Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGGTTATGCACTCTTCGAATAGGAATCCATTTTCTGAAAGATTCTGGCTTTCGTGCTTTGGTGGGTCTCCGAGATCCTTTCGATGACCTATGTTGTGTTGAAGGGATATCTATATGATCCGATTGATTGCGTAAAGCCCGCGGTAGCAACGGAACCGGGGAAAGTATACAGAAAAGACAGTTCTTTTCTATTCTATTAGTATTAGTATTAGATTAGTATTAGTTAGTGATCTCCGCTCAGTGAGTCCTTTCTTCCGTGATGAACTGTTGGCACCAGTCCTCCATTTTTTCTCTGTGGATCGAGGAGAAAGGGGGCTCGGTGGGAAGAGGATTGTAACATGAGAGAAGCAAGGAGGTCAACCTCTTTCAAATATACAACATGGATTCTGGCAATGCAATGTAGTTGGACTCTCATGTCGATCCGAATGAATCATCCTTTCCACGGAGGTAAATCTTTGCCTGCTAGGCAAGAGGATAGCAAGTTACAAATTCTGTCGCGGTAGGACATGTATTTCTATTACTATGAAATTCATAAATGAAGTAGTTAATGGTGGGGTTACCATTATCCTTTTTGCAATGACGAATCTTGTATGTGTTCCGAAGAAAAGTTGTTCATTTTTCGGGGTCTCGAAGGGGCGTGGAAACACATAAAAACTCTGGAATGGAAATGGAAAAGAGATCTAACTCCAGTTCCTTCGGAAATGGTAAGATCTTTGGCACAAGAAGAAGGGGTTGATCCATATCATCTTGACTGGGTTCTGATTTCTCTATTTTTTTAATAATACCGAGTTGGGTTCTTTTCCTACCCGTATCGAATAGAACATGCTGAGCCAAATCTTCTTCATGTAAAACCTGCTTTATTTAGATCGGGAAAATCGTACGGTTTTATGAAACCGTGTGCTATGGCTCGAATCCGTAGTCAATCCTATTTACGATAG
mRNA sequence
ATGCGGTTATGCACTCTTCGAATAGGAATCCATTTTCTGAAAGATTCTGGCTTTCGTGCTTTGGGATATCTATATGATCCGATTGATTGCGTAAAGCCCGCGGTAGCAACGGAACCGGGGAAATCCTCCATTTTTTCTCTGTGGATCGAGGAGAAAGGGGGCTCGGTGGGAAGAGGATTTTGGACTCTCATGTCGATCCGAATGAATCATCCTTTCCACGGAGGTAAATCTTTGCCTGCTAGGCAAGAGGATAGCAAGTTACAAATTCTGTCGCGAAAAGTTGTTCATTTTTCGGGGTCTCGAAGGGGCGTGGAAACACATAAAAACTCTGGAATGGAAATGGAAAAGAGATCTAACTCCAGTTCCTTCGGAAATGAACATGCTGAGCCAAATCTTCTTCATGTAAAACCTGCTTTATTTAGATCGGGAAAATCGTACGGTTTTATGAAACCGTGTGCTATGGCTCGAATCCGTAGTCAATCCTATTTACGATAG
Coding sequence (CDS)
ATGCGGTTATGCACTCTTCGAATAGGAATCCATTTTCTGAAAGATTCTGGCTTTCGTGCTTTGGGATATCTATATGATCCGATTGATTGCGTAAAGCCCGCGGTAGCAACGGAACCGGGGAAATCCTCCATTTTTTCTCTGTGGATCGAGGAGAAAGGGGGCTCGGTGGGAAGAGGATTTTGGACTCTCATGTCGATCCGAATGAATCATCCTTTCCACGGAGGTAAATCTTTGCCTGCTAGGCAAGAGGATAGCAAGTTACAAATTCTGTCGCGAAAAGTTGTTCATTTTTCGGGGTCTCGAAGGGGCGTGGAAACACATAAAAACTCTGGAATGGAAATGGAAAAGAGATCTAACTCCAGTTCCTTCGGAAATGAACATGCTGAGCCAAATCTTCTTCATGTAAAACCTGCTTTATTTAGATCGGGAAAATCGTACGGTTTTATGAAACCGTGTGCTATGGCTCGAATCCGTAGTCAATCCTATTTACGATAG
Protein sequence
MRLCTLRIGIHFLKDSGFRALGYLYDPIDCVKPAVATEPGKSSIFSLWIEEKGGSVGRGFWTLMSIRMNHPFHGGKSLPARQEDSKLQILSRKVVHFSGSRRGVETHKNSGMEMEKRSNSSSFGNEHAEPNLLHVKPALFRSGKSYGFMKPCAMARIRSQSYLR
Homology
BLAST of IVF0001649 vs. ExPASy TrEMBL
Match:
A0A0A0L231 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G628320 PE=4 SV=1)
HSP 1 Score: 328.6 bits (841), Expect = 1.5e-86
Identity = 158/160 (98.75%), Postives = 158/160 (98.75%), Query Frame = 0
Query: 1 MRLCTLRIGIHFLKDSGFRALGYLYDPIDCVKPAVATEPGKSSIFSLWIEEKGGSVGRGF 60
MRLCTLRIGIHFLKDSGFRALGYLYDPIDCVKPAVATEPGKSSIFSLWIEEKGGS GRGF
Sbjct: 1 MRLCTLRIGIHFLKDSGFRALGYLYDPIDCVKPAVATEPGKSSIFSLWIEEKGGSAGRGF 60
Query: 61 WTLMSIRMNHPFHGGKSLPARQEDSKLQILSRKVVHFSGSRRGVETHKNSGMEMEKRSNS 120
WTLMSIRMNHPFHGGKSLPARQEDSKLQILSRKVVHFSGSRRGVETHKNSGMEMEKR NS
