IVF0004335 (gene) Melon (IVF77) v1

Overview


Name	IVF0004335
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	chr05: 23530793 .. 23534902 (-)
RNA-Seq Expression	IVF0004335
Synteny	IVF0004335

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAACAACAATTTAGTTCCCTTCCAAGTACCTCGACTTACGAAAGAAAATTATAGTAGTTGGTGTATTCGAATGAAAGCTCTACTTGGTTCACAAGATGTGTGGGACATTGTTAGTAATGGTTATGAAGAACCAGAAAGTGATGCAGCTTTGAATCAAGCTCAACGAGAAGCTTTACAAAATACAAGAAAAAAAGATCAAAAGGCTCTCACCATCATTCATCAAGCCATTGATGATAACAATTTTGAGAAAATTTCTGGAGCAACTACTGCATATCAAGCATGGCAAATTTTGGAGAATACGTATAAAGGAGTAGATCGAGTCAAGAAGGTTCGTCTTCAAAAATTGAGAGGTGATTATGAATCACTACATATGAAGGAGTCTGAATCAGTTTCAGATTATACTTCAAGATTGCTAGCAGTAGTAAATGAAATGAAAAGATTTGGTGAGACAATAAGCGATGAGCAAGTAGTAGAAAAGATACTTCGCTCATTGGATGAAAAATTTAATTTCATCGTTGTAGCTATTGAAGAATCAAAGGATTTGAGTACAATGTCCATTGATCAACTTATGGGTTCTTTACAAGCCCATGAAGAGAAGCTTCTTAAGAAGAACAAGCAGATGACTGAGCAACTTTTTCAGTCAAAGTTGAAATTAAAAGACAAGGAAGGCAACCTAGAAAAAGGAAATCGAGGTCGAGGACGTGGTGGTAATCGTGGACGTGGTGATTTCAAAGATCGAGGTCAAGGAAGCTACGGTCAAAGAAAATTTGATGAGAGTAATTCAAACTCAAATTCATCAAGAGGTAGAGGAAGACAACATTATTCGAGGTCAAGTTGGGAAAGATCAAATAATGACAGGAGATATGACAAAAGACAGGTTGAATGTTATAATTGTCATAAATTCGGCCATTATTCTTGGGAATGCAGAAATAAAGTTGAAGAAAATGCAAATTATGCTGAGAAAGATGAAGAAAGCGGTGATTCCTCATTGTTTCTAGCATGCAAAGGTGCGGAAACATGTGAAAACAGTGCATGGTATCTCGATAGTGGTGCAAGCAATCACATGTGTGGAAGTAAATCAATGTTCATTGAACTTGATGAATCTGTTGGTGGCGATATCGTATTTGGTGATGCCACAAAAATTCCAGTTAAAGGAAAAGGTAAGATTTTGATCAATTTGAAGAATGGGAAGCATGAGTTTATCTCTAATGTTTATTATGTGCCTAATATGAAGAACAACATTTTGAGTTTGGGGCAACTCTTAGAGAAAGGCTATAATATTTTGATGAAGGATTATAGTCTTTTGATAAGAGATAATCATGACAAAATTATTGCTAAAGTGCAAATGACGAAAAATAGAATGTTTTTATTAAACATTCAAACTGATGTTGCTCAATGTTTAAAGTCATGTTTGAAAGATCCCAATTGGATTTGGCACTTGAGATTTGGGCATTTGAACTTTGATGGCTTAAGATTATTAGCCAGGAAGAACATGGTGAAAGGGTTGCCATATGTCAAACTTCCAGATCAACTTTGTGAAGGTTGTCTTCATGGCAAACAATCAAGGAAGAGTTTTCCACAAGAATCATCTTGGAGAGCAAGGAGACCACTAGAGTTAGTTCACACGGATCTTTGTGGACCGATCAAACCAAGTTCTTTTGGTAAGAATAATTATTTCTTATTATTTATTGATGATTTCAGTCGGAAAACTTGGGTTTACTTTGTCAAAGAGAAATCAGAAGTATTTGGCATGTTCAAGAGATTTAAAGCTCTTGTTGAAAAAGAAAGTGGTTATTACATTAAAGCTTTGAGATCAGACAGGGGAGGTGAATTCACTTCAAATGAATTCAAAACTTTTTGCGTAGAAAATGGAATCCGTCGCACTATGACAGTTCCATTTACTCCTCAACAAAATGGTGTTGTTGAAAGGAAGAACCGAACAATACTTAACATGGCTCGAAGCATGTTGAAGTGCAAGAAGATGCCAAAAGAATTTTGGGCACAAGCTGTTGAGTGTGCAGTGTACTTGTCAAATCGTTCCCCTACTAGAAGCTTATGGAACAAAACTCCTCAACAAGCATGGACAGGAAGAAAACCATCCATTGGTCATTTGAGAGTATTCGGATGCATGGCTTATGCGCATATACCTGATCAAAAGCGTAGTAAGCTTGATGATAAAAGTGAGAAATATGTGTTTGTTGGCTATGATGCAAGCTCAAAAGGCTACAAGCTTTATAATCCTGTTACAAAGAAGACGATCGTAAGCAGAGATGTTGTGTTTGATGAAGAAGCATCATGGAATTGGAATGACGAACCAGAAGATTACAATTTTGTGTTTTTTCCCGACGAACGTGATGAGCCTAGTGACATTGCTTCTCCACCAACATCGCCAATCACTCCACAACAAAGCACATCTTCATCATCTGCAAGTTCAAGTGAAGGGCCTCGTGGCATGAGAAGCTTACAAGACATATATGATGAAACTGAAGAGTTAAGTCAAAGTTTTAATAACCTTACTCTTTTTTGTCTATTTGGTGACAGTGAACCTTTGAATTTTGAAGAAGCTTCGCAAAATGACAAATGGAAGATTGCTATGGATGAAGAGATAAAAGCCATAAAAAAGAATGATACGTGGGAACTTTCTACTCTTCCAAATGGAAAGAAAGCAGTAGGTGTCAAATGGGTGTTCAAGATAAAAAGAAATGAAAAGGGAGAAGTGGAGAGATACAAAGCAAGATTAGTTGCAAAAGGATATTCTCAAAGAAAAGGCATTGATTATGATGAAGTATTTGCTCCCGTTGCTCGTTTGGAAACCATAAGGTTGTTAATTGCTCTTGCTGCACAAAATAATTGGAAGATCTTTCAGATGGATGTCAAATCGGCATTTTTGAATGGATATCTAGAAGAAGAAGTCTACTTGGAACAACCTCCTGGTTATTCTGTGAAAGGCCAAGAGGATAAAGTTCTAAAATTGAAGAAGGCATTATACGGATTGAAACAAGCACCAAGAATGTGGAATAGCAGAATCAACAAATATTTCCTTGATAATGGGTATTTGAGGTGTCCTTATGAACATTCTCTTTATATTAAGGTTAATGGTCATGGAGATATTTTGGTAGTTTGTTTGTACGTGGATGACTTAATTTTTACAGGAAATTGTGCAAGTATGTTTGAAGATCTCAAGAAGGCGATGACCCAAGAATTTGAAATGACAGATATAGGGCTAATGTCATATTATCTTGGCATTGAAGTGAAGCAGTCAGAGGAAGGAATTTTCATCTCTCAAGAACGATATACTAGAGAAATTCTAGAGAAGTTCAATATGATGAATTCTAAGCCTGTCGCAACTCCGATTGAAACTGGGACCAAACTGTCCAAACATGAAGAAGGAGATGATGTTGATCCTTCATATTTCAAAAGTTTGGTTGGGAGTTTGAGATATTTGACTTGCACACGACCAGATATTCTTTTCAGCGTTGGATTGGTGAGTCGATTTATGGAATCTCCTACAACTACTCATTTGAAAGTGGCAAAGAGAATTCTTCGTTACCTCAGAGGTACGCTTGACTATGGGTTGTTTTATTCTTCATCTAAAGAATTCAAGCTTGAAGGCTATTGTGATAGTGACTGGGCTGGAGATACTAATGATCGAAAGAGCACTAGTGGATATGTTTTCTTCATTGGCAATACTGCATTTACATGGAGTTCTAAGAAGCAACCTATTGTGACATTATCCACTTGTGAGGCAGAATACGTTGCTGCAGCTTCATGTGTTTGTCATGCAGTTTGGTTAAGAAATTTGTTAAAGACAGTTGGAATTTTGCAAGAAGATCCAACTGTGATTCATATAGACAATAAGTCAACAATTGCTTTAGCAAAGAATCCTGTGTTCCATGATCGTAGCAAACACATTGATACAAGATTTCACTTCATCAGAGATTGCATTTCAAGGAAGGAAGTTCAAGTTGAATATGTGAAGACTGAAGATCAAATTGCAGATATTTTTACGAAGCCACTCAAAGTTAATGTGTTTAACAACTTAAGAACTTTGCTTGGAGTTTTTCAAAACAAAAAAACATGTTTAAGGGAGGATGTTGAAAATTAA

mRNA sequence

ATGGCAAACAACAATTTAGTTCCCTTCCAAGTACCTCGACTTACGAAAGAAAATTATAGTAGTTGGTGTATTCGAATGAAAGCTCTACTTGGTTCACAAGATGTGTGGGACATTGTTAGTAATGGTTATGAAGAACCAGAAAGTGATGCAGCTTTGAATCAAGCTCAACGAGAAGCTTTACAAAATACAAGAAAAAAAGATCAAAAGGCTCTCACCATCATTCATCAAGCCATTGATGATAACAATTTTGAGAAAATTTCTGGAGCAACTACTGCATATCAAGCATGGCAAATTTTGGAGAATACGTATAAAGGAGTAGATCGAGTCAAGAAGGTTCGTCTTCAAAAATTGAGAGGTGATTATGAATCACTACATATGAAGGAGTCTGAATCAGTTTCAGATTATACTTCAAGATTGCTAGCAGTAGTAAATGAAATGAAAAGATTTGGTGAGACAATAAGCGATGAGCAAGTAGTAGAAAAGATACTTCGCTCATTGGATGAAAAATTTAATTTCATCGTTGTAGCTATTGAAGAATCAAAGGATTTGAGTACAATGTCCATTGATCAACTTATGGGTTCTTTACAAGCCCATGAAGAGAAGCTTCTTAAGAAGAACAAGCAGATGACTGAGCAACTTTTTCAGTCAAAGTTGAAATTAAAAGACAAGGAAGGCAACCTAGAAAAAGGAAATCGAGGTCGAGGACGTGGTGGTAATCGTGGACGTGGTGATTTCAAAGATCGAGGTCAAGGAAGCTACGGTCAAAGAAAATTTGATGAGAGTAATTCAAACTCAAATTCATCAAGAGGTAGAGGAAGACAACATTATTCGAGGTCAAGTTGGGAAAGATCAAATAATGACAGGAGATATGACAAAAGACAGGTTGAATGTTATAATTGTCATAAATTCGGCCATTATTCTTGGGAATGCAGAAATAAAGTTGAAGAAAATGCAAATTATGCTGAGAAAGATGAAGAAAGCGGTGATTCCTCATTGTTTCTAGCATGCAAAGGTGCGGAAACATGTGAAAACAGTGCATGGTATCTCGATAGTGGTGCAAGCAATCACATGTGTGGAAGTAAATCAATGTTCATTGAACTTGATGAATCTGTTGGTGGCGATATCGTATTTGGTGATGCCACAAAAATTCCAGTTAAAGGAAAAGGTAAGATTTTGATCAATTTGAAGAATGGGAAGCATGAGTTTATCTCTAATGTTTATTATGTGCCTAATATGAAGAACAACATTTTGAGTTTGGGGCAACTCTTAGAGAAAGGCTATAATATTTTGATGAAGGATTATAGTCTTTTGATAAGAGATAATCATGACAAAATTATTGCTAAAGTGCAAATGACGAAAAATAGAATGTTTTTATTAAACATTCAAACTGATGTTGCTCAATGTTTAAAGTCATGTTTGAAAGATCCCAATTGGATTTGGCACTTGAGATTTGGGCATTTGAACTTTGATGGCTTAAGATTATTAGCCAGGAAGAACATGGTGAAAGGGTTGCCATATGTCAAACTTCCAGATCAACTTTGTGAAGGTTGTCTTCATGGCAAACAATCAAGGAAGAGTTTTCCACAAGAATCATCTTGGAGAGCAAGGAGACCACTAGAGTTAGTTCACACGGATCTTTGTGGACCGATCAAACCAAGTTCTTTTGGTAAGAATAATTATTTCTTATTATTTATTGATGATTTCAGTCGGAAAACTTGGGTTTACTTTGTCAAAGAGAAATCAGAAGTATTTGGCATGTTCAAGAGATTTAAAGCTCTTGTTGAAAAAGAAAGTGGTTATTACATTAAAGCTTTGAGATCAGACAGGGGAGGTGAATTCACTTCAAATGAATTCAAAACTTTTTGCGTAGAAAATGGAATCCGTCGCACTATGACAGTTCCATTTACTCCTCAACAAAATGGTGTTGTTGAAAGGAAGAACCGAACAATACTTAACATGGCTCGAAGCATGTTGAAGTGCAAGAAGATGCCAAAAGAATTTTGGGCACAAGCTGTTGAGTGTGCAGTGTACTTGTCAAATCGTTCCCCTACTAGAAGCTTATGGAACAAAACTCCTCAACAAGCATGGACAGGAAGAAAACCATCCATTGGTCATTTGAGAGTATTCGGATGCATGGCTTATGCGCATATACCTGATCAAAAGCGTAGTAAGCTTGATGATAAAAGTGAGAAATATGTGTTTGTTGGCTATGATGCAAGCTCAAAAGGCTACAAGCTTTATAATCCTGTTACAAAGAAGACGATCGTAAGCAGAGATGTTGTGTTTGATGAAGAAGCATCATGGAATTGGAATGACGAACCAGAAGATTACAATTTTGTGTTTTTTCCCGACGAACGTGATGAGCCTAGTGACATTGCTTCTCCACCAACATCGCCAATCACTCCACAACAAAGCACATCTTCATCATCTGCAAGTTCAAGTGAAGGGCCTCGTGGCATGAGAAGCTTACAAGACATATATGATGAAACTGAAGAGTTAAGTCAAAGTTTTAATAACCTTACTCTTTTTTGTCTATTTGGTGACAGTGAACCTTTGAATTTTGAAGAAGCTTCGCAAAATGACAAATGGAAGATTGCTATGGATGAAGAGATAAAAGCCATAAAAAAGAATGATACGTGGGAACTTTCTACTCTTCCAAATGGAAAGAAAGCAGTAGGTGTCAAATGGGTGTTCAAGATAAAAAGAAATGAAAAGGGAGAAGTGGAGAGATACAAAGCAAGATTAGTTGCAAAAGGATATTCTCAAAGAAAAGGCATTGATTATGATGAAGTATTTGCTCCCGTTGCTCGTTTGGAAACCATAAGGTTGTTAATTGCTCTTGCTGCACAAAATAATTGGAAGATCTTTCAGATGGATGTCAAATCGGCATTTTTGAATGGATATCTAGAAGAAGAAGTCTACTTGGAACAACCTCCTGGTTATTCTGTGAAAGGCCAAGAGGATAAAGTTCTAAAATTGAAGAAGGCATTATACGGATTGAAACAAGCACCAAGAATGTGGAATAGCAGAATCAACAAATATTTCCTTGATAATGGGTATTTGAGGTGTCCTTATGAACATTCTCTTTATATTAAGGTTAATGGTCATGGAGATATTTTGGTAGTTTGTTTGTACGTGGATGACTTAATTTTTACAGGAAATTGTGCAAGTATGTTTGAAGATCTCAAGAAGGCGATGACCCAAGAATTTGAAATGACAGATATAGGGCTAATGTCATATTATCTTGGCATTGAAGTGAAGCAGTCAGAGGAAGGAATTTTCATCTCTCAAGAACGATATACTAGAGAAATTCTAGAGAAGTTCAATATGATGAATTCTAAGCCTGTCGCAACTCCGATTGAAACTGGGACCAAACTGTCCAAACATGAAGAAGGAGATGATGTTGATCCTTCATATTTCAAAAGTTTGGTTGGGAGTTTGAGATATTTGACTTGCACACGACCAGATATTCTTTTCAGCGTTGGATTGGTGAGTCGATTTATGGAATCTCCTACAACTACTCATTTGAAAGTGGCAAAGAGAATTCTTCGTTACCTCAGAGGTACGCTTGACTATGGGTTGTTTTATTCTTCATCTAAAGAATTCAAGCTTGAAGGCTATTGTGATAGTGACTGGGCTGGAGATACTAATGATCGAAAGAGCACTAGTGGATATGTTTTCTTCATTGGCAATACTGCATTTACATGGAGTTCTAAGAAGCAACCTATTGTGACATTATCCACTTGTGAGGCAGAATACGTTGCTGCAGCTTCATGTGTTTGTCATGCAGTTTGGTTAAGAAATTTGTTAAAGACAGTTGGAATTTTGCAAGAAGATCCAACTGTGATTCATATAGACAATAAGTCAACAATTGCTTTAGCAAAGAATCCTGTGTTCCATGATCGTAGCAAACACATTGATACAAGATTTCACTTCATCAGAGATTGCATTTCAAGGAAGGAAGTTCAAGTTGAATATGTGAAGACTGAAGATCAAATTGCAGATATTTTTACGAAGCCACTCAAAGTTAATGTGTTTAACAACTTAAGAACTTTGCTTGGAGTTTTTCAAAACAAAAAAACATGTTTAAGGGAGGATGTTGAAAATTAA

