Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTAAAGGTTTGTTTAATGACGTTCTCGGTTTGTTTCCGTTTTCTATTTAACGGAAACAATTCCTATTTTTCTCTATTTCTCCTCCGCCGCTGTTCCGTCATTCACCCAGGTTTCTTCCTTCTCCCTCACAGCCGGTGGCGACCAACTACGGCCGCACCAACCCCACTCTGTTGTCGGTCGTCGGAGAACCCCTGTATCAATTTTCTTTCTCCTTCTCTTATTTCACTTTCTACTCTAACCTCACTCCTCAACCTGCCATTTGTCAATTTCCCTACTTTTCTCGTTTTTGCCCGTCTCCGATTCTCACTCTTTCTTCTTCGCCCCGTTCGCCTCGTCAAGGAATCATGTTTTGAATTCTTAAGCAGTTTCAACTGAATTTCTATTATTAACATGGCGAGGAAGAAGGGAAATACGAAGAGGGGATCGTCCAACCCCACATCCGGTCCTCAAAATTCCATCACTCTTAGACAGGAAGCTACTGGGAAAATCAAACCTAAAGTATCTAACAATGCCAAAGTTTATTTGAATCATTTAGAAAATTTAGCGACTTGGGCTAGTGGGCAACCCTCTTTACCTTCATTGGCTGCTTTCTTTGGACAACGTCTCGCTGCTGCAGCCGAGTCTTTGGCGGTTGCTCCTGACCCTTCTCTATTTCTCTGCGCGAGGTTCGTATGTCTTCTGCCCTCTACATTTGTTTAGCTTTGCATGCCTAGATTTGTTGTTTTTGTAGCGTTTGTAACAGGGTAAGTTCATGAATATTGGTTGTATTTGAGGATGGGAAGTTTTGTTGAGCTTTTCTGATTAGTTCTAAATGAATGATTTATAGCAGTATTGTGAAAGATTTTTGGGGCACTGTTATACACCGTAATCTAATTAGTCTTAAGTTAATGCAATGGCGGAATTCAACCGATGAACAATCAGATGACAAGGAAGAATCACTTGGATGAAGAATAAAGTGTTCAATGCTATTTTGAGACTACAGAAAAACAGATTAGTTGGTGCTGGAGATGAAAGAAGCTGGAATTTGTGTTGCTCTGGTGATCTCAGTCAAATCTTTGACTCTGCCTGATTGATTTCAGGAGAGCTCTAGAAAGGGAGCTTTCAAAGATAGTGACTAAAAGAACATGCCTCTGAAGATAAAAACGTTAAGAGTGATTAGCATGTCTAAATGGTTATTTGTTTGTTGAGAACGTTATAACAAACATCTACTATGGTGGTCTTGAATCTCTGTGCGTGTTGTTTTTTGCTTGGAAGAGTACTTTGGGATTTTTAGTTGCGTTGAAGGCTTGCTAACCCTTCTGCCATGTGGTAATCTCTGGAGGAAAAAGCCAGTAAGCTATGGAGTATGGCCAATTCAATGAAATCTTTTAGTTGGAGCCTGTGAGTTGGGAAGAAAAGGAAAGCCTTTAACAGCAAGGCTAAAAAATTATGGGTGAAGTGCATGAGTTAGTCAAGCCTCATTGTTCTTTATTTCATTAGATCGCGGGTTTAACCACTATATTTCCCTCGTAGTTAATACTAAGTAGGGTGGCTTTTGTTTGTTTTTTTTTTTTATGACAGTTTTCTTCTTTCTCCCTTGACTTCCAGGGAATTCATAATCAAATAATGTTTACATTTGCCTAAAAAAATGTTTACATGGGTCACATATCTCTTTTTTCTTTGCTAAAAATATCACATTACACATGGAGTCATAGGACAAGGCTGAGCATTACAGTATAAGTTAAAGATTCGTTTTCTATTTATGCTTATTGAATATTTTCTTATTGTTAAATTTTTACAATTACTTGGAAAAGAAAATCCGCTGGTGCTTTTTATTCAATACATGGTTGGAGTGGACACCTGATCCGAACCATCTAGCTGTTTCATGTTAAGGACTTTTATCGTGTCACATTTGAATGTTGTCTTGGAATCTAATCTTCTTTGGCTTTAAAACTAACCAATCTTATCCGCTTCGTTATATTACATTCAGGTGTGAAACAGTTCTCCAACCTGGTTCTAACTGCTACATACGAATAGAGAAAAATAATGCCAAGAAACGTCGAAGACACAAAAAAGCCAGTAATGTGACACAGAATGTAGTGGCGTATTATTGCCACTACTGCTCATGTAGGAACATAAAGAGAGGGACTCCCAAAGGCCATATGAAAGTGCTTTATGGCACAGAGTGTGTAAGCAAGGTAAAATCTGTGGTTGTCAAGGATGGTAAAGAATGTGAAAACAAGATTCTTACCGTGGATGCTCCTACAACTCCTCCTCTTACAACTGTAGACTGTCTAACTATCGATACTCCTGCAATTCCTTCTTTGTCAACAACTAGGGACGATGTAGCCGTTGATACTACTGCAGTTCCTCCAACTGAGGACATTTCTGTTGATGATGGCCCTGCTATTTCGTCTCCTAGAACAACTCCTGCAATTCCTTCCACCTCCAGCGTAACAAGTATGTCAAGATCGCAAGTTAGGGACATTCCTACTTTAGATGCTCCTGCCACTCCTCTCACCTTGACTGCAATGACTCTGTTGGATTCAAAGAGGAGAAAGAGGAAGAAACCGTCGTCTAAGAATCGAACTGAACCTGAAAGTTGTTCTGCTCCAACATCACATGGGGAAAAAAGCGAAGACACATCCAAAAGGAAGCGTAATAGAAAATCATGGACAAGTTTGAAGGAAATTGCTCAAAGGGAGGAGGAGAAAGGTAAACAAAACGTGGCTGGATTGGCAATCCCATTCTCCCTGTAAAAGACCAAATAACCAAATTGTTTTGTAGGCGTTTCTCCCAACAAGGAATTAATTTTATTTTACATCTTCCAGCATTTTATTTGTTTTTCAAATGGGATGATTTAAATTTGCCATGTTTGTTGAGAGTCGATCTTTAAATTGATGTAAAATTCTCAGGGAATCATACAAAATTGACAAGG
