IVF0003360 (gene) Melon (IVF77) v1

Overview


Name	IVF0003360
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Protein TAPETUM DETERMINANT 1
Location	chr12: 22802677 .. 22805421 (-)
RNA-Seq Expression	IVF0003360
Synteny	IVF0003360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCTTCTTCTTCTTCTTCTTCTTCTCTTCCCTCCTCCGACAATTCGCCGCCCATCGCCGCCGACTCTCGTTTCACTCTCCTCTAGGGTTTTCACTTTTCTTCATTCGTCTCGTCTCCTTCTGCAGCATTGTGTATGTCTATGCTTTTTTTTTTTCTCCCTTTTATTTAATGCGTTCAAACAAAACGTAGAGTGTGATGATTTTCGCTTTTTGAGGATCGTGGTGTTTTGTTATTTACAGGTATCCACGATTTCCTTCTGCCATTTTTGTCTCTCTTCTACTGAACTTTCTGCTCCATTTTCATCTTGTACGTACTCTCCATCTTTTCCTTTTTTCTGTTTCACTTTTTCTGTCTTTCTCTCCCTCGCATGCTTTTCAATTTCTCCGTATTCTTCCTTTTTCTCTCTTTCCTTCTTCTTCCGTAACTGTCACTTCTCTTGCACCATAACACGCTTCGTTTTTTCTTCCATTTCTTTTGTATTCTTACACGTTTTCTGCGTTGTCGTTTCATTAATTTCGCCTACACCTACTGGTGGGGTAACTACTACTAAGTATAGCTGTGATTCTGACCATTTTTCAGCCTCTGGGACTCTTTATGGCGATGCTTCTTCGTTTAAAGTCAATCAACTTCTCTCTGTATATCTCTTTGTTTTCGACGGCTCTTCTTTTCTTTTTTGACTCCTTGTATTTTCAAATGCACATTTTCCTCTCTGATGATGTGATGTTTTTCATTCTTTTCCCAACGCAGGTTCTTTAGTTTCTGAAGTTTCTTCTCTCTTATCAAGGATCGGTTTCACCTTGATTCCGATTTCTTTCCTTTCACTGTACAACAGTTCTTTCCGGAGTTTACAGGATTCTCTGTTATAAATGATGAAAGAACTGTCTACCACCACCACTACTACTACTACTCGGCGTGTATCGGTGATTTTCGCTTTGGTTATCTTCGTCTTCTTTTTCTTATCTGCTGTTCTTACAGGTCTGTATCATCTCTCGCACTCCGTTCTCCGTTTGTTTTCAATTTGTTTTTTACTGTGTGTTTTGATTTGTTATACTTTTACGTCGCTTCTCTCTCTCTCTCTCTCTGTGTGTTTACCTTTTGTTTTGTCTTCTTCTTCCTGTATATTTTATTTGTTCCTCAATCATTGTTCTCTCCTTTGTCTTTTTCTACTTCGTATAGAAACAAAGATATTATTCTTCTTTTACTACTTTTGTTCACATCATTCTCTTCCTTACATGATTACAGATTCCAATATTATGGATTCCAGTCCACCAAGTTTTCTTCCGTTGAATTTGAATACCACAACAGTTGCTCCTCATCGGAAGCTTCTTCTCACTAGTAAGTTTACGAAATCTGATTTAATCGTGTATTCATAAATGTTATACCAGCAGATTCGTTTTTCGTAGAATCGTTATTCTTTTCTGAGTTTGTTGTTGTTTTTGTTTTAAATGTCTGTTTGATTTTGAATTATGATCTTAGGGATGAGGGGAGGGATTGAAAGATTGGGTACTCAATTGCATATATGGTTGATTTGTTGTCAGAATTGCACGCCCACCTATTCTTAGTAATGAAGCTAAGGCGCACCTTTTTCTATGTAGCTTTCAACTCCTTCTTTCTGTTCTTTAACCTATATGGCCTTTCTGTAGCTGTTTTGGAGAAATCTTCTTTATTTGATCCCATATACCCACCGGCCTTTCTTCCTTTTTCTGTCCACAATTCATTGATTACATAAAAGCAACCTTTGGCCCGAAAGCGTGGAGCATTATAATGCCTTTTTCAGTTTTAGCTTTTGAGCTTCTAATTGAATTCATTTCTTTGACAAAAAAGCTGTACCGTTGAATGTGTGTGTATATTAAATCATATCATACGATTAGCTAATGCGTGGACTCCCTTTAGTGGGATTGTTGAGGGTACAGTTTTATTAGTTTTAAACTTTCATATGATTGTAATGGACGTAATTTTGAATTTTAAATTTTGTCATGTCTAACCAAATGGATTGAATTTAGATAATGGTGCCATGGGATTTTTCTTTTTCATACTCTCTTTACTCTTTACCTTCGCCTTTGAATTTGCTTTATCTTTTATAATTGATTATTAATGCTTTGAACACAACTTTTATGACTTCCAGAAAGTGTAGTTTGTGTGTCTGTAGTTGTTTTTCCATTGGGTGGGTCGATATTTATTTATAAGAGTAATGTTTGCACGTGGGTGGTGCCTTCAACAATGCCTCAATATACGATGCTAACAATGACGTCGACCTGTTTGTTTCTTTATTTGAATATGTGCTTTTAGGGGAAGCAACAATTGAGGAACCAACCAGAATTTGGGGTGAAAAGTGTACAAAATCAGACATTGTGATTAACCAAGGCCCCACAGCTCCACTTCCAACTGGTATCCCCACCTACACTGTGGAGGTGGTGAACGCTTGTGTCACTGGATGTGAGATTTATGGTATTCATTTCAAATGCGGTTGGTTCAGCTCGGCTCACCTCATCAATCCCAGAGTCTTTAAGCGTCTACGTTATGACGACTGTCTCGTGAACGACGGCAAACCTCTTGTCTACGGTGGTACACTCTCATTTCAATATGCAAACACGTACCCTTACCCACTTTCAGTCTCCTCAGTTCTATGCATCTGAAATGACACGCACCAAACCAATTAGGAGACGCTCATATGAAGCACTTGAAGCAGCAGCAGGTACTTTAGTCGATTACTGATTGACGATGGGCCCCCCACCCCTCCCCCCC

