IVF0002686 (gene) Melon (IVF77) v1

Overview


Name	IVF0002686
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Reverse transcriptase
Location	chr08: 12953429 .. 12954934 (+)
RNA-Seq Expression	IVF0002686
Synteny	IVF0002686

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGAAGCCGCTGTGTCAGTAGGCAAGTTGGAAAGTTTAGTTGCACATTTCCAAGTGCGACCTTTTTTGATAGACCGTATTATTAAAGCCCAGCTAGATGATGCAAGACTGAGGAAGTTAGCAGAAGAGGTAAGACAAAACCAAAGATTGAATTATAGCTTGAGGGGTGATGGTGCCTTGATGAAATGTGATAGGTTGTGTGTACCCAGTGACCAAACGATAAAAGATCAAATTTTAGAGGAAGCACATAGTTCTGCATATGCAATGCATCCTGGTAGTACGAAAGTGTATAGAACTTTGAAGAAACACTATTGGTGGCCAGGTATAAAGCGTGAGATTGCAGATTATGTGGCTAAGTGTTTGATATGTCAGCAAGTTAAACCTGAACGTCAGAGACCAGCGGGACTCCTAAATCCTCTTCCAGTACCGGAATGGAAATGGGAGCATGTTACCATGGACTTTCATTTGGGACTACCCCGCACAACGAATGGGAATGATGGCATTTGGGTGATAGTTGACAGACTTACGAAGACAGCAAGATTTCTACCAGTCAAGGTCACTTTCACTTTGGATAAGCTGGCCAAATTGTATGTTGATAAAATTGTGAGTGCGTATGGAGCCCCAATATCTATTGTGTCTGATCGAGACTCCAAGTTTACCTCAAAGTTTTGGCCAAGTTTACAACAAGCCTTAGGTACCAAGTTACATTTTAGTACCGCATTTCATCCTCAGATAGATGGCCAGTAAGAACGAACCATTCAAACTTTGGAAGATATGCTTAGAGCTTGTGCTTTGCAGTTTAAGGGTAATTGGGATGCTCATCTATCCTTGATGGAATTTGCATATAATAATAGTTTCCATTCAAGTATTGGAATGGCACGATATGAGGCTTTGTATGGTAGATGTTGTAGAACTCTCGTGTGCTGGAATGAAGTTGGAGAAAGGAAGTTAGTGGGGCTAGAATTAGTACAAATCACTTCAGAGAATGTGAAGATTATTAGGGAAAGATTGAAAACAGCCCAGGATCGTAAAAAAAGTTATGCAGATAAGCGCCGACGAGATTTAGAATTTGAAGTTAGTGACAAAGTCTTTCTAAAGTTATCTCCTTGGAAAGGTGTGCTTCGATTTGGCAAAAAAGGAAAGTTGAGTCCAAGATTTATTGGGCCTTATGAGATACTTGAACGTATTGGGCCTGTAACATACCGTTTGGCGTTACCTATGGAACTTTCCAGGATTCCTGATGTGTTTCATGTGTCAATGCTGCGTAAGTACGTCCCAGATCCAGCTCATATTCTTGAAGCACAACCAGTTCATTTGAAAGAAAACTTGTCTTACGAAGAGGAGCCAATACAAATTCTTGACAAAAAAGAACAAGTGGTAAGGAACAAAATGATCCCATTAGTTAAGGTTCTTTGGAGGAACCATAATACTGAAGAAGCAACGTGGGAAACAGAGCAAGCAATGAAGGCGCAATACCCATATCTTTTCACATCATCACCTTGA

mRNA sequence

ATGGGTGAAGCCGCTGTGTCAGTAGGCAAGTTGGAAAGTTTAGTTGCACATTTCCAAGTGCGACCTTTTTTGATAGACCGTATTATTAAAGCCCAGCTAGATGATGCAAGACTGAGGAAGTTAGCAGAAGAGGTAAGACAAAACCAAAGATTGAATTATAGCTTGAGGGGTGATGGTGCCTTGATGAAATGTGATAGGTTGTGTGTACCCAGTGACCAAACGATAAAAGATCAAATTTTAGAGGAAGCACATAGTTCTGCATATGCAATGCATCCTGGTAGTACGAAAGTGTATAGAACTTTGAAGAAACACTATTGGTGGCCAGGTATAAAGCGTGAGATTGCAGATTATGTGGCTAAGTGTTTGATATGTCAGCAAGTTAAACCTGAACGTCAGAGACCAGCGGGACTCCTAAATCCTCTTCCAGTACCGGAATGGAAATGGGAGCATGTTACCATGGACTTTCATTTGGGACTACCCCGCACAACGAATGGGAATGATGGCATTTGGTTTAAGGGTAATTGGGATGCTCATCTATCCTTGATGGAATTTGCATATAATAATAGTTTCCATTCAAGTATTGGAATGGCACGATATGAGGCTTTGTATGGTAGATGTTGTAGAACTCTCGTGTGCTGGAATGAAGTTGGAGAAAGGAAGTTAGTGGGGCTAGAATTAGTACAAATCACTTCAGAGAATGTGAAGATTATTAGGGAAAGATTGAAAACAGCCCAGGATCGTAAAAAAAGTTATGCAGATAAGCGCCGACGAGATTTAGAATTTGAAGTTAGTGACAAAGTCTTTCTAAAGTTATCTCCTTGGAAAGGTGTGCTTCGATTTGGCAAAAAAGGAAAGTTGAGTCCAAGATTTATTGGGCCTTATGAGATACTTGAACGTATTGGGCCTGTAACATACCGTTTGGCGTTACCTATGGAACTTTCCAGGATTCCTGATGTGTTTCATGTGTCAATGCTGCGTAAGTACGTCCCAGATCCAGCTCATATTCTTGAAGCACAACCAGTTCATTTGAAAGAAAACTTGTCTTACGAAGAGGAGCCAATACAAATTCTTGACAAAAAAGAACAAGTGGTAAGGAACAAAATGATCCCATTAGTTAAGGTTCTTTGGAGGAACCATAATACTGAAGAAGCAACGTGGGAAACAGAGCAAGCAATGAAGGCGCAATACCCATATCTTTTCACATCATCACCTTGA