mRNA sequence
TTAAAGGTTTGTTTAATGACGTTCTCGGTTTGTTTCCGTTTTCTATTTAACGGAAACAATTCCTATTTTTCTCTATTTCTCCTCCGCCGCTGTTCCGTCATTCACCCAGGTTTCTTCCTTCTCCCTCACAGCCGGTGGCGACCAACTACGGCCGCACCAACCCCACTCTGTTGTCGGTCGTCGGAGAACCCCTGTATCAATTTTCTTTCTCCTTCTCTTATTTCACTTTCTACTCTAACCTCACTCCTCAACCTGCCATTTGTCAATTTCCCTACTTTTCTCGTTTTTGCCCGTCTCCGATTCTCACTCTTTCTTCTTCGCCCCGTTCGCCTCGTCAAGGAATCATGTTTTGAATTCTTAAGCAGTTTCAACTGAATTTCTATTATTAACATGGCGAGGAAGAAGGGAAATACGAAGAGGGGATCGTCCAACCCCACATCCGGTCCTCAAAATTCCATCACTCTTAGACAGGAAGCTACTGGGAAAATCAAACCTAAAGTATCTAACAATGCCAAAGTTTATTTGAATCATTTAGAAAATTTAGCGACTTGGGCTAGTGGGCAACCCTCTTTACCTTCATTGGCTGCTTTCTTTGGACAACGTCTCGCTGCTGCAGCCGAGTCTTTGGCGGTTGCTCCTGACCCTTCTCTATTTCTCTGCGCGAGGTGTGAAACAGTTCTCCAACCTGGTTCTAACTGCTACATACGAATAGAGAAAAATAATGCCAAGAAACGTCGAAGACACAAAAAAGCCAGTAATGTGACACAGAATGTAGTGGCGTATTATTGCCACTACTGCTCATGTAGGAACATAAAGAGAGGGACTCCCAAAGGCCATATGAAAGTGCTTTATGGCACAGAGTGTGTAAGCAAGGTAAAATCTGTGGTTGTCAAGGATGGTAAAGAATGTGAAAACAAGATTCTTACCGTGGATGCTCCTACAACTCCTCCTCTTACAACTGTAGACTGTCTAACTATCGATACTCCTGCAATTCCTTCTTTGTCAACAACTAGGGACGATGTAGCCGTTGATACTACTGCAGTTCCTCCAACTGAGGACATTTCTGTTGATGATGGCCCTGCTATTTCGTCTCCTAGAACAACTCCTGCAATTCCTTCCACCTCCAGCGTAACAAGTATGTCAAGATCGCAAGTTAGGGACATTCCTACTTTAGATGCTCCTGCCACTCCTCTCACCTTGACTGCAATGACTCTGTTGGATTCAAAGAGGAGAAAGAGGAAGAAACCGTCGTCTAAGAATCGAACTGAACCTGAAAGTTGTTCTGCTCCAACATCACATGGGGAAAAAAGCGAAGACACATCCAAAAGGAAGCGTAATAGAAAATCATGGACAAGTTTGAAGGAAATTGCTCAAAGGGAGGAGGAGAAAGGTAAACAAAACGTGGCTGGATTGGCAATCCCATTCTCCCTGTAAAAGACCAAATAACCAAATTGTTTTGTAGGCGTTTCTCCCAACAAGGAATTAATTTTATTTTACATCTTCCAGCATTTTATTTGTTTTTCAAATGGGATGATTTAAATTTGCCATGTTTGTTGAGAGTCGATCTTTAAATTGATGTAAAATTCTCAGGGAATCATACAAAATTGACAAGG
Coding sequence (CDS)
ATGGCGAGGAAGAAGGGAAATACGAAGAGGGGATCGTCCAACCCCACATCCGGTCCTCAAAATTCCATCACTCTTAGACAGGAAGCTACTGGGAAAATCAAACCTAAAGTATCTAACAATGCCAAAGTTTATTTGAATCATTTAGAAAATTTAGCGACTTGGGCTAGTGGGCAACCCTCTTTACCTTCATTGGCTGCTTTCTTTGGACAACGTCTCGCTGCTGCAGCCGAGTCTTTGGCGGTTGCTCCTGACCCTTCTCTATTTCTCTGCGCGAGGTGTGAAACAGTTCTCCAACCTGGTTCTAACTGCTACATACGAATAGAGAAAAATAATGCCAAGAAACGTCGAAGACACAAAAAAGCCAGTAATGTGACACAGAATGTAGTGGCGTATTATTGCCACTACTGCTCATGTAGGAACATAAAGAGAGGGACTCCCAAAGGCCATATGAAAGTGCTTTATGGCACAGAGTGTGTAAGCAAGGTAAAATCTGTGGTTGTCAAGGATGGTAAAGAATGTGAAAACAAGATTCTTACCGTGGATGCTCCTACAACTCCTCCTCTTACAACTGTAGACTGTCTAACTATCGATACTCCTGCAATTCCTTCTTTGTCAACAACTAGGGACGATGTAGCCGTTGATACTACTGCAGTTCCTCCAACTGAGGACATTTCTGTTGATGATGGCCCTGCTATTTCGTCTCCTAGAACAACTCCTGCAATTCCTTCCACCTCCAGCGTAACAAGTATGTCAAGATCGCAAGTTAGGGACATTCCTACTTTAGATGCTCCTGCCACTCCTCTCACCTTGACTGCAATGACTCTGTTGGATTCAAAGAGGAGAAAGAGGAAGAAACCGTCGTCTAAGAATCGAACTGAACCTGAAAGTTGTTCTGCTCCAACATCACATGGGGAAAAAAGCGAAGACACATCCAAAAGGAAGCGTAATAGAAAATCATGGACAAGTTTGAAGGAAATTGCTCAAAGGGAGGAGGAGAAAGGTAAACAAAACGTGGCTGGATTGGCAATCCCATTCTCCCTGTAA
Protein sequence
MARKKGNTKRGSSNPTSGPQNSITLRQEATGKIKPKVSNNAKVYLNHLENLATWASGQPSLPSLAAFFGQRLAAAAESLAVAPDPSLFLCARCETVLQPGSNCYIRIEKNNAKKRRRHKKASNVTQNVVAYYCHYCSCRNIKRGTPKGHMKVLYGTECVSKVKSVVVKDGKECENKILTVDAPTTPPLTTVDCLTIDTPAIPSLSTTRDDVAVDTTAVPPTEDISVDDGPAISSPRTTPAIPSTSSVTSMSRSQVRDIPTLDAPATPLTLTAMTLLDSKRRKRKKPSSKNRTEPESCSAPTSHGEKSEDTSKRKRNRKSWTSLKEIAQREEEKGKQNVAGLAIPFSL
