IVF0002165 (gene) Melon (IVF77) v1

Overview


Name	IVF0002165
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	RNA polymerase I-specific transcription initiation factor RRN3
Location	tig00000267: 259098 .. 266572 (+)
RNA-Seq Expression	IVF0002165
Synteny	IVF0002165

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGTATCTTCTCAATCTCTTCCTCAGCGCCGTTGGTCTCCTCTGCTCAGGTTATCACTTCTAAACCGTCCGTCTTCCTCTTCTCAATCTCTTCATCTTCTCACTTCTCAGTCGTCTGACTCATCTCCCTCTTGTAAATCCTTTATCTTCTCCTTCTATAACTTTATCATCCTTTCCTTTCCATCAACATTCAATCTTTTTTGTTTTAGGATTCTGTTTATCTCTTGGTAATCCATATACAGCTTCCCAATCGATTCTCCTTTCTACTTTTCTAACTTTTTTCCTTCATCTGATGCTTCCTTGCTGCTCTTCTTCATTCTGTTGTTTACGGGTTGGGTGGGGTTGTAAACTTAATTTTGTTCGGGTAAACCAACCCAACAAACACGAAAATCTGATGGCAAGGTGGTCTATTCACAGTGTCATGTGATGAGAATAGTTGTTGTTTCTGCGTTAGTTCATGTCTTCAAAATTTTTGTTTCGTGTTTTTGTTTTGATAAAAGCTCCGAAGCTAGCAAGTTTGCTCTCATTTTGATGATTATCTCGTTCTAATGTTTCTTTGAATTATTTATTTTTGTATGAATCAATTATTTTAACGATGTTCCTAATAAAATACTTACTCATGTTTTCTGTAAACGAACCCTTTTCTTCCAGTTTGTTTTGAGTTTGACTTATCATGCACGAAGGAATGTTATTTACTTTTTATTTTCCCTAATTATTTTGTTTGAATCCTTTTTTCAACTGTCTTCATGTTTCAGGTTTGAATTTCATCCTGTTCCCAGCCCCCACTGTGACGATAGGATTTCAATAGGGGCCGGGCATTAATCATGGGGGCGGAACTGGAAAATAATCAGGCTCAGTTGCACGATATGGAGGATGTTAATCTCACAGATGCCCAGTTAGTTGATTTCATTAGGGGTTTTCTTAGTTCAGTGTCACTGGTATTATTCTCTTAAAATCATCATTGGTCTTTACTTAAATGAAAGATCATATAGCAATTGATTTTCGAAGTGCACTCTCGTAGTTTATTATTTGGGATGTGATTTTGAGTTCTCACTGCTAATCGAGTTGTTTTTTTGAGGAATAACTGTTGTAACCTTATGAAATCTCTTCCATTGGTGTAGGGAGATACTGATGGGTATAACCAGCTTGTTGGTGTTATACACCACAGAGATCGACTATCTCCCGACGAGGTTGCCTTGCTCGTGGTATGCCCTTTAGAACACATCTGTTTTTGACAAATGATAAGAGATTTAATTTCATGTAAAATACTATCTAGTTTTTAACTCACTTGATGTGCTTAACAGACATGTTTGAAGGCACTATCTGGAGCAGTTTCTTGTATAGATATCATTCAACACGAATCTCTGCTTGCAGCAGTAAGTTTATGTCTAAACTCTGAGTCATTATCCTGCAATTTTGTTGTTGTAATGGAAGTTCTTTCTCAGATTTTTAAAATGAGCTTGTGGGATTATGGACCTAACGTGATGGATTCCCTGATTGAACTAATAATATCCCTGGTATGAGCATTTATGATAATAGTTTTCACACTCTTTCTCTAGGCTCACCTAATAGTTCCAAGATCTTTTGACTTTTCTTTTCAATGTTTCAGGCTGTTTCAAATGGAAAATATGTGAATTCATGCTTGGATATGCTTGTAAATAACTTCATGCCGCCCAATTCCTACATGGATTTCCTGAAGAAACCACATGGTCTTACAAAAAAGGATGAAGTTCTTTCTCGAGTACACACAGCTCTAAAAGATATATCAGACCTGGTGCCTCTTGCACCCTTGAGATTGGAGCAGATAGTTGTCCATAAAATGCAAAGAGTCTTTTTCAAAGAATCTGTGAGTTGAACTTTCATGGACTAAAAGTTGCTTTAGAGAAATCTAAGTGAAAGTTGTGTTTATTATTCACTGAAGATTATATATATTTTATCTTTGTAATGTTTTCCCAAAAAAGTATTGCTTATTTTGGTATTTTTTAAAATTATTTTTCTACCATTGTTTTCTTTTTTACGATCATCAATCCAATGACTATTGGAAGTTTGTTGTGAAGCTGAAAGCTCATTATCAGTTTGTATGCTTTGGCTTTGGCAAACTGAGGTATTAGATGACAAGGTTTATATCGTTACGAATTTAGAATACCCTACCAAATATAGTTCAAATTAGAACAATGCCTGGTAATGATTTATAGTTGAAATGCAGTGTAAATTTACTAGATGCTGCATTGGGTACAATCTCTGAATGTACGAACCCCTCTTAAATTTTTTGAATAAATATGTTCATATGATTCAAATAAATAGGTCAGTTAAAGAGTCAGGTACAAAGAAGATGGTTACATTTTTAGAAGCCCTGACCGAAATTTTTTACAGATGCCTTTTGCTTGCTTTGAGGAGAGAAATTGCTTTGATATATTTTTAAAACAATCTTTTAAAAGCTCAATGCCTATTTCACCTTCAAAACATTTGCGCTCTTTGTTAGGATTTTTTAAAAATAAATTATATATGTTTATGCGATTGCTTTATCATTAATATCTGTTTAATTCCTCTGTAGTTGACCACGATATATGTGGAAAACATGTTGAGGTTGGAAAAGGGTGCATTGAGTGAATTTGTTGGGAGAAAGATCTTAACTGCGCTGGTGGATAAGCTTCTAGATTTGGATGTAAGGGAACACAAATATTTTACGGCACATTTGTTTATGCGATTGCTTTATCATTAATATTAACTAGTTCTAACCTTCTGGTAGGTGGAGATTGGGTGGGATGATATTCTACAAGACGATTTCAGTAAAGGAATTTTTGAGATGGAACTTGAAGATGATGATGAAACTACAGATGATATTAATGAGGATTCTAGTGAGGTATGATATTCAATACCTAGGCTGGATTTAGAAGATTATTTCACTAAGTTGTAATGATATTTAATCTCTTTCGTAGTTTTTCTTCGTTTTGTTTTGGAGAAGAATCTCGAGGCTTATGCCTTAAGGCTCATCTATAGGCAAGACTTTACTCTTCAACTTTTAGCCTCAAGATTTACCCATTCGTTGAGAAAAAAAAGGCTTACCCATTGGTAAAAAGGCATTAGGGTAATGACTATAAGAACAATATTGATTAGGGTCATTCTTTTAAAATACAGAGGTTTGAGTTGTTAATTTGGACTACTACTACTTTTAGTTTTGTGACTCTAAAAACACTGAAGACGATAAATTTTAGTATAAGCCAATCCTGTTAATGATGATAGTAGTGATGTTATAAATATCATTTTAAAATATCTTTTTGTTTAAGTGGCAGTTGACGGGTTGAACTTTTTATACTTCAATATAACTATTATAGTACTATGTTTAACAATACGTGGATGCCACTTTTAGATTTGTAAAATGTTTTTAATTAACTTTGAGGTTTACACCTTGCCTTGAAGCTGATTGTCTTTTGGGTCTACAAAGTTTATACTCAAGCTGAGTCAGGTTTTTAAAATAATATGCGATTTTTTTTTTTTGAAAAATTACTTACATTTTGACTTTTCTGCCATACGTCTTGATACTTCTTTTAATTCATGCTGTTATTTACTTGGCTAAAATTTAATTTTACTTTGCTAGCTTCCAAGAGAACTAAGCCGTAGAAGCTTAGGTGGAAATGTAATTGCTGAAACGTTAGATAGCTTGATTGTTCTAACATTTGAACATCTTGAATCATGTGAACGTGATGGACGATTGAATGAGGTACCTTCTGTAGATTATATAATTTTCCTTTGTTCTCAAATTCTTTGTTTTATTCTGCAAATGATAATCTTTCCATGTTTCTTTAATGTGGAGGTCAGGTTTTTGACATTTTACTCCTATCATTCCAAAGAACTGTTCTGACTGCTTACAAGTCTAAATTTGCTCAGGTAATTAACATGCCTTGCAATAATTCTCGATGTTTGCTTGGTTTAGTGGGCTCTCATTTTATATCAATTTTCTTGCTTATGAAGACTGAATGGCTTGCTTTTGATGCTTTTTTTGGCAGTTTGTCATTTTCTATGCTTGTTCATTAGATCCTGAAGTTTGTGGTGCGAGATTTGCTGTTTCGCTGGCTGATATGTTTGTTTCCTGCAATGATCCTCCGCTTATCAGGTATTAGCAATTCATTAGAAAGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTATTGGGTAAGAAACAAATTTTGTTGGTTAGTCTTGCCTTTGAAACCTATGTTTCACTAGTGTTTGTAAGCTTCATAAAAGATCTGAAGGTGGGACCAACATAGTTACGTTGCCTTTACTTTTTACAACACTTGCTTCACCCGTTCCTTATTCGTTTAGCAGCCATTTAAGTTGAATCTCCTTTGCAAGGTCTTACTCATCTAAGAAATCAACTACTAACAATTGTGGGGTTGAGTTGAGTCTTTCTCTCTCTAGTATTATTTTATTTTAGGGGTTTTAAGTTTTTTGTTTTCTTTTATCTATATAGGAATATACATAAAAGAATATAAAAGAAGTCCCTCTTTAAATGGAAGAATTTGCTCCTGCATGAGCCTATCAAATTTGTAGTATTGTAGACAAAATGTTCGTGACTTGAGAAGGGATGAAAGCAAGAAGTTACTAAGGAATTCTATAAAATTTGTGTGAATAGCTTAGTAGCCTTTTACATAAATATAATCTTACAACTTCACACTGTCTCACACACTAGTAGGCCCCCAGTCTGAACCTACGCTCAAACAAATATTTTCATTTTTTCTACAAAAATGAATTTGTTTTTAGTCTTTGGACTTGAGCTCAAACATGTTTTCCTCCTCCTCCTCCTACTTATTTATTATTATTATTTTTTTAATATAAAAATGAAATTAAATAATGTATGTTTGCAATGTTGTGCAGGATGAGTGCTGTTTCATATCTTGCTAGTTTCTTGTCTCGTGGGAAGTTTTTGACAACCTCTTTGGTTACTACTATATTGAAAAGGTTAACTTGTCAACTTTATTTTGATGAAATTAATATAGGTAGGGTGTGGCTCTAAGTCTAGTTTTGCTTCTTATTTCTTTCAGATTGGTGGATTGGTGTTTAGAATATGGCGAAACACTGAATGTTGACCCGAACCCAAAGGCTCATAAAGTATTTTATTCTGGTTGCCAGGTATACATTGCTTGAACTCCTTATTGTTAGACTAAGGCAGTGAGATTTGTTAAAAAACGGAAATATAATGATTAAATTGTTGTTATTGATTTGTTGAAAAACGGGAATATAGCCCTTCTACCTGCTGGTTGAAGGTCCTTACTTACATGCTCAGGCGAAAATCCTTCAGTCCAATGGAGGTTATGGTTTGAAAGAAACTTCAGAATCTTTCTTGAATCGTGATCAAGAAACTGACCTTGACTACTTGGTCTTCTACTTCTATGCGTCTCCCCCGTATATTCATGAAAAATCAAGGGGTCAATTGGCAAACCCTGAAATGGTTTTTTTGGTTACTTTATTTTATTTTTATTATTTTAAATTCTCCCTTGTTGAGCCCTAGAGAAATAAAACTGGACTTTGAAATATGGATTCAATTCTAGCACTTTGAATTGCATCTTGGAGAATGAACTTCACGAATGTGTTGGTTAATTAGAAAAAAATGGCATTCTTGCAGTTTTTTATTTATAAGATTTAGAACTTTGTCCTCCTTTTTTTTAATGATTTCTTTTCCACAGGCCATAATGTATGTGCTTTGCTTCCGGATGAGGTCCATTTTGGAAATTCCACGTCTGAAGTCCCAACTTCTGCTTATGCCCATTGGTCCTCTCTTGACGCATAGATTAAGCCCACTGAAGGTGGGTAATTGGTTGATCCCTTTATCTTTGGTGGTTTTTTTTTTGTTATAAATTGTTCGGCTAGTTATTTCTTGTCCTTGAAATCAACGTTTATGATCTGAAAACCCAGTAACCATATGGTACCTGAAAACCGAGTAACCATAGGTACTTGAGGTCCATTGGTTTGTTTATTTAATCAATTTTTTCATATAGCCTCTATTCCTCCCTCTTGAGAAATTGGAGATATCTTTTGCAACTCCAATGGTTCAGGCGATATGCCCCTCTTTTGCAAATTTCATACATCAATAGAACTTGTAAATAAAAAACGTTAATCTCCCTCATGGACATCTATCCATGCATTAAGTTGGAAATGTTTATAAGTTAACATTTTGGCTTTGGAGCTTGACGTCTTGTTTTGTAATTTTGCAACTCCTCTCCGGTGCTTCATAATATTGAATCCACAAATCTGGGATTTCTGCTATAGTTTTGATGTTGTGTCATTAACCTCAAATGATTTAATTATGATGGTCTGAAGCGCTGTTCTTTGCAATTTTCTTATATGAAATTTATTTTGACGTCTTCTTGTTTAACAGGTTTGCCTACCATCTATTGTTGAGGAATTTCTTCAGCAGGCAAAAGTTGCTAATTTATTTACACCGTCGGAGACTTTTATATTCAATGGTTTGCTGGAGTCTGAATATTCAAGAAGTTTTGGTGGATTAGAAAGGCTCGACATGTTTTTTCCATTTGACCCTTGCTTATTAAAAAATGTGACAGGTATATACTCTTATTGTTAATCTTCTTTGTTTCCTTTTCAAGACAACAAAGGATAGATGGGATCATAAAACCATTATAAAATATGAACAGACGTAGAAGAATTTATAAAATGATTCTGCCTGCTCATTGTGGCTATGCTTTATATTCAAAATGATTGATTACTAAGAGTGAGTACGCTTGAGAACTTGAAGGTGTACGGATGTTTTGTTTGATTTTTCTTTTGAATTATAACTCATGCTTTGTTGTTCCTCCTTGTTTATGAAGATATCTTCGGCCACATTTTGTATACTGGTCGATGGTCAGACCTACCTATGCCGAAGAAGAAGAACAAGAGGAAGATGGAGGTAGCAGCGATGAGGATGCAGAGGTTTTTCCAGATATAATTGAGGAAAACCTTATGGATGATGTAGCAATGGCAAGAAGCTACGACGACCAAGATTTTGATCTTGATTCTGGATTAAACAATATGTCCATCACACCAAGAAATTCGCTTCAGTACCGGCACGATTTTGTTAAGATGCCCTCAAGAATTCGACCCTCGATGAGTCCAGAATCTTTGTGATAACATATCTCAGCTTGAATAGTTAACTGGAATGCAAATGAGAATGGCGCTGCGCATTCATATTTCACAAAATGGTGATTGCAAATCTAGTTTTGGTTTTGGGGTTGTCTTCTTTACTTCAAATGTATGATAATTAGGTGGGTTAGAATCGTTGTTGGGGGTTCAGTTTTGAATTATTCCTTTTCTAGCTTTGCAGCGCTTTGATTATTGCCCTTGTTTACACTCCAGGATTGTAATAGTTTTACCAAGTGATGAAATACTGCCAAAATTTTGTACACTTCTGAGTGATACATGTATAAGCAAAAATTTTCATTATAATTCAAACCGATCCAATTACAGACTTTATT