Coding sequence (CDS)

ATGGGTGAAGCCGCTGTGTCAGTAGGCAAGTTGGAAAGTTTAGTTGCACATTTCCAAGTGCGACCTTTTTTGATAGACCGTATTATTAAAGCCCAGCTAGATGATGCAAGACTGAGGAAGTTAGCAGAAGAGGTAAGACAAAACCAAAGATTGAATTATAGCTTGAGGGGTGATGGTGCCTTGATGAAATGTGATAGGTTGTGTGTACCCAGTGACCAAACGATAAAAGATCAAATTTTAGAGGAAGCACATAGTTCTGCATATGCAATGCATCCTGGTAGTACGAAAGTGTATAGAACTTTGAAGAAACACTATTGGTGGCCAGGTATAAAGCGTGAGATTGCAGATTATGTGGCTAAGTGTTTGATATGTCAGCAAGTTAAACCTGAACGTCAGAGACCAGCGGGACTCCTAAATCCTCTTCCAGTACCGGAATGGAAATGGGAGCATGTTACCATGGACTTTCATTTGGGACTACCCCGCACAACGAATGGGAATGATGGCATTTGGTTTAAGGGTAATTGGGATGCTCATCTATCCTTGATGGAATTTGCATATAATAATAGTTTCCATTCAAGTATTGGAATGGCACGATATGAGGCTTTGTATGGTAGATGTTGTAGAACTCTCGTGTGCTGGAATGAAGTTGGAGAAAGGAAGTTAGTGGGGCTAGAATTAGTACAAATCACTTCAGAGAATGTGAAGATTATTAGGGAAAGATTGAAAACAGCCCAGGATCGTAAAAAAAGTTATGCAGATAAGCGCCGACGAGATTTAGAATTTGAAGTTAGTGACAAAGTCTTTCTAAAGTTATCTCCTTGGAAAGGTGTGCTTCGATTTGGCAAAAAAGGAAAGTTGAGTCCAAGATTTATTGGGCCTTATGAGATACTTGAACGTATTGGGCCTGTAACATACCGTTTGGCGTTACCTATGGAACTTTCCAGGATTCCTGATGTGTTTCATGTGTCAATGCTGCGTAAGTACGTCCCAGATCCAGCTCATATTCTTGAAGCACAACCAGTTCATTTGAAAGAAAACTTGTCTTACGAAGAGGAGCCAATACAAATTCTTGACAAAAAAGAACAAGTGGTAAGGAACAAAATGATCCCATTAGTTAAGGTTCTTTGGAGGAACCATAATACTGAAGAAGCAACGTGGGAAACAGAGCAAGCAATGAAGGCGCAATACCCATATCTTTTCACATCATCACCTTGA

Protein sequence

MGEAAVSVGKLESLVAHFQVRPFLIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKCDRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRTLKKHYWWPGIKREIADYVAKCLICQQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGNDGIWFKGNWDAHLSLMEFAYNNSFHSSIGMARYEALYGRCCRTLVCWNEVGERKLVGLELVQITSENVKIIRERLKTAQDRKKSYADKRRRDLEFEVSDKVFLKLSPWKGVLRFGKKGKLSPRFIGPYEILERIGPVTYRLALPMELSRIPDVFHVSMLRKYVPDPAHILEAQPVHLKENLSYEEEPIQILDKKEQVVRNKMIPLVKVLWRNHNTEEATWETEQAMKAQYPYLFTSSP

Homology

[Close]

BLAST of IVF0002686 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 2.0e-20
Identity = 92/404 (22.77%), Postives = 155/404 (38.37%), Query Frame = 0


Query: 26   DRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKC-DRLCVPSDQTIKDQILEEAH 85
            ++++    +D +L  L     +    N  L+ DG L+   D++ +P+D  +   I+++ H
Sbjct: 862  NQVVTEYTNDTKLLNLLNNEDKRVEENIQLK-DGLLINSKDQILLPNDTQLTRTIIKKYH 921

Query: 86   SSAYAMHPGSTKVYRTLKKHYWWPGIKREIADYVAKCLICQQVKPERQRPAGLLNPLPVP 145
                 +HPG   +   + + + W GI+++I +YV  C  CQ  K    +P G L P+P  
Sbjct: 922  EEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPS 981

Query: 146  EWKWEHVTMDFHLGLPRTTNGN-------------------------------------- 205
            E  WE ++MDF   LP ++  N                                      
Sbjct: 982  ERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAY 1041

Query: 206  -----------------------------------------DGIWFKGN----------- 265
                                                     DG   + N           
Sbjct: 1042 FGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVC 1101

Query: 266  ------WDAHLSLMEFAYNNSFHSSIGMARYEAL--YGRCCRTLVCWNEVGERKLVGLEL 325
                  W  H+SL++ +YNN+ HS+  M  +E +  Y      L   +   +      E 
Sbjct: 1102 STHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQET 1161

Query: 326  VQITSENVKIIRERLKTAQDRKKSYADKRRRDL-EFEVSDKVFLKLSPWKGVLRFGKKGK 329
            +Q+     + ++E L T   + K Y D + +++ EF+  D V +K +   G L   K  K
Sbjct: 1162 IQV----FQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTK-TGFLH--KSNK 1221

[Close]

BLAST of IVF0002686 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 2.0e-20
Identity = 92/404 (22.77%), Postives = 155/404 (38.37%), Query Frame = 0


Query: 26   DRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKC-DRLCVPSDQTIKDQILEEAH 85
            ++++    +D +L  L     +    N  L+ DG L+   D++ +P+D  +   I+++ H
Sbjct: 862  NQVVTEYTNDTKLLNLLNNEDKRVEENIQLK-DGLLINSKDQILLPNDTQLTRTIIKKYH 921

Query: 86   SSAYAMHPGSTKVYRTLKKHYWWPGIKREIADYVAKCLICQQVKPERQRPAGLLNPLPVP 145
                 +HPG   +   + + + W GI+++I +YV  C  CQ  K    +P G L P+P  
Sbjct: 922  EEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPS 981

Query: 146  EWKWEHVTMDFHLGLPRTTNGN-------------------------------------- 205
            E  WE ++MDF   LP ++  N                                      
Sbjct: 982  ERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAY 1041