Coding sequence (CDS)

ATGGCAAACAACAATTTAGTTCCCTTCCAAGTACCTCGACTTACGAAAGAAAATTATAGTAGTTGGTGTATTCGAATGAAAGCTCTACTTGGTTCACAAGATGTGTGGGACATTGTTAGTAATGGTTATGAAGAACCAGAAAGTGATGCAGCTTTGAATCAAGCTCAACGAGAAGCTTTACAAAATACAAGAAAAAAAGATCAAAAGGCTCTCACCATCATTCATCAAGCCATTGATGATAACAATTTTGAGAAAATTTCTGGAGCAACTACTGCATATCAAGCATGGCAAATTTTGGAGAATACGTATAAAGGAGTAGATCGAGTCAAGAAGGTTCGTCTTCAAAAATTGAGAGGTGATTATGAATCACTACATATGAAGGAGTCTGAATCAGTTTCAGATTATACTTCAAGATTGCTAGCAGTAGTAAATGAAATGAAAAGATTTGGTGAGACAATAAGCGATGAGCAAGTAGTAGAAAAGATACTTCGCTCATTGGATGAAAAATTTAATTTCATCGTTGTAGCTATTGAAGAATCAAAGGATTTGAGTACAATGTCCATTGATCAACTTATGGGTTCTTTACAAGCCCATGAAGAGAAGCTTCTTAAGAAGAACAAGCAGATGACTGAGCAACTTTTTCAGTCAAAGTTGAAATTAAAAGACAAGGAAGGCAACCTAGAAAAAGGAAATCGAGGTCGAGGACGTGGTGGTAATCGTGGACGTGGTGATTTCAAAGATCGAGGTCAAGGAAGCTACGGTCAAAGAAAATTTGATGAGAGTAATTCAAACTCAAATTCATCAAGAGGTAGAGGAAGACAACATTATTCGAGGTCAAGTTGGGAAAGATCAAATAATGACAGGAGATATGACAAAAGACAGGTTGAATGTTATAATTGTCATAAATTCGGCCATTATTCTTGGGAATGCAGAAATAAAGTTGAAGAAAATGCAAATTATGCTGAGAAAGATGAAGAAAGCGGTGATTCCTCATTGTTTCTAGCATGCAAAGGTGCGGAAACATGTGAAAACAGTGCATGGTATCTCGATAGTGGTGCAAGCAATCACATGTGTGGAAGTAAATCAATGTTCATTGAACTTGATGAATCTGTTGGTGGCGATATCGTATTTGGTGATGCCACAAAAATTCCAGTTAAAGGAAAAGGTAAGATTTTGATCAATTTGAAGAATGGGAAGCATGAGTTTATCTCTAATGTTTATTATGTGCCTAATATGAAGAACAACATTTTGAGTTTGGGGCAACTCTTAGAGAAAGGCTATAATATTTTGATGAAGGATTATAGTCTTTTGATAAGAGATAATCATGACAAAATTATTGCTAAAGTGCAAATGACGAAAAATAGAATGTTTTTATTAAACATTCAAACTGATGTTGCTCAATGTTTAAAGTCATGTTTGAAAGATCCCAATTGGATTTGGCACTTGAGATTTGGGCATTTGAACTTTGATGGCTTAAGATTATTAGCCAGGAAGAACATGGTGAAAGGGTTGCCATATGTCAAACTTCCAGATCAACTTTGTGAAGGTTGTCTTCATGGCAAACAATCAAGGAAGAGTTTTCCACAAGAATCATCTTGGAGAGCAAGGAGACCACTAGAGTTAGTTCACACGGATCTTTGTGGACCGATCAAACCAAGTTCTTTTGGTAAGAATAATTATTTCTTATTATTTATTGATGATTTCAGTCGGAAAACTTGGGTTTACTTTGTCAAAGAGAAATCAGAAGTATTTGGCATGTTCAAGAGATTTAAAGCTCTTGTTGAAAAAGAAAGTGGTTATTACATTAAAGCTTTGAGATCAGACAGGGGAGGTGAATTCACTTCAAATGAATTCAAAACTTTTTGCGTAGAAAATGGAATCCGTCGCACTATGACAGTTCCATTTACTCCTCAACAAAATGGTGTTGTTGAAAGGAAGAACCGAACAATACTTAACATGGCTCGAAGCATGTTGAAGTGCAAGAAGATGCCAAAAGAATTTTGGGCACAAGCTGTTGAGTGTGCAGTGTACTTGTCAAATCGTTCCCCTACTAGAAGCTTATGGAACAAAACTCCTCAACAAGCATGGACAGGAAGAAAACCATCCATTGGTCATTTGAGAGTATTCGGATGCATGGCTTATGCGCATATACCTGATCAAAAGCGTAGTAAGCTTGATGATAAAAGTGAGAAATATGTGTTTGTTGGCTATGATGCAAGCTCAAAAGGCTACAAGCTTTATAATCCTGTTACAAAGAAGACGATCGTAAGCAGAGATGTTGTGTTTGATGAAGAAGCATCATGGAATTGGAATGACGAACCAGAAGATTACAATTTTGTGTTTTTTCCCGACGAACGTGATGAGCCTAGTGACATTGCTTCTCCACCAACATCGCCAATCACTCCACAACAAAGCACATCTTCATCATCTGCAAGTTCAAGTGAAGGGCCTCGTGGCATGAGAAGCTTACAAGACATATATGATGAAACTGAAGAGTTAAGTCAAAGTTTTAATAACCTTACTCTTTTTTGTCTATTTGGTGACAGTGAACCTTTGAATTTTGAAGAAGCTTCGCAAAATGACAAATGGAAGATTGCTATGGATGAAGAGATAAAAGCCATAAAAAAGAATGATACGTGGGAACTTTCTACTCTTCCAAATGGAAAGAAAGCAGTAGGTGTCAAATGGGTGTTCAAGATAAAAAGAAATGAAAAGGGAGAAGTGGAGAGATACAAAGCAAGATTAGTTGCAAAAGGATATTCTCAAAGAAAAGGCATTGATTATGATGAAGTATTTGCTCCCGTTGCTCGTTTGGAAACCATAAGGTTGTTAATTGCTCTTGCTGCACAAAATAATTGGAAGATCTTTCAGATGGATGTCAAATCGGCATTTTTGAATGGATATCTAGAAGAAGAAGTCTACTTGGAACAACCTCCTGGTTATTCTGTGAAAGGCCAAGAGGATAAAGTTCTAAAATTGAAGAAGGCATTATACGGATTGAAACAAGCACCAAGAATGTGGAATAGCAGAATCAACAAATATTTCCTTGATAATGGGTATTTGAGGTGTCCTTATGAACATTCTCTTTATATTAAGGTTAATGGTCATGGAGATATTTTGGTAGTTTGTTTGTACGTGGATGACTTAATTTTTACAGGAAATTGTGCAAGTATGTTTGAAGATCTCAAGAAGGCGATGACCCAAGAATTTGAAATGACAGATATAGGGCTAATGTCATATTATCTTGGCATTGAAGTGAAGCAGTCAGAGGAAGGAATTTTCATCTCTCAAGAACGATATACTAGAGAAATTCTAGAGAAGTTCAATATGATGAATTCTAAGCCTGTCGCAACTCCGATTGAAACTGGGACCAAACTGTCCAAACATGAAGAAGGAGATGATGTTGATCCTTCATATTTCAAAAGTTTGGTTGGGAGTTTGAGATATTTGACTTGCACACGACCAGATATTCTTTTCAGCGTTGGATTGGTGAGTCGATTTATGGAATCTCCTACAACTACTCATTTGAAAGTGGCAAAGAGAATTCTTCGTTACCTCAGAGGTACGCTTGACTATGGGTTGTTTTATTCTTCATCTAAAGAATTCAAGCTTGAAGGCTATTGTGATAGTGACTGGGCTGGAGATACTAATGATCGAAAGAGCACTAGTGGATATGTTTTCTTCATTGGCAATACTGCATTTACATGGAGTTCTAAGAAGCAACCTATTGTGACATTATCCACTTGTGAGGCAGAATACGTTGCTGCAGCTTCATGTGTTTGTCATGCAGTTTGGTTAAGAAATTTGTTAAAGACAGTTGGAATTTTGCAAGAAGATCCAACTGTGATTCATATAGACAATAAGTCAACAATTGCTTTAGCAAAGAATCCTGTGTTCCATGATCGTAGCAAACACATTGATACAAGATTTCACTTCATCAGAGATTGCATTTCAAGGAAGGAAGTTCAAGTTGAATATGTGAAGACTGAAGATCAAATTGCAGATATTTTTACGAAGCCACTCAAAGTTAATGTGTTTAACAACTTAAGAACTTTGCTTGGAGTTTTTCAAAACAAAAAAACATGTTTAAGGGAGGATGTTGAAAATTAA

Protein sequence

MANNNLVPFQVPRLTKENYSSWCIRMKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQNTRKKDQKALTIIHQAIDDNNFEKISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNEMKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKKNKQMTEQLFQSKLKLKDKEGNLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFDESNSNSNSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNKVEENANYAEKDEESGDSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCVENGIRRTMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYNFVFFPDERDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKKAMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSLVGSLRYLTCTRPDILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVWLRNLLKTVGILQEDPTVIHIDNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRKEVQVEYVKTEDQIADIFTKPLKVNVFNNLRTLLGVFQNKKTCLREDVEN

Homology

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BLAST of IVF0004335 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 736.1 bits (1899), Expect = 7.2e-211
Identity = 473/1403 (33.71%), Postives = 752/1403 (53.60%), Query Frame = 0


Query: 7    VPFQVPRLTKEN-YSSWCIRMKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQNTRK 66
            V ++V +   +N +S+W  RM+ LL  Q +  ++    ++P++  A + A          
Sbjct: 4    VKYEVAKFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAEDWAD--------- 63

Query: 67   KDQKALTIIHQAIDDNNFEKISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGDYESLH 126
             D++A + I   + D+    I    TA   W  LE+ Y       K+ L+K      +LH
Sbjct: 64   LDERAASAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKK---QLYALH 123

Query: 127  MKESESVSDYTSRLLAVVNEMKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLST 186
            M E  +   + +    ++ ++   G  I +E     +L SL   ++ +   I   K  +T
Sbjct: 124  MSEGTNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGK--TT 183

Query: 187  MSIDQLMGSLQAHEEKLLKKNKQMTEQLFQSKLKLKDKEGNLEKGNRGRGRGGNRGRGDF 246
            + +  +  +L  + EK+ KK +   + L                           GRG  
Sbjct: 184  IELKDVTSALLLN-EKMRKKPENQGQALI------------------------TEGRG-- 243

