IVF0001987 (gene) Melon (IVF77) v1

Overview
NameIVF0001987
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCACTA en-spm transposon protein
Locationchr11: 1524248 .. 1524646 (-)
RNA-Seq ExpressionIVF0001987
SyntenyIVF0001987
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGTCACTCGCACGACTAGGGGTGTTCCCACGGGATCACTCGCACGATTTAAGGGTGTTTGTACGGTCTCAATCACTCAGGTGTGCTCCATTAAACACACGACGTTATGATTATGTTTCTAACGAAAAGTTAACAGATCACCTAGTGGGACTAGTAGTCACTACAAGAAAATGGAGCATTTGTGATGCCAAAAAAGACGTCGGCATAAAGAACGTCGGGAAAAAGGGTATTCTCGATGCTGTGAAGACTGCGTCAGGAGAGGCGTCGGGAAAAAGTGTTTTCCAGACGCATCAAACAGGCGTCGGCCACGCGGCGTCGGGAAAAGACCAAATTAATTTTAAAAAACACATTATTCTTTATGCCATGCACAGTGCGTCGGAATGGCGTCAGAAATAG

mRNA sequence

ATGGGGTCACTCGCACGACTAGGGGTGTTCCCACGGGATCACTCGCACGATTTAAGGGTGTTTGTACGGTCTCAATCACTCAGGTGTGCTCCATTAAACACACGACGTTATGATTATGTTTCTAACGAAAAGTTAACAGATCACCTAGTGGGACTAGTAGTCACTACAAGAAAATGGAGCATTTGTGATGCCAAAAAAGACGTCGGCATAAAGAACGTCGGGAAAAAGGGTATTCTCGATGCTGTGAAGACTGCGTCAGGAGAGGCGTCGGGAAAAAGTGTTTTCCAGACGCATCAAACAGGCGTCGGCCACGCGGCGTCGGGAAAAGACCAAATTAATTTTAAAAAACACATTATTCTTTATGCCATGCACAGTGCGTCGGAATGGCGTCAGAAATAG

Coding sequence (CDS)

ATGGGGTCACTCGCACGACTAGGGGTGTTCCCACGGGATCACTCGCACGATTTAAGGGTGTTTGTACGGTCTCAATCACTCAGGTGTGCTCCATTAAACACACGACGTTATGATTATGTTTCTAACGAAAAGTTAACAGATCACCTAGTGGGACTAGTAGTCACTACAAGAAAATGGAGCATTTGTGATGCCAAAAAAGACGTCGGCATAAAGAACGTCGGGAAAAAGGGTATTCTCGATGCTGTGAAGACTGCGTCAGGAGAGGCGTCGGGAAAAAGTGTTTTCCAGACGCATCAAACAGGCGTCGGCCACGCGGCGTCGGGAAAAGACCAAATTAATTTTAAAAAACACATTATTCTTTATGCCATGCACAGTGCGTCGGAATGGCGTCAGAAATAG

Protein sequence

MGSLARLGVFPRDHSHDLRVFVRSQSLRCAPLNTRRYDYVSNEKLTDHLVGLVVTTRKWSICDAKKDVGIKNVGKKGILDAVKTASGEASGKSVFQTHQTGVGHAASGKDQINFKKHIILYAMHSASEWRQK
Homology
BLAST of IVF0001987 vs. ExPASy TrEMBL
Match: A0A5A7TTZ4 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G001010 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 5.0e-64
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0

Query: 1   MGSLARLGVFPRDHSHDLRVFVRSQSLRCAPLNTRRYDYVSNEKLTDHLVGLVVTTRKWS 60
           MGSLARLGVFPRDHSHDLRVFVRSQSLRCAPLNTRRYDYVSNEKLTDHLVGLVVTTRKWS
Sbjct: 1   MGSLARLGVFPRDHSHDLRVFVRSQSLRCAPLNTRRYDYVSNEKLTDHLVGLVVTTRKWS 60

Query: 61  ICDAKKDVGIKNVGKKGILDAVKTASGEASGKSVFQTHQTGVGHAASGKDQINFKKHIIL 120
           ICDAKKDVGIKNVGKKGILDAVKTASGEASGKSVFQTHQTGVGHAASGKDQINFKKHIIL
Sbjct: 61  ICDAKKDVGIKNVGKKGILDAVKTASGEASGKSVFQTHQTGVGHAASGKDQINFKKHIIL 120