Query: 206  -----------------------------------------DGIWFKGN----------- 265
                                                     DG   + N           
Sbjct: 1042 FGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVC 1101

Query: 266  ------WDAHLSLMEFAYNNSFHSSIGMARYEAL--YGRCCRTLVCWNEVGERKLVGLEL 325
                  W  H+SL++ +YNN+ HS+  M  +E +  Y      L   +   +      E 
Sbjct: 1102 STHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQET 1161

Query: 326  VQITSENVKIIRERLKTAQDRKKSYADKRRRDL-EFEVSDKVFLKLSPWKGVLRFGKKGK 329
            +Q+     + ++E L T   + K Y D + +++ EF+  D V +K +   G L   K  K
Sbjct: 1162 IQV----FQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTK-TGFLH--KSNK 1221

[Close]

BLAST of IVF0002686 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 2.0e-20
Identity = 92/404 (22.77%), Postives = 155/404 (38.37%), Query Frame = 0


Query: 26   DRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKC-DRLCVPSDQTIKDQILEEAH 85
            ++++    +D +L  L     +    N  L+ DG L+   D++ +P+D  +   I+++ H
Sbjct: 862  NQVVTEYTNDTKLLNLLNNEDKRVEENIQLK-DGLLINSKDQILLPNDTQLTRTIIKKYH 921

Query: 86   SSAYAMHPGSTKVYRTLKKHYWWPGIKREIADYVAKCLICQQVKPERQRPAGLLNPLPVP 145
                 +HPG   +   + + + W GI+++I +YV  C  CQ  K    +P G L P+P  
Sbjct: 922  EEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPS 981

Query: 146  EWKWEHVTMDFHLGLPRTTNGN-------------------------------------- 205
            E  WE ++MDF   LP ++  N                                      
Sbjct: 982  ERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAY 1041

Query: 206  -----------------------------------------DGIWFKGN----------- 265
                                                     DG   + N           
Sbjct: 1042 FGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVC 1101

Query: 266  ------WDAHLSLMEFAYNNSFHSSIGMARYEAL--YGRCCRTLVCWNEVGERKLVGLEL 325
                  W  H+SL++ +YNN+ HS+  M  +E +  Y      L   +   +      E 
Sbjct: 1102 STHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQET 1161

Query: 326  VQITSENVKIIRERLKTAQDRKKSYADKRRRDL-EFEVSDKVFLKLSPWKGVLRFGKKGK 329
            +Q+     + ++E L T   + K Y D + +++ EF+  D V +K +   G L   K  K
Sbjct: 1162 IQV----FQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTK-TGFLH--KSNK 1221

[Close]

BLAST of IVF0002686 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 2.0e-20
Identity = 92/404 (22.77%), Postives = 155/404 (38.37%), Query Frame = 0


Query: 26   DRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKC-DRLCVPSDQTIKDQILEEAH 85
            ++++    +D +L  L     +    N  L+ DG L+   D++ +P+D  +   I+++ H
Sbjct: 862  NQVVTEYTNDTKLLNLLNNEDKRVEENIQLK-DGLLINSKDQILLPNDTQLTRTIIKKYH 921

Query: 86   SSAYAMHPGSTKVYRTLKKHYWWPGIKREIADYVAKCLICQQVKPERQRPAGLLNPLPVP 145
                 +HPG   +   + + + W GI+++I +YV  C  CQ  K    +P G L P+P  
Sbjct: 922  EEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPS 981

Query: 146  EWKWEHVTMDFHLGLPRTTNGN-------------------------------------- 205
            E  WE ++MDF   LP ++  N                                      
Sbjct: 982  ERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAY 1041

Query: 206  -----------------------------------------DGIWFKGN----------- 265
                                                     DG   + N           
Sbjct: 1042 FGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVC 1101

Query: 266  ------WDAHLSLMEFAYNNSFHSSIGMARYEAL--YGRCCRTLVCWNEVGERKLVGLEL 325
                  W  H+SL++ +YNN+ HS+  M  +E +  Y      L   +   +      E 
Sbjct: 1102 STHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQET 1161

Query: 326  VQITSENVKIIRERLKTAQDRKKSYADKRRRDL-EFEVSDKVFLKLSPWKGVLRFGKKGK 329
            +Q+     + ++E L T   + K Y D + +++ EF+  D V +K +   G L   K  K
Sbjct: 1162 IQV----FQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTK-TGFLH--KSNK 1221

[Close]

BLAST of IVF0002686 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 2.0e-20
Identity = 92/404 (22.77%), Postives = 155/404 (38.37%), Query Frame = 0


Query: 26   DRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKC-DRLCVPSDQTIKDQILEEAH 85
            ++++    +D +L  L     +    N  L+ DG L+   D++ +P+D  +   I+++ H
Sbjct: 862  NQVVTEYTNDTKLLNLLNNEDKRVEENIQLK-DGLLINSKDQILLPNDTQLTRTIIKKYH 921

Query: 86   SSAYAMHPGSTKVYRTLKKHYWWPGIKREIADYVAKCLICQQVKPERQRPAGLLNPLPVP 145
                 +HPG   +   + + + W GI+++I +YV  C  CQ  K    +P G L P+P  
Sbjct: 922  EEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPS 981

Query: 146  EWKWEHVTMDFHLGLPRTTNGN-------------------------------------- 205
            E  WE ++MDF   LP ++  N                                      
Sbjct: 982  ERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAY 1041

Query: 206  -----------------------------------------DGIWFKGN----------- 265
                                                     DG   + N           
Sbjct: 1042 FGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVC 1101

Query: 266  ------WDAHLSLMEFAYNNSFHSSIGMARYEAL--YGRCCRTLVCWNEVGERKLVGLEL 325
                  W  H+SL++ +YNN+ HS+  M  +E +  Y      L   +   +      E 
Sbjct: 1102 STHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQET 1161

Query: 326  VQITSENVKIIRERLKTAQDRKKSYADKRRRDL-EFEVSDKVFLKLSPWKGVLRFGKKGK 329
            +Q+     + ++E L T   + K Y D + +++ EF+  D V +K +   G L   K  K
Sbjct: 1162 IQV----FQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTK-TGFLH--KSNK 1221