mRNA sequence

CCCTTCTTCTTCTTCTTCTTCTTCTCTTCCCTCCTCCGACAATTCGCCGCCCATCGCCGCCGACTCTCGTTTCACTCTCCTCTAGGGTTTTCACTTTTCTTCATTCGTCTCGTCTCCTTCTGCAGCATTGTGTATCCACGATTTCCTTCTGCCATTTTTGTCTCTCTTCTACTGAACTTTCTGCTCCATTTTCATCTTCCTCTGGGACTCTTTATGGCGATGCTTCTTCGTTTAAAGTCAATCAACTTCTCTCTGTTCTTTAGTTTCTGAAGTTTCTTCTCTCTTATCAAGGATCGGTTTCACCTTGATTCCGATTTCTTTCCTTTCACTGTACAACAGTTCTTTCCGGAGTTTACAGGATTCTCTGTTATAAATGATGAAAGAACTGTCTACCACCACCACTACTACTACTACTCGGCGTGTATCGGTGATTTTCGCTTTGGTTATCTTCGTCTTCTTTTTCTTATCTGCTGTTCTTACAGATTCCAATATTATGGATTCCAGTCCACCAAGTTTTCTTCCGTTGAATTTGAATACCACAACAGTTGCTCCTCATCGGAAGCTTCTTCTCACTAGGGAAGCAACAATTGAGGAACCAACCAGAATTTGGGGTGAAAAGTGTACAAAATCAGACATTGTGATTAACCAAGGCCCCACAGCTCCACTTCCAACTGGTATCCCCACCTACACTGTGGAGGTGGTGAACGCTTGTGTCACTGGATGTGAGATTTATGGTATTCATTTCAAATGCGGTTGGTTCAGCTCGGCTCACCTCATCAATCCCAGAGTCTTTAAGCGTCTACGTTATGACGACTGTCTCGTGAACGACGGCAAACCTCTTGTCTACGGTGGTACACTCTCATTTCAATATGCAAACACGTACCCTTACCCACTTTCAGTCTCCTCAGTTCTATGCATCTGAAATGACACGCACCAAACCAATTAGGAGACGCTCATATGAAGCACTTGAAGCAGCAGCAGGTACTTTAGTCGATTACTGATTGACGATGGGCCCCCCACCCCTCCCCCCC

Coding sequence (CDS)