mRNA sequence

GCGTATCTTCTCAATCTCTTCCTCAGCGCCGTTGGTCTCCTCTGCTCAGGTTATCACTTCTAAACCGTCCGTCTTCCTCTTCTCAATCTCTTCATCTTCTCACTTCTCAGTCGTCTGACTCATCTCCCTCTTGTTTGAATTTCATCCTGTTCCCAGCCCCCACTGTGACGATAGGATTTCAATAGGGGCCGGGCATTAATCATGGGGGCGGAACTGGAAAATAATCAGGCTCAGTTGCACGATATGGAGGATGTTAATCTCACAGATGCCCAGTTAGTTGATTTCATTAGGGGTTTTCTTAGTTCAGTGTCACTGGGAGATACTGATGGGTATAACCAGCTTGTTGGTGTTATACACCACAGAGATCGACTATCTCCCGACGAGGTTGCCTTGCTCGTGACATGTTTGAAGGCACTATCTGGAGCAGTTTCTTGTATAGATATCATTCAACACGAATCTCTGCTTGCAGCAATTTTTAAAATGAGCTTGTGGGATTATGGACCTAACGTGATGGATTCCCTGATTGAACTAATAATATCCCTGGCTGTTTCAAATGGAAAATATGTGAATTCATGCTTGGATATGCTTGTAAATAACTTCATGCCGCCCAATTCCTACATGGATTTCCTGAAGAAACCACATGGTCTTACAAAAAAGGATGAAGTTCTTTCTCGAGTACACACAGCTCTAAAAGATATATCAGACCTGGTGCCTCTTGCACCCTTGAGATTGGAGCAGATAGTTGTCCATAAAATGCAAAGAGTCTTTTTCAAAGAATCTTTGACCACGATATATGTGGAAAACATGTTGAGGTTGGAAAAGGGTGCATTGAGTGAATTTGTTGGGAGAAAGATCTTAACTGCGCTGGTGGATAAGCTTCTAGATTTGGATGTGGAGATTGGGTGGGATGATATTCTACAAGACGATTTCAGTAAAGGAATTTTTGAGATGGAACTTGAAGATGATGATGAAACTACAGATGATATTAATGAGGATTCTAGTGAGCTTCCAAGAGAACTAAGCCGTAGAAGCTTAGGTGGAAATGTAATTGCTGAAACGTTAGATAGCTTGATTGTTCTAACATTTGAACATCTTGAATCATGTGAACGTGATGGACGATTGAATGAGGTTTTTGACATTTTACTCCTATCATTCCAAAGAACTGTTCTGACTGCTTACAAGTCTAAATTTGCTCAGTTTGTCATTTTCTATGCTTGTTCATTAGATCCTGAAGTTTGTGGTGCGAGATTTGCTGTTTCGCTGGCTGATATGTTTGTTTCCTGCAATGATCCTCCGCTTATCAGGATGAGTGCTGTTTCATATCTTGCTAGTTTCTTGTCTCGTGGGAAGTTTTTGACAACCTCTTTGGTTACTACTATATTGAAAAGATTGGTGGATTGGTGTTTAGAATATGGCGAAACACTGAATGTTGACCCGAACCCAAAGGCTCATAAAGTATTTTATTCTGGTTGCCAGGCCATAATGTATGTGCTTTGCTTCCGGATGAGGTCCATTTTGGAAATTCCACGTCTGAAGTCCCAACTTCTGCTTATGCCCATTGGTCCTCTCTTGACGCATAGATTAAGCCCACTGAAGGTTTGCCTACCATCTATTGTTGAGGAATTTCTTCAGCAGGCAAAAGTTGCTAATTTATTTACACCGTCGGAGACTTTTATATTCAATGGTTTGCTGGAGTCTGAATATTCAAGAAGTTTTGGTGGATTAGAAAGGCTCGACATGTTTTTTCCATTTGACCCTTGCTTATTAAAAAATGTGACAGATATCTTCGGCCACATTTTGTATACTGGTCGATGGTCAGACCTACCTATGCCGAAGAAGAAGAACAAGAGGAAGATGGAGGTAGCAGCGATGAGGATGCAGAGGTTTTTCCAGATATAATTGAGGAAAACCTTATGGATGATGTAGCAATGGCAAGAAGCTACGACGACCAAGATTTTGATCTTGATTCTGGATTAAACAATATGTCCATCACACCAAGAAATTCGCTTCAGTACCGGCACGATTTTGTTAAGATGCCCTCAAGAATTCGACCCTCGATGAGTCCAGAATCTTTGTGATAACATATCTCAGCTTGAATAGTTAACTGGAATGCAAATGAGAATGGCGCTGCGCATTCATATTTCACAAAATGGTGATTGCAAATCTAGTTTTGGTTTTGGGGTTGTCTTCTTTACTTCAAATGTATGATAATTAGGTGGGTTAGAATCGTTGTTGGGGGTTCAGTTTTGAATTATTCCTTTTCTAGCTTTGCAGCGCTTTGATTATTGCCCTTGTTTACACTCCAGGATTGTAATAGTTTTACCAAGTGATGAAATACTGCCAAAATTTTGTACACTTCTGAGTGATACATGTATAAGCAAAAATTTTCATTATAATTCAAACCGATCCAATTACAGACTTTATT

Coding sequence (CDS)

