IVF0002221 (gene) Melon (IVF77) v1

Overview
NameIVF0002221
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr05: 23899946 .. 23900188 (-)
RNA-Seq ExpressionIVF0002221
SyntenyIVF0002221
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGGCTCGGCTACGCGGAAACGCGCGGCGCGGCTTCCCACGCGGACGCGGCTCACACGCGGAGAGGGCTGGACGCGGCGCGGCTTCGGTTTCGGCTTCGGGCGCGCGGGCGTGGAGCGGCTCCGGGTTCGTTCGTCGGCTGGAGGCACGCGCGGCGGATCGGCTTCGAGTGGCGGCTGCGGGAGACGGCTGGGCGCGGATCGAAGCGGCTCCCTTCGGCTCGATCGGAGCGGCGCGGCTGA

mRNA sequence

ATGCGGCTCGGCTACGCGGAAACGCGCGGCGCGGCTTCCCACGCGGACGCGGCTCACACGCGGAGAGGGCTGGACGCGGCGCGGCTTCGGTTTCGGCTTCGGGCGCGCGGGCGTGGAGCGGCTCCGGGTTCGTTCGTCGGCTGGAGGCACGCGCGGCGGATCGGCTTCGAGTGGCGGCTGCGGGAGACGGCTGGGCGCGGATCGAAGCGGCTCCCTTCGGCTCGATCGGAGCGGCGCGGCTGA

Coding sequence (CDS)

ATGCGGCTCGGCTACGCGGAAACGCGCGGCGCGGCTTCCCACGCGGACGCGGCTCACACGCGGAGAGGGCTGGACGCGGCGCGGCTTCGGTTTCGGCTTCGGGCGCGCGGGCGTGGAGCGGCTCCGGGTTCGTTCGTCGGCTGGAGGCACGCGCGGCGGATCGGCTTCGAGTGGCGGCTGCGGGAGACGGCTGGGCGCGGATCGAAGCGGCTCCCTTCGGCTCGATCGGAGCGGCGCGGCTGA

Protein sequence

MRLGYAETRGAASHADAAHTRRGLDAARLRFRLRARGRGAAPGSFVGWRHARRIGFEWRLRETAGRGSKRLPSARSERRG
Homology
BLAST of IVF0002221 vs. ExPASy TrEMBL
Match: A0A5A7UMB9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold226G00500 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.7e-30
Identity = 75/79 (94.94%), Postives = 75/79 (94.94%), Query Frame = 0

Query: 2   RLGYAETRGAASHADAAHTRRGLDAARLRFRLRARGRGAAPGSFVGWRHARRIGFEWRLR 61
           RLGY E RGAASHADAAHTRRGLDAA LRFRLRARGRGAAPGSFVGWRHARRIGFEWRLR
Sbjct: 90  RLGYTEARGAASHADAAHTRRGLDAA-LRFRLRARGRGAAPGSFVGWRHARRIGFEWRLR 149

Query: 62  ETAGRGSKRLPSARSERRG 81
           ETA RGSKRLPSARSERRG
Sbjct: 150 ETAVRGSKRLPSARSERRG 167

BLAST of IVF0002221 vs. ExPASy TrEMBL
Match: A0A5A7UMD8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold226G00260 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.7e-30
Identity = 75/79 (94.94%), Postives = 75/79 (94.94%), Query Frame = 0

Query: 2   RLGYAETRGAASHADAAHTRRGLDAARLRFRLRARGRGAAPGSFVGWRHARRIGFEWRLR 61
           RLGY E RGAASHADAAHTRRGLDAA LRFRLRARGRGAAPGSFVGWRHARRIGFEWRLR
Sbjct: 90  RLGYTEARGAASHADAAHTRRGLDAA-LRFRLRARGRGAAPGSFVGWRHARRIGFEWRLR 149

Query: 62  ETAGRGSKRLPSARSERRG 81
           ETA RGSKRLPSARSERRG
Sbjct: 150 ETAVRGSKRLPSARSERRG 167

BLAST of IVF0002221 vs. ExPASy TrEMBL
Match: A0A5A7UR82 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold741G00080 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.7e-04
Identity = 44/80 (55.00%), Postives = 49/80 (61.25%), Query Frame = 0