Sbjct: 61 WTLMSIRMNHPFHGGKSLPARQEDSKLQILSRKVVHFSGSRRGVETHKNSGMEMEKRCNS 120
Query: 121 SSFGNEHAEPNLLHVKPALFRSGKSYGFMKPCAMARIRSQ 161
SSFGNEHAEPNLLHVKPALFRSGKSYGFMKPCAMARIRSQ
Sbjct: 121 SSFGNEHAEPNLLHVKPALFRSGKSYGFMKPCAMARIRSQ 160
BLAST of IVF0001649 vs. ExPASy TrEMBL
Match:
A0A2P5XUU9 (Uncharacterized protein ycf68 OS=Gossypium barbadense OX=3634 GN=GOBAR_AA13525 PE=3 SV=1)
HSP 1 Score: 91.7 bits (226), Expect = 3.1e-15
Identity = 55/122 (45.08%), Postives = 63/122 (51.64%), Query Frame = 0
Query: 1 MRLCTLRIGIHFLKDSGFRALGYLYDPIDCVKPAVATEPGKSSI---------------- 60
M LCTLRIGIHFLKD GFRALGYLYDPI CVK A+ TEPGKS I
Sbjct: 1 MWLCTLRIGIHFLKDPGFRALGYLYDPIGCVKLAITTEPGKSYIPFCLCGPRRKAAQQEG 60
Query: 61 --------------FSLWIEEKGGSVGRGFWTLMSIRMNHPFHGGKSLPARQEDSKLQIL 93
++ W+ E S W M IRMNH FHG +L + K +IL
Sbjct: 61 DCTMREARRSTSFKYTTWVLEMQRS-----WAFMRIRMNHLFHGVTNLVCVPKKRK-EIL 116
BLAST of IVF0001649 vs. ExPASy TrEMBL
Match:
A0A5N5IXQ9 (Uncharacterized protein ycf68 OS=Salix brachista OX=2182728 GN=DKX38_030151 PE=3 SV=1)
HSP 1 Score: 79.3 bits (194), Expect = 1.6e-11
Identity = 41/60 (68.33%), Postives = 43/60 (71.67%), Query Frame = 0
Query: 41 KSSIFSLWIEEKGGSVG--------RGFWTLMSIRMNHPFHGGKSLPARQEDSKLQILSR 93
+S I SLW EEK S + WTLMSIRMNHPFHGGKSLPARQEDSKLQILSR
Sbjct: 6 QSYILSLWTEEKSASFKYTTWILAIQWSWTLMSIRMNHPFHGGKSLPARQEDSKLQILSR 65
BLAST of IVF0001649 vs. ExPASy TrEMBL
Match:
W9R592 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_000755 PE=4 SV=1)
HSP 1 Score: 78.6 bits (192), Expect = 2.8e-11
Identity = 38/50 (76.00%), Postives = 41/50 (82.00%), Query Frame = 0
Query: 115 EKRSNSSSFGNEHAEPNLLHVKPALFRSGKSYGFMKPCAMARIRSQSYLR 165
+K S+ +S EPNLLHVKPALFRSGKSYGFMKPCAMARIRSQSY R
Sbjct: 104 KKASHQASNATSKPEPNLLHVKPALFRSGKSYGFMKPCAMARIRSQSYFR 153
BLAST of IVF0001649 vs. ExPASy TrEMBL
Match:
A0A6A5N1D4 (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00043441 PE=4 SV=1)
HSP 1 Score: 65.5 bits (158), Expect = 2.4e-07
Identity = 28/31 (90.32%), Postives = 30/31 (96.77%), Query Frame = 0
Query: 61 WTLMSIRMNHPFHGGKSLPARQEDSKLQILS 92
WTLMSIR+NHPFHGGKSLPARQEDSK +ILS
Sbjct: 49 WTLMSIRINHPFHGGKSLPARQEDSKFEILS 79
BLAST of IVF0001649 vs. NCBI nr
Match:
PPS07120.1 (hypothetical protein GOBAR_AA13525 [Gossypium barbadense])
HSP 1 Score: 90.9 bits (224), Expect = 6.29e-18
Identity = 59/136 (43.38%), Postives = 68/136 (50.00%), Query Frame = 0
Query: 1 MRLCTLRIGIHFLKDSGFRALGYLYDPIDCVKPAVATEPGKSSI---------------- 60
M LCTLRIGIHFLKD GFRALGYLYDPI CVK A+ TEPGKS I
Sbjct: 1 MWLCTLRIGIHFLKDPGFRALGYLYDPIGCVKLAITTEPGKSYIPFCLCGPRRKAAQQEG 60
Query: 61 --------------FSLWIEEKGGSVGRGFWTLMSIRMNHPFHGGKSLPARQEDSKLQIL 106
++ W+ E S W M IRMNH FHG +L + K +IL
Sbjct: 61 DCTMREARRSTSFKYTTWVLEMQRS-----WAFMRIRMNHLFHGVTNLVCVPKKRK-EIL 120
BLAST of IVF0001649 vs. NCBI nr