Homology
BLAST of IVF0001341 vs. ExPASy TrEMBL
Match:
A0A5D3CYJ3 (Rpr2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004600 PE=4 SV=1)
HSP 1 Score: 661.8 bits (1706), Expect = 1.6e-186
Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 0
Query: 1 MARKKGNTKRGSSNPTSGPQNSITLRQEATGKIKPKVSNNAKVYLNHLENLATWASGQPS 60
MARKKGNTKRGSSNPTSGPQNSITLRQEATGKIKPKVSNNAKVYLNHLENLATWASGQPS
Sbjct: 1 MARKKGNTKRGSSNPTSGPQNSITLRQEATGKIKPKVSNNAKVYLNHLENLATWASGQPS 60
Query: 61 LPSLAAFFGQRLAAAAESLAVAPDPSLFLCARCETVLQPGSNCYIRIEKNNAKKRRRHKK 120
LPSLAAFFGQRLAAAAESLAVAPDPSLFLCARCETVLQPGSNCYIRIEKNNAKKRRRHKK
Sbjct: 61 LPSLAAFFGQRLAAAAESLAVAPDPSLFLCARCETVLQPGSNCYIRIEKNNAKKRRRHKK 120
Query: 121 ASNVTQNVVAYYCHYCSCRNIKRGTPKGHMKVLYGTECVSKVKSVVVKDGKECENKILTV 180
ASNVTQNVVAYYCHYCSCRNIKRGTPKGHMKVLYGTECVSKVKSVVVKDGKECENKILTV
Sbjct: 121 ASNVTQNVVAYYCHYCSCRNIKRGTPKGHMKVLYGTECVSKVKSVVVKDGKECENKILTV 180
Query: 181 DAPTTPPLTTVDCLTIDTPAIPSLSTTRDDVAVDTTAVPPTEDISVDDGPAISSPRTTPA 240
DAPTTPPLTTVDCLTIDTPAIPSLSTTRDDVAVDTTAVPPTEDISVDDGPAISSPRTTPA
Sbjct: 181 DAPTTPPLTTVDCLTIDTPAIPSLSTTRDDVAVDTTAVPPTEDISVDDGPAISSPRTTPA 240
Query: 241 IPSTSSVTSMSRSQVRDIPTLDAPATPLTLTAMTLLDSKRRKRKKPSSKNRTEPESCSAP 300
IPSTSSVTSMSRSQVRDIPTLDAPATPLTLTAMTLLDSKRRKRKKPSSKNRTEPESCSAP
Sbjct: 241 IPSTSSVTSMSRSQVRDIPTLDAPATPLTLTAMTLLDSKRRKRKKPSSKNRTEPESCSAP 300
Query: 301 TSHGEKSEDTSKRKRNRKSWTSLKEIAQREEEKGKQNVAGLAIPFSL 348
TSHGEKSEDTSKRKRNRKSWTSLKEIAQREEEKGKQNVAGLAIPFSL
Sbjct: 301 TSHGEKSEDTSKRKRNRKSWTSLKEIAQREEEKGKQNVAGLAIPFSL 347
BLAST of IVF0001341 vs. ExPASy TrEMBL
Match:
A0A1S3BU13 (uncharacterized protein LOC103493157 OS=Cucumis melo OX=3656 GN=LOC103493157 PE=4 SV=1)
HSP 1 Score: 661.8 bits (1706), Expect = 1.6e-186
Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 0
Query: 1 MARKKGNTKRGSSNPTSGPQNSITLRQEATGKIKPKVSNNAKVYLNHLENLATWASGQPS 60
MARKKGNTKRGSSNPTSGPQNSITLRQEATGKIKPKVSNNAKVYLNHLENLATWASGQPS
Sbjct: 1 MARKKGNTKRGSSNPTSGPQNSITLRQEATGKIKPKVSNNAKVYLNHLENLATWASGQPS 60
Query: 61 LPSLAAFFGQRLAAAAESLAVAPDPSLFLCARCETVLQPGSNCYIRIEKNNAKKRRRHKK 120
LPSLAAFFGQRLAAAAESLAVAPDPSLFLCARCETVLQPGSNCYIRIEKNNAKKRRRHKK
Sbjct: 61 LPSLAAFFGQRLAAAAESLAVAPDPSLFLCARCETVLQPGSNCYIRIEKNNAKKRRRHKK 120
Query: 121 ASNVTQNVVAYYCHYCSCRNIKRGTPKGHMKVLYGTECVSKVKSVVVKDGKECENKILTV 180
ASNVTQNVVAYYCHYCSCRNIKRGTPKGHMKVLYGTECVSKVKSVVVKDGKECENKILTV
Sbjct: 121 ASNVTQNVVAYYCHYCSCRNIKRGTPKGHMKVLYGTECVSKVKSVVVKDGKECENKILTV 180
Query: 181 DAPTTPPLTTVDCLTIDTPAIPSLSTTRDDVAVDTTAVPPTEDISVDDGPAISSPRTTPA 240
DAPTTPPLTTVDCLTIDTPAIPSLSTTRDDVAVDTTAVPPTEDISVDDGPAISSPRTTPA
Sbjct: 181 DAPTTPPLTTVDCLTIDTPAIPSLSTTRDDVAVDTTAVPPTEDISVDDGPAISSPRTTPA 240
Query: 241 IPSTSSVTSMSRSQVRDIPTLDAPATPLTLTAMTLLDSKRRKRKKPSSKNRTEPESCSAP 300
IPSTSSVTSMSRSQVRDIPTLDAPATPLTLTAMTLLDSKRRKRKKPSSKNRTEPESCSAP
Sbjct: 241 IPSTSSVTSMSRSQVRDIPTLDAPATPLTLTAMTLLDSKRRKRKKPSSKNRTEPESCSAP 300
Query: 301 TSHGEKSEDTSKRKRNRKSWTSLKEIAQREEEKGKQNVAGLAIPFSL 348