ATGATGAAAGAACTGTCTACCACCACCACTACTACTACTACTCGGCGTGTATCGGTGATTTTCGCTTTGGTTATCTTCGTCTTCTTTTTCTTATCTGCTGTTCTTACAGATTCCAATATTATGGATTCCAGTCCACCAAGTTTTCTTCCGTTGAATTTGAATACCACAACAGTTGCTCCTCATCGGAAGCTTCTTCTCACTAGGGAAGCAACAATTGAGGAACCAACCAGAATTTGGGGTGAAAAGTGTACAAAATCAGACATTGTGATTAACCAAGGCCCCACAGCTCCACTTCCAACTGGTATCCCCACCTACACTGTGGAGGTGGTGAACGCTTGTGTCACTGGATGTGAGATTTATGGTATTCATTTCAAATGCGGTTGGTTCAGCTCGGCTCACCTCATCAATCCCAGAGTCTTTAAGCGTCTACGTTATGACGACTGTCTCGTGAACGACGGCAAACCTCTTGTCTACGGTGGTACACTCTCATTTCAATATGCAAACACGTACCCTTACCCACTTTCAGTCTCCTCAGTTCTATGCATCTGA

Protein sequence

MMKELSTTTTTTTTRRVSVIFALVIFVFFFLSAVLTDSNIMDSSPPSFLPLNLNTTTVAPHRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVLCI

Homology

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BLAST of IVF0003360 vs. ExPASy Swiss-Prot
Match: Q6TLJ2 (Protein TAPETUM DETERMINANT 1 OS=Arabidopsis thaliana OX=3702 GN=TPD1 PE=1 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 8.8e-40
Identity = 82/135 (60.74%), Postives = 96/135 (71.11%), Query Frame = 0


Query: 55  TTTVAP---HRKLLLTREATIE-----EPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYT 114
           TTT +P   HRK+LL    T +     EP RI GEKC  +DIV+NQ  T P+P GIP Y 
Sbjct: 42  TTTSSPSISHRKMLLLSPGTGKTERSVEPERI-GEKCKSTDIVVNQAVTEPMPNGIPGYM 101

Query: 115 VEVVNACVTGCEIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQY 174
           VE+ N C++GC I  IH  CGWFSSA LINPRVFKR+ YDDCLVN+GKPL +G TLSF Y
Sbjct: 102 VEITNQCMSGCIISRIHINCGWFSSAKLINPRVFKRIHYDDCLVNNGKPLPFGSTLSFHY 161

Query: 175 ANTYPYPLSVSSVLC 182
           ANT+PY LSV+ V C
Sbjct: 162 ANTFPYHLSVAFVTC 175

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BLAST of IVF0003360 vs. ExPASy Swiss-Prot
Match: Q1G3T1 (TPD1 protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=TDL1 PE=2 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.7e-38
Identity = 78/135 (57.78%), Postives = 101/135 (74.81%), Query Frame = 0


Query: 47  SFLPLNLNTTTVAPHRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYT 106
           SF+ +N N T ++  RKLLL+ +  I + T   G+ C+K DIV+ QG T PLP+G+P+YT
Sbjct: 48  SFVSINENRTALS--RKLLLSPD--IGDGTNRIGQDCSKDDIVLFQGSTNPLPSGVPSYT 107

Query: 107 VEVVNACVTGCEIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQY 166
           VE+ N+CV+ C I  IH  CGWFSS  L+NPRVF+RL YDDCLVNDG+PL  G +LSFQY
Sbjct: 108 VEIFNSCVSDCNIAEIHVSCGWFSSVRLVNPRVFRRLDYDDCLVNDGQPLGPGQSLSFQY 167

Query: 167 ANTYPYPLSVSSVLC 182
           AN++ YPLSV+SV C
Sbjct: 168 ANSFSYPLSVASVSC 178

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BLAST of IVF0003360 vs. ExPASy Swiss-Prot
Match: Q2QR54 (TPD1 protein homolog 1A OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1A PE=1 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.8e-29
Identity = 57/102 (55.88%), Postives = 74/102 (72.55%), Query Frame = 0


Query: 87  DIVINQGPTAPLPTGIPTYTVEVVNACVTG------CEIYGIHFKCGWFSSAHLINPRVF 146
           DI I QG   PLP+G+P YTV+V+N C  G      C I GIH +CGWFSS  L++PRVF
Sbjct: 119 DIAIYQGRATPLPSGVPAYTVDVMNRCAGGGGGDEECAIAGIHVRCGWFSSVSLVDPRVF 178