Query: 247  KDRGQGSYGQRKFDESNSNSNSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGH 306
                      R +  S++N   S  RG+            +  R   R   CYNC++ GH
Sbjct: 244  ----------RSYQRSSNNYGRSGARGK------------SKNRSKSRVRNCYNCNQPGH 303

Query: 307  YSWECRN-KVEENANYAEKDEES------GDSSLFLACKGAETC-----ENSAWYLDSGA 366
            +  +C N +  +     +K++++       + ++ L     E C       S W +D+ A
Sbjct: 304  FKRDCPNPRKGKGETSGQKNDDNTAAMVQNNDNVVLFINEEEECMHLSGPESEWVVDTAA 363

Query: 367  SNHMCGSKSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMK 426
            S+H    + +F        G +  G+ +   + G G I I    G    + +V +VP+++
Sbjct: 364  SHHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDLR 423

Query: 427  NNILSLGQLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKSCL 486
             N++S   L   GY     +    +      +IAK  + +  ++  N   ++ Q   +  
Sbjct: 424  MNLISGIALDRDGYESYFANQKWRLTKG-SLVIAK-GVARGTLYRTN--AEICQGELNAA 483

Query: 487  KDPNWI--WHLRFGHLNFDGLRLLARKNMVKGLPYVK-LPDQLCEGCLHGKQSRKSFPQE 546
            +D   +  WH R GH++  GL++LA+K+++    Y K    + C+ CL GKQ R SF Q 
Sbjct: 484  QDEISVDLWHKRMGHMSEKGLQILAKKSLIS---YAKGTTVKPCDYCLFGKQHRVSF-QT 543

Query: 547  SSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRF 606
            SS R    L+LV++D+CGP++  S G N YF+ FIDD SRK WVY +K K +VF +F++F
Sbjct: 544  SSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKF 603

Query: 607  KALVEKESGYYIKALRSDRGGEFTSNEFKTFCVENGIRRTMTVPFTPQQNGVVERKNRTI 666
             ALVE+E+G  +K LRSD GGE+TS EF+ +C  +GIR   TVP TPQ NGV ER NRTI
Sbjct: 604  HALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTI 663

Query: 667  LNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFG 726
            +   RSML+  K+PK FW +AV+ A YL NRSP+  L  + P++ WT ++ S  HL+VFG
Sbjct: 664  VEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFG 723

Query: 727  CMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVFDEEASWNW 786
            C A+AH+P ++R+KLDDKS   +F+GY     GY+L++PV KK I SRDVVF E      
Sbjct: 724  CRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESEVRTA 783

Query: 787  NDEPEDYNFVFFPDERDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDE- 846
             D  E       P+    PS   +P     T  +ST+   +   E P  +    +  DE 
Sbjct: 784  ADMSEKVKNGIIPNFVTIPSTSNNP-----TSAESTTDEVSEQGEQPGEVIEQGEQLDEG 843

Query: 847  TEEL----------------------SQSFNNLTLFCLFGDSEPLNFEEA---SQNDKWK 906
             EE+                      S+ + +     +  D EP + +E     + ++  
Sbjct: 844  VEEVEHPTQGEEQHQPLRRSERPRVESRRYPSTEYVLISDDREPESLKEVLSHPEKNQLM 903

Query: 907  IAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRK 966
             AM EE+++++KN T++L  LP GK+ +  KWVFK+K++   ++ RYKARLV KG+ Q+K
Sbjct: 904  KAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKK 963

Query: 967  GIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVK 1026
            GID+DE+F+PV ++ +IR +++LAA  + ++ Q+DVK+AFL+G LEEE+Y+EQP G+ V 
Sbjct: 964  GIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVA 1023

Query: 1027 GQEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCL 1086
            G++  V KL K+LYGLKQAPR W  + + +     YL+   +  +Y K     + +++ L
Sbjct: 1024 GKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLL 1083

Query: 1087 YVDDLIFTGNCASMFEDLKKAMTQEFEMTDIGLMSYYLGIEV--KQSEEGIFISQERYTR 1146
            YVDD++  G    +   LK  +++ F+M D+G     LG+++  +++   +++SQE+Y  
Sbjct: 1084 YVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIE 1143

Query: 1147 EILEKFNMMNSKPVATPIETGTKLSKH------EEGDDVDPSYFKSLVGSLRY-LTCTRP 1206
             +LE+FNM N+KPV+TP+    KLSK       EE  ++    + S VGSL Y + CTRP
Sbjct: 1144 RVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRP 1203

Query: 1207 DILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFKLEGYCDSDWAGD 1266
            DI  +VG+VSRF+E+P   H +  K ILRYLRGT    L +  S    L+GY D+D AGD
Sbjct: 1204 DIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPI-LKGYTDADMAGD 1263

Query: 1267 TNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVWLRNLLKTVGI 1326
             ++RKS++GY+F     A +W SK Q  V LST EAEY+AA       +WL+  L+ +G+
Sbjct: 1264 IDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGL 1323

Query: 1327 LQEDPTVIHIDNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRKEVQVEYVKTEDQIAD 1359
             Q++  V++ D++S I L+KN ++H R+KHID R+H+IR+ +  + ++V  + T +  AD
Sbjct: 1324 HQKE-YVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPAD 1328

[Close]

BLAST of IVF0004335 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 632.9 bits (1631), Expect = 8.6e-180
Identity = 468/1488 (31.45%), Postives = 720/1488 (48.39%), Query Frame = 0


Query: 2    ANNNLVPFQVPRLTKENYSSWCIRMKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQ 61
            A  N+ PF       E Y+ W  R++ALL  QDV  +V +G    E D +  +A+R A  
Sbjct: 4    AKRNIKPFD-----GEKYAIWKFRIRALLAEQDVLKVV-DGLMPNEVDDSWKKAERCAKS 63

Query: 62   NTRKKDQKALTIIHQAIDDNNFEKISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGDY 121
                      TII    D      ++ AT+   A QILEN     +R        LR   
Sbjct: 64   ----------TIIEYLSD----SFLNFATSDITARQILENLDAVYERKSLASQLALRKRL 123

Query: 122  ESLHMKESESVSDYTSRLLAVVNEMKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESK 181
             SL +    S+  +      +++E+   G  I +   +  +L +L   ++ I+ AIE   
Sbjct: 124  LSLKLSSEMSLLSHFHIFDELISELLAAGAKIEEMDKISHLLITLPSCYDGIITAIETLS 183

Query: 182  DLSTMSIDQLMGSLQAHEEKLLKKNKQMTEQLFQSKLKLKDKEGNLEKGNRGRGRGGNRG 241
            +   +++  +   L   E K+   +   ++++  +   +     N  K N          
Sbjct: 184  E-ENLTLAFVKNRLLDQEIKIKNDHNDTSKKVMNA---IVHNNNNTYKNNL--------- 243

Query: 242  RGDFKDRGQGSYGQRKFDESNSNSNSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNCH 301
               FK+R       +K  + NS                            K +V+C++C 
Sbjct: 244  ---FKNR---VTKPKKIFKGNS----------------------------KYKVKCHHCG 303

Query: 302  KFGHYSWEC-------RNKVEENANYAEKDEESGDSSLFLACKGAETCENSAWYLDSGAS 361
            + GH   +C        NK +EN    +     G + +          +N  + LDSGAS
Sbjct: 304  REGHIKKDCFHYKRILNNKNKENEKQVQTATSHGIAFMVKEVNNTSVMDNCGFVLDSGAS 363

Query: 362  NHMCGSKSMFIELDESVGGDIVFGDATKIPVKGKGKI-------LINLKNGKHEFISNVY 421
            +H+   +S++ +  E V          KI V  +G+        ++ L+N     + +V 
Sbjct: 364  DHLINDESLYTDSVEVV-------PPLKIAVAKQGEFIYATKRGIVRLRNDHEITLEDVL 423

Query: 422  YVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQ 481
            +      N++S+ +L E G +I      + I  N   ++    M  N + ++N Q   A 
Sbjct: 424  FCKEAAGNLMSVKRLQEAGMSIEFDKSGVTISKNGLMVVKNSGML-NNVPVINFQ---AY 483

Query: 482  CLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKG---LPYVKLPDQLCEGCLHGKQSR 541
             + +  K+   +WH RFGH++   L  + RKNM      L  ++L  ++CE CL+GKQ+R
Sbjct: 484  SINAKHKNNFRLWHERFGHISDGKLLEIKRKNMFSDQSLLNNLELSCEICEPCLNGKQAR 543

Query: 542  KSFPQ-ESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEV 601
              F Q +     +RPL +VH+D+CGPI P +    NYF++F+D F+     Y +K KS+V
Sbjct: 544  LPFKQLKDKTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDV 603

Query: 602  FGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCVENGIRRTMTVPFTPQQNGVV 661
            F MF+ F A  E      +  L  D G E+ SNE + FCV+ GI   +TVP TPQ NGV 
Sbjct: 604  FSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVS 663

Query: 662  ERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSL--WNKTPQQAWTGRKP 721
            ER  RTI   AR+M+   K+ K FW +AV  A YL NR P+R+L   +KTP + W  +KP
Sbjct: 664  ERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKP 723

Query: 722  SIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVV 781
             + HLRVFG   Y HI + K+ K DDKS K +FVGY+ +  G+KL++ V +K IV+RDVV
Sbjct: 724  YLKHLRVFGATVYVHIKN-KQGKFDDKSFKSIFVGYEPN--GFKLWDAVNEKFIVARDVV 783

Query: 782  FDE-------------------EASWNWN-----------------------------DE 841
             DE                   + S N N                              E
Sbjct: 784  VDETNMVNSRAVKFETVFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKE 843

Query: 842  PEDYNF---------VFFPDERDEPSDIASPPTSPIT----------------------- 901
             E+ NF           FP+E  E  +I     S  +                       
Sbjct: 844  SENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESNKYFLNESKKRKRDDHLNESKGS 903

Query: 902  --PQQSTSSSSAS-----SSEGPRGMRSLQDIYDETEELSQ----SFNN---------LT 961
              P +S  S +A        + P     ++ I   +E L      S+N          L 
Sbjct: 904  GNPNESRESETAEHLKEIGIDNPTKNDGIEIINRRSERLKTKPQISYNEEDNSLNKVVLN 963

Query: 962  LFCLFGDSEPLNFEEASQND---KWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVF 1021
               +F D  P +F+E    D    W+ A++ E+ A K N+TW ++  P  K  V  +WVF
Sbjct: 964  AHTIFND-VPNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVF 1023

Query: 1022 KIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQM 1081
             +K NE G   RYKARLVA+G++Q+  IDY+E FAPVAR+ + R +++L  Q N K+ QM
Sbjct: 1024 SVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQM 1083

Query: 1082 DVKSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKALYGLKQAPRMWNSRINKYFLDN 1141
            DVK+AFLNG L+EE+Y+  P G S     D V KL KA+YGLKQA R W     +   + 
Sbjct: 1084 DVKTAFLNGTLKEEIYMRLPQGISC--NSDNVCKLNKAIYGLKQAARCWFEVFEQALKEC 1143

Query: 1142 GYLRCPYEHSLYIKVNGH-GDILVVCLYVDDLIFTGNCASMFEDLKKAMTQEFEMTDIGL 1201
             ++    +  +YI   G+  + + V LYVDD++      +   + K+ + ++F MTD+  
Sbjct: 1144 EFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNE 1203

Query: 1202 MSYYLGIEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDDVDP 1261
            + +++GI ++  E+ I++SQ  Y ++IL KFNM N   V+TP+ +          +D + 
Sbjct: 1204 IKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNSDEDCN- 1263

Query: 1262 SYFKSLVGSLRY-LTCTRPDILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLFY 1321
            +  +SL+G L Y + CTRPD+  +V ++SR+     +   +  KR+LRYL+GT+D  L +
Sbjct: 1264 TPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIF 1323

Query: 1322 SSSKEF--KLEGYCDSDWAGDTNDRKSTSGYVF-FIGNTAFTWSSKKQPIVTLSTCEAEY 1362
              +  F  K+ GY DSDWAG   DRKST+GY+F         W++K+Q  V  S+ EAEY
Sbjct: 1324 KKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEY 1383

[Close]

BLAST of IVF0004335 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 580.5 bits (1495), Expect = 5.1e-164
Identity = 442/1487 (29.72%), Postives = 691/1487 (46.47%), Query Frame = 0


Query: 11   VPRLTKENYSSWCIRMKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQNTRKKDQKA 70
            V +LT  NY  W  ++ AL    ++   +      P +    + A R     TR K Q  
Sbjct: 23   VTKLTSTNYLMWSRQVHALFDGYELAGFLDGSTTMPPATIGTDAAPRVNPDYTRWKRQDK 82

Query: 71   L--TIIHQAIDDNNFEKISGATTAYQAWQILENTY--KGVDRVKKVRLQKLRGDYESLHM 130
            L  + +  AI  +    +S ATTA Q W+ L   Y       V ++R Q  +        
Sbjct: 83   LIYSAVLGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQ------WT 142

Query: 131  KESESVSDYTSRLLAVVNEMKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTM 190
            K ++++ DY   L+   +++   G+ +  ++ VE++L +L E++  ++  I  +KD +  
Sbjct: 143  KGTKTIDDYMQGLVTRFDQLALLGKPMDHDEQVERVLENLPEEYKPVIDQI-AAKD-TPP 202

Query: 191  SIDQLMGSLQAHEEKLLKKNKQMTEQLFQSKLKLKDKEGNLEKGNRGRGRGGNRGRGDFK 250
            ++ ++   L  HE K+L  +      +  + +  ++        N      GNR      
Sbjct: 203  TLTEIHERLLNHESKILAVSSATVIPITANAVSHRNTTTTNNNNN------GNR------ 262

Query: 251  DRGQGSYGQRKFDESNSNSNSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHY 310
                      ++D  N+N+NS      + + +SS     N+ +      +C  C   GH 
Sbjct: 263  --------NNRYDNRNNNNNS------KPWQQSSTNFHPNNNQSKPYLGKCQICGVQGHS 322

