00570 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.8e-29
Identity = 70/74 (94.59%), Postives = 70/74 (94.59%), Query Frame = 0 

Query: 1  MAAMARASSGLQYPDRFYVAASYADFDGSPKSSSKALRSKFSDEAALLLYGLYQQVLPRV 60
          MAAM RASSGLQYPDRFY AASYA FDGSPK SSKALRSKFSDEAALLLYGLYQQVLPRV
Sbjct: 1  MAAMVRASSGLQYPDRFYAAASYAGFDGSPKLSSKALRSKFSDEAALLLYGLYQQVLPRV 60

Query: 61 LTPVTYRCCFSLVE 75
          LTPVTYRCCFSLVE
Sbjct: 61 LTPVTYRCCFSLVE 74

[Close]
BLAST of IVF0004409 vs. ExPASy TrEMBL
Match: A0A5D3C6F7 (Acyl-CoA-binding domain-containing protein 4 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G002100 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 5.1e-29
Identity = 69/74 (93.24%), Postives = 69/74 (93.24%), Query Frame = 0 

Query: 1  MAAMARASSGLQYPDRFYVAASYADFDGSPKSSSKALRSKFSDEAALLLYGLYQQVLPRV 60
          MA M RASSGLQYPDRFY AASYA FDGSPK SSKALRSKFSDEAALLLYGLYQQVLPRV
Sbjct: 1  MAVMVRASSGLQYPDRFYAAASYAGFDGSPKLSSKALRSKFSDEAALLLYGLYQQVLPRV 60

Query: 61 LTPVTYRCCFSLVE 75
          LTPVTYRCCFSLVE
Sbjct: 61 LTPVTYRCCFSLVE 74

[Close]
BLAST of IVF0004409 vs. ExPASy TrEMBL
Match: A0A5A7VFV5 (Acyl-CoA-binding domain-containing protein 4 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold979G00450 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 5.1e-29
Identity = 69/74 (93.24%), Postives = 70/74 (94.59%), Query Frame = 0 

Query: 1  MAAMARASSGLQYPDRFYVAASYADFDGSPKSSSKALRSKFSDEAALLLYGLYQQVLPRV 60
          MAAM RASSGLQYPDRFY AASYA FDGSPK SSKALRSKFSDEAALLLYGLYQQVLPRV
Sbjct: 1  MAAMVRASSGLQYPDRFYAAASYAGFDGSPKLSSKALRSKFSDEAALLLYGLYQQVLPRV 60

Query: 61 LTPVTYRCCFSLVE 75
          LTPVTY+CCFSLVE
Sbjct: 61 LTPVTYQCCFSLVE 74

[Close]
BLAST of IVF0004409 vs. NCBI nr
Match: TYK07505.1 (acyl-CoA-binding domain-containing protein 4 [Cucumis melo var. makuwa])

HSP 1 Score: 145 bits (367), Expect = 5.34e-42
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0 

Query: 1  MAAMARASSGLQYPDRFYVAASYADFDGSPKSSSKALRSKFSDEAALLLYGLYQQVLPRV 60
          MAAMARASSGLQYPDRFYVAASYADFDGSPKSSSKALRSKFSDEAALLLYGLYQQVLPRV
Sbjct: 1  MAAMARASSGLQYPDRFYVAASYADFDGSPKSSSKALRSKFSDEAALLLYGLYQQVLPRV 60

Query: 61 LTPVTYRCCFSLVE 74
          LTPVTYRCCFSLVE
Sbjct: 61 LTPVTYRCCFSLVE 74

[Close]
BLAST of IVF0004409 vs. NCBI nr
Match: KAA0063418.1 (acyl-CoA-binding domain-containing protein 4 [Cucumis melo var. makuwa] >TYK11680.1 acyl-CoA-binding domain-containing protein 4 [Cucumis melo var. makuwa])

HSP 1 Score: 137 bits (346), Expect = 7.59e-40
Identity = 70/74 (94.59%), Postives = 70/74 (94.59%), Query Frame = 0 