TSHGEKSEDTSKRKRNRKSWTSLKEIAQREEEKGKQNVAGLAIPFSL
Sbjct: 301 TSHGEKSEDTSKRKRNRKSWTSLKEIAQREEEKGKQNVAGLAIPFSL 347
BLAST of IVF0001341 vs. ExPASy TrEMBL
Match:
A0A5A7TNC0 (Rpr2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G001240 PE=4 SV=1)
HSP 1 Score: 657.9 bits (1696), Expect = 2.3e-185
Identity = 345/347 (99.42%), Postives = 346/347 (99.71%), Query Frame = 0
Query: 1 MARKKGNTKRGSSNPTSGPQNSITLRQEATGKIKPKVSNNAKVYLNHLENLATWASGQPS 60
MARKKGNTKRGSSNPTSGPQNSITLRQEATGKIKPKVSNNAKVYLNHLENLATWASGQPS
Sbjct: 1 MARKKGNTKRGSSNPTSGPQNSITLRQEATGKIKPKVSNNAKVYLNHLENLATWASGQPS 60
Query: 61 LPSLAAFFGQRLAAAAESLAVAPDPSLFLCARCETVLQPGSNCYIRIEKNNAKKRRRHKK 120
LPSLAAFFGQRLAAAAESLAVAPDPSLFLCARCETVLQPGSNCYIRIEKNNAKKR RHKK
Sbjct: 61 LPSLAAFFGQRLAAAAESLAVAPDPSLFLCARCETVLQPGSNCYIRIEKNNAKKRGRHKK 120
Query: 121 ASNVTQNVVAYYCHYCSCRNIKRGTPKGHMKVLYGTECVSKVKSVVVKDGKECENKILTV 180
ASNVTQNVVAYYCHYCSCRNIKRGTPKGHMKVLYGTECVSKVKSVVVKDGKECENKILT+
Sbjct: 121 ASNVTQNVVAYYCHYCSCRNIKRGTPKGHMKVLYGTECVSKVKSVVVKDGKECENKILTM 180
Query: 181 DAPTTPPLTTVDCLTIDTPAIPSLSTTRDDVAVDTTAVPPTEDISVDDGPAISSPRTTPA 240
DAPTTPPLTTVDCLTIDTPAIPSLSTTRDDVAVDTTAVPPTEDISVDDGPAISSPRTTPA
Sbjct: 181 DAPTTPPLTTVDCLTIDTPAIPSLSTTRDDVAVDTTAVPPTEDISVDDGPAISSPRTTPA 240
Query: 241 IPSTSSVTSMSRSQVRDIPTLDAPATPLTLTAMTLLDSKRRKRKKPSSKNRTEPESCSAP 300
IPSTSSVTSMSRSQVRDIPTLDAPATPLTLTAMTLLDSKRRKRKKPSSKNRTEPESCSAP
Sbjct: 241 IPSTSSVTSMSRSQVRDIPTLDAPATPLTLTAMTLLDSKRRKRKKPSSKNRTEPESCSAP 300
Query: 301 TSHGEKSEDTSKRKRNRKSWTSLKEIAQREEEKGKQNVAGLAIPFSL 348
TSHGEKSEDTSKRKRNRKSWTSLKEIAQREEEKGKQNVAGLAIPFSL
Sbjct: 301 TSHGEKSEDTSKRKRNRKSWTSLKEIAQREEEKGKQNVAGLAIPFSL 347
BLAST of IVF0001341 vs. ExPASy TrEMBL
Match:
A0A0A0KUP1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G048010 PE=4 SV=1)
HSP 1 Score: 601.7 bits (1550), Expect = 2.0e-168
Identity = 315/347 (90.78%), Postives = 326/347 (93.95%), Query Frame = 0
Query: 1 MARKKGNTKRGSSNPTSGPQNSITLRQEATGKIKPKVSNNAKVYLNHLENLATWASGQPS 60
MARKK NT RGSSNP GPQNSITLRQEATGKIKPKVSNNAKVYLNHLENLATWASGQPS
Sbjct: 1 MARKKSNTNRGSSNPGFGPQNSITLRQEATGKIKPKVSNNAKVYLNHLENLATWASGQPS 60
Query: 61 LPSLAAFFGQRLAAAAESLAVAPDPSLFLCARCETVLQPGSNCYIRIEKNNAKKRRRHKK 120
LPSLAAFFGQRLAAAAESLAV+PDPSLFLCARCET+LQPGSNC IRIEKN AKKRRRHKK
Sbjct: 61 LPSLAAFFGQRLAAAAESLAVSPDPSLFLCARCETILQPGSNCNIRIEKNTAKKRRRHKK 120
Query: 121 ASNVTQNVVAYYCHYCSCRNIKRGTPKGHMKVLYGTECVSKVKSVVVKDGKECENKILTV 180
SN+TQNVVAYYCHYCSCRNIKRGTPKGHMKVLYGTECVSKVKSVVVKDGKECENKI T+
Sbjct: 121 GSNLTQNVVAYYCHYCSCRNIKRGTPKGHMKVLYGTECVSKVKSVVVKDGKECENKIFTM 180
Query: 181 DAPTTPPLTTVDCLTIDTPAIPSLSTTRDDVAVDTTAVPPTEDISVDDGPAISSPRTTPA 240
D P PPLTTVDCLTIDTPAIPSLSTTRDD+ +DT+A+ PT DISV DGPAISSPRTTPA
Sbjct: 181 DTPKIPPLTTVDCLTIDTPAIPSLSTTRDDLTIDTSAISPTGDISVVDGPAISSPRTTPA 240
Query: 241 IPSTSSVTSMSRSQVRDIPTLDAPATPLTLTAMTLLDSKRRKRKKPSSKNRTEPESCSAP 300
I ST SVTS+SRSQVRDIPTLDAPATPLTLT MTLLDSKRRKRKKPSSKN+TEPESCS P
Sbjct: 241 ISSTLSVTSISRSQVRDIPTLDAPATPLTLTGMTLLDSKRRKRKKPSSKNQTEPESCSGP 300
Query: 301 TSHGEKSEDTSKRKRNRKSWTSLKEIAQREEEKGKQNVAGLAIPFSL 348