Query: 147 KRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVLCI 183
           +RL +DDCL+NDG+PL+ G T+SF+Y N++PY LSVS   C+
Sbjct: 179 RRLGHDDCLLNDGRPLLAGETVSFEYTNSFPYKLSVSVATCV 220

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BLAST of IVF0003360 vs. ExPASy Swiss-Prot
Match: Q8S6P9 (TPD1 protein homolog 1B OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1B PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 3.7e-22
Identity = 63/175 (36.00%), Postives = 94/175 (53.71%), Query Frame = 0


Query: 12  TTTRRVSVIFALVIFVFFFLSAVLTDSNIMDSSPPSFLPLNLNTTTVAPHRKLLLTREAT 71
           TT R  S +   +I +    S  L  S    SS      LN+N        KLL   E  
Sbjct: 5   TTMRLASSV--TIILLLLVASQALVVSGESSSSAMQSKTLNMN--------KLLNISEDH 64

Query: 72  IEEPTRIWGEK-----CTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIYGIHFKC 131
                R W ++     C++ ++V+ Q     LP+GIPTY+VE++N C T C +Y +H  C
Sbjct: 65  SPNGGRHWMQRMQPDSCSEQNVVVYQNNAEHLPSGIPTYSVEIINVC-TACTVYDVHISC 124

Query: 132 GWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVLC 182
           G F+SA L++P  F+R+ ++DCLV  G  L     +SFQY+N++ YPL+V++V C
Sbjct: 125 GEFASAELVDPSQFQRIGFNDCLVKGGGRLGPSEAVSFQYSNSFAYPLAVANVAC 168

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BLAST of IVF0003360 vs. ExPASy Swiss-Prot
Match: A8MS78 (Uncharacterized protein At1g05835 OS=Arabidopsis thaliana OX=3702 GN=At1g05835 PE=2 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 5.4e-05
Identity = 28/72 (38.89%), Postives = 40/72 (55.56%), Query Frame = 0


Query: 105 YTVEVVNACVTGCEIYGIHFKCGWFSSAHLINPRVFKRLRYD--DCLVNDGKPLVYGGTL 164
           + VEV+N C   C I  +  KC  F  + L++P   + L     +C+VNDG PL    TL
Sbjct: 48  FRVEVMNKCPM-CPIINLRLKCQGFPQS-LVDPTFLRVLSSSAGNCVVNDGLPLSPMQTL 107

Query: 165 SFQYANTYPYPL 175
           SF Y+NT+ + L
Sbjct: 108 SFNYSNTHQFAL 117

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BLAST of IVF0003360 vs. ExPASy TrEMBL
Match: A0A1S3B0P8 (protein TAPETUM DETERMINANT 1 OS=Cucumis melo OX=3656 GN=LOC103484600 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 1.9e-98
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MMKELSTTTTTTTTRRVSVIFALVIFVFFFLSAVLTDSNIMDSSPPSFLPLNLNTTTVAP 60
           MMKELSTTTTTTTTRRVSVIFALVIFVFFFLSAVLTDSNIMDSSPPSFLPLNLNTTTVAP
Sbjct: 1   MMKELSTTTTTTTTRRVSVIFALVIFVFFFLSAVLTDSNIMDSSPPSFLPLNLNTTTVAP 60

Query: 61  HRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIY 120
           HRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIY
Sbjct: 61  HRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIY 120

Query: 121 GIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVL 180
           GIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVL
Sbjct: 121 GIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVL 180

Query: 181 CI 183
           CI
Sbjct: 181 CI 182

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BLAST of IVF0003360 vs. ExPASy TrEMBL
Match: A0A5A7UPF3 (Protein TAPETUM DETERMINANT 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G001940 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 1.9e-98
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MMKELSTTTTTTTTRRVSVIFALVIFVFFFLSAVLTDSNIMDSSPPSFLPLNLNTTTVAP 60
           MMKELSTTTTTTTTRRVSVIFALVIFVFFFLSAVLTDSNIMDSSPPSFLPLNLNTTTVAP
Sbjct: 1   MMKELSTTTTTTTTRRVSVIFALVIFVFFFLSAVLTDSNIMDSSPPSFLPLNLNTTTVAP 60