Query: 1  MAAMARASSGLQYPDRFYVAASYADFDGSPKSSSKALRSKFSDEAALLLYGLYQQVLPRV 60
          MAAM RASSGLQYPDRFY AASYA FDGSPK SSKALRSKFSDEAALLLYGLYQQVLPRV
Sbjct: 1  MAAMVRASSGLQYPDRFYAAASYAGFDGSPKLSSKALRSKFSDEAALLLYGLYQQVLPRV 60

Query: 61 LTPVTYRCCFSLVE 74
          LTPVTYRCCFSLVE
Sbjct: 61 LTPVTYRCCFSLVE 74

[Close]
BLAST of IVF0004409 vs. NCBI nr
Match: KAA0025187.1 (acyl-CoA-binding domain-containing protein 4 isoform X2 [Cucumis melo var. makuwa] >TYK07477.1 acyl-CoA-binding domain-containing protein 4 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 136 bits (342), Expect = 9.47e-40
Identity = 69/74 (93.24%), Postives = 69/74 (93.24%), Query Frame = 0 

Query: 1  MAAMARASSGLQYPDRFYVAASYADFDGSPKSSSKALRSKFSDEAALLLYGLYQQVLPRV 60
          MA M RASSGLQYPDRFY AASYA FDGSPK SSKALRSKFSDEAALLLYGLYQQVLPRV
Sbjct: 1  MAVMVRASSGLQYPDRFYAAASYAGFDGSPKLSSKALRSKFSDEAALLLYGLYQQVLPRV 60

Query: 61 LTPVTYRCCFSLVE 74
          LTPVTYRCCFSLVE
Sbjct: 61 LTPVTYRCCFSLVE 74

[Close]
BLAST of IVF0004409 vs. NCBI nr
Match: KAA0031885.1 (acyl-CoA-binding domain-containing protein 4 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 136 bits (342), Expect = 2.14e-39
Identity = 69/74 (93.24%), Postives = 69/74 (93.24%), Query Frame = 0 

Query: 1  MAAMARASSGLQYPDRFYVAASYADFDGSPKSSSKALRSKFSDEAALLLYGLYQQVLPRV 60
          MAAM RASSGLQYPDRFY AASYA FDGSPK SSKALRSKFSDEAALLLYGLYQQVLPR 
Sbjct: 1  MAAMVRASSGLQYPDRFYAAASYAGFDGSPKLSSKALRSKFSDEAALLLYGLYQQVLPRA 60

Query: 61 LTPVTYRCCFSLVE 74
          LTPVTYRCCFSLVE
Sbjct: 61 LTPVTYRCCFSLVE 74

[Close]
BLAST of IVF0004409 vs. NCBI nr
Match: KAA0066628.1 (acyl-CoA-binding domain-containing protein 4 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 136 bits (342), Expect = 2.14e-39
Identity = 69/74 (93.24%), Postives = 70/74 (94.59%), Query Frame = 0 

Query: 1  MAAMARASSGLQYPDRFYVAASYADFDGSPKSSSKALRSKFSDEAALLLYGLYQQVLPRV 60
          MAAM RASSGLQYPDRFY AASYA FDGSPK SSKALRSKFSDEAALLLYGLYQQVLPRV
Sbjct: 1  MAAMVRASSGLQYPDRFYAAASYAGFDGSPKLSSKALRSKFSDEAALLLYGLYQQVLPRV 60

Query: 61 LTPVTYRCCFSLVE 74
          LTPVTY+CCFSLVE
Sbjct: 61 LTPVTYQCCFSLVE 74

[Close]
BLAST of IVF0004409 vs. TAIR 10
Match: AT5G27630.1 (acyl-CoA binding protein 5 )

HSP 1 Score: 65.9 bits (159), Expect = 1.6e-11
Identity = 36/55 (65.45%), Postives = 42/55 (76.36%), Query Frame = 0 

Query: 1  MAAMARASSGLQYPDRFYVAASYADFDGSPKSSSKALRSKFSDEAALLLYGLYQQ 56
          MA M RASSGL YP+RFY AASY   DGS +SS K L SKFS++ +LLLY L+QQ
Sbjct: 1  MAHMVRASSGLSYPERFYAAASYVGLDGS-QSSVKQLSSKFSNDTSLLLYTLHQQ 54