TSHGE SE TSKRKRNRKSWTSLKEIAQREEE+GKQNVAGLAIPFSL
Sbjct: 301 TSHGETSEGTSKRKRNRKSWTSLKEIAQREEERGKQNVAGLAIPFSL 347
BLAST of IVF0001341 vs. ExPASy TrEMBL
Match:
A0A6J1J5I6 (uncharacterized protein LOC111482797 OS=Cucurbita maxima OX=3661 GN=LOC111482797 PE=4 SV=1)
HSP 1 Score: 411.0 bits (1055), Expect = 5.0e-111
Identity = 236/377 (62.60%), Postives = 270/377 (71.62%), Query Frame = 0
Query: 1 MARKKGNTKRGSSNPTSGPQNSITLRQEATGKIKPKVSNNAKVYLNHLENLATWASGQPS 60
MA++KGNTK+G+SNPTSGPQ+SIT+RQE TGK KPKVSNN K YLNHLENLATWASG+ S
Sbjct: 1 MAKRKGNTKKGASNPTSGPQDSITIRQEITGKFKPKVSNNVKTYLNHLENLATWASGKAS 60
Query: 61 LPSLAAFFGQRLAAAAESLAVAPDPSLFLCARCETVLQPGSNCYIRIEKNNAKKRRRHKK 120
+PSLAAFFGQRLA AAESLAVAPD SLF C RCET+LQPGSNC IRIEKNNAK+RRR KK
Sbjct: 61 IPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKNNAKRRRRQKK 120
Query: 121 ASNVTQNVVAYYCHYCSCRNIKRGTPKGHMKVLYGTECVSKVKSVVVKDGKECENKILTV 180
SN QN VAYYCH+CSCRNIKRGTPKGHMKVLY +VK V VKDGKECE V
Sbjct: 121 CSNSRQNNVAYYCHHCSCRNIKRGTPKGHMKVLYDAAFERRVKPVDVKDGKECETS--AV 180
Query: 181 DAPTTPPLTTVDCLTIDTPAIPSLSTTRDDVAVDTTAVPPTEDISVDDGPAISSPR---- 240
+ PT + LTID P IP D +A+PPT DI+ D PAI
Sbjct: 181 ERPT-------EILTIDAPKIP-----------DASAIPPTGDITALDNPAIQLQTKGIL 240
Query: 241 --TTPAIPSTSSVTSMSRSQVRD-----------------------IPTLDAPATPLTLT 300
+PA PST SVT++ +SQ R+ +PT+DAPATP T T
Sbjct: 241 NINSPATPSTLSVTTLLKSQKREMTTLSEKHIGHDIRTDEEKKTGAVPTVDAPATPSTST 300
Query: 301 AMTLLDSKRRKRKKPSSKNRTEPESCSAPTSHGEKSEDTSKRKRNRKSWTSLKEIAQREE 348
+TLLDSK+RKR KPSSKN+TEP SCSAPT+ G++SE TSKR R RKSWTSLKE+A+ E
Sbjct: 301 GVTLLDSKKRKRNKPSSKNQTEPRSCSAPTADGDRSEGTSKRNRKRKSWTSLKEVARTNE 357
BLAST of IVF0001341 vs. NCBI nr
Match:
XP_008452026.1 (PREDICTED: uncharacterized protein LOC103493157 [Cucumis melo] >TYK16632.1 Rpr2 domain-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 657 bits (1695), Expect = 2.30e-237
Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 0
Query: 1 MARKKGNTKRGSSNPTSGPQNSITLRQEATGKIKPKVSNNAKVYLNHLENLATWASGQPS 60
MARKKGNTKRGSSNPTSGPQNSITLRQEATGKIKPKVSNNAKVYLNHLENLATWASGQPS
Sbjct: 1 MARKKGNTKRGSSNPTSGPQNSITLRQEATGKIKPKVSNNAKVYLNHLENLATWASGQPS 60
Query: 61 LPSLAAFFGQRLAAAAESLAVAPDPSLFLCARCETVLQPGSNCYIRIEKNNAKKRRRHKK 120
LPSLAAFFGQRLAAAAESLAVAPDPSLFLCARCETVLQPGSNCYIRIEKNNAKKRRRHKK
Sbjct: 61 LPSLAAFFGQRLAAAAESLAVAPDPSLFLCARCETVLQPGSNCYIRIEKNNAKKRRRHKK 120
Query: 121 ASNVTQNVVAYYCHYCSCRNIKRGTPKGHMKVLYGTECVSKVKSVVVKDGKECENKILTV 180
ASNVTQNVVAYYCHYCSCRNIKRGTPKGHMKVLYGTECVSKVKSVVVKDGKECENKILTV
Sbjct: 121 ASNVTQNVVAYYCHYCSCRNIKRGTPKGHMKVLYGTECVSKVKSVVVKDGKECENKILTV 180
Query: 181 DAPTTPPLTTVDCLTIDTPAIPSLSTTRDDVAVDTTAVPPTEDISVDDGPAISSPRTTPA 240
DAPTTPPLTTVDCLTIDTPAIPSLSTTRDDVAVDTTAVPPTEDISVDDGPAISSPRTTPA
Sbjct: 181 DAPTTPPLTTVDCLTIDTPAIPSLSTTRDDVAVDTTAVPPTEDISVDDGPAISSPRTTPA 240
Query: 241 IPSTSSVTSMSRSQVRDIPTLDAPATPLTLTAMTLLDSKRRKRKKPSSKNRTEPESCSAP 300
IPSTSSVTSMSRSQVRDIPTLDAPATPLTLTAMTLLDSKRRKRKKPSSKNRTEPESCSAP
Sbjct: 241 IPSTSSVTSMSRSQVRDIPTLDAPATPLTLTAMTLLDSKRRKRKKPSSKNRTEPESCSAP 300