[Close]

BLAST of IVF0002686 vs. ExPASy TrEMBL
Match: A0A5A7UK27 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold460G00120 PE=4 SV=1)

HSP 1 Score: 798.1 bits (2060), Expect = 1.7e-227
Identity = 404/475 (85.05%), Postives = 404/475 (85.05%), Query Frame = 0


Query: 1   MGEAAVSVGKLESLVAHFQVRPFLIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGA 60
           MGEAAVSVGKLESLVAHFQVRPFLIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGA
Sbjct: 298 MGEAAVSVGKLESLVAHFQVRPFLIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGA 357

Query: 61  LMKCDRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRTLKKHYWWPGIKREIADYVAK 120
           LMKCDRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRTLKKHYWWPGIKREIADYVAK
Sbjct: 358 LMKCDRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRTLKKHYWWPGIKREIADYVAK 417

Query: 121 CLICQQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGNDGIW---------- 180
           CLICQQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGNDGIW          
Sbjct: 418 CLICQQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGNDGIWVIVDRLTKTA 477

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 478 RFLPVKVTFTLDKLAKLYVDKIVSAYGAPISIVSDRDSKFTSKFWPSLQQALDMLRACAL 537

Query: 241 -FKGNWDAHLSLMEFAYNNSFHSSIGMARYEALYGRCCRTLVCWNEVGERKLVGLELVQI 300
            FKGNWDAHLSLMEFAYNNSFHSSIGMARYEALYGRCCRTLVCWNEVGERKLVGLELVQI
Sbjct: 538 QFKGNWDAHLSLMEFAYNNSFHSSIGMARYEALYGRCCRTLVCWNEVGERKLVGLELVQI 597

Query: 301 TSENVKIIRERLKTAQDRKKSYADKRRRDLEFEVSDKVFLKLSPWKGVLRFGKKGKLSPR 360
           TSENVKIIRERLKTAQDRKKSYADKRRRDLEFEVSDKVFLKLSPWKGVLRFGKKGKLSPR
Sbjct: 598 TSENVKIIRERLKTAQDRKKSYADKRRRDLEFEVSDKVFLKLSPWKGVLRFGKKGKLSPR 657

Query: 361 FIGPYEILERIGPVTYRLALPMELSRIPDVFHVSMLRKYVPDPAHILEAQPVHLKENLSY 405
           FIGPYEILERIGPVTYRLALPMELSRIPDVFHVSMLRKYVPDPAHILEAQPVHLKENLSY
Sbjct: 658 FIGPYEILERIGPVTYRLALPMELSRIPDVFHVSMLRKYVPDPAHILEAQPVHLKENLSY 717

[Close]

BLAST of IVF0002686 vs. ExPASy TrEMBL
Match: A0A5D3DHF7 (Putative DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold334G00600 PE=4 SV=1)

HSP 1 Score: 589.3 bits (1518), Expect = 1.2e-164
Identity = 312/399 (78.20%), Postives = 331/399 (82.96%), Query Frame = 0


Query: 1   MGEAAVSVGKLESLVAHFQVRPFLIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGA 60
           MGEAAVS+GKL SL+ HFQVRP LIDRIIKAQLDDARLRKLAE+VRQNQRLNYSLRGDGA
Sbjct: 228 MGEAAVSIGKLGSLIVHFQVRPILIDRIIKAQLDDARLRKLAEDVRQNQRLNYSLRGDGA 287

Query: 61  LMKCDRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRTLKKHYWWPGIKREIADYVAK 120
           LMK DRLCVPSDQTIKDQILEEAHSSAY MHPGSTKVY+TLKKH    G      D +AK
Sbjct: 288 LMKYDRLCVPSDQTIKDQILEEAHSSAYIMHPGSTKVYKTLKKH---GGQVTFTLDKLAK 347

Query: 121 CLICQQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTTN--GNDGIWFKGNWDAH 180
             + + V            P+ +   +    T  F   L +  +      + FKGNWDAH
Sbjct: 348 LYVDKIVSVYGA-------PVSIVSDRDSRFTSKFWPSLQQALDMLRACALQFKGNWDAH 407

Query: 181 LSLMEFAYNNSFHSSIGMARYEALYGRCCRTLVCWNEVGERKLVGLELVQITSENVKIIR 240
           LSLMEFAYNNSFHSSIGMA YEALYGR CRTLVCW+EVGERKLVG ELVQITSENVKIIR
Sbjct: 408 LSLMEFAYNNSFHSSIGMAPYEALYGRRCRTLVCWDEVGERKLVGPELVQITSENVKIIR 467

Query: 241 ERLKTAQDRKKSYADKRRRDLEFEVSDKVFLKLSPWKGVLRFGKKGKLSPRFIGPYEILE 300
           ERLKTAQDR+KSYADK RRDLEFEV DKVFLKLSPWKGVLRFG+KGKLSPRFI PYEILE
Sbjct: 468 ERLKTAQDRQKSYADKGRRDLEFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIRPYEILE 527

Query: 301 RIGPVTYRLALPMELSRIPDVFHVSMLRKYVPDPAHILEAQPVHLKENLSYEEEPIQILD 360
           RIGPV YRLALPMELSRI DVFHVSMLRKYVPDP+HILEAQPV LKENLSYEEEPIQILD
Sbjct: 528 RIGPVAYRLALPMELSRIHDVFHVSMLRKYVPDPSHILEAQPVQLKENLSYEEEPIQILD 587

Query: 361 KKEQVVRNKMIPLVKVLWRNHNTEEATWETEQAMKAQYP 398
           KKEQV+RNK+IPLVKVLWRNHNTEEATWE EQAMK   P
Sbjct: 588 KKEQVLRNKVIPLVKVLWRNHNTEEATWELEQAMKPTPP 616

[Close]

BLAST of IVF0002686 vs. ExPASy TrEMBL
Match: A0A5A7SQ03 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G002850 PE=4 SV=1)

HSP 1 Score: 563.1 bits (1450), Expect = 9.1e-157
Identity = 295/408 (72.30%), Postives = 328/408 (80.39%), Query Frame = 0