ATGGGGGCGGAACTGGAAAATAATCAGGCTCAGTTGCACGATATGGAGGATGTTAATCTCACAGATGCCCAGTTAGTTGATTTCATTAGGGGTTTTCTTAGTTCAGTGTCACTGGGAGATACTGATGGGTATAACCAGCTTGTTGGTGTTATACACCACAGAGATCGACTATCTCCCGACGAGGTTGCCTTGCTCGTGACATGTTTGAAGGCACTATCTGGAGCAGTTTCTTGTATAGATATCATTCAACACGAATCTCTGCTTGCAGCAATTTTTAAAATGAGCTTGTGGGATTATGGACCTAACGTGATGGATTCCCTGATTGAACTAATAATATCCCTGGCTGTTTCAAATGGAAAATATGTGAATTCATGCTTGGATATGCTTGTAAATAACTTCATGCCGCCCAATTCCTACATGGATTTCCTGAAGAAACCACATGGTCTTACAAAAAAGGATGAAGTTCTTTCTCGAGTACACACAGCTCTAAAAGATATATCAGACCTGGTGCCTCTTGCACCCTTGAGATTGGAGCAGATAGTTGTCCATAAAATGCAAAGAGTCTTTTTCAAAGAATCTTTGACCACGATATATGTGGAAAACATGTTGAGGTTGGAAAAGGGTGCATTGAGTGAATTTGTTGGGAGAAAGATCTTAACTGCGCTGGTGGATAAGCTTCTAGATTTGGATGTGGAGATTGGGTGGGATGATATTCTACAAGACGATTTCAGTAAAGGAATTTTTGAGATGGAACTTGAAGATGATGATGAAACTACAGATGATATTAATGAGGATTCTAGTGAGCTTCCAAGAGAACTAAGCCGTAGAAGCTTAGGTGGAAATGTAATTGCTGAAACGTTAGATAGCTTGATTGTTCTAACATTTGAACATCTTGAATCATGTGAACGTGATGGACGATTGAATGAGGTTTTTGACATTTTACTCCTATCATTCCAAAGAACTGTTCTGACTGCTTACAAGTCTAAATTTGCTCAGTTTGTCATTTTCTATGCTTGTTCATTAGATCCTGAAGTTTGTGGTGCGAGATTTGCTGTTTCGCTGGCTGATATGTTTGTTTCCTGCAATGATCCTCCGCTTATCAGGATGAGTGCTGTTTCATATCTTGCTAGTTTCTTGTCTCGTGGGAAGTTTTTGACAACCTCTTTGGTTACTACTATATTGAAAAGATTGGTGGATTGGTGTTTAGAATATGGCGAAACACTGAATGTTGACCCGAACCCAAAGGCTCATAAAGTATTTTATTCTGGTTGCCAGGCCATAATGTATGTGCTTTGCTTCCGGATGAGGTCCATTTTGGAAATTCCACGTCTGAAGTCCCAACTTCTGCTTATGCCCATTGGTCCTCTCTTGACGCATAGATTAAGCCCACTGAAGGTTTGCCTACCATCTATTGTTGAGGAATTTCTTCAGCAGGCAAAAGTTGCTAATTTATTTACACCGTCGGAGACTTTTATATTCAATGGTTTGCTGGAGTCTGAATATTCAAGAAGTTTTGGTGGATTAGAAAGGCTCGACATGTTTTTTCCATTTGACCCTTGCTTATTAAAAAATGTGACAGATATCTTCGGCCACATTTTGTATACTGGTCGATGGTCAGACCTACCTATGCCGAAGAAGAAGAACAAGAGGAAGATGGAGGTAGCAGCGATGAGGATGCAGAGGTTTTTCCAGATATAA

Protein sequence

MGAELENNQAQLHDMEDVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHHRDRLSPDEVALLVTCLKALSGAVSCIDIIQHESLLAAIFKMSLWDYGPNVMDSLIELIISLAVSNGKYVNSCLDMLVNNFMPPNSYMDFLKKPHGLTKKDEVLSRVHTALKDISDLVPLAPLRLEQIVVHKMQRVFFKESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMELEDDDETTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLESCERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFYACSLDPEVCGARFAVSLADMFVSCNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKVFYSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAKVANLFTPSETFIFNGLLESEYSRSFGGLERLDMFFPFDPCLLKNVTDIFGHILYTGRWSDLPMPKKKNKRKMEVAAMRMQRFFQI

Homology

[Close]

BLAST of IVF0002165 vs. ExPASy Swiss-Prot
Match: B2RS91 (RNA polymerase I-specific transcription initiation factor RRN3 OS=Mus musculus OX=10090 GN=Rrn3 PE=1 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 2.4e-35
Identity = 144/519 (27.75%), Postives = 228/519 (43.93%), Query Frame = 0


Query: 85  ESLLAAIFKMSLWDYGPNVMDSLIELIISLAVSNGKYVNSCLDMLVNNFMPPNSYMDFLK 144
           E L+  I ++   +    V++  +  + +L  +   ++  CL M+ ++F+PP      + 
Sbjct: 105 EQLINIILRLPWLNRSQRVVEEYLAFLGNLVSAQTVFLRPCLSMIASHFVPPR----VIV 164

Query: 145 KPHGLTKKDE---------VLSRVHTALKDISDLVPLAPLRLEQIVVHKMQRVFFKESLT 204
           K  G+   D          +    H AL+ I+  VP  P  L  I+V K   V   E   
Sbjct: 165 KEGGIDVSDSDDEDDNLPAIFDTCHRALQIITRYVPSTPWFLMPILVEKFPFVRKSERTL 224

Query: 205 TIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQ-----------DDFS 264
             YV N+LR+        + R+IL  +++KLL LDV +   DI              D +
Sbjct: 225 ECYVHNLLRI--SLYFPTLRREILELVIEKLLKLDVSVSRQDIEDAEEKAAQTCGGTDTT 284

Query: 265 KGIFEMELEDDDETTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES-CER 324
           +G+F M   D+DE TD   +   E P +++  +      AE LD L+ L   ++E  C  
Sbjct: 285 EGLFNM---DEDEDTDPEKKADQEQPNQMAHPT------AERLDVLLCLLLSYIEDVCRV 344

Query: 325 DGRLN-----EVFDILLLSFQRTVLTAYKSKFAQFVIFYACSLDPEVCGARFAVSLADMF 384
            G+++     +++  L+  F + +L  + S   QF +F+ CS       A F   L    
Sbjct: 345 HGKIDNNKTKDLYRDLISIFDKLLLPTHASCHVQFFMFFLCSFKLGFAEA-FLEHLWKKL 404

Query: 385 VSCNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGETLNVDPNPKA-- 444
              N+P +IR +A +Y+ SFL+R KF+    V T L  LV+W   Y    N D   KA  
Sbjct: 405 QDPNNPAIIRQAAANYIGSFLARAKFIPLITVKTCLDLLVNWLHMY--LTNQDSGTKAFC 464

Query: 445 ----HKVFYSGCQAIMYVLCFRMRSIL--EIPRLKSQLLLMPIGPLLTHRLSPLKVCLPS 504
               H  FYS CQA+ Y + FR + +L   + +    L  +    ++  +L+PLK+CLP 
Sbjct: 465 DVALHGPFYSACQAVFYTVVFRHKQLLSGNLKQGLQYLQSLNFERIVLSQLNPLKICLPQ 524

Query: 505 IVEEFLQQAKVANLFTPSETFIFNGLLESEYSRSF--------GG------LERLDMFFP 553
           +V  F   A + N +      +F   +    SR          GG         LD FFP
Sbjct: 525 VVNFF---AAITNKY----QLVFCYTIMERNSRQMLPVIRSTAGGDSVQTCTNPLDTFFP 584

[Close]

BLAST of IVF0002165 vs. ExPASy Swiss-Prot
Match: Q5R4N9 (RNA polymerase I-specific transcription initiation factor RRN3 OS=Pongo abelii OX=9601 GN=RRN3 PE=2 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 1.4e-30
Identity = 138/505 (27.33%), Postives = 216/505 (42.77%), Query Frame = 0


Query: 85  ESLLAAIFKMSLWDYGPNVMDSLIELIISLAVSNGKYVNSCLDMLVNNFMPP-----NSY 144
           E L++ I ++  W     V++  +  + +L  +   ++  CL M+ ++F+PP        
Sbjct: 107 EQLISIILRLP-WLKSQTVVEEYLAFLANLVSAQTVFLRPCLGMIASHFVPPRVIIKEGD 166

Query: 145 MDFLKKPHGLTKKDEVLSRVHTALKDISDLVPLAPLRLEQIVVHKMQRVFFKESLTTIYV 204
           +D                  H AL+ I+  VP  P  L  I+V K   V   E     YV
Sbjct: 167 VDVSDSDDEDDNLPANFDTCHRALQIIARYVPSTPWFLMPILVEKFPFVRKSERTLECYV 226

Query: 205 ENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQ-----------DDFSKGIF 264
            N+LR+        +  +IL  +++KLL LDV     DI              D ++G+F
Sbjct: 227 HNLLRI--SVYFPTLRHEILELIIEKLLKLDVNASRQDIEDAEETATQTCGGTDSTEGLF 286

Query: 265 EMELEDDDETTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES-CERDGRL 324
            M   D+DE T+    ++   P  L +     + +AE LD L+ L   +++  C  DG++
Sbjct: 287 NM---DEDEETE---HETKAGPERLDQMV---HPVAECLDILMSLVLSYMKDVCYVDGQV 346

Query: 325 N-----EVFDILLLSFQRTVLTAYKSKFAQFVIFYACSLDPEVCGARFAVSLADMFVSCN 384
           +     +++  L+  F + +L+ + S   QF +FY CS       A F   L       +
Sbjct: 347 DNGKTKDLYRDLINIFDKLLLSTHASCHVQFFMFYLCSFKLGFAEA-FLEHLWKKLQDPS 406

Query: 385 DPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGETLNVDPNPKA------ 444
           +P +IR +A +Y+ SFL+R KF+    V + L  LV+W   Y    N D   KA      
Sbjct: 407 NPAIIRQAAGNYIGSFLARAKFIPLITVRSCLDLLVNWLHIY--LNNQDSGTKAFCDVAL 466

Query: 445 HKVFYSGCQAIMYVLCFRMRSILEIPRLKSQLLLMP---IGPLLTHRLSPLKVCLPSIVE 504
           H  FYS CQA+ Y   FR + +L    LK  L  +       ++  +L+PLK+CLPS+V 
Sbjct: 467 HGPFYSACQAVFYTFVFRHKQLLS-GNLKEGLRYLQSLNFEWIVMSQLNPLKICLPSVVN 526

Query: 505 EFLQQAKVANLFTPSETFIFNGLLESEYSRSFGG-------LERLDMFFPFDPCLLKNVT 552
            F        L         N        RS  G          LD FFPFDPC+LK   
Sbjct: 527 FFAAITNKYQLVFCYTIIERNNRQMLPVIRSTAGGDSVQTCTNPLDTFFPFDPCVLKRSK 586

[Close]

BLAST of IVF0002165 vs. ExPASy Swiss-Prot
Match: Q9NYV6 (RNA polymerase I-specific transcription initiation factor RRN3 OS=Homo sapiens OX=9606 GN=RRN3 PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 6.7e-30
Identity = 135/504 (26.79%), Postives = 216/504 (42.86%), Query Frame = 0


Query: 85  ESLLAAIFKMSLWDYGPNVMDSLIELIISLAVSNGKYVNSCLDMLVNNFMPP-----NSY 144
           E L++ I ++   +    V++  +  + +L  +   ++  CL M+ ++F+PP        
Sbjct: 107 EQLISIILRLPWLNRSQTVVEEYLAFLGNLVSAQTVFLRPCLSMIASHFVPPRVIIKEGD 166

