IVF0003791 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCACAGGGGAAGGAAGTTCCGGCGAACAGCTATGGCCACCTTGAAAGAGATTCTCACCAGACGACCCGTCTCTGCCACCATCAGGCTCACCGTCCCTGCCGGTGGAGCTCGCCCTGCGCCACCGGTGGGTCCAGCGCTGGGTCAATACCGGCTGAATCTGATGGCTTTCTGCAAGGATTTCAATGCCCGGACTCAAAAGTACAAACCTGACACACCCATGGCCGTAACCATTACAGCTTTCAAGGACAACACCTTCGAGTTCACCGTCAAATCACCGTCAGTCACTTGGTACTTGAAGAAAGCTGCCGGGATCGAATCTGGGAGCAGCCGCCCAGGCCACGTAGTCGCCTCCACGCTCTCAGTCAAGCACATTTATGAGATCGCCAAAGTCAAGCAATCTGATCCTTATTGCCAGTACATGCCACTAGAATCCATTTGTAAGTCCATTATCGGCACTGCCAATAGCATGGGAATTAAAGTCCTAAACGAATTAGAGTAATGCAACAGCTAAATTTCTAGGGTTTTTTTTCCTCTTATTGTTCTTCAGTATCTCGATTTAAATTGAGGGTTTTTTGCAGTGACCTACATCTTCTTACTGTGAATCAATGTTATTATTCCGTATGCTAAGTCGGCTATCTATTCCTGACAGCTTAAGTTTCTCTAAATTCGTTAGAAATTGAACCAATTCCAACGATTTGCTCCTGAATGTCAAGGAAATGGGGCAAGGATAATAGCTAAATAAAAGCTATCTTTCATCATTAGAGTTTGCTATGGAACCATGGCCATTCTGTGAGTTGTGAACTGATTTCATTTTGATGAACCAGTTAGTAATGAACTACCCTCCAATTCAATATCTCTGGTGCAAATTACTGAATTTGAT TCACAGGGGAAGGAAGTTCCGGCGAACAGCTATGGCCACCTTGAAAGAGATTCTCACCAGACGACCCGTCTCTGCCACCATCAGGCTCACCGTCCCTGCCGGTGGAGCTCGCCCTGCGCCACCGGTGGGTCCAGCGCTGGGTCAATACCGGCTGAATCTGATGGCTTTCTGCAAGGATTTCAATGCCCGGACTCAAAAGTACAAACCTGACACACCCATGGCCGTAACCATTACAGCTTTCAAGGACAACACCTTCGAGTTCACCGTCAAATCACCGTCAGTCACTTGGTACTTGAAGAAAGCTGCCGGGATCGAATCTGGGAGCAGCCGCCCAGGCCACGTAGTCGCCTCCACGCTCTCAGTCAAGCACATTTATGAGATCGCCAAAGTCAAGCAATCTGATCCTTATTGCCAGTACATGCCACTAGAATCCATTTGTAAGTCCATTATCGGCACTGCCAATAGCATGGGAATTAAAGTCCTAAACGAATTAGAGTAATGCAACAGCTAAATTTCTAGGGTTTTTTTTCCTCTTATTGTTCTTCAGTATCTCGATTTAAATTGAGGGTTTTTTGCAGTGACCTACATCTTCTTACTGTGAATCAATGTTATTATTCCGTATGCTAAGTCGGCTATCTATTCCTGACAGCTTAAGTTTCTCTAAATTCGTTAGAAATTGAACCAATTCCAACGATTTGCTCCTGAATGTCAAGGAAATGGGGCAAGGATAATAGCTAAATAAAAGCTATCTTTCATCATTAGAGTTTGCTATGGAACCATGGCCATTCTGTGAGTTGTGAACTGATTTCATTTTGATGAACCAGTTAGTAATGAACTACCCTCCAATTCAATATCTCTGGTGCAAATTACTGAATTTGAT ATGGCCACCTTGAAAGAGATTCTCACCAGACGACCCGTCTCTGCCACCATCAGGCTCACCGTCCCTGCCGGTGGAGCTCGCCCTGCGCCACCGGTGGGTCCAGCGCTGGGTCAATACCGGCTGAATCTGATGGCTTTCTGCAAGGATTTCAATGCCCGGACTCAAAAGTACAAACCTGACACACCCATGGCCGTAACCATTACAGCTTTCAAGGACAACACCTTCGAGTTCACCGTCAAATCACCGTCAGTCACTTGGTACTTGAAGAAAGCTGCCGGGATCGAATCTGGGAGCAGCCGCCCAGGCCACGTAGTCGCCTCCACGCTCTCAGTCAAGCACATTTATGAGATCGCCAAAGTCAAGCAATCTGATCCTTATTGCCAGTACATGCCACTAGAATCCATTTGTAAGTCCATTATCGGCACTGCCAATAGCATGGGAATTAAAGTCCTAAACGAATTAGAGTAA MATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE Homology
BLAST of IVF0003791 vs. ExPASy Swiss-Prot
Match: Q9UTK2 (54S ribosomal protein L19, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mrpl19 PE=3 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 2.8e-34 Identity = 70/135 (51.85%), Postives = 91/135 (67.41%), Query Frame = 0
BLAST of IVF0003791 vs. ExPASy Swiss-Prot
Match: Q07KJ7 (50S ribosomal protein L11 OS=Rhodopseudomonas palustris (strain BisA53) OX=316055 GN=rplK PE=3 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 1.6e-29 Identity = 65/140 (46.43%), Postives = 96/140 (68.57%), Query Frame = 0
BLAST of IVF0003791 vs. ExPASy Swiss-Prot
Match: O67758 (50S ribosomal protein L11 OS=Aquifex aeolicus (strain VF5) OX=224324 GN=rplK PE=3 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 3.5e-29 Identity = 66/140 (47.14%), Postives = 94/140 (67.14%), Query Frame = 0
BLAST of IVF0003791 vs. ExPASy Swiss-Prot
Match: A7HWQ0 (50S ribosomal protein L11 OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) OX=402881 GN=rplK PE=3 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 3.5e-29 Identity = 66/141 (46.81%), Postives = 90/141 (63.83%), Query Frame = 0
BLAST of IVF0003791 vs. ExPASy Swiss-Prot