Query: 1   MRLGYAETRGAASHADAAHTRRGLDAARLRFRLRARGRGAAPGSFVGW--RHARRIGFE- 60
           MRLGYA+TRGAASH DAAHTRRGLD ARL      RG  AA G   GW  R   R G + 
Sbjct: 37  MRLGYAKTRGAASHTDAAHTRRGLDVARLHAERVGRG-AAARGE--GWTRRGCTRRGLDA 96

Query: 61  --WRLRETAGRGSKRLPSAR 76
              RLR  A R  +R+ +AR
Sbjct: 97  ARLRLRLRA-RXXRRIYAAR 112

BLAST of IVF0002221 vs. NCBI nr
Match: KAA0056280.1 (uncharacterized protein E6C27_scaffold226G00500 [Cucumis melo var. makuwa])

HSP 1 Score: 139 bits (350), Expect = 1.11e-37
Identity = 75/79 (94.94%), Postives = 75/79 (94.94%), Query Frame = 0

Query: 2   RLGYAETRGAASHADAAHTRRGLDAARLRFRLRARGRGAAPGSFVGWRHARRIGFEWRLR 61
           RLGY E RGAASHADAAHTRRGLDAA LRFRLRARGRGAAPGSFVGWRHARRIGFEWRLR
Sbjct: 90  RLGYTEARGAASHADAAHTRRGLDAA-LRFRLRARGRGAAPGSFVGWRHARRIGFEWRLR 149

Query: 62  ETAGRGSKRLPSARSERRG 80
           ETA RGSKRLPSARSERRG
Sbjct: 150 ETAVRGSKRLPSARSERRG 167

BLAST of IVF0002221 vs. NCBI nr
Match: KAA0056258.1 (hypothetical protein E6C27_scaffold226G00260 [Cucumis melo var. makuwa])

HSP 1 Score: 139 bits (350), Expect = 2.40e-37
Identity = 75/79 (94.94%), Postives = 75/79 (94.94%), Query Frame = 0

Query: 2   RLGYAETRGAASHADAAHTRRGLDAARLRFRLRARGRGAAPGSFVGWRHARRIGFEWRLR 61
           RLGY E RGAASHADAAHTRRGLDAA LRFRLRARGRGAAPGSFVGWRHARRIGFEWRLR
Sbjct: 90  RLGYTEARGAASHADAAHTRRGLDAA-LRFRLRARGRGAAPGSFVGWRHARRIGFEWRLR 149

Query: 62  ETAGRGSKRLPSARSERRG 80
           ETA RGSKRLPSARSERRG
Sbjct: 150 ETAVRGSKRLPSARSERRG 167

BLAST of IVF0002221 vs. NCBI nr
Match: KAA0057147.1 (hypothetical protein E6C27_scaffold741G00080 [Cucumis melo var. makuwa])

HSP 1 Score: 53.5 bits (127), Expect = 1.71e-06
Identity = 33/48 (68.75%), Postives = 34/48 (70.83%), Query Frame = 0

Query: 1  MRLGYAETRGAASHADAAHTRRGLDAARLRFRLRARGRGAAPGSFVGW 48
          MRLGYA+TRGAASH DAAHTRRGLD ARL      RG  AA G   GW
Sbjct: 37 MRLGYAKTRGAASHTDAAHTRRGLDVARLHAERVGRG-AAARGE--GW 81

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7UMB91.7e-3094.94Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7UMD81.7e-3094.94Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7UR822.7e-0455.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
KAA0056280.11.11e-3794.94uncharacterized protein E6C27_scaffold226G00500 [Cucumis melo var. makuwa][more]
KAA0056258.12.40e-3794.94hypothetical protein E6C27_scaffold226G00260 [Cucumis melo var. makuwa][more]
KAA0057147.11.71e-0668.75hypothetical protein E6C27_scaffold741G00080 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0002221.1IVF0002221.1mRNA