Query: 1   MGEAAVSVGKLESLVAHFQVRPFLIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGA 60
           MGEAAVS+G+L SL+AHFQVRP LIDRIIKAQLDDA +RKLAEEVRQNQRLNYSLRGDGA
Sbjct: 38  MGEAAVSIGQLGSLIAHFQVRPILIDRIIKAQLDDAMMRKLAEEVRQNQRLNYSLRGDGA 97

Query: 61  LMKCDRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRTLKKHYWWPGIKREIADYVAK 120
            MK DRLCVPSDQ IK QIL+EAHSSAYAMHPGSTK+YRTLKKHYWWP +K EIADYVAK
Sbjct: 98  FMKYDRLCVPSDQAIKVQILKEAHSSAYAMHPGSTKMYRTLKKHYWWPTMKCEIADYVAK 157

Query: 121 CLICQQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGNDGIWFKGNWDAHLS 180
           CLICQQVKPERQRPA LLNPLPV EWKWEHVTMDF  GLPRTT G++GIW   +    L 
Sbjct: 158 CLICQQVKPERQRPAELLNPLPVLEWKWEHVTMDFLFGLPRTTIGHEGIWVIVD---RLR 217

Query: 181 LMEFAYNNSFHSSIGMARYEALYGRCCRTLVC---WNEVGERKLVGLE-LVQITSENVKI 240
             +  Y + F S    +  +AL  +   +       ++  ER +  LE +++  +   K 
Sbjct: 218 RQQDFYQSKFTSKFWPSLQQALGTKLLFSTAFHPQTDDQSERTIQTLEDMLRACALQFKD 277

Query: 241 IRERLKTAQDRKKSYADKRRRDLEFEVSDKVFLKLSPWKGVLRFGKKGKLSPRFIGPYEI 300
           + E        K    +KRRR LEFEV DKVFLKLSPWKGVLRFG KGKLSPRFIGPYEI
Sbjct: 278 VVE--LPCAGMKLEKGNKRRRVLEFEVGDKVFLKLSPWKGVLRFGGKGKLSPRFIGPYEI 337

Query: 301 LERIGPVTYRLALPMELSRIPDVFHVSMLRKYVPDPAHILEAQPVHLKENLSYEEEPIQI 360
           LERIGPV +RLALPMELSRI ++FHVSMLRKYVPD ++ILEAQPVHLKENL YEEEPIQI
Sbjct: 338 LERIGPVAHRLALPMELSRIHEIFHVSMLRKYVPDSSYILEAQPVHLKENLYYEEEPIQI 397

Query: 361 LDKKEQVVRNKMIPLVKVLWRNHNTEEATWETEQAMKAQYPYLFTSSP 405
           L KKEQV+RNK+IPLVKVLWRNHNTEEATWETEQAMKAQYP+LFTSSP
Sbjct: 398 LHKKEQVLRNKVIPLVKVLWRNHNTEEATWETEQAMKAQYPHLFTSSP 440

[Close]

BLAST of IVF0002686 vs. ExPASy TrEMBL
Match: A0A5D3DCU0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold305G00110 PE=4 SV=1)

HSP 1 Score: 560.1 bits (1442), Expect = 7.7e-156
Identity = 294/408 (72.06%), Postives = 327/408 (80.15%), Query Frame = 0


Query: 1   MGEAAVSVGKLESLVAHFQVRPFLIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGA 60
           MGEAAVS+G+L SL+AHFQVRP LIDRIIKAQLDDA +RKLAEEVRQNQRLNYSLRGDGA
Sbjct: 38  MGEAAVSIGQLGSLIAHFQVRPILIDRIIKAQLDDAMMRKLAEEVRQNQRLNYSLRGDGA 97

Query: 61  LMKCDRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRTLKKHYWWPGIKREIADYVAK 120
            MK DRLCVPSDQ IK QIL+EAHSSAYAMHPGSTK+YRTLKKHYWWP +K EIADYVAK
Sbjct: 98  FMKYDRLCVPSDQAIKVQILKEAHSSAYAMHPGSTKMYRTLKKHYWWPTMKCEIADYVAK 157

Query: 121 CLICQQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGNDGIWFKGNWDAHLS 180
           CLICQQVKPERQRPA LLNPLPV EWKWEHVTMDF  GLPRTT G++GIW   +    L 
Sbjct: 158 CLICQQVKPERQRPAELLNPLPVLEWKWEHVTMDFLFGLPRTTIGHEGIWVIVD---RLR 217

Query: 181 LMEFAYNNSFHSSIGMARYEALYGRCCRTLVC---WNEVGERKLVGLE-LVQITSENVKI 240
             +  Y + F S    +  +AL  +   +       ++  ER +  LE +++  +   K 
Sbjct: 218 RQQDFYQSKFTSKFWPSLQQALGTKLLFSTAFHPQTDDQSERTIQTLEDMLRACALQFKD 277

Query: 241 IRERLKTAQDRKKSYADKRRRDLEFEVSDKVFLKLSPWKGVLRFGKKGKLSPRFIGPYEI 300
           + E        K    +KRRR LEFEV DKVFLKLSPWKGVLRFG KGKLSPRFIGPYEI
Sbjct: 278 VVE--LPCAGMKLEKGNKRRRVLEFEVGDKVFLKLSPWKGVLRFGGKGKLSPRFIGPYEI 337

Query: 301 LERIGPVTYRLALPMELSRIPDVFHVSMLRKYVPDPAHILEAQPVHLKENLSYEEEPIQI 360
           LERIGPV +RLALPMELSRI ++FHVSMLRKYVPD ++ILEAQPVHLKENL YEEE IQI
Sbjct: 338 LERIGPVAHRLALPMELSRIHEIFHVSMLRKYVPDSSYILEAQPVHLKENLYYEEESIQI 397

Query: 361 LDKKEQVVRNKMIPLVKVLWRNHNTEEATWETEQAMKAQYPYLFTSSP 405
           L KKEQV+RNK+IPLVKVLWRNHNTEEATWETEQAMKAQYP+LFTSSP
Sbjct: 398 LHKKEQVLRNKVIPLVKVLWRNHNTEEATWETEQAMKAQYPHLFTSSP 440