Query: 145 MDFLKKPHGLTKKDEVLSRVHTALKDISDLVPLAPLRLEQIVVHKMQRVFFKESLTTIYV 204
           +D                  H AL+ I+  VP  P  L  I+V K   V   E     YV
Sbjct: 167 VDVSDSDDEDDNLPANFDTCHRALQIIARYVPSTPWFLMPILVEKFPFVRKSERTLECYV 226

Query: 205 ENMLRLEKGALSEFVGRKILTALVDKLLDLDVEI---GWDDILQ--------DDFSKGIF 264
            N+LR+        +  +IL  +++KLL LDV     G +D  +         D ++G+F
Sbjct: 227 HNLLRI--SVYFPTLRHEILELIIEKLLKLDVNASRQGIEDAEETATQTCGGTDSTEGLF 286

Query: 265 EMELEDDDETTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES-CERDGRL 324
            M   D+DE T+    ++   P  L +     + +AE LD L+ L   +++  C  DG++
Sbjct: 287 NM---DEDEETE---HETKAGPERLDQMV---HPVAERLDILMSLVLSYMKDVCYVDGKV 346

Query: 325 N-----EVFDILLLSFQRTVLTAYKSKFAQFVIFYACSLDPEVCGARFAVSLADMFVSCN 384
           +     +++  L+  F + +L  + S   QF +FY CS       A F   L       +
Sbjct: 347 DNGKTKDLYRDLINIFDKLLLPTHASCHVQFFMFYLCSFKLGFAEA-FLEHLWKKLQDPS 406

Query: 385 DPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGETLNVDPNPKA------ 444
           +P +IR +A +Y+ SFL+R KF+    V + L  LV+W   Y    N D   KA      
Sbjct: 407 NPAIIRQAAGNYIGSFLARAKFIPLITVKSCLDLLVNWLHIY--LNNQDSGTKAFCDVAL 466

Query: 445 HKVFYSGCQAIMYVLCFRMRSIL--EIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEE 504
           H  FYS CQA+ Y   FR + +L   +      L  +    ++  +L+PLK+CLPS+V  
Sbjct: 467 HGPFYSACQAVFYTFVFRHKQLLSGNLKEGLQYLQSLNFERIVMSQLNPLKICLPSVVNF 526

Query: 505 FLQQAKVANLFTPSETFIFNGLLESEYSRSFGG-------LERLDMFFPFDPCLLKNVTD 552
           F        L         N        RS  G          LD FFPFDPC+LK    
Sbjct: 527 FAAITNKYQLVFCYTIIERNNRQMLPVIRSTAGGDSVQICTNPLDTFFPFDPCVLKRSKK 586

[Close]

BLAST of IVF0002165 vs. ExPASy Swiss-Prot
Match: Q10110 (RNA polymerase I-specific transcription initiation factor rrn3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rrn3 PE=3 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 8.5e-25
Identity = 142/571 (24.87%), Postives = 241/571 (42.21%), Query Frame = 0


Query: 17  DVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHHR-DRLSPDEVALLVTCLKALSGA 76
           D  L    L  F+   L   + G+  GY  L      + D         L   L AL+  
Sbjct: 46  DGRLMQQMLRAFVNKALDDKAEGNFAGYEDLRRQFAAKSDTKDAPSSLQLQNLLSALTCN 105

Query: 77  VSCIDIIQHESLLAAIFKMSLWDYGPNVMDSLIELIISLAVSNGKYVNSCLDMLVNNFMP 136
           VS +D   + SL+ ++          + +      + +L  +   Y+   + ML+ +   
Sbjct: 106 VSRLD-SSNSSLVMSVLDSVWVSRDESFVRCYTRFLGNLISAQSNYLPLVMTMLIQH--- 165

Query: 137 PNSYMDFLKKPHGLTKKDEVLSRVHTALKDISDLVPLAPLRLEQIVVHKMQRVFFKESLT 196
                  L +P  L    E     H ALK + +LVP A   L   ++ +    +  ESL 
Sbjct: 166 ------MLYRPDSLAIHYE---HAHMALKYVLELVPRAHSFLYSSILEEFP--YKDESLL 225

Query: 197 T--IYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMELE 256
               Y+ N+L + +   S  +   +L A++DK++ +DVEI               ++E++
Sbjct: 226 AQMTYISNVLSICEYVPS--IKGPVLHAIIDKIIQIDVEI---------------QVEVD 285

Query: 257 DDDETTDDI--------NEDSS--------ELPRELSRRSLGGNVIA-----------ET 316
           DDDE  D++        N DS         E    +S       ++            + 
Sbjct: 286 DDDEEEDEVVTDDDGTSNADSEVITASTLYERHTAISSEMTSSTILTPPSLTDTRQLMQQ 345

Query: 317 LDSLIVLTFEHLE----SCERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFYACSLD 376
           LD L+   F +L+    S  RD  L  V++ L+ SF  TVL  ++ ++ QF+IF+A  LD
Sbjct: 346 LDQLLYTLFSYLDSNLKSTSRDRYL--VYNSLIKSFVNTVLKTFRCRYTQFLIFWASQLD 405

Query: 377 PEVCGARFAVSLADMFVSCNDPPLIRMSAVSYLASFLSRGKFL---TTSLVTTILKRLVD 436
           PE       V L ++ +  + P  +R+S   Y+ S+++R K L   T  ++  ++ R V+
Sbjct: 406 PEFTDIFLGV-LTEVCLDPSQPYTLRLSGAMYIGSYVARAKALEKNTIQIIVNMMTRWVE 465

Query: 437 WCLEYGETLNVDPNPKAHKVFYSGCQAIMYVLCFRMRSILEIPRLKSQLL--------LM 496
             L+  E    D     H VFY+  Q+I Y+ CFR R +      +S           L 
Sbjct: 466 AYLDQCENELSDDLLSKHSVFYAINQSIFYIFCFRWRELCVSDESESMEPRPNEWIPGLE 525

Query: 497 PIGPLLTHRLSPLKVCLPSIVEEFLQQAKVANLFTPSETFIFNGLLESEYSRSFGGLERL 543
            +   +  RL+PL+ C P+IV   LQ AKVAN    +  ++++ + ++       G + +
Sbjct: 526 ILHRSVLSRLNPLRYCSPNIV---LQFAKVANHL--NFMYVYSIIEQNRKGIFREGFDTM 574

[Close]

BLAST of IVF0002165 vs. ExPASy Swiss-Prot
Match: P36070 (RNA polymerase I-specific transcription initiation factor RRN3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RRN3 PE=1 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 5.2e-14
Identity = 129/586 (22.01%), Postives = 233/586 (39.76%), Query Frame = 0


Query: 11  QLHDMEDVNLTDAQLVDFIRGFLSSVSLGDTDGY----NQLVGVIHHRDRLSPDEVALLV 70
           Q  +++D   + A    F++  L  +   D+       NQ+     + +R++   + +L 
Sbjct: 38  QPEEIKDEVFSAAMYSRFVKSALDDLDKNDSTQIGIIANQVALPSKNPERINDKNLNIL- 97

Query: 71  TCLKALSGAVSCIDIIQHESLLAAIFKM-SLWDYGPNVMDSLIELIISLAVSNGKYVNSC 130
             L  LS  ++ I+  +   L+ +I      W+  P+ +   I  I  L  S  K+    
Sbjct: 98  --LDILSSNINRIESSRGTFLIQSIINFEKWWELPPHTLSKYIYFIKILCSSIPKWWQDV 157

Query: 131 LDMLVNNFMPPNSYMDFLKKPHGLTKKDEVLSRVHTALKDISDLVPLAPLRLEQIVVHKM 190
             +LV+ F+ P               K  V    H  LK    ++P +   ++  +    
Sbjct: 158 SMILVSCFILP--------------IKQTVCH--HDMLKYFLRMIPSSMGFIDTYLAKFF 217

Query: 191 QRVFFKESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWD-DILQDDF- 250
                       Y  N+L+L +G  SE +G +I + L++K++ +DVE+  + D L DD  
Sbjct: 218 PNKNDTRRKLVNYTSNLLKL-RGYCSE-LGFQIWSLLIEKIISIDVELQNELDELDDDVD 277

Query: 251 SKGIFEMELEDDDETTDDINEDSSE----LPRELSRRSLGGN------------------ 310
              + E++LEDDD+  DD  +D  E       EL   +  G+                  
Sbjct: 278 DDDLEEVDLEDDDDLDDDSGDDDDENCGNSNEELRSGAADGSQSDSEDMDIIEGMDGTEE 337

Query: 311 ----------VIAETLDSLIVLTFEHLESCERDGRLNE-----VFDILLLSFQRTVLTAY 370
                      ++  LDS++ L   H+E       L       VF+ L   F+  VL  Y
Sbjct: 338 YNVELTQGIKELSTKLDSILTLVSTHVEEQVTPESLESGEGVGVFNTLTTLFKTHVLPTY 397

Query: 371 KSKFAQFVIFYACSLDPEVCGARFAVSLADMFVSCNDPPLIRMSAVSYLASFLSRGKFLT 430
            ++  Q+++F+      E+  + F V+L D+  + N+    ++ ++ YL S+++R K L+
Sbjct: 398 YTRSIQYIMFHVSQQQLELMDS-FLVTLIDISFAVNEAAEKKIKSLQYLGSYIARAKKLS 457

Query: 431 TSLVTTILKRLVDW----CLEYGETLNVDPNPKAHKVFYSGCQAIMYVLCFRMRSILEIP 490
            + +  +   L  W     +E  E ++     +  K FY+  QA+ Y+ CFR     +  
Sbjct: 458 RTQIIFVASYLTSWLNRYVIEREEEVDQRGGMERFKHFYAAFQALCYIFCFRHNIFRDTD 517

Query: 491 RLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEF---LQQAKVANLFTPSET--------- 525
                 L      ++  + +PLK C  +++  F    QQ  VA  F+  E          
Sbjct: 518 GNWECELDKFFQRMVISKFNPLKFCNENVMLMFARIAQQESVAYCFSIIENNNNERLRGI 577

[Close]

BLAST of IVF0002165 vs. ExPASy TrEMBL
Match: A0A1S3AV30 (RNA polymerase I-specific transcription initiation factor RRN3 OS=Cucumis melo OX=3656 GN=LOC103483270 PE=3 SV=1)

HSP 1 Score: 1024.6 bits (2648), Expect = 1.5e-295
Identity = 523/523 (100.00%), Postives = 523/523 (100.00%), Query Frame = 0


Query: 1   MGAELENNQAQLHDMEDVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHHRDRLSPD 60
           MGAELENNQAQLHDMEDVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHHRDRLSPD
Sbjct: 1   MGAELENNQAQLHDMEDVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHHRDRLSPD 60

Query: 61  EVALLVTCLKALSGAVSCIDIIQHESLLAAIFKMSLWDYGPNVMDSLIELIISLAVSNGK 120
           EVALLVTCLKALSGAVSCIDIIQHESLLAAIFKMSLWDYGPNVMDSLIELIISLAVSNGK
Sbjct: 61  EVALLVTCLKALSGAVSCIDIIQHESLLAAIFKMSLWDYGPNVMDSLIELIISLAVSNGK 120

Query: 121 YVNSCLDMLVNNFMPPNSYMDFLKKPHGLTKKDEVLSRVHTALKDISDLVPLAPLRLEQI 180
           YVNSCLDMLVNNFMPPNSYMDFLKKPHGLTKKDEVLSRVHTALKDISDLVPLAPLRLEQI
Sbjct: 121 YVNSCLDMLVNNFMPPNSYMDFLKKPHGLTKKDEVLSRVHTALKDISDLVPLAPLRLEQI 180

Query: 181 VVHKMQRVFFKESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240
           VVHKMQRVFFKESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQ
Sbjct: 181 VVHKMQRVFFKESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240

Query: 241 DDFSKGIFEMELEDDDETTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES 300
           DDFSKGIFEMELEDDDETTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES
Sbjct: 241 DDFSKGIFEMELEDDDETTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES 300

Query: 301 CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFYACSLDPEVCGARFAVSLADMFVS 360
           CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFYACSLDPEVCGARFAVSLADMFVS
Sbjct: 301 CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFYACSLDPEVCGARFAVSLADMFVS 360

Query: 361 CNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKVF 420
           CNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKVF
Sbjct: 361 CNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKVF 420

Query: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAK 480
           YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAK
Sbjct: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAK 480

Query: 481 VANLFTPSETFIFNGLLESEYSRSFGGLERLDMFFPFDPCLLK 524
           VANLFTPSETFIFNGLLESEYSRSFGGLERLDMFFPFDPCLLK
Sbjct: 481 VANLFTPSETFIFNGLLESEYSRSFGGLERLDMFFPFDPCLLK 523

[Close]

BLAST of IVF0002165 vs. ExPASy TrEMBL
Match: A0A5D3D051 (RNA polymerase I-specific transcription initiation factor RRN3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004710 PE=3 SV=1)

HSP 1 Score: 1024.6 bits (2648), Expect = 1.5e-295
Identity = 523/523 (100.00%), Postives = 523/523 (100.00%), Query Frame = 0


Query: 1   MGAELENNQAQLHDMEDVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHHRDRLSPD 60
           MGAELENNQAQLHDMEDVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHHRDRLSPD
Sbjct: 1   MGAELENNQAQLHDMEDVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHHRDRLSPD 60

Query: 61  EVALLVTCLKALSGAVSCIDIIQHESLLAAIFKMSLWDYGPNVMDSLIELIISLAVSNGK 120
           EVALLVTCLKALSGAVSCIDIIQHESLLAAIFKMSLWDYGPNVMDSLIELIISLAVSNGK
Sbjct: 61  EVALLVTCLKALSGAVSCIDIIQHESLLAAIFKMSLWDYGPNVMDSLIELIISLAVSNGK 120

Query: 121 YVNSCLDMLVNNFMPPNSYMDFLKKPHGLTKKDEVLSRVHTALKDISDLVPLAPLRLEQI 180
           YVNSCLDMLVNNFMPPNSYMDFLKKPHGLTKKDEVLSRVHTALKDISDLVPLAPLRLEQI
Sbjct: 121 YVNSCLDMLVNNFMPPNSYMDFLKKPHGLTKKDEVLSRVHTALKDISDLVPLAPLRLEQI 180

Query: 181 VVHKMQRVFFKESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240
           VVHKMQRVFFKESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQ
Sbjct: 181 VVHKMQRVFFKESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240

Query: 241 DDFSKGIFEMELEDDDETTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES 300
           DDFSKGIFEMELEDDDETTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES
Sbjct: 241 DDFSKGIFEMELEDDDETTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES 300

Query: 301 CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFYACSLDPEVCGARFAVSLADMFVS 360
           CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFYACSLDPEVCGARFAVSLADMFVS
Sbjct: 301 CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFYACSLDPEVCGARFAVSLADMFVS 360

Query: 361 CNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKVF 420
           CNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKVF
Sbjct: 361 CNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKVF 420

Query: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAK 480
           YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAK
Sbjct: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAK 480

Query: 481 VANLFTPSETFIFNGLLESEYSRSFGGLERLDMFFPFDPCLLK 524
           VANLFTPSETFIFNGLLESEYSRSFGGLERLDMFFPFDPCLLK
Sbjct: 481 VANLFTPSETFIFNGLLESEYSRSFGGLERLDMFFPFDPCLLK 523

[Close]

BLAST of IVF0002165 vs. ExPASy TrEMBL
Match: A0A5A7U3Y2 (RNA polymerase I-specific transcription initiation factor RRN3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G001870 PE=3 SV=1)

HSP 1 Score: 1011.5 bits (2614), Expect = 1.4e-291
Identity = 523/546 (95.79%), Postives = 523/546 (95.79%), Query Frame = 0


Query: 1   MGAELENNQAQLHDMEDVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHHRDRLSPD 60
           MGAELENNQAQLHDMEDVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHHRDRLSPD
Sbjct: 1   MGAELENNQAQLHDMEDVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHHRDRLSPD 60

Query: 61  EVALLVTCLKALSGAVSCIDIIQHESLLAA-----------------------IFKMSLW 120
           EVALLVTCLKALSGAVSCIDIIQHESLLAA                       IFKMSLW
Sbjct: 61  EVALLVTCLKALSGAVSCIDIIQHESLLAAVSLCLNSESLSCNFVVVMEVLSQIFKMSLW 120

Query: 121 DYGPNVMDSLIELIISLAVSNGKYVNSCLDMLVNNFMPPNSYMDFLKKPHGLTKKDEVLS 180
           DYGPNVMDSLIELIISLAVSNGKYVNSCLDMLVNNFMPPNSYMDFLKKPHGLTKKDEVLS
Sbjct: 121 DYGPNVMDSLIELIISLAVSNGKYVNSCLDMLVNNFMPPNSYMDFLKKPHGLTKKDEVLS 180

Query: 181 RVHTALKDISDLVPLAPLRLEQIVVHKMQRVFFKESLTTIYVENMLRLEKGALSEFVGRK 240
           RVHTALKDISDLVPLAPLRLEQIVVHKMQRVFFKESLTTIYVENMLRLEKGALSEFVGRK
Sbjct: 181 RVHTALKDISDLVPLAPLRLEQIVVHKMQRVFFKESLTTIYVENMLRLEKGALSEFVGRK 240

Query: 241 ILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMELEDDDETTDDINEDSSELPRELSRRS 300
           ILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMELEDDDETTDDINEDSSELPRELSRRS
Sbjct: 241 ILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMELEDDDETTDDINEDSSELPRELSRRS 300

Query: 301 LGGNVIAETLDSLIVLTFEHLESCERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFY 360
           LGGNVIAETLDSLIVLTFEHLESCERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFY
Sbjct: 301 LGGNVIAETLDSLIVLTFEHLESCERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFY 360

Query: 361 ACSLDPEVCGARFAVSLADMFVSCNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRL 420
           ACSLDPEVCGARFAVSLADMFVSCNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRL
Sbjct: 361 ACSLDPEVCGARFAVSLADMFVSCNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRL 420

Query: 421 VDWCLEYGETLNVDPNPKAHKVFYSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLL 480
           VDWCLEYGETLNVDPNPKAHKVFYSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLL
Sbjct: 421 VDWCLEYGETLNVDPNPKAHKVFYSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLL 480

Query: 481 THRLSPLKVCLPSIVEEFLQQAKVANLFTPSETFIFNGLLESEYSRSFGGLERLDMFFPF 524
           THRLSPLKVCLPSIVEEFLQQAKVANLFTPSETFIFNGLLESEYSRSFGGLERLDMFFPF
Sbjct: 481 THRLSPLKVCLPSIVEEFLQQAKVANLFTPSETFIFNGLLESEYSRSFGGLERLDMFFPF 540

[Close]

BLAST of IVF0002165 vs. ExPASy TrEMBL
Match: A0A0A0L7G6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122360 PE=3 SV=1)

HSP 1 Score: 992.3 bits (2564), Expect = 8.5e-286
Identity = 504/523 (96.37%), Postives = 515/523 (98.47%), Query Frame = 0


Query: 1   MGAELENNQAQLHDMEDVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHHRDRLSPD 60
           MGAELENNQAQLH MEDVNLTDAQLVDFIRGFLSSVSLGD DGYNQLVGVIHHRDRLSPD
Sbjct: 1   MGAELENNQAQLHAMEDVNLTDAQLVDFIRGFLSSVSLGDIDGYNQLVGVIHHRDRLSPD 60

Query: 61  EVALLVTCLKALSGAVSCIDIIQHESLLAAIFKMSLWDYGPNVMDSLIELIISLAVSNGK 120
           EVALLVTCLKALSGAVSCIDII HESLLAAIFKMSLWDYG NVMD+LIELIISLAVSNGK
Sbjct: 61  EVALLVTCLKALSGAVSCIDIILHESLLAAIFKMSLWDYGSNVMDALIELIISLAVSNGK 120

Query: 121 YVNSCLDMLVNNFMPPNSYMDFLKKPHGLTKKDEVLSRVHTALKDISDLVPLAPLRLEQI 180
           YV+SCLDMLVNNFMPPNSYMD LKKPHGLT+K+EVLSRVHTALKDISDLVPLAPLRLEQ 
Sbjct: 121 YVDSCLDMLVNNFMPPNSYMDLLKKPHGLTRKEEVLSRVHTALKDISDLVPLAPLRLEQK 180

Query: 181 VVHKMQRVFFKESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240
           VVHKMQRVFF ESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQ
Sbjct: 181 VVHKMQRVFFNESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240

Query: 241 DDFSKGIFEMELEDDDETTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES 300
           DDFSKGIFEMELEDDD+TTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES
Sbjct: 241 DDFSKGIFEMELEDDDDTTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES 300

Query: 301 CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFYACSLDPEVCGARFAVSLADMFVS 360
           CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQF++FYACSLDPEVCGARFA+SLADMFVS
Sbjct: 301 CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFIVFYACSLDPEVCGARFAISLADMFVS 360

Query: 361 CNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKVF 420
           CNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYG+TLNVDPNPKAHKVF
Sbjct: 361 CNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGKTLNVDPNPKAHKVF 420

Query: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAK 480
           YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFL+QAK
Sbjct: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLRQAK 480

Query: 481 VANLFTPSETFIFNGLLESEYSRSFGGLERLDMFFPFDPCLLK 524
           VANLFTPSE FIFNGLLES+YSRSFGGLERLDMFFPFDPCLLK
Sbjct: 481 VANLFTPSENFIFNGLLESDYSRSFGGLERLDMFFPFDPCLLK 523

[Close]

BLAST of IVF0002165 vs. ExPASy TrEMBL
Match: A0A6J1F0A3 (RNA polymerase I-specific transcription initiation factor RRN3-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111438313 PE=3 SV=1)

HSP 1 Score: 932.9 bits (2410), Expect = 6.1e-268
Identity = 472/523 (90.25%), Postives = 503/523 (96.18%), Query Frame = 0


Query: 1   MGAELENNQAQLHDMEDVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHHRDRLSPD 60
           MG ELEN QAQ  DME VN TD QLVDFIRGFL+SVSLG+TDGY+QLVGVIHHR RLS D
Sbjct: 1   MGVELENGQAQFQDMEGVNFTDDQLVDFIRGFLTSVSLGNTDGYHQLVGVIHHRGRLSAD 60

Query: 61  EVALLVTCLKALSGAVSCIDIIQHESLLAAIFKMSLWDYGPNVMDSLIELIISLAVSNGK 120
           EVALLVTCLKALSGAVSCID++ HESLLAAIFKMSLWDYGPNVMD+LIELI SLAVS+GK
Sbjct: 61  EVALLVTCLKALSGAVSCIDVVLHESLLAAIFKMSLWDYGPNVMDALIELITSLAVSSGK 120

Query: 121 YVNSCLDMLVNNFMPPNSYMDFLKKPHGLTKKDEVLSRVHTALKDISDLVPLAPLRLEQI 180
           YV+SCLDMLV NFMPP+SY DFLKKPHGLT+KDEVLSRVHTALKDISDLVPLAPLRLE I
Sbjct: 121 YVDSCLDMLVTNFMPPHSYKDFLKKPHGLTRKDEVLSRVHTALKDISDLVPLAPLRLELI 180

Query: 181 VVHKMQRVFFKESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240
           VVHKMQRVFFKESLTTIYVENMLRLEKGA+SEFVGRKILTALVDKLLDLDVEIGWDDILQ
Sbjct: 181 VVHKMQRVFFKESLTTIYVENMLRLEKGAMSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240

Query: 241 DDFSKGIFEMELEDDDETTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES 300
           DDFSKGIFE+ELEDD+E+TDDI+EDSSELPRELSR+SLGGNVIAETLDSLIVLTFEHLES
Sbjct: 241 DDFSKGIFEIELEDDNESTDDIDEDSSELPRELSRKSLGGNVIAETLDSLIVLTFEHLES 300

Query: 301 CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFYACSLDPEVCGARFAVSLADMFVS 360
           CERDGRL+EVFDILLLSFQRTVLTAYKSKFAQFVIFYAC+LDPEVCGARFAV+LADMFVS
Sbjct: 301 CERDGRLSEVFDILLLSFQRTVLTAYKSKFAQFVIFYACALDPEVCGARFAVTLADMFVS 360

Query: 361 CNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKVF 420
           CN  PL RMSA+SYLAS+LSRGKFL+TSLVTTILKRLVDWCLEYG+T +VD NPKAHK+F
Sbjct: 361 CNGLPLTRMSAISYLASYLSRGKFLSTSLVTTILKRLVDWCLEYGKTHDVDLNPKAHKIF 420

Query: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAK 480
           YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIG +LTHRLSPLKVCLPSIVEEFL+QAK
Sbjct: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGRILTHRLSPLKVCLPSIVEEFLRQAK 480

Query: 481 VANLFTPSETFIFNGLLESEYSRSFGGLERLDMFFPFDPCLLK 524
           VANLFTPSETFIFNGLLESEYS++FGG+ERLDMFFP+DPCLLK
Sbjct: 481 VANLFTPSETFIFNGLLESEYSKTFGGIERLDMFFPYDPCLLK 523

[Close]

BLAST of IVF0002165 vs. NCBI nr
Match: XP_008438040.1 (PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3 [Cucumis melo] >XP_008438041.1 PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3 [Cucumis melo] >XP_008438044.1 PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3 [Cucumis melo] >TYK17601.1 RNA polymerase I-specific transcription initiation factor RRN3 [Cucumis melo var. makuwa])

HSP 1 Score: 1019 bits (2635), Expect = 0.0
Identity = 523/524 (99.81%), Postives = 523/524 (99.81%), Query Frame = 0


Query: 1   MGAELENNQAQLHDMEDVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHHRDRLSPD 60
           MGAELENNQAQLHDMEDVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHHRDRLSPD
Sbjct: 1   MGAELENNQAQLHDMEDVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHHRDRLSPD 60

Query: 61  EVALLVTCLKALSGAVSCIDIIQHESLLAAIFKMSLWDYGPNVMDSLIELIISLAVSNGK 120
           EVALLVTCLKALSGAVSCIDIIQHESLLAAIFKMSLWDYGPNVMDSLIELIISLAVSNGK
Sbjct: 61  EVALLVTCLKALSGAVSCIDIIQHESLLAAIFKMSLWDYGPNVMDSLIELIISLAVSNGK 120

Query: 121 YVNSCLDMLVNNFMPPNSYMDFLKKPHGLTKKDEVLSRVHTALKDISDLVPLAPLRLEQI 180
           YVNSCLDMLVNNFMPPNSYMDFLKKPHGLTKKDEVLSRVHTALKDISDLVPLAPLRLEQI
Sbjct: 121 YVNSCLDMLVNNFMPPNSYMDFLKKPHGLTKKDEVLSRVHTALKDISDLVPLAPLRLEQI 180

Query: 181 VVHKMQRVFFKESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240
           VVHKMQRVFFKESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQ
Sbjct: 181 VVHKMQRVFFKESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240

Query: 241 DDFSKGIFEMELEDDDETTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES 300
           DDFSKGIFEMELEDDDETTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES
Sbjct: 241 DDFSKGIFEMELEDDDETTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES 300

Query: 301 CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFYACSLDPEVCGARFAVSLADMFVS 360
           CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFYACSLDPEVCGARFAVSLADMFVS
Sbjct: 301 CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFYACSLDPEVCGARFAVSLADMFVS 360

Query: 361 CNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKVF 420
           CNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKVF
Sbjct: 361 CNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKVF 420

Query: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAK 480
           YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAK
Sbjct: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAK 480

Query: 481 VANLFTPSETFIFNGLLESEYSRSFGGLERLDMFFPFDPCLLKN 524
           VANLFTPSETFIFNGLLESEYSRSFGGLERLDMFFPFDPCLLK 
Sbjct: 481 VANLFTPSETFIFNGLLESEYSRSFGGLERLDMFFPFDPCLLKK 524

[Close]

BLAST of IVF0002165 vs. NCBI nr
Match: KAA0048966.1 (RNA polymerase I-specific transcription initiation factor RRN3 [Cucumis melo var. makuwa])

HSP 1 Score: 1006 bits (2601), Expect = 0.0
Identity = 523/547 (95.61%), Postives = 523/547 (95.61%), Query Frame = 0


Query: 1   MGAELENNQAQLHDMEDVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHHRDRLSPD 60
           MGAELENNQAQLHDMEDVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHHRDRLSPD
Sbjct: 1   MGAELENNQAQLHDMEDVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHHRDRLSPD 60

Query: 61  EVALLVTCLKALSGAVSCIDIIQHESLLAA-----------------------IFKMSLW 120
           EVALLVTCLKALSGAVSCIDIIQHESLLAA                       IFKMSLW
Sbjct: 61  EVALLVTCLKALSGAVSCIDIIQHESLLAAVSLCLNSESLSCNFVVVMEVLSQIFKMSLW 120

Query: 121 DYGPNVMDSLIELIISLAVSNGKYVNSCLDMLVNNFMPPNSYMDFLKKPHGLTKKDEVLS 180
           DYGPNVMDSLIELIISLAVSNGKYVNSCLDMLVNNFMPPNSYMDFLKKPHGLTKKDEVLS
Sbjct: 121 DYGPNVMDSLIELIISLAVSNGKYVNSCLDMLVNNFMPPNSYMDFLKKPHGLTKKDEVLS 180

Query: 181 RVHTALKDISDLVPLAPLRLEQIVVHKMQRVFFKESLTTIYVENMLRLEKGALSEFVGRK 240
           RVHTALKDISDLVPLAPLRLEQIVVHKMQRVFFKESLTTIYVENMLRLEKGALSEFVGRK
Sbjct: 181 RVHTALKDISDLVPLAPLRLEQIVVHKMQRVFFKESLTTIYVENMLRLEKGALSEFVGRK 240

Query: 241 ILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMELEDDDETTDDINEDSSELPRELSRRS 300
           ILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMELEDDDETTDDINEDSSELPRELSRRS
Sbjct: 241 ILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMELEDDDETTDDINEDSSELPRELSRRS 300

Query: 301 LGGNVIAETLDSLIVLTFEHLESCERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFY 360
           LGGNVIAETLDSLIVLTFEHLESCERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFY
Sbjct: 301 LGGNVIAETLDSLIVLTFEHLESCERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFY 360

Query: 361 ACSLDPEVCGARFAVSLADMFVSCNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRL 420
           ACSLDPEVCGARFAVSLADMFVSCNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRL
Sbjct: 361 ACSLDPEVCGARFAVSLADMFVSCNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRL 420

Query: 421 VDWCLEYGETLNVDPNPKAHKVFYSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLL 480
           VDWCLEYGETLNVDPNPKAHKVFYSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLL
Sbjct: 421 VDWCLEYGETLNVDPNPKAHKVFYSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLL 480

Query: 481 THRLSPLKVCLPSIVEEFLQQAKVANLFTPSETFIFNGLLESEYSRSFGGLERLDMFFPF 524
           THRLSPLKVCLPSIVEEFLQQAKVANLFTPSETFIFNGLLESEYSRSFGGLERLDMFFPF
Sbjct: 481 THRLSPLKVCLPSIVEEFLQQAKVANLFTPSETFIFNGLLESEYSRSFGGLERLDMFFPF 540

[Close]

BLAST of IVF0002165 vs. NCBI nr
Match: KAE8650250.1 (hypothetical protein Csa_010750 [Cucumis sativus])

HSP 1 Score: 988 bits (2553), Expect = 0.0
Identity = 505/533 (94.75%), Postives = 519/533 (97.37%), Query Frame = 0


Query: 1   MGAELENNQAQLHDMEDVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHHRDRLSPD 60
           MGAELENNQAQLH MEDVNLTDAQLVDFIRGFLSSVSLGD DGYNQLVGVIHHRDRLSPD
Sbjct: 1   MGAELENNQAQLHAMEDVNLTDAQLVDFIRGFLSSVSLGDIDGYNQLVGVIHHRDRLSPD 60

Query: 61  EVALLVTCLKALSGAVSCIDIIQHESLLAAIFKMSLWDYGPNVMDSLIELIISLAVSNGK 120
           EVALLVTCLKALSGAVSCIDII HESLLAAIFKMSLWDYG NVMD+LIELIISLAVSNGK
Sbjct: 61  EVALLVTCLKALSGAVSCIDIILHESLLAAIFKMSLWDYGSNVMDALIELIISLAVSNGK 120

Query: 121 YVNSCLDMLVNNFMPPNSYMDFLKKPHGLTKKDEVLSRVHTALKDISDLVPLAPLRLEQI 180
           YV+SCLDMLVNNFMPPNSYMD LKKPHGLT+K+EVLSRVHTALKDISDLVPLAPLRLEQ 
Sbjct: 121 YVDSCLDMLVNNFMPPNSYMDLLKKPHGLTRKEEVLSRVHTALKDISDLVPLAPLRLEQK 180

Query: 181 VVHKMQRVFFKESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240
           VVHKMQRVFF ESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQ
Sbjct: 181 VVHKMQRVFFNESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240

Query: 241 DDFSKGIFEMELEDDDETTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES 300
           DDFSKGIFEMELEDDD+TTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES
Sbjct: 241 DDFSKGIFEMELEDDDDTTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES 300

Query: 301 CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFYACSLDPEVCGARFAVSLADMFVS 360
           CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQF++FYACSLDPEVCGARFA+SLADMFVS
Sbjct: 301 CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFIVFYACSLDPEVCGARFAISLADMFVS 360

Query: 361 CNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKVF 420
           CNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYG+TLNVDPNPKAHKVF
Sbjct: 361 CNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGKTLNVDPNPKAHKVF 420

Query: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAK 480
           YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFL+QAK
Sbjct: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLRQAK 480

Query: 481 VANLFTPSETFIFNGLLESEYSRSFGGLERLDMFFPFDPCLLKNVTDIFGHIL 533
           VANLFTPSE FIFNGLLES+YSRSFGGLERLDMFFPFDPCLLK    I  +++
Sbjct: 481 VANLFTPSENFIFNGLLESDYSRSFGGLERLDMFFPFDPCLLKKCDRIDENLM 533

[Close]

BLAST of IVF0002165 vs. NCBI nr
Match: XP_004133864.1 (RNA polymerase I-specific transcription initiation factor RRN3 [Cucumis sativus] >XP_011650750.1 RNA polymerase I-specific transcription initiation factor RRN3 [Cucumis sativus])

HSP 1 Score: 987 bits (2551), Expect = 0.0
Identity = 504/524 (96.18%), Postives = 515/524 (98.28%), Query Frame = 0


Query: 1   MGAELENNQAQLHDMEDVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHHRDRLSPD 60
           MGAELENNQAQLH MEDVNLTDAQLVDFIRGFLSSVSLGD DGYNQLVGVIHHRDRLSPD
Sbjct: 1   MGAELENNQAQLHAMEDVNLTDAQLVDFIRGFLSSVSLGDIDGYNQLVGVIHHRDRLSPD 60

Query: 61  EVALLVTCLKALSGAVSCIDIIQHESLLAAIFKMSLWDYGPNVMDSLIELIISLAVSNGK 120
           EVALLVTCLKALSGAVSCIDII HESLLAAIFKMSLWDYG NVMD+LIELIISLAVSNGK
Sbjct: 61  EVALLVTCLKALSGAVSCIDIILHESLLAAIFKMSLWDYGSNVMDALIELIISLAVSNGK 120

Query: 121 YVNSCLDMLVNNFMPPNSYMDFLKKPHGLTKKDEVLSRVHTALKDISDLVPLAPLRLEQI 180
           YV+SCLDMLVNNFMPPNSYMD LKKPHGLT+K+EVLSRVHTALKDISDLVPLAPLRLEQ 
Sbjct: 121 YVDSCLDMLVNNFMPPNSYMDLLKKPHGLTRKEEVLSRVHTALKDISDLVPLAPLRLEQK 180

Query: 181 VVHKMQRVFFKESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240
           VVHKMQRVFF ESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQ
Sbjct: 181 VVHKMQRVFFNESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240

Query: 241 DDFSKGIFEMELEDDDETTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES 300
           DDFSKGIFEMELEDDD+TTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES
Sbjct: 241 DDFSKGIFEMELEDDDDTTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES 300

Query: 301 CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFYACSLDPEVCGARFAVSLADMFVS 360
           CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQF++FYACSLDPEVCGARFA+SLADMFVS
Sbjct: 301 CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFIVFYACSLDPEVCGARFAISLADMFVS 360

Query: 361 CNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKVF 420
           CNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYG+TLNVDPNPKAHKVF
Sbjct: 361 CNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGKTLNVDPNPKAHKVF 420

Query: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAK 480
           YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFL+QAK
Sbjct: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLRQAK 480

Query: 481 VANLFTPSETFIFNGLLESEYSRSFGGLERLDMFFPFDPCLLKN 524
           VANLFTPSE FIFNGLLES+YSRSFGGLERLDMFFPFDPCLLK 
Sbjct: 481 VANLFTPSENFIFNGLLESDYSRSFGGLERLDMFFPFDPCLLKK 524

[Close]

BLAST of IVF0002165 vs. NCBI nr
Match: XP_038896673.1 (RNA polymerase I-specific transcription initiation factor RRN3-like [Benincasa hispida])

HSP 1 Score: 963 bits (2489), Expect = 0.0
Identity = 487/524 (92.94%), Postives = 511/524 (97.52%), Query Frame = 0


Query: 1   MGAELENNQAQLHDMEDVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHHRDRLSPD 60
           MGAE EN QAQLHDMEDVNLTDAQLVDFIRGFLSSVSLGD DGYNQL+GVIHH+DRLSPD
Sbjct: 1   MGAEFENGQAQLHDMEDVNLTDAQLVDFIRGFLSSVSLGDNDGYNQLIGVIHHKDRLSPD 60

Query: 61  EVALLVTCLKALSGAVSCIDIIQHESLLAAIFKMSLWDYGPNVMDSLIELIISLAVSNGK 120
           E+ALLVTCLKALSGAVSCIDII HESLL+AIFKMSLWDYGPNVMD+LIELIISLAVS+G 
Sbjct: 61  EIALLVTCLKALSGAVSCIDIILHESLLSAIFKMSLWDYGPNVMDALIELIISLAVSSGN 120

Query: 121 YVNSCLDMLVNNFMPPNSYMDFLKKPHGLTKKDEVLSRVHTALKDISDLVPLAPLRLEQI 180
           YV+SCLDMLVNNFMPP SY DFLKKPHGLT+KDEVLSRVHTALKDISDLVPLAPLRLEQI
Sbjct: 121 YVDSCLDMLVNNFMPPYSYKDFLKKPHGLTRKDEVLSRVHTALKDISDLVPLAPLRLEQI 180

Query: 181 VVHKMQRVFFKESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240
           VVHKMQRVFFKESLTTIYVENMLRLEKGA+SEFVGRKILTALVDKLLDLDVEIGWDDILQ
Sbjct: 181 VVHKMQRVFFKESLTTIYVENMLRLEKGAMSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240

Query: 241 DDFSKGIFEMELEDDDETTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES 300
           DDFSKGIFEMELEDDDET DD NEDSSELPRELSR+SLGGNVIAETLDSLIVLTFEHLES
Sbjct: 241 DDFSKGIFEMELEDDDETADDSNEDSSELPRELSRKSLGGNVIAETLDSLIVLTFEHLES 300

Query: 301 CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFYACSLDPEVCGARFAVSLADMFVS 360
           CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFYAC+L PEVCG RFAVSLADMFVS
Sbjct: 301 CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFYACALYPEVCGERFAVSLADMFVS 360

Query: 361 CNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKVF 420
           CNDPPL RMSAVSYLAS+LSRGKFL+TSLVT+ILKRLVDWCLEYG+TL+V+PNPKAHKVF
Sbjct: 361 CNDPPLTRMSAVSYLASYLSRGKFLSTSLVTSILKRLVDWCLEYGKTLDVEPNPKAHKVF 420

Query: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAK 480
           YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGP+LTHRLSPLKVCLPSIVEEFL+QAK
Sbjct: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPVLTHRLSPLKVCLPSIVEEFLRQAK 480

Query: 481 VANLFTPSETFIFNGLLESEYSRSFGGLERLDMFFPFDPCLLKN 524
           VANLFTPSET++FNGLLES+YSR+FGG+ERLDMFFPFDPCLLK 
Sbjct: 481 VANLFTPSETYVFNGLLESDYSRTFGGIERLDMFFPFDPCLLKK 524

[Close]

BLAST of IVF0002165 vs. TAIR 10
Match: AT2G34750.1 (RNA polymerase I specific transcription initiation factor RRN3 protein )

HSP 1 Score: 536.6 bits (1381), Expect = 2.5e-152
Identity = 278/513 (54.19%), Postives = 378/513 (73.68%), Query Frame = 0


Query: 15  MEDVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHH--RDRLSPDEVALLVTCLKAL 74
           +++V+L+D QLV  +R  L+SV  GD+D Y+++VGV+    ++   PD VA L T LKAL
Sbjct: 20  VDNVDLSDTQLVQTVRKALTSVKTGDSDLYSEMVGVMARDIKEFKDPDVVAQLETVLKAL 79

Query: 75  SGAVSCIDIIQHESLLAAIFKMSLWDYGPNVMDSLIELIISLAVSNGKYVNSCLDMLVNN 134
           SGAV+CID++ H+ LL+A+F+M LWD+ P+VMD+L+ L+ISLAV++GKY++SCL+MLV+N
Sbjct: 80  SGAVACIDVLHHQKLLSALFRMKLWDHRPDVMDALVNLVISLAVTSGKYLDSCLNMLVSN 139

Query: 135 FMPPNSYMDFLKKPHGLTKKDEVLSRVHTALKDISDLVPLAPLRLEQIVVHKMQRVFFKE 194
           F+PP   ++ L     L KK +VLSRVH AL  IS LVPL P RL  ++  +M ++  K+
Sbjct: 140 FVPPPWVVNNLSHSRILNKKIDVLSRVHAALLKISILVPLTPSRLVPMLFQQMPKMHKKD 199

Query: 195 SLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMEL 254
               IYVE++L+LE  ++ +  G  IL  ++++L DLD+EI WDDI QDD S+G+F+MEL
Sbjct: 200 HSIVIYVESLLKLENSSIGQVGGSMILGMVMERLRDLDLEIEWDDIPQDDSSRGMFDMEL 259

Query: 255 EDDDETTDDINEDSSELP-RELSRRSLGGNVIAETLDSLIVLTFEHLESCERDGRLNEVF 314
           ED  E T     D  ELP   L + +  G+++++ LD L+V+ FEHLESC+ DGRL++VF
Sbjct: 260 EDAAEGT---MNDGDELPVGPLKQDTSDGSIVSKLLDKLMVVAFEHLESCQNDGRLDQVF 319

Query: 315 DILLLSFQRTVLTAYKSKFAQFVIFYACSLDPEVCGARFAVSLADMFVSCNDPPLIRMSA 374
           + L  SF+  +L  YKSKF QF+IFYACSLDPE CG +FA  L ++F+S N     RMSA
Sbjct: 320 ESLFKSFENFILNTYKSKFTQFLIFYACSLDPENCGVKFASKLVEIFLSSNKHVATRMSA 379

Query: 375 VSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKVFYSGCQAIMYVL 434
           V+YLASFL+RGKFL  S V ++LKRL+D C+ Y  T N D  P+AH++F+SGCQAIMYVL
Sbjct: 380 VAYLASFLARGKFLPVSFVASMLKRLIDECVGYCRTCNDDTRPEAHQIFFSGCQAIMYVL 439

Query: 435 CFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAKVANLFTPSETF 494
           CFRMRSIL++PR +SQ  L P+  +L H+L+PL VCLPS+V EFL+QAK   LF  S++F
Sbjct: 440 CFRMRSILDVPRFRSQ--LTPLESILMHKLNPLMVCLPSVVAEFLRQAKEGGLFIVSDSF 499

Query: 495 IFNGLLESEYSRSFGGLERLDMFFPFDPCLLKN 525
           IF+ LLESE SR+FGG ERLD FFPFDPCLLK+
Sbjct: 500 IFDDLLESELSRAFGGFERLDTFFPFDPCLLKS 527

[Close]

BLAST of IVF0002165 vs. TAIR 10
Match: AT1G30590.1 (RNA polymerase I specific transcription initiation factor RRN3 protein )

HSP 1 Score: 475.7 bits (1223), Expect = 5.1e-134
Identity = 265/511 (51.86%), Postives = 350/511 (68.49%), Query Frame = 0


Query: 15  MEDVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHHRDRLSPDEVALLVTCLKALSG 74
           M++   TD  LV  +R  L+SV  GDTD Y+QL  V+   +    D VA L T LK+LS 
Sbjct: 16  MDNAEYTDTDLVFAVRKALASVQNGDTDDYSQLKTVMCLTEDADFDAVAQLETVLKSLSV 75

Query: 75  AVSCIDIIQHESLLAAIFKMSLW--DYGPNVMDSLIELIISLAVSNGKYVNSCLDMLVNN 134
           +V+ ID++ H+ LL A   MSLW   + P+VMD+L++LIISLA ++GKY++ CL+MLV N
Sbjct: 76  SVAWIDLVHHKDLLEA---MSLWYHSHRPSVMDALVDLIISLAATSGKYLDPCLNMLVRN 135

Query: 135 FMPPNSYMDFLKKPHGLTKKDEVLSRVHTALKDISDLVPLAPLRLEQIVVHKMQRVFFKE 194
           F  P ++   + +   + K  EV  RVH AL  IS L+PLAP  L  I+   M+++  K+
Sbjct: 136 FSQP-TFKHKVSQTQLVKKMQEVHPRVHAALHKISYLIPLAPWNLVSILAQNMRKIDKKD 195

Query: 195 SLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMEL 254
                YV+N+LRLE  ++ E VG  IL  +++++LDLD+  G      DD + G+F+MEL
Sbjct: 196 PSIVTYVDNLLRLENSSIGEVVGSVILMMVMERMLDLDLVSGC-----DDSNGGMFDMEL 255

Query: 255 EDDDETTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLESCERDGRLNEVFD 314
           ED  E+T  +NE        L + + GGNV++E LD L+VL F HLESC+   RL+EVF+
Sbjct: 256 EDAVEST--MNEGDEFPVGALKQNTSGGNVVSELLDKLMVLFFHHLESCQNSDRLDEVFE 315

Query: 315 ILLLSFQRTVLTAYKSKFAQFVIFYACSLDPEVCGARFAVSLADMFVSCNDPPLIRMSAV 374
           IL  SF+  +L  YK+KF+QF++FYACSLDPE CG RFA  L D+++S N   L RMSAV
Sbjct: 316 ILFKSFENYILNTYKTKFSQFLMFYACSLDPENCGVRFASKLLDIYLSSNTCRLTRMSAV 375

Query: 375 SYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKVFYSGCQAIMYVLC 434
           +YLAS+LSRGKFL  S V ++LKRLVD C EY  T N D  P+AH+VFYSGCQAI+YVLC
Sbjct: 376 AYLASYLSRGKFLPASFVASMLKRLVDECAEYCGTCNDDVKPEAHQVFYSGCQAILYVLC 435

Query: 435 FRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAKVANLFTPSETFI 494
           FRMRSI+EIPR +SQ     +  +L+H+L+PL VCLPS+V EFL+QAK   LF  SE+FI
Sbjct: 436 FRMRSIVEIPRFQSQ--FRSLESILSHKLNPLLVCLPSVVSEFLKQAKAGGLFIVSESFI 495

Query: 495 FNGLLESEYSRSFGGLERLDMFFPFDPCLLK 524
           F+ L ESE SR+FGG ERLD FFPFDPCLLK
Sbjct: 496 FDDLHESELSRAFGGFERLDTFFPFDPCLLK 513

[Close]

BLAST of IVF0002165 vs. TAIR 10
Match: AT2G39240.1 (RNA polymerase I specific transcription initiation factor RRN3 protein )

HSP 1 Score: 398.7 bits (1023), Expect = 8.0e-111
Identity = 236/536 (44.03%), Postives = 328/536 (61.19%), Query Frame = 0


Query: 14  DMEDVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHHRDRLSPDE------------ 73
           ++E  +L+D  LV  IR  L+S   GDTD YN+LV +++ + + S D+            
Sbjct: 5   EVETADLSDKALVSAIREVLASAQSGDTDQYNELVQLMYIKKKKSGDDAMAQPEVPDDVD 64

Query: 74  -VALLVTCLKALSGAVSCIDIIQHESLLAAIFKMSLWDYGPNVMDSLIELIISLAVSNGK 133
            VA   T LK LS +V+C+D + H  LL  I    +WD+ PNV+ +L++LIISLA ++GK
Sbjct: 65  VVAQRETLLKILSHSVACLDDVHHNHLLQLILGTRIWDHKPNVIYALLDLIISLATTSGK 124

Query: 134 YVNSCLDMLVNNFMPPNSYMDFLKKPHGLTKKDEVLSRVHTALKDISDLVPLAPLRLEQI 193
           +++SCLD LV+N       +D         K  EVLSRVH AL  IS LVPLAP  L  I
Sbjct: 125 HLSSCLDTLVSNLRSQPRKLD--------NKMLEVLSRVHAALHKISYLVPLAPSILLPI 184

Query: 194 VVHKMQRVFFKESLTTI--YVENMLRLEKGA-LSEFVGRKILTALVDKLLDLDVEIGWDD 253
           +   M  V  K  L  +  YV+N+L+LE  + + + VG+ IL  ++ +  DLD EI  DD
Sbjct: 185 LAQSMPSVHDKARLQVVVPYVKNLLKLENSSIIGKVVGKDILMMVMGRFRDLDSEIECDD 244

Query: 254 ILQDDFSKGIFEMELEDDDETTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEH 313
            LQ+D S  +F+MEL+                       ++ G ++++ LD L+V +F H
Sbjct: 245 NLQNDSSLAMFDMELD----------------------VAVEGTLVSKLLDDLMVESFNH 304

Query: 314 LESCERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFYACSLDPEVCGARFAVSLADM 373
           L+SC+  GRL+EVF+ L  SF+  +L   K KF+QF++FYACSLDPE CG +FA  L + 
Sbjct: 305 LKSCQDAGRLDEVFENLFESFENLILNTQKLKFSQFLMFYACSLDPENCGVKFASKLLEK 364

Query: 374 FVSCNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAH 433
           F+S N+  + R +AV+YLAS+L+R  FL+ S V ++LKRLVD C +Y  T N D  P+ H
Sbjct: 365 FLSSNNNQVTRTNAVTYLASYLARANFLSASFVASMLKRLVDECADYCRTCNDDARPEVH 424

Query: 434 KVFYSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQ 493
           +VFYSGCQAI+YVLCFRMRSILE+P  +SQ  L P+  +L+H+L PL+VCL S+V EFL 
Sbjct: 425 QVFYSGCQAILYVLCFRMRSILEVPHFQSQ--LTPLESVLSHKLDPLRVCLSSVVSEFLI 484

Query: 494 QAKVANLFTPSETFIFNGLLESEYSRSFGGLERLDMFFPFDPCLLKNVTDIFGHIL 534
           QAK   LF  S+ FIF+ L ESE SR+ GG      FFPF   L K+ + I  H +
Sbjct: 485 QAKACGLFIVSDAFIFDDLSESELSRALGG------FFPFPWLLEKSNSLISPHFI 502

The following BLAST results are available for this feature:

BLAST of IVF0002165 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B2RS91	2.4e-35	27.75	RNA polymerase I-specific transcription initiation factor RRN3 OS=Mus musculus O...	[more]
Q5R4N9	1.4e-30	27.33	RNA polymerase I-specific transcription initiation factor RRN3 OS=Pongo abelii O...	[more]
Q9NYV6	6.7e-30	26.79	RNA polymerase I-specific transcription initiation factor RRN3 OS=Homo sapiens O...	[more]
Q10110	8.5e-25	24.87	RNA polymerase I-specific transcription initiation factor rrn3 OS=Schizosaccharo...	[more]
P36070	5.2e-14	22.01	RNA polymerase I-specific transcription initiation factor RRN3 OS=Saccharomyces ...	[more]

BLAST of IVF0002165 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AV30	1.5e-295	100.00	RNA polymerase I-specific transcription initiation factor RRN3 OS=Cucumis melo O...	[more]
A0A5D3D051	1.5e-295	100.00	RNA polymerase I-specific transcription initiation factor RRN3 OS=Cucumis melo v...	[more]
A0A5A7U3Y2	1.4e-291	95.79	RNA polymerase I-specific transcription initiation factor RRN3 OS=Cucumis melo v...	[more]
A0A0A0L7G6	8.5e-286	96.37	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122360 PE=3 SV=1	[more]
A0A6J1F0A3	6.1e-268	90.25	RNA polymerase I-specific transcription initiation factor RRN3-like isoform X1 O...	[more]

BLAST of IVF0002165 vs. NCBI nr


Match Name	Identity	Description
XP_008438040.1	99.81	PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3 [Cucum...	[more]
KAA0048966.1	95.61	RNA polymerase I-specific transcription initiation factor RRN3 [Cucumis melo var...	[more]
KAE8650250.1	94.75	hypothetical protein Csa_010750 [Cucumis sativus]	[more]
XP_004133864.1	96.18	RNA polymerase I-specific transcription initiation factor RRN3 [Cucumis sativus]...	[more]
XP_038896673.1	92.94	RNA polymerase I-specific transcription initiation factor RRN3-like [Benincasa h...	[more]

BLAST of IVF0002165 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34750.1	2.5e-152	54.19	RNA polymerase I specific transcription initiation factor RRN3 protein	[more]
AT1G30590.1	5.1e-134	51.86	RNA polymerase I specific transcription initiation factor RRN3 protein	[more]
AT2G39240.1	8.0e-111	44.03	RNA polymerase I specific transcription initiation factor RRN3 protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007991	RNA polymerase I specific transcription initiation factor RRN3	PFAM	PF05327	RRN3	coord: 20..528 e-value: 1.1E-116 score: 390.7
IPR007991	RNA polymerase I specific transcription initiation factor RRN3	PANTHER	PTHR12790	TRANSCRIPTION INITIATION FACTOR IA RRN3	coord: 9..527

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0002165.2	IVF0002165.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006361	transcription initiation from RNA polymerase I promoter
biological_process	GO:0006413	translational initiation
cellular_component	GO:0005634	nucleus
molecular_function	GO:0001042	RNA polymerase I core binding
molecular_function	GO:0001181	RNA polymerase I general transcription initiation factor activity
molecular_function	GO:0003743	translation initiation factor activity