Query: 311  SWECRNKVEENANYAEKDEESGDSSLFLACK-------GAETCENSAWYLDSGASNHMCG 370
            +  C     +  ++          S F   +       G+    N+ W LDSGA++H+  
Sbjct: 323  AKRC----SQLQHFLSSVNSQQPPSPFTPWQPRANLALGSPYSSNN-WLLDSGATHHITS 382

Query: 371  S-KSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILS 430
               ++ +    + G D++  D + IP+   G   ++ K+ +   + N+ YVPN+  N++S
Sbjct: 383  DFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKS-RPLNLHNILYVPNIHKNLIS 442

Query: 431  LGQLLE-KGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTD--VAQCLKSCLKD 490
            + +L    G ++     S  ++D +  +      TK+ ++   I +   V+       K 
Sbjct: 443  VYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQPVSLFASPSSKA 502

Query: 491  PNWIWHLRFGHLNFDGLRLLARKNMVKGL-PYVKLPDQLCEGCLHGKQSRKSFPQESSWR 550
             +  WH R GH     L  +     +  L P  K     C  CL  K ++  F Q S+  
Sbjct: 503  THSSWHARLGHPAPSILNSVISNYSLSVLNPSHKFLS--CSDCLINKSNKVPFSQ-STIN 562

Query: 551  ARRPLELVHTDL-CGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKAL 610
            + RPLE +++D+   PI   S     Y+++F+D F+R TW+Y +K+KS+V   F  FK L
Sbjct: 563  STRPLEYIYSDVWSSPI--LSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNL 622

Query: 611  VEKESGYYIKALRSDRGGEFTSNEFKTFCVENGIRRTMTVPFTPQQNGVVERKNRTILNM 670
            +E      I    SD GGEF +     +  ++GI    + P TP+ NG+ ERK+R I+  
Sbjct: 623  LENRFQTRIGTFYSDNGGEFVA--LWEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVET 682

Query: 671  ARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMA 730
              ++L    +PK +W  A   AVYL NR PT  L  ++P Q   G  P+   LRVFGC  
Sbjct: 683  GLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCAC 742

Query: 731  YAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVFDE--------- 790
            Y  +    + KLDDKS + VF+GY  +   Y   +  T +  +SR V FDE         
Sbjct: 743  YPWLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYISRHVRFDENCFPFSNYL 802

Query: 791  -----------EASWNWNDE---PEDYNFVFFPDERDEPSDIASPPTSPITP-------- 850
                       E+S  W+     P     +  P   D P   A+PP+SP  P        
Sbjct: 803  ATLSPVQEQRRESSCVWSPHTTLPTRTPVLPAPSCSD-PHHAATPPSSPSAPFRNSQVSS 862

Query: 851  ---------------------------------------------------------QQS 910
                                                                      QS
Sbjct: 863  SNLDSSFSSSFPSSPEPTAPRQNGPQPTTQPTQTQTQTHSSQNTSQNNPTNESPSQLAQS 922

Query: 911  TSSSSASSSEGPRGMRSLQD----------IYDETEELSQSFNN---------------- 970
             S+ + SSS  P    S             +      L+Q  NN                
Sbjct: 923  LSTPAQSSSSSPSPTTSASSSSTSPTPPSILIHPPPPLAQIVNNNNQAPLNTHSMGTRAK 982

Query: 971  ----------LTLFCLFGDSEPLNFEEASQNDKWKIAMDEEIKAIKKNDTWEL-STLPNG 1030
                           L  +SEP    +A ++++W+ AM  EI A   N TW+L    P+ 
Sbjct: 983  AGIIKPNPKYSLAVSLAAESEPRTAIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSH 1042

Query: 1031 KKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALA 1090
               VG +W+F  K N  G + RYKARLVAKGY+QR G+DY E F+PV +  +IR+++ +A
Sbjct: 1043 VTIVGCRWIFTKKYNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVA 1102

Query: 1091 AQNNWKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKALYGLKQAPRMWN 1150
               +W I Q+DV +AFL G L ++VY+ QPPG+  K + + V KL+KALYGLKQAPR W 
Sbjct: 1103 VDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWY 1162

Query: 1151 SRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKKAMTQ 1210
              +  Y L  G++    + SL++   G   I+ + +YVDD++ TGN  ++  +    ++Q
Sbjct: 1163 VELRNYLLTIGFVNSVSDTSLFVLQRGK-SIVYMLVYVDDILITGNDPTLLHNTLDNLSQ 1222

Query: 1211 EFEMTDIGLMSYYLGIEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSK 1270
             F + D   + Y+LGIE K+   G+ +SQ RY  ++L + NM+ +KPV TP+    KLS 
Sbjct: 1223 RFSVKDHEELHYFLGIEAKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSL 1282

Query: 1271 HEEGDDVDPSYFKSLVGSLRYLTCTRPDILFSVGLVSRFMESPTTTHLKVAKRILRYLRG 1330
            +      DP+ ++ +VGSL+YL  TRPDI ++V  +S+FM  PT  HL+  KRILRYL G
Sbjct: 1283 YSGTKLTDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAG 1342

Query: 1331 TLDYGLFYSSSKEFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLST 1356
            T ++G+F        L  Y D+DWAGD +D  ST+GY+ ++G+   +WSSKKQ  V  S+
Sbjct: 1343 TPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSS 1402

[Close]

BLAST of IVF0004335 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 580.1 bits (1494), Expect = 6.6e-164
Identity = 440/1503 (29.27%), Postives = 690/1503 (45.91%), Query Frame = 0


Query: 11   VPRLTKENYSSWCIRMKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQNT--RKKDQ 70
            V +LT  NY  W  ++ AL    ++   +      P +    +   R     T  R++D+
Sbjct: 23   VTKLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPPATIGTDAVPRVNPDYTRWRRQDK 82

Query: 71   KALTIIHQAIDDNNFEKISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGDYESLHMKE 130
               + I  AI  +    +S ATTA Q W+ L   Y         +L              
Sbjct: 83   LIYSAILGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQL-------------- 142

Query: 131  SESVSDYTSRLLAVVNEMKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSI 190
                     R +   +++   G+ +  ++ VE++L +L + +  ++  I  +KD +  S+
Sbjct: 143  ---------RFITRFDQLALLGKPMDHDEQVERVLENLPDDYKPVIDQI-AAKD-TPPSL 202

Query: 191  DQLMGSLQAHEEKLLKKNKQMTEQLFQSKLKLKDKEGNLEKGNRGRGRGGNRGRGDFKDR 250
             ++   L   E KLL  N      +  + +  ++   N  + NRG               
Sbjct: 203  TEIHERLINRESKLLALNSAEVVPITANVVTHRNTNTNRNQNNRG--------------- 262

Query: 251  GQGSYGQRKFDESNSNSNSSRGRGRQHYSRSSWERSNNDRRYDKRQVE-----CYNCHKF 310
                      D  N N+N++R         +SW+ S++  R D RQ +     C  C   
Sbjct: 263  ----------DNRNYNNNNNRS--------NSWQPSSSGSRSDNRQPKPYLGRCQICSVQ 322

Query: 311  GHYSWECRNKVEENANYAEKDEES----GDSSLFLACKGAETCENSAWYLDSGASNHMCG 370
            GH +  C    +  +   ++   S          LA        N  W LDSGA++H+  
Sbjct: 323  GHSAKRCPQLHQFQSTTNQQQSTSPFTPWQPRANLAVNSPYNANN--WLLDSGATHHITS 382

Query: 371  S-KSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILS 430
               ++      + G D++  D + IP+   G   +   +   + ++ V YVPN+  N++S
Sbjct: 383  DFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASLPTSSRSLD-LNKVLYVPNIHKNLIS 442

Query: 431  LGQLLEKG-YNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTD--VAQCLKSCLKD 490
            + +L      ++     S  ++D +  +      TK+ ++   I +   V+     C K 
Sbjct: 443  VYRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKA 502

Query: 491  PNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQL--CEGCLHGKQSRKSFPQESSW 550
             +  WH R GH     L +L        LP +    +L  C  C   K  +  F   S+ 
Sbjct: 503  THSSWHSRLGH---PSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPF-SNSTI 562

Query: 551  RARRPLELVHTDL-CGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKA 610
             + +PLE +++D+   PI   S     Y+++F+D F+R TW+Y +K+KS+V   F  FK+
Sbjct: 563  TSSKPLEYIYSDVWSSPI--LSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKS 622

Query: 611  LVEKESGYYIKALRSDRGGEFTSNEFKTFCVENGIRRTMTVPFTPQQNGVVERKNRTILN 670
            LVE      I  L SD GGEF     + +  ++GI    + P TP+ NG+ ERK+R I+ 
Sbjct: 623  LVENRFQTRIGTLYSDNGGEFV--VLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVE 682

Query: 671  MARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCM 730
            M  ++L    +PK +W  A   AVYL NR PT  L  ++P Q   G+ P+   L+VFGC 
Sbjct: 683  MGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCA 742

Query: 731  AYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVFDE-------- 790
             Y  +    R KL+DKS++  F+GY  +   Y   +  T +   SR V FDE        
Sbjct: 743  CYPWLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTT 802

Query: 791  ------------EASWNW------------------------------------------ 850
                        +++ NW                                          
Sbjct: 803  NFGVSTSQEQRSDSAPNWPSHTTLPTTPLVLPAPPCLGPHLDTSPRPPSSPSPLCTTQVS 862

Query: 851  -------------NDEP--EDYNFVFFPDERDEP-------------------------- 910
                         + EP    +N    P    +P                          
Sbjct: 863  SSNLPSSSISSPSSSEPTAPSHN---GPQPTAQPHQTQNSNSNSPILNNPNPNSPSPNSP 922

Query: 911  --------SDIASP----PTSPITPQQSTSSSSAS----------------SSEGPRGMR 970
                    S I+SP    P++ I+   S SSSS S                +++ P    
Sbjct: 923  NQNSPLPQSPISSPHIPTPSTSISEPNSPSSSSTSTPPLPPVLPAPPIIQVNAQAPVNTH 982

Query: 971  SLQD-IYDETEELSQSFNNLTLFCLFGDSEPLNFEEASQNDKWKIAMDEEIKAIKKNDTW 1030
            S+     D   + +Q ++  T   L  +SEP    +A ++D+W+ AM  EI A   N TW
Sbjct: 983  SMATRAKDGIRKPNQKYSYAT--SLAANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTW 1042

Query: 1031 EL-STLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLE 1090
            +L    P     VG +W+F  K N  G + RYKARLVAKGY+QR G+DY E F+PV +  
Sbjct: 1043 DLVPPPPPSVTIVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKST 1102

Query: 1091 TIRLLIALAAQNNWKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKALYG 1150
            +IR+++ +A   +W I Q+DV +AFL G L +EVY+ QPPG+  K + D V +L+KA+YG
Sbjct: 1103 SIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYG 1162

Query: 1151 LKQAPRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMF 1210
            LKQAPR W   +  Y L  G++    + SL++   G   I+ + +YVDD++ TGN   + 
Sbjct: 1163 LKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQRGR-SIIYMLVYVDDILITGNDTVLL 1222

Query: 1211 EDLKKAMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQERYTREILEKFNMMNSKPVATP 1270
            +    A++Q F + +   + Y+LGIE K+  +G+ +SQ RYT ++L + NM+ +KPVATP
Sbjct: 1223 KHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATP 1282

Query: 1271 IETGTKLSKHEEGDDVDPSYFKSLVGSLRYLTCTRPDILFSVGLVSRFMESPTTTHLKVA 1330
            + T  KL+ H      DP+ ++ +VGSL+YL  TRPD+ ++V  +S++M  PT  H    
Sbjct: 1283 MATSPKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNAL 1342

Query: 1331 KRILRYLRGTLDYGLFYSSSKEFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSK 1363
            KR+LRYL GT D+G+F        L  Y D+DWAGDT+D  ST+GY+ ++G+   +WSSK
Sbjct: 1343 KRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSK 1402

[Close]

BLAST of IVF0004335 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 2.3e-44
Identity = 87/226 (38.50%), Postives = 140/226 (61.95%), Query Frame = 0


Query: 1040 LVVCLYVDDLIFTGNCASMFEDLKKAMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQER 1099
            + + LYVDD++ TG+  ++   L   ++  F M D+G + Y+LGI++K    G+F+SQ +
Sbjct: 1    MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60

Query: 1100 YTREILEKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSLVGSLRYLTCTRPDILF 1159
            Y  +IL    M++ KP++TP+      S        DPS F+S+VG+L+YLT TRPDI +
Sbjct: 61   YAEQILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIVGALQYLTLTRPDISY 120

Query: 1160 SVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFKLEGYCDSDWAGDTNDR 1219
            +V +V + M  PT     + KR+LRY++GT+ +GL+   + +  ++ +CDSDWAG T+ R
Sbjct: 121  AVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTR 180

Query: 1220 KSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVW 1266
            +ST+G+  F+G    +WS+K+QP V+ S+ E EY A A       W
Sbjct: 181  RSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of IVF0004335 vs. ExPASy TrEMBL
Match: A0A5D3CTU3 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00790 PE=4 SV=1)

HSP 1 Score: 2721.4 bits (7053), Expect = 0.0e+00
Identity = 1356/1360 (99.71%), Postives = 1359/1360 (99.93%), Query Frame = 0


Query: 1    MANNNLVPFQVPRLTKENYSSWCIRMKALLGSQDVWDIVSNGYEEPESDAALNQAQREAL 60
            MANNNLVPFQVPRLTKENYSSWCIRMKALLGSQDVWDIVSNGYEEPESDAALNQAQREAL
Sbjct: 1    MANNNLVPFQVPRLTKENYSSWCIRMKALLGSQDVWDIVSNGYEEPESDAALNQAQREAL 60

Query: 61   QNTRKKDQKALTIIHQAIDDNNFEKISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGD 120
            QNTRKKDQKALTIIHQAIDDNNFEKISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGD
Sbjct: 61   QNTRKKDQKALTIIHQAIDDNNFEKISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGD 120