Query: 301 TSHGEKSEDTSKRKRNRKSWTSLKEIAQREEEKGKQNVAGLAIPFSL 347
TSHGEKSEDTSKRKRNRKSWTSLKEIAQREEEKGKQNVAGLAIPFSL
Sbjct: 301 TSHGEKSEDTSKRKRNRKSWTSLKEIAQREEEKGKQNVAGLAIPFSL 347
BLAST of IVF0001341 vs. NCBI nr
Match:
KAA0044832.1 (Rpr2 domain-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 653 bits (1685), Expect = 7.69e-236
Identity = 345/347 (99.42%), Postives = 346/347 (99.71%), Query Frame = 0
Query: 1 MARKKGNTKRGSSNPTSGPQNSITLRQEATGKIKPKVSNNAKVYLNHLENLATWASGQPS 60
MARKKGNTKRGSSNPTSGPQNSITLRQEATGKIKPKVSNNAKVYLNHLENLATWASGQPS
Sbjct: 1 MARKKGNTKRGSSNPTSGPQNSITLRQEATGKIKPKVSNNAKVYLNHLENLATWASGQPS 60
Query: 61 LPSLAAFFGQRLAAAAESLAVAPDPSLFLCARCETVLQPGSNCYIRIEKNNAKKRRRHKK 120
LPSLAAFFGQRLAAAAESLAVAPDPSLFLCARCETVLQPGSNCYIRIEKNNAKKR RHKK
Sbjct: 61 LPSLAAFFGQRLAAAAESLAVAPDPSLFLCARCETVLQPGSNCYIRIEKNNAKKRGRHKK 120
Query: 121 ASNVTQNVVAYYCHYCSCRNIKRGTPKGHMKVLYGTECVSKVKSVVVKDGKECENKILTV 180
ASNVTQNVVAYYCHYCSCRNIKRGTPKGHMKVLYGTECVSKVKSVVVKDGKECENKILT+
Sbjct: 121 ASNVTQNVVAYYCHYCSCRNIKRGTPKGHMKVLYGTECVSKVKSVVVKDGKECENKILTM 180
Query: 181 DAPTTPPLTTVDCLTIDTPAIPSLSTTRDDVAVDTTAVPPTEDISVDDGPAISSPRTTPA 240
DAPTTPPLTTVDCLTIDTPAIPSLSTTRDDVAVDTTAVPPTEDISVDDGPAISSPRTTPA
Sbjct: 181 DAPTTPPLTTVDCLTIDTPAIPSLSTTRDDVAVDTTAVPPTEDISVDDGPAISSPRTTPA 240
Query: 241 IPSTSSVTSMSRSQVRDIPTLDAPATPLTLTAMTLLDSKRRKRKKPSSKNRTEPESCSAP 300
IPSTSSVTSMSRSQVRDIPTLDAPATPLTLTAMTLLDSKRRKRKKPSSKNRTEPESCSAP
Sbjct: 241 IPSTSSVTSMSRSQVRDIPTLDAPATPLTLTAMTLLDSKRRKRKKPSSKNRTEPESCSAP 300
Query: 301 TSHGEKSEDTSKRKRNRKSWTSLKEIAQREEEKGKQNVAGLAIPFSL 347
TSHGEKSEDTSKRKRNRKSWTSLKEIAQREEEKGKQNVAGLAIPFSL
Sbjct: 301 TSHGEKSEDTSKRKRNRKSWTSLKEIAQREEEKGKQNVAGLAIPFSL 347
BLAST of IVF0001341 vs. NCBI nr
Match:
XP_004146565.1 (uncharacterized protein LOC101220608 [Cucumis sativus] >KGN53340.1 hypothetical protein Csa_014704 [Cucumis sativus])
HSP 1 Score: 597 bits (1539), Expect = 1.52e-213
Identity = 315/347 (90.78%), Postives = 326/347 (93.95%), Query Frame = 0
Query: 1 MARKKGNTKRGSSNPTSGPQNSITLRQEATGKIKPKVSNNAKVYLNHLENLATWASGQPS 60
MARKK NT RGSSNP GPQNSITLRQEATGKIKPKVSNNAKVYLNHLENLATWASGQPS
Sbjct: 1 MARKKSNTNRGSSNPGFGPQNSITLRQEATGKIKPKVSNNAKVYLNHLENLATWASGQPS 60
Query: 61 LPSLAAFFGQRLAAAAESLAVAPDPSLFLCARCETVLQPGSNCYIRIEKNNAKKRRRHKK 120
LPSLAAFFGQRLAAAAESLAV+PDPSLFLCARCET+LQPGSNC IRIEKN AKKRRRHKK
Sbjct: 61 LPSLAAFFGQRLAAAAESLAVSPDPSLFLCARCETILQPGSNCNIRIEKNTAKKRRRHKK 120
Query: 121 ASNVTQNVVAYYCHYCSCRNIKRGTPKGHMKVLYGTECVSKVKSVVVKDGKECENKILTV 180
SN+TQNVVAYYCHYCSCRNIKRGTPKGHMKVLYGTECVSKVKSVVVKDGKECENKI T+
Sbjct: 121 GSNLTQNVVAYYCHYCSCRNIKRGTPKGHMKVLYGTECVSKVKSVVVKDGKECENKIFTM 180
Query: 181 DAPTTPPLTTVDCLTIDTPAIPSLSTTRDDVAVDTTAVPPTEDISVDDGPAISSPRTTPA 240
D P PPLTTVDCLTIDTPAIPSLSTTRDD+ +DT+A+ PT DISV DGPAISSPRTTPA
Sbjct: 181 DTPKIPPLTTVDCLTIDTPAIPSLSTTRDDLTIDTSAISPTGDISVVDGPAISSPRTTPA 240
Query: 241 IPSTSSVTSMSRSQVRDIPTLDAPATPLTLTAMTLLDSKRRKRKKPSSKNRTEPESCSAP 300
I ST SVTS+SRSQVRDIPTLDAPATPLTLT MTLLDSKRRKRKKPSSKN+TEPESCS P
Sbjct: 241 ISSTLSVTSISRSQVRDIPTLDAPATPLTLTGMTLLDSKRRKRKKPSSKNQTEPESCSGP 300