Match:
EXB56973.1 (hypothetical protein L484_000755 [Morus notabilis])
HSP 1 Score: 79.0 bits (193), Expect = 4.17e-15
Identity = 38/50 (76.00%), Postives = 41/50 (82.00%), Query Frame = 0
Query: 115 EKRSNSSSFGNEHAEPNLLHVKPALFRSGKSYGFMKPCAMARIRSQSYLR 164
+K S+ +S EPNLLHVKPALFRSGKSYGFMKPCAMARIRSQSY R
Sbjct: 104 KKASHQASNATSKPEPNLLHVKPALFRSGKSYGFMKPCAMARIRSQSYFR 153
BLAST of IVF0001649 vs. NCBI nr
Match:
KAB5511226.1 (hypothetical protein DKX38_030151 [Salix brachista])
HSP 1 Score: 78.6 bits (192), Expect = 2.10e-14
Identity = 41/60 (68.33%), Postives = 43/60 (71.67%), Query Frame = 0
Query: 41 KSSIFSLWIEEKGGSVG--------RGFWTLMSIRMNHPFHGGKSLPARQEDSKLQILSR 92
+S I SLW EEK S + WTLMSIRMNHPFHGGKSLPARQEDSKLQILSR
Sbjct: 6 QSYILSLWTEEKSASFKYTTWILAIQWSWTLMSIRMNHPFHGGKSLPARQEDSKLQILSR 65
BLAST of IVF0001649 vs. NCBI nr
Match:
RYR42393.1 (hypothetical protein Ahy_A08g038866 [Arachis hypogaea])
HSP 1 Score: 65.1 bits (157), Expect = 8.51e-11
Identity = 29/31 (93.55%), Postives = 30/31 (96.77%), Query Frame = 0
Query: 61 WTLMSIRMNHPFHGGKSLPARQEDSKLQILS 91
WTLMSIR N+PFHGGKSLPARQEDSKLQILS
Sbjct: 23 WTLMSIRTNYPFHGGKSLPARQEDSKLQILS 53
BLAST of IVF0001649 vs. NCBI nr
Match:
RYQ84274.1 (hypothetical protein Ahy_B10g103410 [Arachis hypogaea] >RYQ97004.1 hypothetical protein Ahy_B08g092965 [Arachis hypogaea])
HSP 1 Score: 65.1 bits (157), Expect = 8.51e-11
Identity = 29/31 (93.55%), Postives = 30/31 (96.77%), Query Frame = 0
Query: 61 WTLMSIRMNHPFHGGKSLPARQEDSKLQILS 91
WTLMSIR N+PFHGGKSLPARQEDSKLQILS
Sbjct: 23 WTLMSIRTNYPFHGGKSLPARQEDSKLQILS 53
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0L231 | 1.5e-86 | 98.75 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G628320 PE=4 SV=1 | [more] |
A0A2P5XUU9 | 3.1e-15 | 45.08 | Uncharacterized protein ycf68 OS=Gossypium barbadense OX=3634 GN=GOBAR_AA13525 P... | [more] |
A0A5N5IXQ9 | 1.6e-11 | 68.33 | Uncharacterized protein ycf68 OS=Salix brachista OX=2182728 GN=DKX38_030151 PE=3... | [more] |
W9R592 | 2.8e-11 | 76.00 | Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_000755 PE=4 SV=1 | [more] |
A0A6A5N1D4 | 2.4e-07 | 90.32 | Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00043441 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
PPS07120.1 | 6.29e-18 | 43.38 | hypothetical protein GOBAR_AA13525 [Gossypium barbadense] | [more] |
EXB56973.1 | 4.17e-15 | 76.00 | hypothetical protein L484_000755 [Morus notabilis] | [more] |
KAB5511226.1 | 2.10e-14 | 68.33 | hypothetical protein DKX38_030151 [Salix brachista] | [more] |
RYR42393.1 | 8.51e-11 | 93.55 | hypothetical protein Ahy_A08g038866 [Arachis hypogaea] | [more] |
RYQ84274.1 | 8.51e-11 | 93.55 | hypothetical protein Ahy_B10g103410 [Arachis hypogaea] >RYQ97004.1 hypothetical ... | [more] |
Match Name | E-value | Identity | Description | |