[Close]

BLAST of IVF0002686 vs. ExPASy TrEMBL
Match: A0A5A7UKK4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1371G00030 PE=4 SV=1)

HSP 1 Score: 550.4 bits (1417), Expect = 6.1e-153
Identity = 273/469 (58.21%), Postives = 331/469 (70.58%), Query Frame = 0


Query: 3    EAAVSVGKLESLVAHFQVRPFLIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALM 62
            +A VS     SL+A FQVR  L+  I++ Q +D+ L+K  E+ ++   + + LR DGA++
Sbjct: 1091 KAVVSTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIV 1150

Query: 63   KCDRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRTLKKHYWWPGIKREIADYVAKCL 122
            K  RLCVP+   +K+ ILEEAHSSAYAMHPGSTK+YRTLKK YWW G+K+EIA+YV +CL
Sbjct: 1151 KQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCL 1210

Query: 123  ICQQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGNDGIW------------ 182
            ICQQVKP RQRP G LNPLPVPEWK EH+TMDF  GLPRT++G+DG+W            
Sbjct: 1211 ICQQVKPVRQRPGGFLNPLPVPEWKREHITMDFLFGLPRTSSGHDGVWVIVDRLTKTTRF 1270

Query: 183  ----------------------------------------------------------FK 242
                                                                       K
Sbjct: 1271 IPIKMTSTLDQLARLYVDKIKAMRTGLKFSTSFHPQTDGQFERTIQTLEDMLRACVLLLK 1330

Query: 243  GNWDAHLSLMEFAYNNSFHSSIGMARYEALYGRCCRTLVCWNEVGERKLVGLELVQITSE 302
            G+WD HL LMEFAYNN++ SSIGMA YEA+YGR CRT VCWNEVGERKLVG ELVQIT+ 
Sbjct: 1331 GSWDTHLPLMEFAYNNNYQSSIGMAPYEAIYGRPCRTPVCWNEVGERKLVGPELVQITTN 1390

Query: 303  NVKIIRERLKTAQDRKKSYADKRRRDLEFEVSDKVFLKLSPWKGVLRFGKKGKLSPRFIG 362
            N+K+IRE L+ AQDR+KSYADKRRR+LEFEV D+VFLKLSPW+GV+RFG+KGKLS R+IG
Sbjct: 1391 NIKLIRENLRKAQDRQKSYADKRRRNLEFEVGDQVFLKLSPWRGVIRFGRKGKLSLRYIG 1450

Query: 363  PYEILERIGPVTYRLALPMELSRIPDVFHVSMLRKYVPDPAHILEAQPVHLKENLSYEEE 402
            PY+I ER+GP  YRL LP+EL+RI DVFHVSMLRKY+PDP+H+L+ QPV LKE+LSY EE
Sbjct: 1451 PYQITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLSYVEE 1510

[Close]

BLAST of IVF0002686 vs. NCBI nr
Match: KAA0056222.1 (reverse transcriptase [Cucumis melo var. makuwa] >TYK04055.1 reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 797 bits (2059), Expect = 4.46e-285
Identity = 404/475 (85.05%), Postives = 404/475 (85.05%), Query Frame = 0


Query: 1   MGEAAVSVGKLESLVAHFQVRPFLIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGA 60
           MGEAAVSVGKLESLVAHFQVRPFLIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGA
Sbjct: 298 MGEAAVSVGKLESLVAHFQVRPFLIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGA 357

Query: 61  LMKCDRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRTLKKHYWWPGIKREIADYVAK 120
           LMKCDRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRTLKKHYWWPGIKREIADYVAK
Sbjct: 358 LMKCDRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRTLKKHYWWPGIKREIADYVAK 417

Query: 121 CLICQQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGNDGIW---------- 180
           CLICQQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGNDGIW          
Sbjct: 418 CLICQQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGNDGIWVIVDRLTKTA 477

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 478 RFLPVKVTFTLDKLAKLYVDKIVSAYGAPISIVSDRDSKFTSKFWPSLQQALDMLRACAL 537

Query: 241 -FKGNWDAHLSLMEFAYNNSFHSSIGMARYEALYGRCCRTLVCWNEVGERKLVGLELVQI 300
            FKGNWDAHLSLMEFAYNNSFHSSIGMARYEALYGRCCRTLVCWNEVGERKLVGLELVQI
Sbjct: 538 QFKGNWDAHLSLMEFAYNNSFHSSIGMARYEALYGRCCRTLVCWNEVGERKLVGLELVQI 597

Query: 301 TSENVKIIRERLKTAQDRKKSYADKRRRDLEFEVSDKVFLKLSPWKGVLRFGKKGKLSPR 360
           TSENVKIIRERLKTAQDRKKSYADKRRRDLEFEVSDKVFLKLSPWKGVLRFGKKGKLSPR
Sbjct: 598 TSENVKIIRERLKTAQDRKKSYADKRRRDLEFEVSDKVFLKLSPWKGVLRFGKKGKLSPR 657

Query: 361 FIGPYEILERIGPVTYRLALPMELSRIPDVFHVSMLRKYVPDPAHILEAQPVHLKENLSY 404
           FIGPYEILERIGPVTYRLALPMELSRIPDVFHVSMLRKYVPDPAHILEAQPVHLKENLSY
Sbjct: 658 FIGPYEILERIGPVTYRLALPMELSRIPDVFHVSMLRKYVPDPAHILEAQPVHLKENLSY 717

[Close]

BLAST of IVF0002686 vs. NCBI nr
Match: KAA0042458.1 (putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK22918.1 putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 588 bits (1515), Expect = 1.54e-203
Identity = 312/399 (78.20%), Postives = 332/399 (83.21%), Query Frame = 0


Query: 1   MGEAAVSVGKLESLVAHFQVRPFLIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGA 60
           MGEAAVS+GKL SL+ HFQVRP LIDRIIKAQLDDARLRKLAE+VRQNQRLNYSLRGDGA
Sbjct: 228 MGEAAVSIGKLGSLIVHFQVRPILIDRIIKAQLDDARLRKLAEDVRQNQRLNYSLRGDGA 287