Query: 121  YESLHMKESESVSDYTSRLLAVVNEMKRFGETISDEQVVEKILRSLDEKFNFIVVAIEES 180
            YESLHMKESESVSDYTSRLLAVVNEMKRFGETISDEQVVEKILRSLDEKFNFIVVAIEES
Sbjct: 121  YESLHMKESESVSDYTSRLLAVVNEMKRFGETISDEQVVEKILRSLDEKFNFIVVAIEES 180

Query: 181  KDLSTMSIDQLMGSLQAHEEKLLKKNKQMTEQLFQSKLKLKDKEGNLEKGNRGRGRGGNR 240
            KDLSTMSIDQLMGSLQAHEEKLLKKNKQMTEQLFQSKLKLKDKEG+LEKGNRGRGRGGNR
Sbjct: 181  KDLSTMSIDQLMGSLQAHEEKLLKKNKQMTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNR 240

Query: 241  GRGDFKDRGQGSYGQRKFDESNSNSNSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNC 300
            GRGDFKDRGQGSYGQRKFDESNSNSNSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNC
Sbjct: 241  GRGDFKDRGQGSYGQRKFDESNSNSNSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNC 300

Query: 301  HKFGHYSWECRNKVEENANYAEKDEESGDSSLFLACKGAETCENSAWYLDSGASNHMCGS 360
            HKFGHYSWECRN+VEENANYAEKDEESGDSSLFLACKGAETCENSAWYLDSGASNHMCGS
Sbjct: 301  HKFGHYSWECRNRVEENANYAEKDEESGDSSLFLACKGAETCENSAWYLDSGASNHMCGS 360

Query: 361  KSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLG 420
            KSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLG
Sbjct: 361  KSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLG 420

Query: 421  QLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIW 480
            QLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIW
Sbjct: 421  QLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIW 480

Query: 481  HLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLE 540
            HLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLE
Sbjct: 481  HLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLE 540

Query: 541  LVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGY 600
            LVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGY
Sbjct: 541  LVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGY 600

Query: 601  YIKALRSDRGGEFTSNEFKTFCVENGIRRTMTVPFTPQQNGVVERKNRTILNMARSMLKC 660
            YIKALRSDRGGEFTSNEFKTFCVENGIRRTMTVPFTPQQNGVVERKNRTILNMARSMLKC
Sbjct: 601  YIKALRSDRGGEFTSNEFKTFCVENGIRRTMTVPFTPQQNGVVERKNRTILNMARSMLKC 660

Query: 661  KKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQ 720
            KKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQ
Sbjct: 661  KKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQ 720

Query: 721  KRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYNFV 780
            KRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVFDEEASWNWNDEPEDY F+
Sbjct: 721  KRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKFL 780

Query: 781  FFPDERDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNL 840
            FFPDERDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNL
Sbjct: 781  FFPDERDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNL 840

Query: 841  TLFCLFGDSEPLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKI 900
            TLFCLFGDSEPLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKI
Sbjct: 841  TLFCLFGDSEPLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKI 900

Query: 901  KRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDV 960
            KRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDV
Sbjct: 901  KRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDV 960

Query: 961  KSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGY 1020
            KSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGY
Sbjct: 961  KSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGY 1020

Query: 1021 LRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKKAMTQEFEMTDIGLMSY 1080
            LRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKKAMTQEFEMTDIGLMSY
Sbjct: 1021 LRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKKAMTQEFEMTDIGLMSY 1080

Query: 1081 YLGIEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYF 1140
            YLGIEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYF
Sbjct: 1081 YLGIEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYF 1140

Query: 1141 KSLVGSLRYLTCTRPDILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSK 1200
            KSLVGSLRYLTCTRPDILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSK
Sbjct: 1141 KSLVGSLRYLTCTRPDILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSK 1200

Query: 1201 EFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCV 1260
            EFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCV
Sbjct: 1201 EFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCV 1260

Query: 1261 CHAVWLRNLLKTVGILQEDPTVIHIDNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRK 1320
            CHAVWLRNLLKTVGILQEDPTVIHIDNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRK
Sbjct: 1261 CHAVWLRNLLKTVGILQEDPTVIHIDNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRK 1320

Query: 1321 EVQVEYVKTEDQIADIFTKPLKVNVFNNLRTLLGVFQNKK 1361
            EVQVEYVKTEDQIADIFTKPLKVNVFNNLRTLLGVFQNKK
Sbjct: 1321 EVQVEYVKTEDQIADIFTKPLKVNVFNNLRTLLGVFQNKK 1360

[Close]

BLAST of IVF0004335 vs. ExPASy TrEMBL
Match: A0A5A7V277 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold154G00740 PE=4 SV=1)

HSP 1 Score: 2689.4 bits (6970), Expect = 0.0e+00
Identity = 1339/1360 (98.46%), Postives = 1349/1360 (99.19%), Query Frame = 0


Query: 1    MANNNLVPFQVPRLTKENYSSWCIRMKALLGSQDVWDIVSNGYEEPESDAALNQAQREAL 60
            MANNNLVPFQVPRLTKENYSSWCIRMKALLGSQDVWDIVSNGYEEPESDAALNQAQREAL
Sbjct: 1    MANNNLVPFQVPRLTKENYSSWCIRMKALLGSQDVWDIVSNGYEEPESDAALNQAQREAL 60

Query: 61   QNTRKKDQKALTIIHQAIDDNNFEKISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGD 120
            QNTRKKDQKALTIIHQAIDDNNFEKISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGD
Sbjct: 61   QNTRKKDQKALTIIHQAIDDNNFEKISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGD 120

Query: 121  YESLHMKESESVSDYTSRLLAVVNEMKRFGETISDEQVVEKILRSLDEKFNFIVVAIEES 180
            YESLHMKESESVSDYTSRLLAVVNEMKRFGETISDEQVVEKILRSLDEKFNFIVVAIEES
Sbjct: 121  YESLHMKESESVSDYTSRLLAVVNEMKRFGETISDEQVVEKILRSLDEKFNFIVVAIEES 180

Query: 181  KDLSTMSIDQLMGSLQAHEEKLLKKNKQMTEQLFQSKLKLKDKEGNLEKGNRGRGRGGNR 240
            KDLSTMSIDQLMGSLQAHEEKLLKKNKQMTEQLFQSKLKLKDKEG+LEKGNRGRGRGGNR
Sbjct: 181  KDLSTMSIDQLMGSLQAHEEKLLKKNKQMTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNR 240

Query: 241  GRGDFKDRGQGSYGQRKFDESNSNSNSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNC 300
            GRGDFKDRGQGSYGQRKFDESNSNSNSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNC
Sbjct: 241  GRGDFKDRGQGSYGQRKFDESNSNSNSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNC 300

Query: 301  HKFGHYSWECRNKVEENANYAEKDEESGDSSLFLACKGAETCENSAWYLDSGASNHMCGS 360
            HKFGHYSWECRN+VEENANYAEKDEESGDSSLFLACKGAETCENSAWYLDSGASNHMCGS
Sbjct: 301  HKFGHYSWECRNRVEENANYAEKDEESGDSSLFLACKGAETCENSAWYLDSGASNHMCGS 360

Query: 361  KSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLG 420
            KSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLG
Sbjct: 361  KSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLG 420

Query: 421  QLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIW 480
            QLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIW
Sbjct: 421  QLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIW 480

Query: 481  HLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLE 540
            HLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLE
Sbjct: 481  HLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLE 540

Query: 541  LVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGY 600
            LVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGY
Sbjct: 541  LVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGY 600

Query: 601  YIKALRSDRGGEFTSNEFKTFCVENGIRRTMTVPFTPQQNGVVERKNRTILNMARSMLKC 660
            YIKALRSDRGGEFTSNEFKTFCVENGIRRTMTVPFTPQ  GVVERKNRTILNMARSMLKC
Sbjct: 601  YIKALRSDRGGEFTSNEFKTFCVENGIRRTMTVPFTPQLIGVVERKNRTILNMARSMLKC 660

Query: 661  KKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQ 720
            KKMPKEFWAQAVECAVYLSNRSPTRSLWNKT QQAWTGRKPSIGHLRVFGCMAYAHIPDQ
Sbjct: 661  KKMPKEFWAQAVECAVYLSNRSPTRSLWNKTSQQAWTGRKPSIGHLRVFGCMAYAHIPDQ 720

Query: 721  KRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYNFV 780
            KRSKLDDKSEKYVFVGYDASSKGYKLYNP+TKKTI+SRDVVFDEEASWNWNDE EDY F+
Sbjct: 721  KRSKLDDKSEKYVFVGYDASSKGYKLYNPITKKTIISRDVVFDEEASWNWNDESEDYKFL 780

Query: 781  FFPDERDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNL 840
             FPD+RDEPSDIASPPTSPITPQQSTSSSSASSSEGPR MRSLQDIYDETEELSQ+FNNL
Sbjct: 781  CFPDDRDEPSDIASPPTSPITPQQSTSSSSASSSEGPRDMRSLQDIYDETEELSQNFNNL 840

Query: 841  TLFCLFGDSEPLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKI 900
            TLFCLFGDSEPLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKI
Sbjct: 841  TLFCLFGDSEPLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKI 900

Query: 901  KRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDV 960
            KRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDV
Sbjct: 901  KRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDV 960

Query: 961  KSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGY 1020
            KSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGY
Sbjct: 961  KSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGY 1020

Query: 1021 LRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKKAMTQEFEMTDIGLMSY 1080
            LRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNC SMFEDLKKAMTQEFEMTDIGLMSY
Sbjct: 1021 LRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCVSMFEDLKKAMTQEFEMTDIGLMSY 1080

Query: 1081 YLGIEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYF 1140
            YLGIEVKQSEEGIFISQERY RE+LEKFNMMNSKP+ATPIETGTKLSKHEEGDDVDPSYF
Sbjct: 1081 YLGIEVKQSEEGIFISQERYIREVLEKFNMMNSKPIATPIETGTKLSKHEEGDDVDPSYF 1140

Query: 1141 KSLVGSLRYLTCTRPDILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSK 1200
            KSLVGSLRYLTCTRPDILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSK
Sbjct: 1141 KSLVGSLRYLTCTRPDILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSK 1200

Query: 1201 EFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCV 1260
            EFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCV
Sbjct: 1201 EFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCV 1260

Query: 1261 CHAVWLRNLLKTVGILQEDPTVIHIDNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRK 1320
            CHAVWLRNLLKTVGILQEDPTVIH+DNKS IALAKN VFHDRSKHIDTRFHFIRDCISRK
Sbjct: 1261 CHAVWLRNLLKTVGILQEDPTVIHVDNKSAIALAKNLVFHDRSKHIDTRFHFIRDCISRK 1320

Query: 1321 EVQVEYVKTEDQIADIFTKPLKVNVFNNLRTLLGVFQNKK 1361
            EVQVEYVKTEDQIADIFTKPLKVNVFNNLRTLLGVFQNKK
Sbjct: 1321 EVQVEYVKTEDQIADIFTKPLKVNVFNNLRTLLGVFQNKK 1360

[Close]

BLAST of IVF0004335 vs. ExPASy TrEMBL
Match: A0A5A7U3F3 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00420 PE=4 SV=1)

HSP 1 Score: 2671.7 bits (6924), Expect = 0.0e+00
Identity = 1334/1344 (99.26%), Postives = 1337/1344 (99.48%), Query Frame = 0


Query: 26   MKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQNTRKKDQKALTIIHQAIDDNNFEK 85
            MKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQNTRKKDQKALTIIHQAIDDNNFEK
Sbjct: 1    MKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQNTRKKDQKALTIIHQAIDDNNFEK 60

Query: 86   ISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNE 145
            ISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNE
Sbjct: 61   ISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNE 120

Query: 146  MKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKK 205
            MKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKK
Sbjct: 121  MKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKK 180

Query: 206  NKQMTEQLFQSKLKLKDKEGNLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFDESNSNS 265
            NKQMTEQLFQSKLKLKDKEG+LEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFDESNSNS
Sbjct: 181  NKQMTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFDESNSNS 240

Query: 266  NSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNKVEENANYAEKDE 325
            NSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRN+VEENANYAEKDE
Sbjct: 241  NSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNRVEENANYAEKDE 300

Query: 326  ESGDSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFIELDESVGGDIVFGDATKIPV 385
            ESGDSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFIELDESVGGDIVFGDATKIPV
Sbjct: 301  ESGDSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFIELDESVGGDIVFGDATKIPV 360

Query: 386  KGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKI 445
            KGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKI
Sbjct: 361  KGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKI 420

Query: 446  IAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLP 505
            IAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLP
Sbjct: 421  IAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLP 480

Query: 506  YVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFI 565
            YVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFI
Sbjct: 481  YVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFI 540

Query: 566  DDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCVEN 625
            DDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCVEN
Sbjct: 541  DDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCVEN 600

Query: 626  GIRRTMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTR 685
            GIRRTMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTR
Sbjct: 601  GIRRTMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTR 660

Query: 686  SLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYK 745
            SLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYK
Sbjct: 661  SLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYK 720

Query: 746  LYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYNFVFFPDERDEPSDIASPPTSPITPQQS 805
            LYNPVTKKTIVSRDVVFDEEASWNWNDEPEDY F+ FPDE DEPSDIASPPTSPITPQQS
Sbjct: 721  LYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKFLCFPDEHDEPSDIASPPTSPITPQQS 780

Query: 806  TSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEEASQNDKWKI 865
            TSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLF DSEPLNFEEASQNDKWKI
Sbjct: 781  TSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFADSEPLNFEEASQNDKWKI 840

Query: 866  AMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKG 925
            AMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKG
Sbjct: 841  AMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKG 900

Query: 926  IDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKG 985
            IDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFLNGYL EEVYLEQPPGYSVKG
Sbjct: 901  IDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFLNGYLVEEVYLEQPPGYSVKG 960

Query: 986  QEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLY 1045
            QEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLY
Sbjct: 961  QEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLY 1020

Query: 1046 VDDLIFTGNCASMFEDLKKAMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQERYTREIL 1105
            VDDLIFTGNCASMFEDLKKAMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQERYTREIL
Sbjct: 1021 VDDLIFTGNCASMFEDLKKAMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQERYTREIL 1080

Query: 1106 EKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSLVGSLRYLTCTRPDILFSVGLVS 1165
            EKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSLVGSLRYLTCTRPDILFSVGLVS
Sbjct: 1081 EKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSLVGSLRYLTCTRPDILFSVGLVS 1140

