IVF0003780 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGGGAAAAAACGTCGGAAGAGGCATTCCCGATGCCGCGTCATGCGTCGGCATAAGGTCTTTTGAGAGAGAAACTCCCGATGCCACTTTGGTCGATGCATGTCACAGCGTCGGGAGAGGCATTTCCGACGCCTTGTTGGTACGGCGTCGGGAATGCCTCTTCCGATTCATGTCTCCCGACGTTGTTCCCGAGGTTGTGAAAAACGTTGGCATATCCTTTCCCAACGTTTTTGTGCGTCGGGAGTATCCTTGTCTCTTGCAGTGTTTGGAATTGTTGCCCATGTTTTGCAAATATATTAGTAAAGGATACCTACATTTAAACCATTTTCATGCAAAACACGAATGGAGGGAAGATCTTGGAGGGGTGGGGTAA ATGTCGGGAAAAAACGTCGGAAGAGGCATTCCCGATGCCGCGTCATGCGTCGGCATAAGGTCTTTTGAGAGAGAAACTCCCGATGCCACTTTGGTCGATGCATGTCACAGCGTCGGGAGAGGCATTTCCGACGCCTTGTTGGTACGGCGTCGGGAATGCCTCTTCCGATTCATGTCTCCCGACGTTGTTCCCGAGGTTGTGAAAAACGTTGGCATATCCTTTCCCAACGTTTTTGTGCGTCGGGAGTATCCTTGTCTCTTGCAGTGTTTGGAATTGTTGCCCATGTTTTGCAAATATATTAGTAAAGGATACCTACATTTAAACCATTTTCATGCAAAACACGAATGGAGGGAAGATCTTGGAGGGGTGGGGTAA ATGTCGGGAAAAAACGTCGGAAGAGGCATTCCCGATGCCGCGTCATGCGTCGGCATAAGGTCTTTTGAGAGAGAAACTCCCGATGCCACTTTGGTCGATGCATGTCACAGCGTCGGGAGAGGCATTTCCGACGCCTTGTTGGTACGGCGTCGGGAATGCCTCTTCCGATTCATGTCTCCCGACGTTGTTCCCGAGGTTGTGAAAAACGTTGGCATATCCTTTCCCAACGTTTTTGTGCGTCGGGAGTATCCTTGTCTCTTGCAGTGTTTGGAATTGTTGCCCATGTTTTGCAAATATATTAGTAAAGGATACCTACATTTAAACCATTTTCATGCAAAACACGAATGGAGGGAAGATCTTGGAGGGGTGGGGTAA MSGKNVGRGIPDAASCVGIRSFERETPDATLVDACHSVGRGISDALLVRRRECLFRFMSPDVVPEVVKNVGISFPNVFVRREYPCLLQCLELLPMFCKYISKGYLHLNHFHAKHEWREDLGGVG Homology
BLAST of IVF0003780 vs. ExPASy TrEMBL
Match: A0A5D3CX81 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94G00790 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 1.0e-10 Identity = 36/58 (62.07%), Postives = 41/58 (70.69%), Query Frame = 0
BLAST of IVF0003780 vs. ExPASy TrEMBL
Match: A0A5D3CRC0 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold186G00660 PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 2.2e-08 Identity = 43/83 (51.81%), Postives = 50/83 (60.24%), Query Frame = 0
BLAST of IVF0003780 vs. ExPASy TrEMBL
Match: A0A5D3BBD4 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold174G00140 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 4.8e-08 Identity = 35/75 (46.67%), Postives = 44/75 (58.67%), Query Frame = 0
BLAST of IVF0003780 vs. ExPASy TrEMBL
Match: A0A5A7VPX1 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold485G00930 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 4.8e-08 Identity = 35/75 (46.67%), Postives = 44/75 (58.67%), Query Frame = 0
BLAST of IVF0003780 vs. ExPASy TrEMBL
Match: A0A5D3E1C4 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1212G00160 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 4.1e-07 Identity = 29/45 (64.44%), Postives = 35/45 (77.78%), Query Frame = 0
BLAST of IVF0003780 vs. NCBI nr
Match: KAA0049602.1 (reverse transcriptase [Cucumis melo var. makuwa] >TYK15960.1 reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 74.7 bits (182), Expect = 7.18e-13 Identity = 36/58 (62.07%), Postives = 41/58 (70.69%), Query Frame = 0
BLAST of IVF0003780 vs. NCBI nr
Match: TYK14413.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 69.3 bits (168), Expect = 1.33e-11 Identity = 43/83 (51.81%), Postives = 50/83 (60.24%), Query Frame = 0
BLAST of IVF0003780 vs. NCBI nr
Match: KAA0067621.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 67.4 bits (163), Expect = 4.20e-10 Identity = 35/75 (46.67%), Postives = 44/75 (58.67%), Query Frame = 0
BLAST of IVF0003780 vs. NCBI nr
Match: TYJ97142.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 67.4 bits (163), Expect = 4.22e-10 Identity = 35/75 (46.67%), Postives = 44/75 (58.67%), Query Frame = 0
BLAST of IVF0003780 vs. NCBI nr
Match: TYK29255.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 64.7 bits (156), Expect = 3.20e-09 Identity = 29/45 (64.44%), Postives = 35/45 (77.78%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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