Query: 121 YAMH 125
           YAMH
Sbjct: 121 YAMH 124

BLAST of IVF0001987 vs. ExPASy TrEMBL
Match: A0A5A7TPY2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold320G00340 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 1.0e-16
Identity = 50/74 (67.57%), Postives = 57/74 (77.03%), Query Frame = 0

Query: 52  LVVTTRKWSICDAKKDVGIKNVGKKGILDAVKTASGEASGKSVFQTHQTGVGHAASGKDQ 111
           LVV  +K    D KKDV IKNV KKGI DA++TAS +ASGK+ F THQTGVGHAASGK Q
Sbjct: 11  LVVHYKKTEHSDTKKDVSIKNVEKKGIPDAIETASRKASGKTFFPTHQTGVGHAASGKSQ 70

Query: 112 INFKKHIILYAMHS 126
           +N KKHIIL  +HS
Sbjct: 71  VNLKKHIILDVVHS 84

BLAST of IVF0001987 vs. ExPASy TrEMBL
Match: A0A5D3DCG2 (Trans-resveratrol di-O-methyltransferase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold101G00130 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 9.0e-13
Identity = 43/56 (76.79%), Postives = 47/56 (83.93%), Query Frame = 0

Query: 72  NVGKKGILDAVKTASGEASGKSVFQTHQTGVGHAASGKDQINFKKHIILYAMHSAS 128
           +VGKKGI DAV+TA GEASGK+ F THQTGVGHA S K QINFKKHII  A+HSAS
Sbjct: 2   DVGKKGIPDAVETAPGEASGKTFFPTHQTGVGHATSRKGQINFKKHIIPDAVHSAS 57

BLAST of IVF0001987 vs. ExPASy TrEMBL
Match: A0A5D3DHG6 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G00370 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.9e-10
Identity = 39/60 (65.00%), Postives = 42/60 (70.00%), Query Frame = 0

Query: 50  VGLVVTTRKWSICDAKKDVGIKNVGKKGILDAVKTASGEASGKSVFQTHQTGVGHAASGK 109
           +G   TTRKWSI DAKKDV IKNV  KG  DA+ TASG+ASGK  F TH  GVG   SGK
Sbjct: 13  IGPTFTTRKWSIPDAKKDVDIKNVENKGFPDAINTASGDASGKHSFPTHHEGVGKYLSGK 72

BLAST of IVF0001987 vs. ExPASy TrEMBL
Match: A0A5A7USQ8 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold874G00430 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 2.5e-10
Identity = 38/56 (67.86%), Postives = 42/56 (75.00%), Query Frame = 0

Query: 55  TTRKWSICDAKKDVGIKNVGKKGILDAVKTASGEASGKSVFQTHQTGVGHAASGKD 111
           TT KWSI DAKKDVGIKNV  KG  DA+ TASG+ASGK  F THQ GVG  +S K+
Sbjct: 19  TTSKWSISDAKKDVGIKNVENKGFPDAINTASGDASGKHSFPTHQEGVGKFSSEKE 74

BLAST of IVF0001987 vs. NCBI nr
Match: KAA0045596.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 254 bits (649), Expect = 4.51e-81
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0

Query: 1   MGSLARLGVFPRDHSHDLRVFVRSQSLRCAPLNTRRYDYVSNEKLTDHLVGLVVTTRKWS 60
           MGSLARLGVFPRDHSHDLRVFVRSQSLRCAPLNTRRYDYVSNEKLTDHLVGLVVTTRKWS
Sbjct: 1   MGSLARLGVFPRDHSHDLRVFVRSQSLRCAPLNTRRYDYVSNEKLTDHLVGLVVTTRKWS 60

Query: 61  ICDAKKDVGIKNVGKKGILDAVKTASGEASGKSVFQTHQTGVGHAASGKDQINFKKHIIL 120
           ICDAKKDVGIKNVGKKGILDAVKTASGEASGKSVFQTHQTGVGHAASGKDQINFKKHIIL
Sbjct: 61  ICDAKKDVGIKNVGKKGILDAVKTASGEASGKSVFQTHQTGVGHAASGKDQINFKKHIIL 120

Query: 121 YAMH 124
           YAMH
Sbjct: 121 YAMH 124

BLAST of IVF0001987 vs. NCBI nr
Match: KAA0043601.1 (hypothetical protein E6C27_scaffold320G00340 [Cucumis melo var. makuwa])

HSP 1 Score: 97.8 bits (242), Expect = 7.99e-22
Identity = 50/74 (67.57%), Postives = 57/74 (77.03%), Query Frame = 0