Query: 61  LMKCDRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRTLKKHYWWPGIKREIADYVAK 120
           LMK DRLCVPSDQTIKDQILEEAHSSAY MHPGSTKVY+TLKKH    G      D +AK
Sbjct: 288 LMKYDRLCVPSDQTIKDQILEEAHSSAYIMHPGSTKVYKTLKKH---GGQVTFTLDKLAK 347

Query: 121 CLICQQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTTN--GNDGIWFKGNWDAH 180
            L   ++      P  +++       +    T  F   L +  +      + FKGNWDAH
Sbjct: 348 -LYVDKIVSVYGAPVSIVSD------RDSRFTSKFWPSLQQALDMLRACALQFKGNWDAH 407

Query: 181 LSLMEFAYNNSFHSSIGMARYEALYGRCCRTLVCWNEVGERKLVGLELVQITSENVKIIR 240
           LSLMEFAYNNSFHSSIGMA YEALYGR CRTLVCW+EVGERKLVG ELVQITSENVKIIR
Sbjct: 408 LSLMEFAYNNSFHSSIGMAPYEALYGRRCRTLVCWDEVGERKLVGPELVQITSENVKIIR 467

Query: 241 ERLKTAQDRKKSYADKRRRDLEFEVSDKVFLKLSPWKGVLRFGKKGKLSPRFIGPYEILE 300
           ERLKTAQDR+KSYADK RRDLEFEV DKVFLKLSPWKGVLRFG+KGKLSPRFI PYEILE
Sbjct: 468 ERLKTAQDRQKSYADKGRRDLEFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIRPYEILE 527

Query: 301 RIGPVTYRLALPMELSRIPDVFHVSMLRKYVPDPAHILEAQPVHLKENLSYEEEPIQILD 360
           RIGPV YRLALPMELSRI DVFHVSMLRKYVPDP+HILEAQPV LKENLSYEEEPIQILD
Sbjct: 528 RIGPVAYRLALPMELSRIHDVFHVSMLRKYVPDPSHILEAQPVQLKENLSYEEEPIQILD 587

Query: 361 KKEQVVRNKMIPLVKVLWRNHNTEEATWETEQAMKAQYP 397
           KKEQV+RNK+IPLVKVLWRNHNTEEATWE EQAMK   P
Sbjct: 588 KKEQVLRNKVIPLVKVLWRNHNTEEATWELEQAMKPTPP 616

[Close]

BLAST of IVF0002686 vs. NCBI nr
Match: KAA0026281.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 562 bits (1449), Expect = 1.87e-197
Identity = 297/408 (72.79%), Postives = 330/408 (80.88%), Query Frame = 0


Query: 1   MGEAAVSVGKLESLVAHFQVRPFLIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGA 60
           MGEAAVS+G+L SL+AHFQVRP LIDRIIKAQLDDA +RKLAEEVRQNQRLNYSLRGDGA
Sbjct: 38  MGEAAVSIGQLGSLIAHFQVRPILIDRIIKAQLDDAMMRKLAEEVRQNQRLNYSLRGDGA 97

Query: 61  LMKCDRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRTLKKHYWWPGIKREIADYVAK 120
            MK DRLCVPSDQ IK QIL+EAHSSAYAMHPGSTK+YRTLKKHYWWP +K EIADYVAK
Sbjct: 98  FMKYDRLCVPSDQAIKVQILKEAHSSAYAMHPGSTKMYRTLKKHYWWPTMKCEIADYVAK 157

Query: 121 CLICQQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGNDGIWFKGNWDAHLS 180
           CLICQQVKPERQRPA LLNPLPV EWKWEHVTMDF  GLPRTT G++GIW   +    L 
Sbjct: 158 CLICQQVKPERQRPAELLNPLPVLEWKWEHVTMDFLFGLPRTTIGHEGIWVIVD---RLR 217

Query: 181 LMEFAYNNSFHSSIGMARYEALYGRCCRTLVCW---NEVGERKLVGLE-LVQITSENVKI 240
             +  Y + F S    +  +AL  +   +       ++  ER +  LE +++  +   K 
Sbjct: 218 RQQDFYQSKFTSKFWPSLQQALGTKLLFSTAFHPQTDDQSERTIQTLEDMLRACALQFKD 277

Query: 241 IRERLKTAQDRKKSYADKRRRDLEFEVSDKVFLKLSPWKGVLRFGKKGKLSPRFIGPYEI 300
           + E L  A   K    +KRRR LEFEV DKVFLKLSPWKGVLRFG KGKLSPRFIGPYEI
Sbjct: 278 VVE-LPCA-GMKLEKGNKRRRVLEFEVGDKVFLKLSPWKGVLRFGGKGKLSPRFIGPYEI 337

Query: 301 LERIGPVTYRLALPMELSRIPDVFHVSMLRKYVPDPAHILEAQPVHLKENLSYEEEPIQI 360
           LERIGPV +RLALPMELSRI ++FHVSMLRKYVPD ++ILEAQPVHLKENL YEEEPIQI
Sbjct: 338 LERIGPVAHRLALPMELSRIHEIFHVSMLRKYVPDSSYILEAQPVHLKENLYYEEEPIQI 397

Query: 361 LDKKEQVVRNKMIPLVKVLWRNHNTEEATWETEQAMKAQYPYLFTSSP 404
           L KKEQV+RNK+IPLVKVLWRNHNTEEATWETEQAMKAQYP+LFTSSP
Sbjct: 398 LHKKEQVLRNKVIPLVKVLWRNHNTEEATWETEQAMKAQYPHLFTSSP 440

[Close]

BLAST of IVF0002686 vs. NCBI nr
Match: TYK21477.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 559 bits (1441), Expect = 3.07e-196
Identity = 296/408 (72.55%), Postives = 329/408 (80.64%), Query Frame = 0


Query: 1   MGEAAVSVGKLESLVAHFQVRPFLIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGA 60
           MGEAAVS+G+L SL+AHFQVRP LIDRIIKAQLDDA +RKLAEEVRQNQRLNYSLRGDGA
Sbjct: 38  MGEAAVSIGQLGSLIAHFQVRPILIDRIIKAQLDDAMMRKLAEEVRQNQRLNYSLRGDGA 97