Query: 301 TSHGEKSEDTSKRKRNRKSWTSLKEIAQREEEKGKQNVAGLAIPFSL 347
TSHGE SE TSKRKRNRKSWTSLKEIAQREEE+GKQNVAGLAIPFSL
Sbjct: 301 TSHGETSEGTSKRKRNRKSWTSLKEIAQREEERGKQNVAGLAIPFSL 347
BLAST of IVF0001341 vs. NCBI nr
Match:
XP_038906436.1 (uncharacterized protein LOC120092350 isoform X1 [Benincasa hispida])
HSP 1 Score: 484 bits (1246), Expect = 9.35e-169
Identity = 275/372 (73.92%), Postives = 301/372 (80.91%), Query Frame = 0
Query: 1 MARKKGNTKRGSSNPTSGPQNSITLRQEATGKIKPKVSNNAKVYLNHLENLATWASGQPS 60
MA+KKGN K+GSSNPTSGPQ+SITLRQE TGKIKPKVSNN KVYLNHLENLATWA GQPS
Sbjct: 1 MAKKKGNAKKGSSNPTSGPQDSITLRQEITGKIKPKVSNNVKVYLNHLENLATWACGQPS 60
Query: 61 LPSLAAFFGQRLAAAAESLAVAPDPSLFLCARCETVLQPGSNCYIRIEKNNAKKRRRHKK 120
+PSLA FFGQRLAAAAESLAVAPD SLFLC RCET+LQPGSNC IRIEKNNAK+RR+H K
Sbjct: 61 IPSLATFFGQRLAAAAESLAVAPDASLFLCQRCETILQPGSNCSIRIEKNNAKRRRKHNK 120
Query: 121 ASNVTQNVVAYYCHYCSCRNIKRGTPKGHMKVLYGTECVSKVKSVVVKDGKECENKILTV 180
SN+TQNVVAYYCHYCSCRNIKRGTPKGHMKVLYGTE VSK+KSV V+DGKECENKI
Sbjct: 121 CSNLTQNVVAYYCHYCSCRNIKRGTPKGHMKVLYGTEFVSKLKSVGVEDGKECENKIS-- 180
Query: 181 DAPTTPPLTTVDCLTIDTPAIPSLSTTRDDVAVDTTAVPPTEDISVDDGPAISSPRT--- 240
PL T + LTIDTPAIP STT +D +DT A+PPT DISV DGP SSPRT
Sbjct: 181 ------PLPTGNRLTIDTPAIPP-STTGEDQNIDTRAIPPTGDISVVDGPVFSSPRTKDI 240
Query: 241 ----TPAIPSTSSVTSMSRSQ------------------VRDIPTLDAPATPLTLTAMTL 300
PA PST SV ++SRSQ V DIPT+DAPATP T+T +TL
Sbjct: 241 LNINAPATPSTLSVQTLSRSQKMKLLSNKQTGPASVEERVGDIPTVDAPATPPTMTGITL 300
Query: 301 LDSKRRKRKKPSSKNRTEPESCSAPTSHGEKSEDTSKRKRNRKSWTSLKEIAQREEEKGK 347
LDSKRRKRKKPSSKN+TEPES SAPT++G+K+ SKRKRNRKSWTSLKEIAQR+EE+GK
Sbjct: 301 LDSKRRKRKKPSSKNQTEPES-SAPTTYGDKTVGMSKRKRNRKSWTSLKEIAQRDEERGK 360
BLAST of IVF0001341 vs. NCBI nr
Match:
XP_022984531.1 (uncharacterized protein LOC111482797 [Cucurbita maxima])
HSP 1 Score: 407 bits (1045), Expect = 2.84e-138
Identity = 236/377 (62.60%), Postives = 270/377 (71.62%), Query Frame = 0
Query: 1 MARKKGNTKRGSSNPTSGPQNSITLRQEATGKIKPKVSNNAKVYLNHLENLATWASGQPS 60
MA++KGNTK+G+SNPTSGPQ+SIT+RQE TGK KPKVSNN K YLNHLENLATWASG+ S
Sbjct: 1 MAKRKGNTKKGASNPTSGPQDSITIRQEITGKFKPKVSNNVKTYLNHLENLATWASGKAS 60
Query: 61 LPSLAAFFGQRLAAAAESLAVAPDPSLFLCARCETVLQPGSNCYIRIEKNNAKKRRRHKK 120
+PSLAAFFGQRLA AAESLAVAPD SLF C RCET+LQPGSNC IRIEKNNAK+RRR KK
Sbjct: 61 IPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKNNAKRRRRQKK 120
Query: 121 ASNVTQNVVAYYCHYCSCRNIKRGTPKGHMKVLYGTECVSKVKSVVVKDGKECENKILTV 180
SN QN VAYYCH+CSCRNIKRGTPKGHMKVLY +VK V VKDGKECE V
Sbjct: 121 CSNSRQNNVAYYCHHCSCRNIKRGTPKGHMKVLYDAAFERRVKPVDVKDGKECETSA--V 180
Query: 181 DAPTTPPLTTVDCLTIDTPAIPSLSTTRDDVAVDTTAVPPTEDISVDDGPAISSPR---- 240
+ PT + LTID P IP D +A+PPT DI+ D PAI
Sbjct: 181 ERPT-------EILTIDAPKIP-----------DASAIPPTGDITALDNPAIQLQTKGIL 240
Query: 241 --TTPAIPSTSSVTSMSRSQVRD-----------------------IPTLDAPATPLTLT 300
+PA PST SVT++ +SQ R+ +PT+DAPATP T T
Sbjct: 241 NINSPATPSTLSVTTLLKSQKREMTTLSEKHIGHDIRTDEEKKTGAVPTVDAPATPSTST 300
Query: 301 AMTLLDSKRRKRKKPSSKNRTEPESCSAPTSHGEKSEDTSKRKRNRKSWTSLKEIAQREE 347