Match: Q7VRP3 (50S ribosomal protein L11 OS=Blochmannia floridanus OX=203907 GN=rplK PE=3 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 5.9e-29 Identity = 65/148 (43.92%), Postives = 96/148 (64.86%), Query Frame = 0
BLAST of IVF0003791 vs. ExPASy TrEMBL
Match: A0A5A7T9U7 (54S ribosomal protein L19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G00710 PE=3 SV=1) HSP 1 Score: 311.6 bits (797), Expect = 1.8e-81 Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0
BLAST of IVF0003791 vs. ExPASy TrEMBL
Match: A0A1S3BMZ5 (54S ribosomal protein L19, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103491602 PE=3 SV=1) HSP 1 Score: 311.6 bits (797), Expect = 1.8e-81 Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0
BLAST of IVF0003791 vs. ExPASy TrEMBL
Match: A0A0A0KWT6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G279840 PE=3 SV=1) HSP 1 Score: 308.9 bits (790), Expect = 1.2e-80 Identity = 153/155 (98.71%), Postives = 155/155 (100.00%), Query Frame = 0
BLAST of IVF0003791 vs. ExPASy TrEMBL
Match: A0A6J1BU21 (54S ribosomal protein L19, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111005691 PE=3 SV=1) HSP 1 Score: 304.7 bits (779), Expect = 2.2e-79 Identity = 150/155 (96.77%), Postives = 154/155 (99.35%), Query Frame = 0
BLAST of IVF0003791 vs. ExPASy TrEMBL
Match: A0A6J1IPM9 (54S ribosomal protein L19, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111477675 PE=3 SV=1) HSP 1 Score: 300.8 bits (769), Expect = 3.2e-78 Identity = 147/155 (94.84%), Postives = 153/155 (98.71%), Query Frame = 0
BLAST of IVF0003791 vs. NCBI nr
Match: XP_008449842.1 (PREDICTED: 54S ribosomal protein L19, mitochondrial [Cucumis melo] >KAA0040080.1 54S ribosomal protein L19 [Cucumis melo var. makuwa] >TYK21704.1 54S ribosomal protein L19 [Cucumis melo var. makuwa]) HSP 1 Score: 309 bits (792), Expect = 4.11e-106 Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0
BLAST of IVF0003791 vs. NCBI nr
Match: XP_004142176.1 (54S ribosomal protein L19, mitochondrial [Cucumis sativus] >KGN54055.1 hypothetical protein Csa_018122 [Cucumis sativus]) HSP 1 Score: 306 bits (785), Expect = 4.81e-105 Identity = 153/155 (98.71%), Postives = 155/155 (100.00%), Query Frame = 0
BLAST of IVF0003791 vs. NCBI nr
Match: XP_038901904.1 (54S ribosomal protein L19, mitochondrial [Benincasa hispida]) HSP 1 Score: 305 bits (780), Expect = 2.78e-104 Identity = 152/155 (98.06%), Postives = 154/155 (99.35%), Query Frame = 0
BLAST of IVF0003791 vs. NCBI nr
Match: XP_022132985.1 (54S ribosomal protein L19, mitochondrial [Momordica charantia]) HSP 1 Score: 302 bits (774), Expect = 2.29e-103 Identity = 150/155 (96.77%), Postives = 154/155 (99.35%), Query Frame = 0
BLAST of IVF0003791 vs. NCBI nr
Match: KAG7034038.1 (mrpl19, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 301 bits (771), Expect = 6.56e-103 Identity = 149/155 (96.13%), Postives = 154/155 (99.35%), Query Frame = 0
BLAST of IVF0003791 vs. TAIR 10
Match: AT4G35490.1 (mitochondrial ribosomal protein L11 ) HSP 1 Score: 273.9 bits (699), Expect = 8.1e-74 Identity = 130/154 (84.42%), Postives = 147/154 (95.45%), Query Frame = 0
BLAST of IVF0003791 vs. TAIR 10
Match: AT1G32990.1 (plastid ribosomal protein l11 ) HSP 1 Score: 103.2 bits (256), Expect = 1.9e-22 Identity = 60/140 (42.86%), Postives = 80/140 (57.14%), Query Frame = 0
BLAST of IVF0003791 vs. TAIR 10
Match: AT5G51610.1 (Ribosomal protein L11 family protein ) HSP 1 Score: 52.4 bits (124), Expect = 3.8e-07 Identity = 26/79 (32.91%), Postives = 46/79 (58.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|