Query: 61  HRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIY 120
           HRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIY
Sbjct: 61  HRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIY 120

Query: 121 GIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVL 180
           GIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVL
Sbjct: 121 GIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVL 180

Query: 181 CI 183
           CI
Sbjct: 181 CI 182

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BLAST of IVF0003360 vs. ExPASy TrEMBL
Match: A0A5D3BLS2 (Protein TAPETUM DETERMINANT 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004880 PE=4 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 4.0e-96
Identity = 182/191 (95.29%), Postives = 182/191 (95.29%), Query Frame = 0


Query: 1   MMKELSTTTTTTTTRRVSVIFALVIFVFFFLSAVLTDSNIMDSSPPSFLPLNLNTTTVAP 60
           MMKELSTTTTTTTTRRVSVIFALVIFVFFFLSAVLTDSNIMDSSPPSFLPLNLNTTTVAP
Sbjct: 1   MMKELSTTTTTTTTRRVSVIFALVIFVFFFLSAVLTDSNIMDSSPPSFLPLNLNTTTVAP 60

Query: 61  HRKLLLTR---------EATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVN 120
           HRKLLLTR         EATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVN
Sbjct: 61  HRKLLLTRMRGGIERLGEATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVN 120

Query: 121 ACVTGCEIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYP 180
           ACVTGCEIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYP
Sbjct: 121 ACVTGCEIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYP 180

Query: 181 YPLSVSSVLCI 183
           YPLSVSSVLCI
Sbjct: 181 YPLSVSSVLCI 191

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BLAST of IVF0003360 vs. ExPASy TrEMBL
Match: A0A0A0LUG9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G051700 PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 1.2e-95
Identity = 174/182 (95.60%), Postives = 180/182 (98.90%), Query Frame = 0


Query: 1   MMKELSTTTTTTTTRRVSVIFALVIFVFFFLSAVLTDSNIMDSSPPSFLPLNLNTTTVAP 60
           MMKELSTTTTTTTTRRVSVIFALV+F+FFF+SA+LTD NIMDS PPSFLPL+LNTTTVAP
Sbjct: 1   MMKELSTTTTTTTTRRVSVIFALVLFIFFFVSAILTDPNIMDSGPPSFLPLDLNTTTVAP 60

Query: 61  HRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIY 120
           HRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIY
Sbjct: 61  HRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIY 120

Query: 121 GIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVL 180
           GIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVL
Sbjct: 121 GIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVL 180

Query: 181 CI 183
           C+
Sbjct: 181 CM 182

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BLAST of IVF0003360 vs. ExPASy TrEMBL
Match: A0A6J1C840 (protein TAPETUM DETERMINANT 1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111009090 PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 2.7e-84
Identity = 160/185 (86.49%), Postives = 171/185 (92.43%), Query Frame = 0


Query: 1   MMKELSTTTTTTTTRRVSVIFALVIFVFFFLSAVLTDSNI----MDSSPPSFLPLNLNTT 60
           MMK+   +TTTT TRRVSVIFA V F+FF LSA+LTD +I    M+SSPPS+LPL LNTT
Sbjct: 1   MMKD-DLSTTTTATRRVSVIFASVFFIFFSLSALLTDLDIIGSFMNSSPPSYLPLGLNTT 60

Query: 61  TVAPHRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTG 120
            VAPHRKLLLT+EATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTG
Sbjct: 61  IVAPHRKLLLTKEATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTG 120

Query: 121 CEIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSV 180
           C+IYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANT+PYPLSV
Sbjct: 121 CDIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSV 180

Query: 181 SSVLC 182
           SSV+C
Sbjct: 181 SSVVC 184

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BLAST of IVF0003360 vs. NCBI nr
Match: XP_008439976.1 (PREDICTED: protein TAPETUM DETERMINANT 1 [Cucumis melo] >XP_008439984.1 PREDICTED: protein TAPETUM DETERMINANT 1 [Cucumis melo] >XP_008439993.1 PREDICTED: protein TAPETUM DETERMINANT 1 [Cucumis melo] >XP_008440012.1 PREDICTED: protein TAPETUM DETERMINANT 1 [Cucumis melo] >KAA0055349.1 protein TAPETUM DETERMINANT 1 [Cucumis melo var. makuwa])