+TLLDSK+RKR KPSSKN+TEP SCSAPT+ G++SE TSKR R RKSWTSLKE+A+ E
Sbjct: 301 GVTLLDSKKRKRNKPSSKNQTEPRSCSAPTADGDRSEGTSKRNRKRKSWTSLKEVARTNE 357
BLAST of IVF0001341 vs. TAIR 10
Match:
AT5G41270.1 (CONTAINS InterPro DOMAIN/s: RNAse P, Rpr2/Rpp21 subunit (InterPro:IPR007175); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )
HSP 1 Score: 110.9 bits (276), Expect = 2.0e-24
Identity = 115/354 (32.49%), Postives = 152/354 (42.94%), Query Frame = 0
Query: 4 KKGNTKRGSSNPTSGPQNSITLRQEATGKIKPKVSNNAKVYLNHLENLATWAS-GQPSLP 63
K+G K ++ GP LR E HL+NLA W+S G +P
Sbjct: 3 KRGPKKLTNTQGGGGPNLKSVLRHE------------------HLKNLALWSSTGDTPIP 62
Query: 64 SLAAFFGQRLAAAAESLAVAPDPSLFLCARCETVLQPGSNCYIRIEK---NNAKKRRRHK 123
SLA+ G+RLAA ES + DP L C RCET+L+PG NC +RIEK N KKR R K
Sbjct: 63 SLASLLGRRLAADTESTGITTDPDLVSCQRCETILKPGFNCNVRIEKVSANVKKKRNRCK 122
Query: 124 KASNV--TQNVVAYYCHYCSCRNIKRGTPKGHMKVLYGTECVSKVKSVVVKDGKECENKI 183
K++N+ QN V Y+C++CS RN+KRGT KG MK LY
Sbjct: 123 KSNNICFPQNNVVYHCNFCSHRNLKRGTAKGQMKELY----------------------- 182
Query: 184 LTVDAPTTPPLTTVDCLTIDTPAIPSLSTTRDDVAVDTTAVPPTEDISVDDGPAISSPRT 243
P P T R P I T
Sbjct: 183 -----PFKP------------------KTAR------------------SSRPKIKKEMT 242
Query: 244 TPAIPSTSSVTSMSRS---QVRDIPTLDAPATPLTLTAMTLLDSKRRKRKKPSSKNRTEP 303
P ++ ++S RS QV + D P P+ LT + R+ +KP SK +EP
Sbjct: 243 MPQEIQSNMLSSPERSVKDQVEEKSVGDTP-KPMMLTL-----ERDRRIRKPKSKKPSEP 258
Query: 304 ESCSAPTSHGEKSEDTSKRKRNRKSWTSLKEIAQREEEKGKQNVAG-LAIPFSL 348
+S EK+ S +++ + WTS+KEIA E K + AG IPF L
Sbjct: 303 QSVP------EKTVGGSNKRKRKSPWTSMKEIA----ETNKSSKAGNFKIPFLL 258
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3CYJ3 | 1.6e-186 | 100.00 | Rpr2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... | [more] |
A0A1S3BU13 | 1.6e-186 | 100.00 | uncharacterized protein LOC103493157 OS=Cucumis melo OX=3656 GN=LOC103493157 PE=... | [more] |
A0A5A7TNC0 | 2.3e-185 | 99.42 | Rpr2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... | [more] |
A0A0A0KUP1 | 2.0e-168 | 90.78 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G048010 PE=4 SV=1 | [more] |
A0A6J1J5I6 | 5.0e-111 | 62.60 | uncharacterized protein LOC111482797 OS=Cucurbita maxima OX=3661 GN=LOC111482797... | [more] |
Match Name | E-value | Identity | Description | |
XP_008452026.1 | 2.30e-237 | 100.00 | PREDICTED: uncharacterized protein LOC103493157 [Cucumis melo] >TYK16632.1 Rpr2 ... | [more] |
KAA0044832.1 | 7.69e-236 | 99.42 | Rpr2 domain-containing protein [Cucumis melo var. makuwa] | [more] |
XP_004146565.1 | 1.52e-213 | 90.78 | uncharacterized protein LOC101220608 [Cucumis sativus] >KGN53340.1 hypothetical ... | [more] |
XP_038906436.1 | 9.35e-169 | 73.92 | uncharacterized protein LOC120092350 isoform X1 [Benincasa hispida] | [more] |
XP_022984531.1 | 2.84e-138 | 62.60 | uncharacterized protein LOC111482797 [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
AT5G41270.1 | 2.0e-24 | 32.49 | CONTAINS InterPro DOMAIN/s: RNAse P, Rpr2/Rpp21 subunit (InterPro:IPR007175); Ha... | [more] |