Query: 52  LVVTTRKWSICDAKKDVGIKNVGKKGILDAVKTASGEASGKSVFQTHQTGVGHAASGKDQ 111
           LVV  +K    D KKDV IKNV KKGI DA++TAS +ASGK+ F THQTGVGHAASGK Q
Sbjct: 11  LVVHYKKTEHSDTKKDVSIKNVEKKGIPDAIETASRKASGKTFFPTHQTGVGHAASGKSQ 70

Query: 112 INFKKHIILYAMHS 125
           +N KKHIIL  +HS
Sbjct: 71  VNLKKHIILDVVHS 84

BLAST of IVF0001987 vs. NCBI nr
Match: KAA0051560.1 (trans-resveratrol di-O-methyltransferase-like [Cucumis melo var. makuwa] >TYK21262.1 trans-resveratrol di-O-methyltransferase-like [Cucumis melo var. makuwa])

HSP 1 Score: 84.7 bits (208), Expect = 2.23e-17
Identity = 43/56 (76.79%), Postives = 47/56 (83.93%), Query Frame = 0

Query: 72  NVGKKGILDAVKTASGEASGKSVFQTHQTGVGHAASGKDQINFKKHIILYAMHSAS 127
           +VGKKGI DAV+TA GEASGK+ F THQTGVGHA S K QINFKKHII  A+HSAS
Sbjct: 2   DVGKKGIPDAVETAPGEASGKTFFPTHQTGVGHATSRKGQINFKKHIIPDAVHSAS 57

BLAST of IVF0001987 vs. NCBI nr
Match: KAA0031672.1 (hypothetical protein E6C27_scaffold139G004530 [Cucumis melo var. makuwa] >TYK04439.1 hypothetical protein E5676_scaffold409G00380 [Cucumis melo var. makuwa])

HSP 1 Score: 76.3 bits (186), Expect = 5.17e-15
Identity = 39/56 (69.64%), Postives = 41/56 (73.21%), Query Frame = 0

Query: 54  VTTRKWSICDAKKDVGIKNVGKKGILDAVKTASGEASGKSVFQTHQTGVGHAASGK 109
           VTTRKWSI DAKKDVGIKNVG KG  DAV  ASG+AS K  F T+  GVG   SGK
Sbjct: 48  VTTRKWSIPDAKKDVGIKNVGNKGFPDAVNNASGDASRKQSFPTYHEGVGKNTSGK 103

BLAST of IVF0001987 vs. NCBI nr
Match: TYK21926.1 (zinc finger protein ZPR1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 76.3 bits (186), Expect = 4.81e-14
Identity = 41/68 (60.29%), Postives = 47/68 (69.12%), Query Frame = 0

Query: 45  LTDHLVGLVV---TTRKWSICDAKKDVGIKNVGKKGILDAVKTASGEASGKSVFQTHQTG 104
           LT  +V L+V   TTRKW I DA+  VGIKNVG KG  DA+K ASG+ASGK  F TH  G
Sbjct: 15  LTGSVVRLLVGCYTTRKWPIPDAENHVGIKNVGNKGFPDAIKNASGDASGKQSFPTHHEG 74

Query: 105 VGHAASGK 109
           VG+  SGK
Sbjct: 75  VGNNTSGK 82

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TTZ45.0e-64100.00NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A5A7TPY21.0e-1667.57Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3DCG29.0e-1376.79Trans-resveratrol di-O-methyltransferase-like OS=Cucumis melo var. makuwa OX=119... [more]
A0A5D3DHG61.9e-1065.00CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5A7USQ82.5e-1067.86NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
Match NameE-valueIdentityDescription
KAA0045596.14.51e-81100.00NBS-LRR type resistance protein [Cucumis melo var. makuwa][more]
KAA0043601.17.99e-2267.57hypothetical protein E6C27_scaffold320G00340 [Cucumis melo var. makuwa][more]
KAA0051560.12.23e-1776.79trans-resveratrol di-O-methyltransferase-like [Cucumis melo var. makuwa] >TYK212... [more]
KAA0031672.15.17e-1569.64hypothetical protein E6C27_scaffold139G004530 [Cucumis melo var. makuwa] >TYK044... [more]
TYK21926.14.81e-1460.29zinc finger protein ZPR1-like protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0001987.1IVF0001987.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032259 methylation
molecular_function GO:0008171 O-methyltransferase activity