HSP 1 Score: 367 bits (942), Expect = 4.25e-128
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MMKELSTTTTTTTTRRVSVIFALVIFVFFFLSAVLTDSNIMDSSPPSFLPLNLNTTTVAP 60
           MMKELSTTTTTTTTRRVSVIFALVIFVFFFLSAVLTDSNIMDSSPPSFLPLNLNTTTVAP
Sbjct: 1   MMKELSTTTTTTTTRRVSVIFALVIFVFFFLSAVLTDSNIMDSSPPSFLPLNLNTTTVAP 60

Query: 61  HRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIY 120
           HRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIY
Sbjct: 61  HRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIY 120

Query: 121 GIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVL 180
           GIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVL
Sbjct: 121 GIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVL 180

Query: 181 CI 182
           CI
Sbjct: 181 CI 182

[Close]

BLAST of IVF0003360 vs. NCBI nr
Match: TYJ99275.1 (protein TAPETUM DETERMINANT 1 [Cucumis melo var. makuwa])

HSP 1 Score: 359 bits (922), Expect = 6.56e-125
Identity = 182/191 (95.29%), Postives = 182/191 (95.29%), Query Frame = 0


Query: 1   MMKELSTTTTTTTTRRVSVIFALVIFVFFFLSAVLTDSNIMDSSPPSFLPLNLNTTTVAP 60
           MMKELSTTTTTTTTRRVSVIFALVIFVFFFLSAVLTDSNIMDSSPPSFLPLNLNTTTVAP
Sbjct: 1   MMKELSTTTTTTTTRRVSVIFALVIFVFFFLSAVLTDSNIMDSSPPSFLPLNLNTTTVAP 60

Query: 61  HRKLLLTR---------EATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVN 120
           HRKLLLTR         EATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVN
Sbjct: 61  HRKLLLTRMRGGIERLGEATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVN 120

Query: 121 ACVTGCEIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYP 180
           ACVTGCEIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYP
Sbjct: 121 ACVTGCEIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYP 180

Query: 181 YPLSVSSVLCI 182
           YPLSVSSVLCI
Sbjct: 181 YPLSVSSVLCI 191

[Close]

BLAST of IVF0003360 vs. NCBI nr
Match: XP_004153503.1 (protein TAPETUM DETERMINANT 1 [Cucumis sativus] >XP_011652240.1 protein TAPETUM DETERMINANT 1 [Cucumis sativus] >XP_011652243.1 protein TAPETUM DETERMINANT 1 [Cucumis sativus] >XP_031736243.1 protein TAPETUM DETERMINANT 1 [Cucumis sativus] >KGN64432.1 hypothetical protein Csa_014163 [Cucumis sativus])

HSP 1 Score: 358 bits (918), Expect = 1.94e-124
Identity = 174/182 (95.60%), Postives = 180/182 (98.90%), Query Frame = 0


Query: 1   MMKELSTTTTTTTTRRVSVIFALVIFVFFFLSAVLTDSNIMDSSPPSFLPLNLNTTTVAP 60
           MMKELSTTTTTTTTRRVSVIFALV+F+FFF+SA+LTD NIMDS PPSFLPL+LNTTTVAP
Sbjct: 1   MMKELSTTTTTTTTRRVSVIFALVLFIFFFVSAILTDPNIMDSGPPSFLPLDLNTTTVAP 60

Query: 61  HRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIY 120
           HRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIY
Sbjct: 61  HRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIY 120

Query: 121 GIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVL 180
           GIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVL
Sbjct: 121 GIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVL 180

Query: 181 CI 182
           C+
Sbjct: 181 CM 182

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BLAST of IVF0003360 vs. NCBI nr
Match: XP_022137731.1 (protein TAPETUM DETERMINANT 1-like isoform X1 [Momordica charantia] >XP_022137732.1 protein TAPETUM DETERMINANT 1-like isoform X1 [Momordica charantia] >XP_022137733.1 protein TAPETUM DETERMINANT 1-like isoform X1 [Momordica charantia] >XP_022137734.1 protein TAPETUM DETERMINANT 1-like isoform X1 [Momordica charantia] >XP_022137735.1 protein TAPETUM DETERMINANT 1-like isoform X1 [Momordica charantia])

HSP 1 Score: 320 bits (820), Expect = 1.88e-109
Identity = 160/185 (86.49%), Postives = 171/185 (92.43%), Query Frame = 0