Query: 1166 RFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFKLEGYCDSDWAGDTNDRKSTSGY 1225
            RFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFKLEGYCDSDWAGDTNDRKSTSGY
Sbjct: 1141 RFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFKLEGYCDSDWAGDTNDRKSTSGY 1200

Query: 1226 VFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVWLRNLLKTVGILQEDPTVIHI 1285
            VFFIGNTAFTWSSKKQPIVTLSTCEAEYVA ASCVCHAVWLRNLLKTV ILQEDPTVIHI
Sbjct: 1201 VFFIGNTAFTWSSKKQPIVTLSTCEAEYVATASCVCHAVWLRNLLKTVEILQEDPTVIHI 1260

Query: 1286 DNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRKEVQVEYVKTEDQIADIFTKPLKVNV 1345
            DNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRKEVQVEYVKTEDQIADIFTKPLKVNV
Sbjct: 1261 DNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRKEVQVEYVKTEDQIADIFTKPLKVNV 1320

Query: 1346 FNNLRTLLGVFQNKKTCLREDVEN 1370
            FNNLRTLLGVFQNKKTCLREDVEN
Sbjct: 1321 FNNLRTLLGVFQNKKTCLREDVEN 1344

[Close]

BLAST of IVF0004335 vs. ExPASy TrEMBL
Match: A0A5D3C639 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G002010 PE=4 SV=1)

HSP 1 Score: 2667.1 bits (6912), Expect = 0.0e+00
Identity = 1331/1335 (99.70%), Postives = 1334/1335 (99.93%), Query Frame = 0


Query: 26   MKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQNTRKKDQKALTIIHQAIDDNNFEK 85
            MKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQNTRKKDQKALTIIHQAIDDNNFEK
Sbjct: 1    MKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQNTRKKDQKALTIIHQAIDDNNFEK 60

Query: 86   ISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNE 145
            ISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNE
Sbjct: 61   ISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNE 120

Query: 146  MKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKK 205
            MKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKK
Sbjct: 121  MKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKK 180

Query: 206  NKQMTEQLFQSKLKLKDKEGNLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFDESNSNS 265
            NKQMTEQLFQSKLKLKDKEG+LEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFDESNSNS
Sbjct: 181  NKQMTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFDESNSNS 240

Query: 266  NSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNKVEENANYAEKDE 325
            NSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRN+VEENANYAEKDE
Sbjct: 241  NSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNRVEENANYAEKDE 300

Query: 326  ESGDSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFIELDESVGGDIVFGDATKIPV 385
            ESGDSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFIELDESVGGDIVFGDATKIPV
Sbjct: 301  ESGDSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFIELDESVGGDIVFGDATKIPV 360

Query: 386  KGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKI 445
            KGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKI
Sbjct: 361  KGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKI 420

Query: 446  IAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLP 505
            IAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLP
Sbjct: 421  IAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLP 480

Query: 506  YVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFI 565
            YVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFI
Sbjct: 481  YVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFI 540

Query: 566  DDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCVEN 625
            DDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCVEN
Sbjct: 541  DDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCVEN 600

Query: 626  GIRRTMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTR 685
            GIRRTMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTR
Sbjct: 601  GIRRTMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTR 660

Query: 686  SLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYK 745
            SLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYK
Sbjct: 661  SLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYK 720

Query: 746  LYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYNFVFFPDERDEPSDIASPPTSPITPQQS 805
            LYNPVTKKTIVSRDVVFDEEASWNWNDEPEDY F+FFPDERDEPSDIASPPTSPITPQQS
Sbjct: 721  LYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDERDEPSDIASPPTSPITPQQS 780

Query: 806  TSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEEASQNDKWKI 865
            TSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEEASQNDKWKI
Sbjct: 781  TSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEEASQNDKWKI 840

Query: 866  AMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKG 925
            AMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKG
Sbjct: 841  AMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKG 900

Query: 926  IDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKG 985
            IDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKG
Sbjct: 901  IDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKG 960

Query: 986  QEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLY 1045
            QEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLY
Sbjct: 961  QEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLY 1020

Query: 1046 VDDLIFTGNCASMFEDLKKAMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQERYTREIL 1105
            VDDLIFTGNCASMFEDLKKAMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQERYTREIL
Sbjct: 1021 VDDLIFTGNCASMFEDLKKAMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQERYTREIL 1080

Query: 1106 EKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSLVGSLRYLTCTRPDILFSVGLVS 1165
            EKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSLVGSLRYLTCTRPDILFSVGLVS
Sbjct: 1081 EKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSLVGSLRYLTCTRPDILFSVGLVS 1140

Query: 1166 RFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFKLEGYCDSDWAGDTNDRKSTSGY 1225
            RFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFKLEGYCDSDWAGDTNDRKSTSGY
Sbjct: 1141 RFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFKLEGYCDSDWAGDTNDRKSTSGY 1200

Query: 1226 VFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVWLRNLLKTVGILQEDPTVIHI 1285
            VFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVWLRNLLKTVGILQEDPTVIHI
Sbjct: 1201 VFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVWLRNLLKTVGILQEDPTVIHI 1260

Query: 1286 DNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRKEVQVEYVKTEDQIADIFTKPLKVNV 1345
            DNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRKEVQVEYVKTEDQIADIFTKPLKVNV
Sbjct: 1261 DNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRKEVQVEYVKTEDQIADIFTKPLKVNV 1320

Query: 1346 FNNLRTLLGVFQNKK 1361
            FNNLRTLLGVFQNKK
Sbjct: 1321 FNNLRTLLGVFQNKK 1335

[Close]

BLAST of IVF0004335 vs. ExPASy TrEMBL
Match: A0A5D3D497 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00810 PE=4 SV=1)

HSP 1 Score: 2664.8 bits (6906), Expect = 0.0e+00
Identity = 1330/1335 (99.63%), Postives = 1333/1335 (99.85%), Query Frame = 0


Query: 26   MKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQNTRKKDQKALTIIHQAIDDNNFEK 85
            MKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQNTRKKDQKALTIIHQAIDDNNFEK
Sbjct: 1    MKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQNTRKKDQKALTIIHQAIDDNNFEK 60

Query: 86   ISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNE 145
            ISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNE
Sbjct: 61   ISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNE 120

Query: 146  MKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKK 205
            MKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKK
Sbjct: 121  MKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKK 180

Query: 206  NKQMTEQLFQSKLKLKDKEGNLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFDESNSNS 265
            NKQMTEQLFQSKLKLKDKEG+LEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFDESNSNS
Sbjct: 181  NKQMTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFDESNSNS 240

Query: 266  NSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNKVEENANYAEKDE 325
            NSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRN+VEENANYAEKDE
Sbjct: 241  NSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNRVEENANYAEKDE 300

Query: 326  ESGDSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFIELDESVGGDIVFGDATKIPV 385
            ESGDSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFIELDESVGGDIVFGDATKIPV
Sbjct: 301  ESGDSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFIELDESVGGDIVFGDATKIPV 360

Query: 386  KGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKI 445
            KGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKI
Sbjct: 361  KGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKI 420

Query: 446  IAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLP 505
            IAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLP
Sbjct: 421  IAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLP 480

Query: 506  YVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFI 565
            YVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFI
Sbjct: 481  YVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFI 540

Query: 566  DDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCVEN 625
            DDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCVEN
Sbjct: 541  DDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCVEN 600

Query: 626  GIRRTMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTR 685
            GIRRTMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTR
Sbjct: 601  GIRRTMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTR 660

Query: 686  SLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYK 745
            SLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYK
Sbjct: 661  SLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYK 720

Query: 746  LYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYNFVFFPDERDEPSDIASPPTSPITPQQS 805
            LYNPVTKKTIVSRDVVFDEEASWNWNDEPEDY F+FFPDERDEPSDIASPPTSPITPQQS
Sbjct: 721  LYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDERDEPSDIASPPTSPITPQQS 780

Query: 806  TSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEEASQNDKWKI 865
            TSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLF DSEPLNFEEASQNDKWKI
Sbjct: 781  TSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFADSEPLNFEEASQNDKWKI 840

Query: 866  AMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKG 925
            AMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKG
Sbjct: 841  AMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKG 900

Query: 926  IDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKG 985
            IDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKG
Sbjct: 901  IDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKG 960

Query: 986  QEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLY 1045
            QEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLY
Sbjct: 961  QEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLY 1020

Query: 1046 VDDLIFTGNCASMFEDLKKAMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQERYTREIL 1105
            VDDLIFTGNCASMFEDLKKAMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQERYTREIL
Sbjct: 1021 VDDLIFTGNCASMFEDLKKAMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQERYTREIL 1080

Query: 1106 EKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSLVGSLRYLTCTRPDILFSVGLVS 1165
            EKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSLVGSLRYLTCTRPDILFSVGLVS
Sbjct: 1081 EKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSLVGSLRYLTCTRPDILFSVGLVS 1140

Query: 1166 RFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFKLEGYCDSDWAGDTNDRKSTSGY 1225
            RFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFKLEGYCDSDWAGDTNDRKSTSGY
Sbjct: 1141 RFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFKLEGYCDSDWAGDTNDRKSTSGY 1200

Query: 1226 VFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVWLRNLLKTVGILQEDPTVIHI 1285
            VFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVWLRNLLKTVGILQEDPTVIHI
Sbjct: 1201 VFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVWLRNLLKTVGILQEDPTVIHI 1260

Query: 1286 DNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRKEVQVEYVKTEDQIADIFTKPLKVNV 1345
            DNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRKEVQVEYVKTEDQIADIFTKPLKVNV
Sbjct: 1261 DNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRKEVQVEYVKTEDQIADIFTKPLKVNV 1320

Query: 1346 FNNLRTLLGVFQNKK 1361
            FNNLRTLLGVFQNKK
Sbjct: 1321 FNNLRTLLGVFQNKK 1335

[Close]

BLAST of IVF0004335 vs. NCBI nr
Match: TYK13816.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 2722 bits (7055), Expect = 0.0
Identity = 1356/1360 (99.71%), Postives = 1359/1360 (99.93%), Query Frame = 0


Query: 1    MANNNLVPFQVPRLTKENYSSWCIRMKALLGSQDVWDIVSNGYEEPESDAALNQAQREAL 60
            MANNNLVPFQVPRLTKENYSSWCIRMKALLGSQDVWDIVSNGYEEPESDAALNQAQREAL
Sbjct: 1    MANNNLVPFQVPRLTKENYSSWCIRMKALLGSQDVWDIVSNGYEEPESDAALNQAQREAL 60

Query: 61   QNTRKKDQKALTIIHQAIDDNNFEKISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGD 120
            QNTRKKDQKALTIIHQAIDDNNFEKISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGD
Sbjct: 61   QNTRKKDQKALTIIHQAIDDNNFEKISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGD 120

Query: 121  YESLHMKESESVSDYTSRLLAVVNEMKRFGETISDEQVVEKILRSLDEKFNFIVVAIEES 180
            YESLHMKESESVSDYTSRLLAVVNEMKRFGETISDEQVVEKILRSLDEKFNFIVVAIEES
Sbjct: 121  YESLHMKESESVSDYTSRLLAVVNEMKRFGETISDEQVVEKILRSLDEKFNFIVVAIEES 180

Query: 181  KDLSTMSIDQLMGSLQAHEEKLLKKNKQMTEQLFQSKLKLKDKEGNLEKGNRGRGRGGNR 240
            KDLSTMSIDQLMGSLQAHEEKLLKKNKQMTEQLFQSKLKLKDKEG+LEKGNRGRGRGGNR
Sbjct: 181  KDLSTMSIDQLMGSLQAHEEKLLKKNKQMTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNR 240

Query: 241  GRGDFKDRGQGSYGQRKFDESNSNSNSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNC 300
            GRGDFKDRGQGSYGQRKFDESNSNSNSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNC
Sbjct: 241  GRGDFKDRGQGSYGQRKFDESNSNSNSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNC 300

Query: 301  HKFGHYSWECRNKVEENANYAEKDEESGDSSLFLACKGAETCENSAWYLDSGASNHMCGS 360
            HKFGHYSWECRN+VEENANYAEKDEESGDSSLFLACKGAETCENSAWYLDSGASNHMCGS
Sbjct: 301  HKFGHYSWECRNRVEENANYAEKDEESGDSSLFLACKGAETCENSAWYLDSGASNHMCGS 360

Query: 361  KSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLG 420
            KSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLG
Sbjct: 361  KSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLG 420

Query: 421  QLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIW 480
            QLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIW
Sbjct: 421  QLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIW 480

Query: 481  HLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLE 540
            HLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLE
Sbjct: 481  HLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLE 540

Query: 541  LVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGY 600
            LVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGY
Sbjct: 541  LVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGY 600

Query: 601  YIKALRSDRGGEFTSNEFKTFCVENGIRRTMTVPFTPQQNGVVERKNRTILNMARSMLKC 660
            YIKALRSDRGGEFTSNEFKTFCVENGIRRTMTVPFTPQQNGVVERKNRTILNMARSMLKC
Sbjct: 601  YIKALRSDRGGEFTSNEFKTFCVENGIRRTMTVPFTPQQNGVVERKNRTILNMARSMLKC 660

Query: 661  KKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQ 720
            KKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQ
Sbjct: 661  KKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQ 720

Query: 721  KRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYNFV 780
            KRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVFDEEASWNWNDEPEDY F+
Sbjct: 721  KRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKFL 780

Query: 781  FFPDERDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNL 840
            FFPDERDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNL
Sbjct: 781  FFPDERDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNL 840

Query: 841  TLFCLFGDSEPLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKI 900
            TLFCLFGDSEPLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKI
Sbjct: 841  TLFCLFGDSEPLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKI 900

Query: 901  KRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDV 960
            KRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDV
Sbjct: 901  KRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDV 960

Query: 961  KSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGY 1020
            KSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGY
Sbjct: 961  KSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGY 1020

Query: 1021 LRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKKAMTQEFEMTDIGLMSY 1080
            LRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKKAMTQEFEMTDIGLMSY
Sbjct: 1021 LRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKKAMTQEFEMTDIGLMSY 1080