[Close]
BLAST of IVF0004409 vs. TAIR 10
Match: AT3G05420.1 (acyl-CoA binding protein 4 )

HSP 1 Score: 62.0 bits (149), Expect = 2.4e-10
Identity = 34/53 (64.15%), Postives = 39/53 (73.58%), Query Frame = 0 

Query: 3  AMARASSGLQYPDRFYVAASYADFDGSPKSSSKALRSKFSDEAALLLYGLYQQ 56
          AM RA+SG  YP+RFY AASY   DGS  SS+K + SKF D+ ALLLY LYQQ
Sbjct: 2  AMPRATSGPAYPERFYAAASYVGLDGS-DSSAKNVISKFPDDTALLLYALYQQ 53

[Close]
BLAST of IVF0004409 vs. TAIR 10
Match: AT3G05420.2 (acyl-CoA binding protein 4 )

HSP 1 Score: 62.0 bits (149), Expect = 2.4e-10
Identity = 34/53 (64.15%), Postives = 39/53 (73.58%), Query Frame = 0 

Query: 3  AMARASSGLQYPDRFYVAASYADFDGSPKSSSKALRSKFSDEAALLLYGLYQQ 56
          AM RA+SG  YP+RFY AASY   DGS  SS+K + SKF D+ ALLLY LYQQ
Sbjct: 2  AMPRATSGPAYPERFYAAASYVGLDGS-DSSAKNVISKFPDDTALLLYALYQQ 53

The following BLAST results are available for this feature:
BLAST of IVF0004409 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8RWD92.3e-1065.45Acyl-CoA-binding domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=... [more]
Q9MA553.3e-0964.15Acyl-CoA-binding domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=... [more]
Q75LJ41.6e-0853.03Acyl-CoA-binding domain-containing protein 6 OS=Oryza sativa subsp. japonica OX=... [more]
BLAST of IVF0004409 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3C7Q06.4e-32100.00Acyl-CoA-binding domain-containing protein 4 OS=Cucumis melo var. makuwa OX=1194... [more]
A0A5A7TXT87.1e-3196.00Acyl-CoA-binding domain-containing protein 4 OS=Cucumis melo var. makuwa OX=1194... [more]
A0A5D3CJT51.8e-2994.59Acyl-CoA-binding domain-containing protein 4 OS=Cucumis melo var. makuwa OX=1194... [more]
A0A5D3C6F75.1e-2993.24Acyl-CoA-binding domain-containing protein 4 isoform X2 OS=Cucumis melo var. mak... [more]
A0A5A7VFV55.1e-2993.24Acyl-CoA-binding domain-containing protein 4 isoform X2 OS=Cucumis melo var. mak... [more]
BLAST of IVF0004409 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK07505.15.34e-42100.00acyl-CoA-binding domain-containing protein 4 [Cucumis melo var. makuwa][more]
KAA0063418.17.59e-4094.59acyl-CoA-binding domain-containing protein 4 [Cucumis melo var. makuwa] >TYK1168... [more]
KAA0025187.19.47e-4093.24acyl-CoA-binding domain-containing protein 4 isoform X2 [Cucumis melo var. makuw... [more]
KAA0031885.12.14e-3993.24acyl-CoA-binding domain-containing protein 4 isoform X2 [Cucumis melo var. makuw... [more]
KAA0066628.12.14e-3993.24acyl-CoA-binding domain-containing protein 4 isoform X2 [Cucumis melo var. makuw... [more]
BLAST of IVF0004409 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G27630.11.6e-1165.45acyl-CoA binding protein 5 [more]
AT3G05420.12.4e-1064.15acyl-CoA binding protein 4 [more]
AT3G05420.22.4e-1064.15acyl-CoA binding protein 4 [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0004409.1IVF0004409.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006004 fucose metabolic process
biological_process GO:0006869 lipid transport
cellular_component GO:0005829 cytosol
molecular_function GO:0000062 fatty-acyl-CoA binding
molecular_function GO:0008289 lipid binding
molecular_function GO:0016740 transferase activity