Query: 1   MMKELSTTTTTTTTRRVSVIFALVIFVFFFLSAVLTDSNI----MDSSPPSFLPLNLNTT 60
           MMK+   +TTTT TRRVSVIFA V F+FF LSA+LTD +I    M+SSPPS+LPL LNTT
Sbjct: 1   MMKD-DLSTTTTATRRVSVIFASVFFIFFSLSALLTDLDIIGSFMNSSPPSYLPLGLNTT 60

Query: 61  TVAPHRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTG 120
            VAPHRKLLLT+EATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTG
Sbjct: 61  IVAPHRKLLLTKEATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTG 120

Query: 121 CEIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSV 180
           C+IYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANT+PYPLSV
Sbjct: 121 CDIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSV 180

[Close]

BLAST of IVF0003360 vs. NCBI nr
Match: XP_022923940.1 (protein TAPETUM DETERMINANT 1-like [Cucurbita moschata] >XP_022923941.1 protein TAPETUM DETERMINANT 1-like [Cucurbita moschata] >XP_022923942.1 protein TAPETUM DETERMINANT 1-like [Cucurbita moschata] >XP_022923943.1 protein TAPETUM DETERMINANT 1-like [Cucurbita moschata] >KAG6584166.1 Protein TAPETUM DETERMINANT 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 314 bits (804), Expect = 4.66e-107
Identity = 158/185 (85.41%), Postives = 166/185 (89.73%), Query Frame = 0


Query: 1   MMKELSTTTTTTTTRRVSVIFALVIFVFFFLSAVLTDSNI----MDSSPPSFLPLNLNTT 60
           MMK+LSTT      RRVSVIFA V F+FF +SA+LTD +I    MDSSPPSFL L LN+T
Sbjct: 1   MMKDLSTT------RRVSVIFASVFFIFFLVSAILTDLDIFHSFMDSSPPSFLRLGLNST 60

Query: 61  TVAPHRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTG 120
             APHRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTG
Sbjct: 61  IGAPHRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTG 120

Query: 121 CEIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSV 180
           C+IYGIHFKCGWFSSAHLINPRVFKRL YDDCLVNDGKPLVYGGTLSFQYANTYPYPLSV
Sbjct: 121 CDIYGIHFKCGWFSSAHLINPRVFKRLHYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSV 179

[Close]

BLAST of IVF0003360 vs. TAIR 10
Match: AT4G24972.1 (tapetum determinant 1 )

HSP 1 Score: 164.9 bits (416), Expect = 6.2e-41
Identity = 82/135 (60.74%), Postives = 96/135 (71.11%), Query Frame = 0


Query: 55  TTTVAP---HRKLLLTREATIE-----EPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYT 114
           TTT +P   HRK+LL    T +     EP RI GEKC  +DIV+NQ  T P+P GIP Y 
Sbjct: 42  TTTSSPSISHRKMLLLSPGTGKTERSVEPERI-GEKCKSTDIVVNQAVTEPMPNGIPGYM 101

Query: 115 VEVVNACVTGCEIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQY 174
           VE+ N C++GC I  IH  CGWFSSA LINPRVFKR+ YDDCLVN+GKPL +G TLSF Y
Sbjct: 102 VEITNQCMSGCIISRIHINCGWFSSAKLINPRVFKRIHYDDCLVNNGKPLPFGSTLSFHY 161

Query: 175 ANTYPYPLSVSSVLC 182
           ANT+PY LSV+ V C
Sbjct: 162 ANTFPYHLSVAFVTC 175

[Close]

BLAST of IVF0003360 vs. TAIR 10
Match: AT1G32583.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: tapetum determinant 1 (TAIR:AT4G24972.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 160.6 bits (405), Expect = 1.2e-39
Identity = 78/135 (57.78%), Postives = 101/135 (74.81%), Query Frame = 0


Query: 47  SFLPLNLNTTTVAPHRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYT 106
           SF+ +N N T ++  RKLLL+ +  I + T   G+ C+K DIV+ QG T PLP+G+P+YT
Sbjct: 48  SFVSINENRTALS--RKLLLSPD--IGDGTNRIGQDCSKDDIVLFQGSTNPLPSGVPSYT 107