Query: 1081 YLGIEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYF 1140
            YLGIEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYF
Sbjct: 1081 YLGIEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYF 1140

Query: 1141 KSLVGSLRYLTCTRPDILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSK 1200
            KSLVGSLRYLTCTRPDILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSK
Sbjct: 1141 KSLVGSLRYLTCTRPDILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSK 1200

Query: 1201 EFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCV 1260
            EFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCV
Sbjct: 1201 EFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCV 1260

Query: 1261 CHAVWLRNLLKTVGILQEDPTVIHIDNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRK 1320
            CHAVWLRNLLKTVGILQEDPTVIHIDNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRK
Sbjct: 1261 CHAVWLRNLLKTVGILQEDPTVIHIDNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRK 1320

Query: 1321 EVQVEYVKTEDQIADIFTKPLKVNVFNNLRTLLGVFQNKK 1360
            EVQVEYVKTEDQIADIFTKPLKVNVFNNLRTLLGVFQNKK
Sbjct: 1321 EVQVEYVKTEDQIADIFTKPLKVNVFNNLRTLLGVFQNKK 1360

[Close]

BLAST of IVF0004335 vs. NCBI nr
Match: KAA0062322.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 2690 bits (6972), Expect = 0.0
Identity = 1339/1360 (98.46%), Postives = 1349/1360 (99.19%), Query Frame = 0


Query: 1    MANNNLVPFQVPRLTKENYSSWCIRMKALLGSQDVWDIVSNGYEEPESDAALNQAQREAL 60
            MANNNLVPFQVPRLTKENYSSWCIRMKALLGSQDVWDIVSNGYEEPESDAALNQAQREAL
Sbjct: 1    MANNNLVPFQVPRLTKENYSSWCIRMKALLGSQDVWDIVSNGYEEPESDAALNQAQREAL 60

Query: 61   QNTRKKDQKALTIIHQAIDDNNFEKISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGD 120
            QNTRKKDQKALTIIHQAIDDNNFEKISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGD
Sbjct: 61   QNTRKKDQKALTIIHQAIDDNNFEKISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGD 120

Query: 121  YESLHMKESESVSDYTSRLLAVVNEMKRFGETISDEQVVEKILRSLDEKFNFIVVAIEES 180
            YESLHMKESESVSDYTSRLLAVVNEMKRFGETISDEQVVEKILRSLDEKFNFIVVAIEES
Sbjct: 121  YESLHMKESESVSDYTSRLLAVVNEMKRFGETISDEQVVEKILRSLDEKFNFIVVAIEES 180

Query: 181  KDLSTMSIDQLMGSLQAHEEKLLKKNKQMTEQLFQSKLKLKDKEGNLEKGNRGRGRGGNR 240
            KDLSTMSIDQLMGSLQAHEEKLLKKNKQMTEQLFQSKLKLKDKEG+LEKGNRGRGRGGNR
Sbjct: 181  KDLSTMSIDQLMGSLQAHEEKLLKKNKQMTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNR 240

Query: 241  GRGDFKDRGQGSYGQRKFDESNSNSNSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNC 300
            GRGDFKDRGQGSYGQRKFDESNSNSNSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNC
Sbjct: 241  GRGDFKDRGQGSYGQRKFDESNSNSNSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNC 300

Query: 301  HKFGHYSWECRNKVEENANYAEKDEESGDSSLFLACKGAETCENSAWYLDSGASNHMCGS 360
            HKFGHYSWECRN+VEENANYAEKDEESGDSSLFLACKGAETCENSAWYLDSGASNHMCGS
Sbjct: 301  HKFGHYSWECRNRVEENANYAEKDEESGDSSLFLACKGAETCENSAWYLDSGASNHMCGS 360

Query: 361  KSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLG 420
            KSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLG
Sbjct: 361  KSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLG 420

Query: 421  QLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIW 480
            QLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIW
Sbjct: 421  QLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIW 480

Query: 481  HLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLE 540
            HLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLE
Sbjct: 481  HLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLE 540

Query: 541  LVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGY 600
            LVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGY
Sbjct: 541  LVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGY 600

Query: 601  YIKALRSDRGGEFTSNEFKTFCVENGIRRTMTVPFTPQQNGVVERKNRTILNMARSMLKC 660
            YIKALRSDRGGEFTSNEFKTFCVENGIRRTMTVPFTPQ  GVVERKNRTILNMARSMLKC
Sbjct: 601  YIKALRSDRGGEFTSNEFKTFCVENGIRRTMTVPFTPQLIGVVERKNRTILNMARSMLKC 660

Query: 661  KKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQ 720
            KKMPKEFWAQAVECAVYLSNRSPTRSLWNKT QQAWTGRKPSIGHLRVFGCMAYAHIPDQ
Sbjct: 661  KKMPKEFWAQAVECAVYLSNRSPTRSLWNKTSQQAWTGRKPSIGHLRVFGCMAYAHIPDQ 720

Query: 721  KRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYNFV 780
            KRSKLDDKSEKYVFVGYDASSKGYKLYNP+TKKTI+SRDVVFDEEASWNWNDE EDY F+
Sbjct: 721  KRSKLDDKSEKYVFVGYDASSKGYKLYNPITKKTIISRDVVFDEEASWNWNDESEDYKFL 780

Query: 781  FFPDERDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNL 840
             FPD+RDEPSDIASPPTSPITPQQSTSSSSASSSEGPR MRSLQDIYDETEELSQ+FNNL
Sbjct: 781  CFPDDRDEPSDIASPPTSPITPQQSTSSSSASSSEGPRDMRSLQDIYDETEELSQNFNNL 840

Query: 841  TLFCLFGDSEPLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKI 900
            TLFCLFGDSEPLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKI
Sbjct: 841  TLFCLFGDSEPLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKI 900

Query: 901  KRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDV 960
            KRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDV
Sbjct: 901  KRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDV 960

Query: 961  KSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGY 1020
            KSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGY
Sbjct: 961  KSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGY 1020

Query: 1021 LRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKKAMTQEFEMTDIGLMSY 1080
            LRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNC SMFEDLKKAMTQEFEMTDIGLMSY
Sbjct: 1021 LRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCVSMFEDLKKAMTQEFEMTDIGLMSY 1080

Query: 1081 YLGIEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYF 1140
            YLGIEVKQSEEGIFISQERY RE+LEKFNMMNSKP+ATPIETGTKLSKHEEGDDVDPSYF
Sbjct: 1081 YLGIEVKQSEEGIFISQERYIREVLEKFNMMNSKPIATPIETGTKLSKHEEGDDVDPSYF 1140

Query: 1141 KSLVGSLRYLTCTRPDILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSK 1200
            KSLVGSLRYLTCTRPDILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSK
Sbjct: 1141 KSLVGSLRYLTCTRPDILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSK 1200

Query: 1201 EFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCV 1260
            EFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCV
Sbjct: 1201 EFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCV 1260

Query: 1261 CHAVWLRNLLKTVGILQEDPTVIHIDNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRK 1320
            CHAVWLRNLLKTVGILQEDPTVIH+DNKS IALAKN VFHDRSKHIDTRFHFIRDCISRK
Sbjct: 1261 CHAVWLRNLLKTVGILQEDPTVIHVDNKSAIALAKNLVFHDRSKHIDTRFHFIRDCISRK 1320

Query: 1321 EVQVEYVKTEDQIADIFTKPLKVNVFNNLRTLLGVFQNKK 1360
            EVQVEYVKTEDQIADIFTKPLKVNVFNNLRTLLGVFQNKK
Sbjct: 1321 EVQVEYVKTEDQIADIFTKPLKVNVFNNLRTLLGVFQNKK 1360

[Close]

BLAST of IVF0004335 vs. NCBI nr
Match: KAA0047979.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 2672 bits (6927), Expect = 0.0
Identity = 1334/1344 (99.26%), Postives = 1337/1344 (99.48%), Query Frame = 0


Query: 26   MKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQNTRKKDQKALTIIHQAIDDNNFEK 85
            MKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQNTRKKDQKALTIIHQAIDDNNFEK
Sbjct: 1    MKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQNTRKKDQKALTIIHQAIDDNNFEK 60

Query: 86   ISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNE 145
            ISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNE
Sbjct: 61   ISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNE 120

Query: 146  MKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKK 205
            MKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKK
Sbjct: 121  MKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKK 180

Query: 206  NKQMTEQLFQSKLKLKDKEGNLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFDESNSNS 265
            NKQMTEQLFQSKLKLKDKEG+LEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFDESNSNS
Sbjct: 181  NKQMTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFDESNSNS 240

Query: 266  NSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNKVEENANYAEKDE 325
            NSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRN+VEENANYAEKDE
Sbjct: 241  NSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNRVEENANYAEKDE 300

Query: 326  ESGDSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFIELDESVGGDIVFGDATKIPV 385
            ESGDSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFIELDESVGGDIVFGDATKIPV
Sbjct: 301  ESGDSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFIELDESVGGDIVFGDATKIPV 360

Query: 386  KGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKI 445
            KGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKI
Sbjct: 361  KGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKI 420

Query: 446  IAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLP 505
            IAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLP
Sbjct: 421  IAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLP 480

Query: 506  YVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFI 565
            YVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFI
Sbjct: 481  YVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFI 540

Query: 566  DDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCVEN 625
            DDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCVEN
Sbjct: 541  DDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCVEN 600

Query: 626  GIRRTMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTR 685
            GIRRTMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTR
Sbjct: 601  GIRRTMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTR 660

Query: 686  SLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYK 745
            SLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYK
Sbjct: 661  SLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYK 720

Query: 746  LYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYNFVFFPDERDEPSDIASPPTSPITPQQS 805
            LYNPVTKKTIVSRDVVFDEEASWNWNDEPEDY F+ FPDE DEPSDIASPPTSPITPQQS
Sbjct: 721  LYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKFLCFPDEHDEPSDIASPPTSPITPQQS 780

Query: 806  TSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEEASQNDKWKI 865
            TSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLF DSEPLNFEEASQNDKWKI
Sbjct: 781  TSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFADSEPLNFEEASQNDKWKI 840

Query: 866  AMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKG 925
            AMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKG
Sbjct: 841  AMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKG 900

Query: 926  IDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKG 985
            IDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFLNGYL EEVYLEQPPGYSVKG
Sbjct: 901  IDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFLNGYLVEEVYLEQPPGYSVKG 960

Query: 986  QEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLY 1045
            QEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLY
Sbjct: 961  QEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLY 1020

Query: 1046 VDDLIFTGNCASMFEDLKKAMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQERYTREIL 1105
            VDDLIFTGNCASMFEDLKKAMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQERYTREIL
Sbjct: 1021 VDDLIFTGNCASMFEDLKKAMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQERYTREIL 1080

Query: 1106 EKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSLVGSLRYLTCTRPDILFSVGLVS 1165
            EKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSLVGSLRYLTCTRPDILFSVGLVS
Sbjct: 1081 EKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSLVGSLRYLTCTRPDILFSVGLVS 1140

Query: 1166 RFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFKLEGYCDSDWAGDTNDRKSTSGY 1225
            RFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFKLEGYCDSDWAGDTNDRKSTSGY
Sbjct: 1141 RFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFKLEGYCDSDWAGDTNDRKSTSGY 1200

Query: 1226 VFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVWLRNLLKTVGILQEDPTVIHI 1285
            VFFIGNTAFTWSSKKQPIVTLSTCEAEYVA ASCVCHAVWLRNLLKTV ILQEDPTVIHI
Sbjct: 1201 VFFIGNTAFTWSSKKQPIVTLSTCEAEYVATASCVCHAVWLRNLLKTVEILQEDPTVIHI 1260

Query: 1286 DNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRKEVQVEYVKTEDQIADIFTKPLKVNV 1345
            DNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRKEVQVEYVKTEDQIADIFTKPLKVNV
Sbjct: 1261 DNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRKEVQVEYVKTEDQIADIFTKPLKVNV 1320

Query: 1346 FNNLRTLLGVFQNKKTCLREDVEN 1369
            FNNLRTLLGVFQNKKTCLREDVEN
Sbjct: 1321 FNNLRTLLGVFQNKKTCLREDVEN 1344

[Close]

BLAST of IVF0004335 vs. NCBI nr
Match: TYK06895.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 2668 bits (6916), Expect = 0.0
Identity = 1331/1335 (99.70%), Postives = 1334/1335 (99.93%), Query Frame = 0


Query: 26   MKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQNTRKKDQKALTIIHQAIDDNNFEK 85
            MKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQNTRKKDQKALTIIHQAIDDNNFEK
Sbjct: 1    MKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQNTRKKDQKALTIIHQAIDDNNFEK 60

Query: 86   ISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNE 145
            ISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNE
Sbjct: 61   ISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNE 120

Query: 146  MKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKK 205
            MKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKK
Sbjct: 121  MKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKK 180

Query: 206  NKQMTEQLFQSKLKLKDKEGNLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFDESNSNS 265
            NKQMTEQLFQSKLKLKDKEG+LEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFDESNSNS
Sbjct: 181  NKQMTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFDESNSNS 240

Query: 266  NSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNKVEENANYAEKDE 325
            NSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRN+VEENANYAEKDE
Sbjct: 241  NSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNRVEENANYAEKDE 300

Query: 326  ESGDSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFIELDESVGGDIVFGDATKIPV 385
            ESGDSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFIELDESVGGDIVFGDATKIPV
Sbjct: 301  ESGDSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFIELDESVGGDIVFGDATKIPV 360

Query: 386  KGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKI 445
            KGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKI
Sbjct: 361  KGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKI 420

Query: 446  IAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLP 505
            IAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLP
Sbjct: 421  IAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLP 480

Query: 506  YVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFI 565
            YVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFI
Sbjct: 481  YVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFI 540

Query: 566  DDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCVEN 625
            DDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCVEN
Sbjct: 541  DDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCVEN 600

Query: 626  GIRRTMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTR 685
            GIRRTMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTR
Sbjct: 601  GIRRTMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTR 660

Query: 686  SLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYK 745
            SLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYK
Sbjct: 661  SLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYK 720