Query: 61  LMKCDRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRTLKKHYWWPGIKREIADYVAK 120
            MK DRLCVPSDQ IK QIL+EAHSSAYAMHPGSTK+YRTLKKHYWWP +K EIADYVAK
Sbjct: 98  FMKYDRLCVPSDQAIKVQILKEAHSSAYAMHPGSTKMYRTLKKHYWWPTMKCEIADYVAK 157

Query: 121 CLICQQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGNDGIWFKGNWDAHLS 180
           CLICQQVKPERQRPA LLNPLPV EWKWEHVTMDF  GLPRTT G++GIW   +    L 
Sbjct: 158 CLICQQVKPERQRPAELLNPLPVLEWKWEHVTMDFLFGLPRTTIGHEGIWVIVD---RLR 217

Query: 181 LMEFAYNNSFHSSIGMARYEALYGRCCRTLVCW---NEVGERKLVGLE-LVQITSENVKI 240
             +  Y + F S    +  +AL  +   +       ++  ER +  LE +++  +   K 
Sbjct: 218 RQQDFYQSKFTSKFWPSLQQALGTKLLFSTAFHPQTDDQSERTIQTLEDMLRACALQFKD 277

Query: 241 IRERLKTAQDRKKSYADKRRRDLEFEVSDKVFLKLSPWKGVLRFGKKGKLSPRFIGPYEI 300
           + E L  A   K    +KRRR LEFEV DKVFLKLSPWKGVLRFG KGKLSPRFIGPYEI
Sbjct: 278 VVE-LPCA-GMKLEKGNKRRRVLEFEVGDKVFLKLSPWKGVLRFGGKGKLSPRFIGPYEI 337

Query: 301 LERIGPVTYRLALPMELSRIPDVFHVSMLRKYVPDPAHILEAQPVHLKENLSYEEEPIQI 360
           LERIGPV +RLALPMELSRI ++FHVSMLRKYVPD ++ILEAQPVHLKENL YEEE IQI
Sbjct: 338 LERIGPVAHRLALPMELSRIHEIFHVSMLRKYVPDSSYILEAQPVHLKENLYYEEESIQI 397

Query: 361 LDKKEQVVRNKMIPLVKVLWRNHNTEEATWETEQAMKAQYPYLFTSSP 404
           L KKEQV+RNK+IPLVKVLWRNHNTEEATWETEQAMKAQYP+LFTSSP
Sbjct: 398 LHKKEQVLRNKVIPLVKVLWRNHNTEEATWETEQAMKAQYPHLFTSSP 440

[Close]

BLAST of IVF0002686 vs. NCBI nr
Match: KAA0053246.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 547 bits (1410), Expect = 7.27e-189
Identity = 275/496 (55.44%), Postives = 333/496 (67.14%), Query Frame = 0


Query: 3   EAAVSVGKLESLVAHFQVRPFLIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALM 62
           +A V+     SL+A FQVR  L+  I++ Q +D+ L+K  E+ ++   + + LR DGA++
Sbjct: 123 KAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIV 182

Query: 63  KCDRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRTLKKHYWWPGIKREIADYVAKCL 122
           K  RLCVP+   +K+ ILEEAHSSAYAMHPGSTK+YRTLKK YWW G+K+EIA+YV +CL
Sbjct: 183 KQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCL 242

Query: 123 ICQQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGNDGIW------------ 182
           ICQQVKP RQRP G LNPLPVPEWKWEH+TMDF  GLPRT++G+DGIW            
Sbjct: 243 ICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRF 302

Query: 183 ------------------------------------------------------------ 242
                                                                       
Sbjct: 303 IPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSF 362

Query: 243 -------------------------FKGNWDAHLSLMEFAYNNSFHSSIGMARYEALYGR 302
                                     KG+WD HL LMEFAYNN++ SSIGMA YEALYGR
Sbjct: 363 HPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGR 422

Query: 303 CCRTLVCWNEVGERKLVGLELVQITSENVKIIRERLKTAQDRKKSYADKRRRDLEFEVSD 362
            CRT VCWNEVGERKLVG ELVQIT+ N+K+IRE L+ AQDR+KSYADKRRR+LEF+V D
Sbjct: 423 PCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGD 482

Query: 363 KVFLKLSPWKGVLRFGKKGKLSPRFIGPYEILERIGPVTYRLALPMELSRIPDVFHVSML 401
           +VFLKLSPW+GV+RFG+KGKLSPR+IGPY+I ER+GP  YRL LP+EL+RI DVFHVSML
Sbjct: 483 QVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARIHDVFHVSML 542

The following BLAST results are available for this feature:

BLAST of IVF0002686 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	2.0e-20	22.77	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	2.0e-20	22.77	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	2.0e-20	22.77	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	2.0e-20	22.77	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	2.0e-20	22.77	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of IVF0002686 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UK27	1.7e-227	85.05	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46...	[more]
A0A5D3DHF7	1.2e-164	78.20	Putative DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=...	[more]
A0A5A7SQ03	9.1e-157	72.30	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19...	[more]
A0A5D3DCU0	7.7e-156	72.06	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold30...	[more]
A0A5A7UKK4	6.1e-153	58.21	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13...	[more]

BLAST of IVF0002686 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0056222.1	4.46e-285	85.05	reverse transcriptase [Cucumis melo var. makuwa] >TYK04055.1 reverse transcripta...	[more]
KAA0042458.1	1.54e-203	78.20	putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK...	[more]
KAA0026281.1	1.87e-197	72.79	reverse transcriptase [Cucumis melo var. makuwa]	[more]
TYK21477.1	3.07e-196	72.55	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0053246.1	7.27e-189	55.44	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]

BLAST of IVF0002686 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 234..254
None	No IPR available	GENE3D	1.10.340.70		coord: 37..128 e-value: 1.8E-19 score: 71.7
None	No IPR available	PANTHER	PTHR46148	FAMILY NOT NAMED	coord: 171..396
None	No IPR available	PANTHER	PTHR46148:SF18	IPP TRANSFERASE	coord: 171..396
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 169..239 e-value: 1.1E-6 score: 30.1
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 73..129 e-value: 6.2E-19 score: 67.8
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 315..394

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0002686.2	IVF0002686.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity