IVF0002057 (gene) Melon (IVF77) v1

BLAST of IVF0002057 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 9.0e-06
Identity = 57/260 (21.92%), Postives = 104/260 (40.00%), Query Frame = 0

Query: 28  NNISIVNLN--------NDNFLLWKFQVVTTLEGYDLEKYLD---------------PHL 87
           NN SI+N+N        + N+L+W  QV    +GY+L  +LD               P +
Sbjct: 11  NNTSILNVNMSNVTKLTSTNYLMWSRQVHALFDGYELAGFLDGSTTMPPATIGTDAAPRV 70

Query: 88  EP---------LSQFLNLLGSMNKDILNQMLNCNSTMDISANLHGVYSARCLAQAMQFKS 147
            P            +  +LG+++  +   +    +   I   L  +Y+        Q ++
Sbjct: 71  NPDYTRWKRQDKLIYSAVLGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRT 130

Query: 148 KLQNIKKEAMPLKEYFMKIQQCVNAMASVNKPVSPEDHILYVLVELGLEYESMISVICAY 207
           +L+   K    + +Y   +    + +A + KP+  ++ +  VL  L  EY+ +I  I A 
Sbjct: 131 QLKQWTKGTKTIDDYMQGLVTRFDQLALLGKPMDHDEQVERVLENLPEEYKPVIDQIAAK 190

Query: 208 TDSPSIQDITSLLLTKESRIECTFSVESSLPSANLAA--QGLENNIDQPIKQQNTYKSNT 254
              P++ +I   LL  ES+I    S      +AN  +       N +    + N Y +  
Sbjct: 191 DTPPTLTEIHERLLNHESKILAVSSATVIPITANAVSHRNTTTTNNNNNGNRNNRYDNRN 250

BLAST of IVF0002057 vs. ExPASy TrEMBL
Match: A0A5D3BU96 (Integrase, catalytic core OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G001390 PE=4 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 5.2e-89
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0

Query: 85  MLNCNSTMDISANLHGVYSARCLAQAMQFKSKLQNIKKEAMPLKEYFMKIQQCVNAMASV 144
           MLNCNSTMDISANLHGVYSARCLAQAMQFKSKLQNIKKEAMPLKEYFMKIQQCVNAMASV
Sbjct: 1   MLNCNSTMDISANLHGVYSARCLAQAMQFKSKLQNIKKEAMPLKEYFMKIQQCVNAMASV 60

Query: 145 NKPVSPEDHILYVLVELGLEYESMISVICAYTDSPSIQDITSLLLTKESRIECTFSVESS 204
           NKPVSPEDHILYVLVELGLEYESMISVICAYTDSPSIQDITSLLLTKESRIECTFSVESS
Sbjct: 61  NKPVSPEDHILYVLVELGLEYESMISVICAYTDSPSIQDITSLLLTKESRIECTFSVESS 120

Query: 205 LPSANLAAQGLENNIDQPIKQQNTYKSNTNNRRGRGWGRSNYGGRFNRNNMSLL 259
           LPSANLAAQGLENNIDQPIKQQNTYKSNTNNRRGRGWGRSNYGGRFNRNNMSLL
Sbjct: 121 LPSANLAAQGLENNIDQPIKQQNTYKSNTNNRRGRGWGRSNYGGRFNRNNMSLL 174

BLAST of IVF0002057 vs. ExPASy TrEMBL
Match: A0A5A7VGA1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold790G00100 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 7.0e-70
Identity = 161/261 (61.69%), Postives = 175/261 (67.05%), Query Frame = 0

Query: 1   MSSQSSIMRTGNADDASSLISKMFNSGNNISIVNLNNDNFLLWKFQVVTTLEGYDLEKYL 60
           M  QS         DASS I +MF+S N ISIV LN+DNFLLW+FQVVT LEGYDLEKYL
Sbjct: 1   MRIQSWTCNIEEHQDASSPIFEMFSSRNKISIVELNDDNFLLWRFQVVTALEGYDLEKYL 60

Query: 61  DPHLEPLSQFLN-------------------------------------LLGSMNKDILN 120
           D  LEP SQF N                                     LLG MN++ILN
Sbjct: 61  DSSLEPPSQFFNVKVETPQPPLACLLTNYPNSKPRIQEVKTQDQLISSWLLGLMNENILN 120

Query: 121 QMLNCNSTMDISANLHGVYSARCLAQAMQFKSKLQNIKKEAMPLKEYFMKIQQCVNAMAS 180
           QMLNCNST DI ANLHG+Y ARCLAQAMQ KSKLQNIKK  +PLKEYFMKIQQCV+A+AS
Sbjct: 121 QMLNCNSTKDIWANLHGIYFARCLAQAMQLKSKLQNIKKRVVPLKEYFMKIQQCVDALAS 180

Query: 181 VNKPVSPEDHILYVLVELGLEYESMISVICAYTDSPSIQDITSLLLTKESRIECTFSVES 225
           V KP   +DHILY+L  LG EYESMIS  C Y  SPSIQDITSLLLTKES I+CT   ES
Sbjct: 181 VGKPTPSDDHILYILAGLGPEYESMISDFCLYC-SPSIQDITSLLLTKESCIKCTIKAES 240

BLAST of IVF0002057 vs. ExPASy TrEMBL
Match: A0A5A7U233 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00060 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 6.0e-61
Identity = 147/286 (51.40%), Postives = 190/286 (66.43%), Query Frame = 0

Query: 1   MSSQSSIMRTGNADDASSLISKMFNSGNNISIVNLNNDNFLLWKFQVVTTLEGYDLEKYL 60
           MSS SS++   N  +ASS I+++F SGN IS+V LN+D FLLWKFQ++T LE YDLE +L
Sbjct: 1   MSSTSSLLGVENT-EASSPINQIFGSGNKISLVKLNDDTFLLWKFQILTALEAYDLENFL 60

Query: 61  DPHLEPLSQFLN------------------------------LLGSMNKDILNQMLNCNS 120
           +   EP S++L                               LLGSM+++ILNQML+C S
Sbjct: 61  ESESEPPSKYLISTESSSASATGTPNPAYKVWKRQDRLISSWLLGSMSEEILNQMLHCKS 120

Query: 121 TMDISANLHGVYSARCLAQAMQFKSKLQNIKKEAMPLKEYFMKIQQCVNAMASVNKPVSP 180
             +I   L G++S+R LAQAMQFK+KL NIKK +MPLKEYF+KI QCV+A+AS+NKPVS 
Sbjct: 121 AKEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQCVDALASINKPVSS 180

Query: 181 EDHILYVLVELGLEYESMISVICAYTDSPSIQDITSLLLTKESRIECTFSVESSLPSANL 240
           +DHILY+L  LG +Y+SMISVI A TDSPS+Q++ SLLLT+ES+ E     E++LPS N+
Sbjct: 181 DDHILYILAGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNESKLISETALPSVNI 240

Query: 241 AAQGLENNIDQPIK-QQNTYKSN--TNNRRGRGWGRSNYGGRFNRN 254
             Q  E   +  I+  QN Y +N   N R GRG GRSN G R NRN
Sbjct: 241 VTQTTEKGAESYIRTNQNNYHNNHSYNQRGGRGNGRSNRGRRGNRN 285

BLAST of IVF0002057 vs. ExPASy TrEMBL
Match: A0A5D3CH97 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25G00040 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 6.0e-61
Identity = 147/286 (51.40%), Postives = 190/286 (66.43%), Query Frame = 0

Query: 1   MSSQSSIMRTGNADDASSLISKMFNSGNNISIVNLNNDNFLLWKFQVVTTLEGYDLEKYL 60
           MSS SS++   N  +ASS I+++F SGN IS+V LN+D FLLWKFQ++T LE YDLE +L
Sbjct: 1   MSSTSSLLGVENT-EASSPINQIFGSGNKISLVKLNDDTFLLWKFQILTALEAYDLENFL 60

Query: 61  DPHLEPLSQFLN------------------------------LLGSMNKDILNQMLNCNS 120
           +   EP S++L                               LLGSM+++ILNQML+C S
Sbjct: 61  ESESEPPSKYLISTESSSASATGTPNPAYKVWKRQDRLISSWLLGSMSEEILNQMLHCKS 120

Query: 121 TMDISANLHGVYSARCLAQAMQFKSKLQNIKKEAMPLKEYFMKIQQCVNAMASVNKPVSP 180
             +I   L G++S+R LAQAMQFK+KL NIKK +MPLKEYF+KI QCV+A+AS+NKPVS 
Sbjct: 121 AKEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQCVDALASINKPVSS 180

Query: 181 EDHILYVLVELGLEYESMISVICAYTDSPSIQDITSLLLTKESRIECTFSVESSLPSANL 240
           +DHILY+L  LG +Y+SMISVI A TDSPS+Q++ SLLLT+ES+ E     E++LPS N+
Sbjct: 181 DDHILYILAGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNESKLISETALPSVNI 240

Query: 241 AAQGLENNIDQPIK-QQNTYKSN--TNNRRGRGWGRSNYGGRFNRN 254
             Q  E   +  I+  QN Y +N   N R GRG GRSN G R NRN
Sbjct: 241 VTQTTEKGAESYIRTNQNNYHNNHSYNQRGGRGNGRSNRGRRGNRN 285

BLAST of IVF0002057 vs. ExPASy TrEMBL
Match: A0A5A7UB21 (Keratin, type II cytoskeletal 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1486G00150 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 3.5e-53
Identity = 126/263 (47.91%), Postives = 169/263 (64.26%), Query Frame = 0

Query: 1   MSSQSSIMRTGNADDASSLISKMFNSGNNISIVNLNNDNFLLWKFQVVTTLEGYDLEKYL 60
           MSS SS +   N +        +F SGN IS+V L++DNFLLWKFQ++T LE YDLE + 
Sbjct: 1   MSSNSSPLGVENTE------VSIFGSGNKISLVKLSDDNFLLWKFQILTALEAYDLENFF 60

Query: 61  DPHLEPLSQFLN------------------------------LLGSMNKDILNQMLNCNS 120
           +  LEP S++L                               LLGSM+++ILNQM++C S
Sbjct: 61  ESELEPPSKYLTSTGSSSTSATRTPNPEYKVWKRHNRLISPWLLGSMSEEILNQMVHCKS 120

Query: 121 TMDISANLHGVYSARCLAQAMQFKSKLQNIKKEAMPLKEYFMKIQQCVNAMASVNKPVSP 180
             +I   L G++S+R LAQAMQFK+KL NIKK +M LKEYF+KIQQCV+A+AS+NKPVS 
Sbjct: 121 AKEIWGTLQGIFSSRYLAQAMQFKNKLHNIKKGSMSLKEYFLKIQQCVDALASINKPVSS 180

Query: 181 EDHILYVLVELGLEYESMISVICAYTDSPSIQDITSLLLTKESRIECTFSVESSLPSANL 233
           +DHILY+LV LG +Y+SMIS+I A TDSPSIQ++ SLLLT+ES+ E     E++LP   +
Sbjct: 181 DDHILYILVGLGYDYQSMISIISARTDSPSIQEVMSLLLTQESQNESKLISETALPYVKI 240

BLAST of IVF0002057 vs. NCBI nr
Match: KAA0060692.1 (Integrase, catalytic core [Cucumis melo var. makuwa] >TYK03301.1 Integrase, catalytic core [Cucumis melo var. makuwa])

HSP 1 Score: 338 bits (867), Expect = 1.77e-115
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0

Query: 85  MLNCNSTMDISANLHGVYSARCLAQAMQFKSKLQNIKKEAMPLKEYFMKIQQCVNAMASV 144
           MLNCNSTMDISANLHGVYSARCLAQAMQFKSKLQNIKKEAMPLKEYFMKIQQCVNAMASV
Sbjct: 1   MLNCNSTMDISANLHGVYSARCLAQAMQFKSKLQNIKKEAMPLKEYFMKIQQCVNAMASV 60

Query: 145 NKPVSPEDHILYVLVELGLEYESMISVICAYTDSPSIQDITSLLLTKESRIECTFSVESS 204
           NKPVSPEDHILYVLVELGLEYESMISVICAYTDSPSIQDITSLLLTKESRIECTFSVESS
Sbjct: 61  NKPVSPEDHILYVLVELGLEYESMISVICAYTDSPSIQDITSLLLTKESRIECTFSVESS 120

Query: 205 LPSANLAAQGLENNIDQPIKQQNTYKSNTNNRRGRGWGRSNYGGRFNRNNMSLL 258
           LPSANLAAQGLENNIDQPIKQQNTYKSNTNNRRGRGWGRSNYGGRFNRNNMSLL
Sbjct: 121 LPSANLAAQGLENNIDQPIKQQNTYKSNTNNRRGRGWGRSNYGGRFNRNNMSLL 174

BLAST of IVF0002057 vs. NCBI nr
Match: KAA0066107.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK15146.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 276 bits (706), Expect = 1.03e-89
Identity = 158/247 (63.97%), Postives = 172/247 (69.64%), Query Frame = 0

Query: 15  DASSLISKMFNSGNNISIVNLNNDNFLLWKFQVVTTLEGYDLEKYLDPHLEPLSQFLN-- 74
           DASS I +MF+S N ISIV LN+DNFLLW+FQVVT LEGYDLEKYLD  LEP SQF N  
Sbjct: 15  DASSPIFEMFSSRNKISIVELNDDNFLLWRFQVVTALEGYDLEKYLDSSLEPPSQFFNVK 74

Query: 75  -----------------------------------LLGSMNKDILNQMLNCNSTMDISAN 134
                                              LLG MN++ILNQMLNCNST DI AN
Sbjct: 75  VETPQPPLACLLTNYPNSKPRIQEVKTQDQLISSWLLGLMNENILNQMLNCNSTKDIWAN 134

Query: 135 LHGVYSARCLAQAMQFKSKLQNIKKEAMPLKEYFMKIQQCVNAMASVNKPVSPEDHILYV 194
           LHG+Y ARCLAQAMQ KSKLQNIKK  +PLKEYFMKIQQCV+A+ASV KP   +DHILY+
Sbjct: 135 LHGIYFARCLAQAMQLKSKLQNIKKRVVPLKEYFMKIQQCVDALASVGKPTPSDDHILYI 194

Query: 195 LVELGLEYESMISVICAYTDSPSIQDITSLLLTKESRIECTFSVESSLPSANLAAQGLEN 224
           L  LG EYESMIS  C Y  SPSIQDITSLLLTKES I+CT   ESSL SANL AQGLE 
Sbjct: 195 LAGLGPEYESMISDFCLYC-SPSIQDITSLLLTKESCIKCTIKAESSLSSANLDAQGLEK 254

BLAST of IVF0002057 vs. NCBI nr
Match: KAA0048297.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 244 bits (623), Expect = 5.93e-71
Identity = 147/286 (51.40%), Postives = 190/286 (66.43%), Query Frame = 0

Query: 1   MSSQSSIMRTGNADDASSLISKMFNSGNNISIVNLNNDNFLLWKFQVVTTLEGYDLEKYL 60
           MSS SS++   N + ASS I+++F SGN IS+V LN+D FLLWKFQ++T LE YDLE +L
Sbjct: 1   MSSTSSLLGVENTE-ASSPINQIFGSGNKISLVKLNDDTFLLWKFQILTALEAYDLENFL 60

Query: 61  DPHLEPLSQFLN------------------------------LLGSMNKDILNQMLNCNS 120
           +   EP S++L                               LLGSM+++ILNQML+C S
Sbjct: 61  ESESEPPSKYLISTESSSASATGTPNPAYKVWKRQDRLISSWLLGSMSEEILNQMLHCKS 120

Query: 121 TMDISANLHGVYSARCLAQAMQFKSKLQNIKKEAMPLKEYFMKIQQCVNAMASVNKPVSP 180
             +I   L G++S+R LAQAMQFK+KL NIKK +MPLKEYF+KI QCV+A+AS+NKPVS 
Sbjct: 121 AKEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQCVDALASINKPVSS 180

Query: 181 EDHILYVLVELGLEYESMISVICAYTDSPSIQDITSLLLTKESRIECTFSVESSLPSANL 240
           +DHILY+L  LG +Y+SMISVI A TDSPS+Q++ SLLLT+ES+ E     E++LPS N+
Sbjct: 181 DDHILYILAGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNESKLISETALPSVNI 240

Query: 241 AAQGLENNIDQPIK-QQNTYKSNT--NNRRGRGWGRSNYGGRFNRN 253
             Q  E   +  I+  QN Y +N   N R GRG GRSN G R NRN
Sbjct: 241 VTQTTEKGAESYIRTNQNNYHNNHSYNQRGGRGNGRSNRGRRGNRN 285

BLAST of IVF0002057 vs. NCBI nr
Match: TYK10642.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 244 bits (623), Expect = 5.93e-71
Identity = 147/286 (51.40%), Postives = 190/286 (66.43%), Query Frame = 0

Query: 1   MSSQSSIMRTGNADDASSLISKMFNSGNNISIVNLNNDNFLLWKFQVVTTLEGYDLEKYL 60
           MSS SS++   N + ASS I+++F SGN IS+V LN+D FLLWKFQ++T LE YDLE +L
Sbjct: 1   MSSTSSLLGVENTE-ASSPINQIFGSGNKISLVKLNDDTFLLWKFQILTALEAYDLENFL 60

Query: 61  DPHLEPLSQFLN------------------------------LLGSMNKDILNQMLNCNS 120
           +   EP S++L                               LLGSM+++ILNQML+C S
Sbjct: 61  ESESEPPSKYLISTESSSASATGTPNPAYKVWKRQDRLISSWLLGSMSEEILNQMLHCKS 120

Query: 121 TMDISANLHGVYSARCLAQAMQFKSKLQNIKKEAMPLKEYFMKIQQCVNAMASVNKPVSP 180
             +I   L G++S+R LAQAMQFK+KL NIKK +MPLKEYF+KI QCV+A+AS+NKPVS 
Sbjct: 121 AKEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQCVDALASINKPVSS 180

Query: 181 EDHILYVLVELGLEYESMISVICAYTDSPSIQDITSLLLTKESRIECTFSVESSLPSANL 240
           +DHILY+L  LG +Y+SMISVI A TDSPS+Q++ SLLLT+ES+ E     E++LPS N+
Sbjct: 181 DDHILYILAGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNESKLISETALPSVNI 240

Query: 241 AAQGLENNIDQPIK-QQNTYKSNT--NNRRGRGWGRSNYGGRFNRN 253
             Q  E   +  I+  QN Y +N   N R GRG GRSN G R NRN
Sbjct: 241 VTQTTEKGAESYIRTNQNNYHNNHSYNQRGGRGNGRSNRGRRGNRN 285

BLAST of IVF0002057 vs. NCBI nr
Match: KAA0053143.1 (keratin, type II cytoskeletal 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 220 bits (561), Expect = 9.72e-68
Identity = 120/238 (50.42%), Postives = 159/238 (66.81%), Query Frame = 0

Query: 23  MFNSGNNISIVNLNNDNFLLWKFQVVTTLEGYDLEKYLDPHLEPLSQFLN---------- 82
           +F SGN IS+V L++DNFLLWKFQ++T LE YDLE + +  LEP S++L           
Sbjct: 17  IFGSGNKISLVKLSDDNFLLWKFQILTALEAYDLENFFESELEPPSKYLTSTGSSSTSAT 76

Query: 83  --------------------LLGSMNKDILNQMLNCNSTMDISANLHGVYSARCLAQAMQ 142
                               LLGSM+++ILNQM++C S  +I   L G++S+R LAQAMQ
Sbjct: 77  RTPNPEYKVWKRHNRLISPWLLGSMSEEILNQMVHCKSAKEIWGTLQGIFSSRYLAQAMQ 136

Query: 143 FKSKLQNIKKEAMPLKEYFMKIQQCVNAMASVNKPVSPEDHILYVLVELGLEYESMISVI 202
           FK+KL NIKK +M LKEYF+KIQQCV+A+AS+NKPVS +DHILY+LV LG +Y+SMIS+I
Sbjct: 137 FKNKLHNIKKGSMSLKEYFLKIQQCVDALASINKPVSSDDHILYILVGLGYDYQSMISII 196

Query: 203 CAYTDSPSIQDITSLLLTKESRIECTFSVESSLPSANLAAQGLENNIDQPIKQ-QNTY 229
            A TDSPSIQ++ SLLLT+ES+ E     E++LP   +  Q  E   +  I+  QN Y
Sbjct: 197 SARTDSPSIQEVMSLLLTQESQNESKLISETALPYVKIVTQTTEKGAESYIRNSQNNY 254

BLAST of IVF0002057 vs. TAIR 10
Match: AT5G48050.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G34070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 50.1 bits (118), Expect = 3.2e-06
Identity = 49/192 (25.52%), Postives = 97/192 (50.52%), Query Frame = 0

Query: 73  LLGSMNKDILNQMLNCNST-MDISANLHGVYSARCLAQAMQFKSKLQNIKKEAMPLKEYF 132
           + G++   +L+ ++    T  D+  +L  ++     A+A+QF+++L+    + + + EY 
Sbjct: 78  IYGTITDSLLDTIIKVGCTARDLWLSLENLFRDNKEARALQFENELRTTTIDDLSVHEYC 137

Query: 133 MKIQQCVNAMASVNKPVSPEDHILYVLVELGLEYESMISVICAYTDSPSIQDITSLLLTK 192
            K++   + + +V+ P+S    ++++L  L  +Y+ +++VI   +  PS  +  S+LL +
Sbjct: 138 QKLKSLSDLLTNVDSPISDRVLVMHLLNGLTEKYDYILNVIKHKSPFPSFTEARSMLLME 197

Query: 193 ESRIECTFSVESSLPSANLAAQGLENNIDQPIKQQNTYKS---NTNNRRGRG------WG 252
           ESR+  +   +SSL   N     L N +    +QQ  Y     N N+  GRG       G
Sbjct: 198 ESRL--SNKSKSSLSHTN--HPSLSNVLFTVPRQQERYPQEYHNNNSNMGRGRSKKKNRG 257

Query: 253 RSNYGGRFNRNN 255
             +  GR+N NN
Sbjct: 258 GGSSDGRYNNNN 265

BLAST of IVF0002057 vs. TAIR 10
Match: AT1G34070.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G48050.1); Has 648 Blast hits to 647 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 25; Plants - 607; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.1 bits (113), Expect = 1.2e-05
Identity = 50/240 (20.83%), Postives = 111/240 (46.25%), Query Frame = 0

Query: 32  IVNLNNDNFLLWKFQVVTTLEGYDLEKYLDPHLEPLSQ------------FLNLLGSMN- 91
           ++++   N+  W+   +T    +D+  ++D  L P +              L+L G++  
Sbjct: 23  MLDIEESNYDAWRELFLTHCLSFDVMGHIDGTLLPTNANDVNWQKRDGIVKLSLYGTLTP 82

Query: 92  KDILNQMLNCNSTMDISANLHGVYSARCLAQAMQFKSKLQNIKKEAMPLKEYFMKIQQCV 151
           K      +  +++ DI   +   +     A+A++  S+L+      M + +Y+ K+++  
Sbjct: 83  KQFQGSFVTSSTSRDIWLRIKNQFRNNKDARALRLDSELRTKDIGDMRVADYYRKMKKLA 142

Query: 152 NAMASVNKPVSPEDHILYVLVELGLEYESMISVICAYTDSPSIQDITSLLLTKESRIECT 211
           +++ +V+ PV+  + ++YVL  L  +++++I+VI      PS  D  ++L  +E R++  
Sbjct: 143 DSLRNVDVPVTDRNLVMYVLNGLNPKFDNIINVIKHRQPFPSFDDAATMLQEEEDRLKRA 202

Query: 212 FSVESSLPSANLAAQGLENNIDQPIKQQNTYKSNTNNRRGRGWGRSNY---GGRFNRNNM 256
                +    + ++  L  +   P+        N    RGRG G + +   GGRF+  NM
Sbjct: 203 IKPNPTHVDHSSSSTVLACSEAPPVTNFQRSGGNQMGYRGRGRGNNIFRGRGGRFSYYNM 262