Query: 107 VEVVNACVTGCEIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQY 166
           VE+ N+CV+ C I  IH  CGWFSS  L+NPRVF+RL YDDCLVNDG+PL  G +LSFQY
Sbjct: 108 VEIFNSCVSDCNIAEIHVSCGWFSSVRLVNPRVFRRLDYDDCLVNDGQPLGPGQSLSFQY 167

Query: 167 ANTYPYPLSVSSVLC 182
           AN++ YPLSV+SV C
Sbjct: 168 ANSFSYPLSVASVSC 178

[Close]

BLAST of IVF0003360 vs. TAIR 10
Match: AT1G05835.1 (PHD finger protein )

HSP 1 Score: 49.3 bits (116), Expect = 3.8e-06
Identity = 28/72 (38.89%), Postives = 40/72 (55.56%), Query Frame = 0


Query: 105 YTVEVVNACVTGCEIYGIHFKCGWFSSAHLINPRVFKRLRYD--DCLVNDGKPLVYGGTL 164
           + VEV+N C   C I  +  KC  F  + L++P   + L     +C+VNDG PL    TL
Sbjct: 48  FRVEVMNKCPM-CPIINLRLKCQGFPQS-LVDPTFLRVLSSSAGNCVVNDGLPLSPMQTL 107

Query: 165 SFQYANTYPYPL 175
           SF Y+NT+ + L
Sbjct: 108 SFNYSNTHQFAL 117

The following BLAST results are available for this feature:

BLAST of IVF0003360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6TLJ2	8.8e-40	60.74	Protein TAPETUM DETERMINANT 1 OS=Arabidopsis thaliana OX=3702 GN=TPD1 PE=1 SV=1	[more]
Q1G3T1	1.7e-38	57.78	TPD1 protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=TDL1 PE=2 SV=1	[more]
Q2QR54	1.8e-29	55.88	TPD1 protein homolog 1A OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1A PE=1 S...	[more]
Q8S6P9	3.7e-22	36.00	TPD1 protein homolog 1B OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1B PE=2 S...	[more]
A8MS78	5.4e-05	38.89	Uncharacterized protein At1g05835 OS=Arabidopsis thaliana OX=3702 GN=At1g05835 P...	[more]

BLAST of IVF0003360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B0P8	1.9e-98	100.00	protein TAPETUM DETERMINANT 1 OS=Cucumis melo OX=3656 GN=LOC103484600 PE=4 SV=1	[more]
A0A5A7UPF3	1.9e-98	100.00	Protein TAPETUM DETERMINANT 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A5D3BLS2	4.0e-96	95.29	Protein TAPETUM DETERMINANT 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A0A0LUG9	1.2e-95	95.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G051700 PE=4 SV=1	[more]
A0A6J1C840	2.7e-84	86.49	protein TAPETUM DETERMINANT 1-like isoform X1 OS=Momordica charantia OX=3673 GN=...	[more]

BLAST of IVF0003360 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008439976.1	4.25e-128	100.00	PREDICTED: protein TAPETUM DETERMINANT 1 [Cucumis melo] >XP_008439984.1 PREDICTE...	[more]
TYJ99275.1	6.56e-125	95.29	protein TAPETUM DETERMINANT 1 [Cucumis melo var. makuwa]	[more]
XP_004153503.1	1.94e-124	95.60	protein TAPETUM DETERMINANT 1 [Cucumis sativus] >XP_011652240.1 protein TAPETUM ...	[more]
XP_022137731.1	1.88e-109	86.49	protein TAPETUM DETERMINANT 1-like isoform X1 [Momordica charantia] >XP_02213773...	[more]
XP_022923940.1	4.66e-107	85.41	protein TAPETUM DETERMINANT 1-like [Cucurbita moschata] >XP_022923941.1 protein ...	[more]

BLAST of IVF0003360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G24972.1	6.2e-41	60.74	tapetum determinant 1	[more]
AT1G32583.1	1.2e-39	57.78	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT1G05835.1	3.8e-06	38.89	PHD finger protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR040361	Tapetum determinant 1	PANTHER	PTHR33184	PROTEIN TAPETUM DETERMINANT 1-LIKE-RELATED	coord: 15..181
None	No IPR available	PANTHER	PTHR33184:SF67	PROTEIN TAPETUM DETERMINANT 1	coord: 15..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0003360.3	IVF0003360.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001709	cell fate determination
cellular_component	GO:0016021	integral component of membrane