Query: 746  LYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYNFVFFPDERDEPSDIASPPTSPITPQQS 805
            LYNPVTKKTIVSRDVVFDEEASWNWNDEPEDY F+FFPDERDEPSDIASPPTSPITPQQS
Sbjct: 721  LYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDERDEPSDIASPPTSPITPQQS 780

Query: 806  TSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEEASQNDKWKI 865
            TSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEEASQNDKWKI
Sbjct: 781  TSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEEASQNDKWKI 840

Query: 866  AMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKG 925
            AMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKG
Sbjct: 841  AMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKG 900

Query: 926  IDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKG 985
            IDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKG
Sbjct: 901  IDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKG 960

Query: 986  QEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLY 1045
            QEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLY
Sbjct: 961  QEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLY 1020

Query: 1046 VDDLIFTGNCASMFEDLKKAMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQERYTREIL 1105
            VDDLIFTGNCASMFEDLKKAMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQERYTREIL
Sbjct: 1021 VDDLIFTGNCASMFEDLKKAMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQERYTREIL 1080

Query: 1106 EKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSLVGSLRYLTCTRPDILFSVGLVS 1165
            EKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSLVGSLRYLTCTRPDILFSVGLVS
Sbjct: 1081 EKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSLVGSLRYLTCTRPDILFSVGLVS 1140

Query: 1166 RFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFKLEGYCDSDWAGDTNDRKSTSGY 1225
            RFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFKLEGYCDSDWAGDTNDRKSTSGY
Sbjct: 1141 RFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFKLEGYCDSDWAGDTNDRKSTSGY 1200

Query: 1226 VFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVWLRNLLKTVGILQEDPTVIHI 1285
            VFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVWLRNLLKTVGILQEDPTVIHI
Sbjct: 1201 VFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVWLRNLLKTVGILQEDPTVIHI 1260

Query: 1286 DNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRKEVQVEYVKTEDQIADIFTKPLKVNV 1345
            DNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRKEVQVEYVKTEDQIADIFTKPLKVNV
Sbjct: 1261 DNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRKEVQVEYVKTEDQIADIFTKPLKVNV 1320

Query: 1346 FNNLRTLLGVFQNKK 1360
            FNNLRTLLGVFQNKK
Sbjct: 1321 FNNLRTLLGVFQNKK 1335

[Close]

BLAST of IVF0004335 vs. NCBI nr
Match: TYK18362.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 2666 bits (6910), Expect = 0.0
Identity = 1330/1335 (99.63%), Postives = 1333/1335 (99.85%), Query Frame = 0


Query: 26   MKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQNTRKKDQKALTIIHQAIDDNNFEK 85
            MKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQNTRKKDQKALTIIHQAIDDNNFEK
Sbjct: 1    MKALLGSQDVWDIVSNGYEEPESDAALNQAQREALQNTRKKDQKALTIIHQAIDDNNFEK 60

Query: 86   ISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNE 145
            ISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNE
Sbjct: 61   ISGATTAYQAWQILENTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNE 120

Query: 146  MKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKK 205
            MKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKK
Sbjct: 121  MKRFGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKK 180

Query: 206  NKQMTEQLFQSKLKLKDKEGNLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFDESNSNS 265
            NKQMTEQLFQSKLKLKDKEG+LEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFDESNSNS
Sbjct: 181  NKQMTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFDESNSNS 240

Query: 266  NSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNKVEENANYAEKDE 325
            NSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRN+VEENANYAEKDE
Sbjct: 241  NSSRGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNRVEENANYAEKDE 300

Query: 326  ESGDSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFIELDESVGGDIVFGDATKIPV 385
            ESGDSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFIELDESVGGDIVFGDATKIPV
Sbjct: 301  ESGDSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFIELDESVGGDIVFGDATKIPV 360

Query: 386  KGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKI 445
            KGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKI
Sbjct: 361  KGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKI 420

Query: 446  IAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLP 505
            IAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLP
Sbjct: 421  IAKVQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLP 480

Query: 506  YVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFI 565
            YVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFI
Sbjct: 481  YVKLPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFI 540

Query: 566  DDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCVEN 625
            DDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCVEN
Sbjct: 541  DDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCVEN 600

Query: 626  GIRRTMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTR 685
            GIRRTMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTR
Sbjct: 601  GIRRTMTVPFTPQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTR 660

Query: 686  SLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYK 745
            SLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYK
Sbjct: 661  SLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYK 720

Query: 746  LYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYNFVFFPDERDEPSDIASPPTSPITPQQS 805
            LYNPVTKKTIVSRDVVFDEEASWNWNDEPEDY F+FFPDERDEPSDIASPPTSPITPQQS
Sbjct: 721  LYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDERDEPSDIASPPTSPITPQQS 780

Query: 806  TSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEEASQNDKWKI 865
            TSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLF DSEPLNFEEASQNDKWKI
Sbjct: 781  TSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFADSEPLNFEEASQNDKWKI 840

Query: 866  AMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKG 925
            AMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKG
Sbjct: 841  AMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKG 900

Query: 926  IDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKG 985
            IDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKG
Sbjct: 901  IDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKG 960

Query: 986  QEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLY 1045
            QEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLY
Sbjct: 961  QEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLY 1020

Query: 1046 VDDLIFTGNCASMFEDLKKAMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQERYTREIL 1105
            VDDLIFTGNCASMFEDLKKAMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQERYTREIL
Sbjct: 1021 VDDLIFTGNCASMFEDLKKAMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQERYTREIL 1080

Query: 1106 EKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSLVGSLRYLTCTRPDILFSVGLVS 1165
            EKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSLVGSLRYLTCTRPDILFSVGLVS
Sbjct: 1081 EKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSLVGSLRYLTCTRPDILFSVGLVS 1140

Query: 1166 RFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFKLEGYCDSDWAGDTNDRKSTSGY 1225
            RFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFKLEGYCDSDWAGDTNDRKSTSGY
Sbjct: 1141 RFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFKLEGYCDSDWAGDTNDRKSTSGY 1200

Query: 1226 VFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVWLRNLLKTVGILQEDPTVIHI 1285
            VFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVWLRNLLKTVGILQEDPTVIHI
Sbjct: 1201 VFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVWLRNLLKTVGILQEDPTVIHI 1260

Query: 1286 DNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRKEVQVEYVKTEDQIADIFTKPLKVNV 1345
            DNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRKEVQVEYVKTEDQIADIFTKPLKVNV
Sbjct: 1261 DNKSTIALAKNPVFHDRSKHIDTRFHFIRDCISRKEVQVEYVKTEDQIADIFTKPLKVNV 1320

Query: 1346 FNNLRTLLGVFQNKK 1360
            FNNLRTLLGVFQNKK
Sbjct: 1321 FNNLRTLLGVFQNKK 1335

[Close]

BLAST of IVF0004335 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 381.3 bits (978), Expect = 3.2e-105
Identity = 189/493 (38.34%), Postives = 305/493 (61.87%), Query Frame = 0


Query: 827  YDETEELSQSFNNLTLFCLFGDSEPLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLP 886
            Y++   L  SF    L C+    EP  + EA +   W  AMD+EI A++   TWE+ TLP
Sbjct: 66   YEKVSPLYHSF----LVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLP 125

Query: 887  NGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIA 946
              KK +G KWV+KIK N  G +ERYKARLVAKGY+Q++GID+ E F+PV +L +++L++A
Sbjct: 126  PNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILA 185

Query: 947  LAAQNNWKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKGQE----DKVLKLKKALYGLKQ 1006
            ++A  N+ + Q+D+ +AFLNG L+EE+Y++ PPGY+ +  +    + V  LKK++YGLKQ
Sbjct: 186  ISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQ 245

Query: 1007 APRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDL 1066
            A R W  + +   +  G+++   +H+ ++K+      L V +YVDD+I   N  +  ++L
Sbjct: 246  ASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITA-TLFLCVLVYVDDIIICSNNDAAVDEL 305

Query: 1067 KKAMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIET 1126
            K  +   F++ D+G + Y+LG+E+ +S  GI I Q +Y  ++L++  ++  KP + P++ 
Sbjct: 306  KSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDP 365

Query: 1127 GTKLSKHEEGDDVDPSYFKSLVGSLRYLTCTRPDILFSVGLVSRFMESPTTTHLKVAKRI 1186
                S H  GD VD   ++ L+G L YL  TR DI F+V  +S+F E+P   H +   +I
Sbjct: 366  SVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKI 425

Query: 1187 LRYLRGTLDYGLFYSSSKEFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQP 1246
            L Y++GT+  GLFYSS  E +L+ + D+ +    + R+ST+GY  F+G +  +W SKKQ 
Sbjct: 426  LHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQ 485

Query: 1247 IVTLSTCEAEYVAAASCVCHAVWLRNLLKTVGILQEDPTVIHIDNKSTIALAKNPVFHDR 1306
            +V+ S+ EAEY A +      +WL    + + +    PT++  DN + I +A N VFH+R
Sbjct: 486  VVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHER 545

Query: 1307 SKHIDTRFHFIRD 1316
            +KHI++  H +R+
Sbjct: 546  TKHIESDCHSVRE 553

[Close]

BLAST of IVF0004335 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 183.0 bits (463), Expect = 1.7e-45
Identity = 87/226 (38.50%), Postives = 140/226 (61.95%), Query Frame = 0


Query: 1040 LVVCLYVDDLIFTGNCASMFEDLKKAMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQER 1099
            + + LYVDD++ TG+  ++   L   ++  F M D+G + Y+LGI++K    G+F+SQ +
Sbjct: 1    MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60

Query: 1100 YTREILEKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSLVGSLRYLTCTRPDILF 1159
            Y  +IL    M++ KP++TP+      S        DPS F+S+VG+L+YLT TRPDI +
Sbjct: 61   YAEQILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIVGALQYLTLTRPDISY 120

Query: 1160 SVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFKLEGYCDSDWAGDTNDR 1219
            +V +V + M  PT     + KR+LRY++GT+ +GL+   + +  ++ +CDSDWAG T+ R
Sbjct: 121  AVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTR 180

Query: 1220 KSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVW 1266
            +ST+G+  F+G    +WS+K+QP V+ S+ E EY A A       W
Sbjct: 181  RSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of IVF0004335 vs. TAIR 10
Match: AT1G48720.1 (unknown protein; Has 229 Blast hits to 229 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 228; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 112.1 bits (279), Expect = 3.6e-24
Identity = 50/92 (54.35%), Postives = 75/92 (81.52%), Query Frame = 0


Query: 1  MANNNLVPFQVPRLTKENYSSWCIRMKALLGSQDVWDIVSNGYEEPESDAALNQAQREAL 60
          MA+NN VPFQVP LTK NY +W +RMKA+LG+ DVW+IV  G+ EPE++ +L+Q Q++ L
Sbjct: 1  MASNN-VPFQVPVLTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGL 60

Query: 61 QNTRKKDQKALTIIHQAIDDNNFEKISGATTA 93
          +++RK+D+KAL +I+Q +D++ FEK+  AT+A
Sbjct: 61 RDSRKRDKKALCLIYQGLDEDTFEKVVEATSA 91

[Close]

BLAST of IVF0004335 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 82.8 bits (203), Expect = 2.3e-15
Identity = 43/101 (42.57%), Postives = 62/101 (61.39%), Query Frame = 0


Query: 850 EPLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVE 909
           EP +   A ++  W  AM EE+ A+ +N TW L   P  +  +G KWVFK K +  G ++
Sbjct: 27  EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD 86

Query: 910 RYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQ 951
           R KARLVAKG+ Q +GI + E ++PV R  TIR ++ +A Q
Sbjct: 87  RLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQQ 127

[Close]

BLAST of IVF0004335 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 73.9 bits (180), Expect = 1.1e-12
Identity = 30/77 (38.96%), Postives = 52/77 (67.53%), Query Frame = 0


Query: 1149 YLTCTRPDILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFKLEGYC 1208
            YLT TRPD+ F+V  +S+F  +  T  ++   ++L Y++GT+  GLFYS++ + +L+ + 
Sbjct: 2    YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFA 61

Query: 1209 DSDWAGDTNDRKSTSGY 1226
            DSDWA   + R+S +G+
Sbjct: 62   DSDWASCPDTRRSVTGF 78

The following BLAST results are available for this feature:

BLAST of IVF0004335 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	7.2e-211	33.71	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	8.6e-180	31.45	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q94HW2	5.1e-164	29.72	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	6.6e-164	29.27	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P92519	2.3e-44	38.50	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of IVF0004335 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CTU3	0.0e+00	99.71	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7V277	0.0e+00	98.46	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7U3F3	0.0e+00	99.26	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3C639	0.0e+00	99.70	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3D497	0.0e+00	99.63	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]

BLAST of IVF0004335 vs. NCBI nr


Match Name	Identity	Description
TYK13816.1	99.71	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0062322.1	98.46	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0047979.1	99.26	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYK06895.1	99.70	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYK18362.1	99.63	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]

BLAST of IVF0004335 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	3.2e-105	38.34	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	1.7e-45	38.50	DNA/RNA polymerases superfamily protein	[more]
AT1G48720.1	3.6e-24	54.35	unknown protein; Has 229 Blast hits to 229 proteins in 10 species: Archae - 0; B...	[more]
ATMG00820.1	2.3e-15	42.57	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]
ATMG00240.1	1.1e-12	38.96	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 188..208
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 64..202 e-value: 7.8E-28 score: 97.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 220..254
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 255..274
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 779..820
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 220..285
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 797..819
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 16..771 coord: 849..1233
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 1205..1341 e-value: 9.85626E-81 score: 259.323
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 296..312 e-value: 0.0049 score: 25.4
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 297..312 score: 9.108787
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 536..637 e-value: 1.4E-13 score: 51.0
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 534..700 score: 26.380743
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 467..522 e-value: 2.3E-12 score: 46.6
IPR025314	Domain of unknown function DUF4219	PFAM	PF13961	DUF4219	coord: 14..40 e-value: 5.3E-9 score: 35.6
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 530..726 e-value: 4.0E-47 score: 162.1
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 877..1120 e-value: 1.4E-89 score: 299.9
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 876..1311
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 537..709
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 281..315

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0004335.1	IVF0004335.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding