Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGAGCAAACCAATGATCAGGTTCAAGCAGTTCGTCAAGACGTTGAAGGATTGAAAGATCAATTGGCAAAGATCTTAGAACTGCTTACTATTGGAAGAGGAAAGAGTGTTACGGGGATTTCATCACAAGTGGAAGTAGATCTGAACCAGGTGCTAGAAGACATGCCTGCATACCCTCCAGGTTTTACTCCGCAAAGGTCGTCTAGTCCTCGCATGACTTATTCTACACAAAATCCTAATCCGATCACCCAACAGGAAAACCATGTGAGCGATCCAATGTCTACTCCAATTACAGAAAGTGGTAAGAAAATTTTAGAAGAGCAGGGTAGTAGAAAAAGACTGGAATTCGTAGAAGAAAGATTACGCGCCATTGAAGGTGCAGACATGTATGGGAGTATCGACGCAACACAACTATGTTTGATATCATATGTGGTGATTCCTCCTAAATTCAAGACTCCAAATTTTGAGAAGTACAATGGAACCACGTGTCCAAAAAGTCATCTAGTTATGTACTGTCGGAAAATGTCAGCTTACGCTTATGATGATAAATTGTTGATTCATTGCTTCCAAGACAGCTTAGTCGGCCCGACTTCTCGCTGGTACATGCAATTGGATGGTTCACAAGTGCATAGGTGGAAGGATCTTGCTGATTCTTTTTTAAAACAATATAAGTACAACATTGATACGACACCCGATCGCCTGGATCTTTAG
mRNA sequence
ATGGATGAGCAAACCAATGATCAGGTTCAAGCAGTTCGTCAAGACGTTGAAGGATTGAAAGATCAATTGGCAAAGATCTTAGAACTGCTTACTATTGGAAGAGGAAAGAGTGTTACGGGGATTTCATCACAAGTGGAAGTAGATCTGAACCAGGTGCTAGAAGACATGCCTGCATACCCTCCAGGTTTTACTCCGCAAAGGTCGTCTAGTCCTCGCATGACTTATTCTACACAAAATCCTAATCCGATCACCCAACAGGAAAACCATGTGAGCGATCCAATGTCTACTCCAATTACAGAAAGTGGTAAGAAAATTTTAGAAGAGCAGGGTAGTAGAAAAAGACTGGAATTCGTAGAAGAAAGATTACGCGCCATTGAAGGTGCAGACATGTATGGGAGTATCGACGCAACACAACTATGTTTGATATCATATGTGGTGATTCCTCCTAAATTCAAGACTCCAAATTTTGAGAAGTACAATGGAACCACGTGTCCAAAAAGTCATCTAGTTATGTACTGTCGGAAAATGTCAGCTTACGCTTATGATGATAAATTGTTGATTCATTGCTTCCAAGACAGCTTAGTCGGCCCGACTTCTCGCTGGTACATGCAATTGGATGGTTCACAAGTGCATAGGTGGAAGGATCTTGCTGATTCTTTTTTAAAACAATATAAGTACAACATTGATACGACACCCGATCGCCTGGATCTTTAG
Coding sequence (CDS)
ATGGATGAGCAAACCAATGATCAGGTTCAAGCAGTTCGTCAAGACGTTGAAGGATTGAAAGATCAATTGGCAAAGATCTTAGAACTGCTTACTATTGGAAGAGGAAAGAGTGTTACGGGGATTTCATCACAAGTGGAAGTAGATCTGAACCAGGTGCTAGAAGACATGCCTGCATACCCTCCAGGTTTTACTCCGCAAAGGTCGTCTAGTCCTCGCATGACTTATTCTACACAAAATCCTAATCCGATCACCCAACAGGAAAACCATGTGAGCGATCCAATGTCTACTCCAATTACAGAAAGTGGTAAGAAAATTTTAGAAGAGCAGGGTAGTAGAAAAAGACTGGAATTCGTAGAAGAAAGATTACGCGCCATTGAAGGTGCAGACATGTATGGGAGTATCGACGCAACACAACTATGTTTGATATCATATGTGGTGATTCCTCCTAAATTCAAGACTCCAAATTTTGAGAAGTACAATGGAACCACGTGTCCAAAAAGTCATCTAGTTATGTACTGTCGGAAAATGTCAGCTTACGCTTATGATGATAAATTGTTGATTCATTGCTTCCAAGACAGCTTAGTCGGCCCGACTTCTCGCTGGTACATGCAATTGGATGGTTCACAAGTGCATAGGTGGAAGGATCTTGCTGATTCTTTTTTAAAACAATATAAGTACAACATTGATACGACACCCGATCGCCTGGATCTTTAG
Protein sequence
MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITESGKKILEEQGSRKRLEFVEERLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYAYDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL
Homology
BLAST of IVF0001310 vs. ExPASy TrEMBL
Match:
A0A5A7U4N8 (Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold404G00580 PE=4 SV=1)
HSP 1 Score: 481.5 bits (1238), Expect = 2.0e-132
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0
Query: 1 MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYP 60
MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYP
Sbjct: 1 MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYP 60
Query: 61 PGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITESGKKILEEQGSRKRLEFVEE 120
PGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITESGKKILEEQGSRKRLEFVEE
Sbjct: 61 PGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITESGKKILEEQGSRKRLEFVEE 120
Query: 121 RLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYA 180
RLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYA
Sbjct: 121 RLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYA 180
Query: 181 YDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL 238
YDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL
Sbjct: 181 YDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL 237
BLAST of IVF0001310 vs. ExPASy TrEMBL
Match:
A0A1S3BHD8 (uncharacterized protein LOC103490085 OS=Cucumis melo OX=3656 GN=LOC103490085 PE=4 SV=1)
HSP 1 Score: 481.5 bits (1238), Expect = 2.0e-132
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0
Query: 1 MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYP 60
MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYP
Sbjct: 1 MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYP 60
Query: 61 PGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITESGKKILEEQGSRKRLEFVEE 120
PGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITESGKKILEEQGSRKRLEFVEE
Sbjct: 61 PGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITESGKKILEEQGSRKRLEFVEE 120
Query: 121 RLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYA 180
RLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYA
Sbjct: 121 RLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYA 180
Query: 181 YDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL 238
YDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL
Sbjct: 181 YDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL 237
BLAST of IVF0001310 vs. ExPASy TrEMBL
Match:
A0A5A7T401 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1593G00270 PE=4 SV=1)
HSP 1 Score: 440.7 bits (1132), Expect = 4.0e-120
Identity = 218/237 (91.98%), Postives = 224/237 (94.51%), Query Frame = 0
Query: 1 MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYP 60
MDEQTNDQVQAVRQDVEGLKDQLAKILEL T GR KSV GISSQVEVDLNQVLEDMPAYP
Sbjct: 1 MDEQTNDQVQAVRQDVEGLKDQLAKILELFTTGRRKSVAGISSQVEVDLNQVLEDMPAYP 60
Query: 61 PGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITESGKKILEEQGSRKRLEFVEE 120
GFTPQRSSSPRMTY TQNPNPITQQ +HVSDPMSTPIT+SGKKI EEQ SRKRLEF+EE
Sbjct: 61 IGFTPQRSSSPRMTYPTQNPNPITQQTDHVSDPMSTPITKSGKKISEEQSSRKRLEFLEE 120
Query: 121 RLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYA 180
RLR IEGADMYGSIDATQLCLIS VVIPPKFKTP+FEKYNGTTCPKSHLVMYC+KMSAYA
Sbjct: 121 RLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCQKMSAYA 180
Query: 181 YDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL 238
+DDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQY YNID TPDRLDL
Sbjct: 181 HDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYNYNIDMTPDRLDL 237
BLAST of IVF0001310 vs. ExPASy TrEMBL
Match:
A0A1S4E534 (uncharacterized protein LOC103502838 OS=Cucumis melo OX=3656 GN=LOC103502838 PE=4 SV=1)
HSP 1 Score: 440.7 bits (1132), Expect = 4.0e-120
Identity = 218/237 (91.98%), Postives = 224/237 (94.51%), Query Frame = 0
Query: 1 MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYP 60
MDEQTNDQVQAVRQDVEGLKDQLAKILEL T GR KSV GISSQVEVDLNQVLEDMPAYP
Sbjct: 1 MDEQTNDQVQAVRQDVEGLKDQLAKILELFTTGRRKSVAGISSQVEVDLNQVLEDMPAYP 60
Query: 61 PGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITESGKKILEEQGSRKRLEFVEE 120
GFTPQRSSSPRMTY TQNPNPITQQ +HVSDPMSTPIT+SGKKI EEQ SRKRLEF+EE
Sbjct: 61 IGFTPQRSSSPRMTYPTQNPNPITQQTDHVSDPMSTPITKSGKKISEEQSSRKRLEFLEE 120
Query: 121 RLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYA 180
RLR IEGADMYGSIDATQLCLIS VVIPPKFKTP+FEKYNGTTCPKSHLVMYC+KMSAYA
Sbjct: 121 RLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCQKMSAYA 180
Query: 181 YDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL 238
+DDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQY YNID TPDRLDL
Sbjct: 181 HDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYNYNIDMTPDRLDL 237
BLAST of IVF0001310 vs. ExPASy TrEMBL
Match:
A0A5D3C562 (Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold718G00220 PE=4 SV=1)
HSP 1 Score: 436.0 bits (1120), Expect = 9.8e-119
Identity = 218/237 (91.98%), Postives = 223/237 (94.09%), Query Frame = 0
Query: 1 MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYP 60
MDEQTNDQVQAVRQDVEGLKDQLAKILELLT GRGKSV GISSQVEVDLNQVLEDMPAYP
Sbjct: 1 MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMPAYP 60
Query: 61 PGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITESGKKILEEQGSRKRLEFVEE 120
PGFTPQRSSSPRMTY TQNPNPITQQ NHVSDPMSTPITESGKKI EEQGSRKRLEF+EE
Sbjct: 61 PGFTPQRSSSPRMTYPTQNPNPITQQANHVSDPMSTPITESGKKISEEQGSRKRLEFLEE 120
Query: 121 RLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYA 180
RLRAI+GADMYGSIDA QLCLIS VVIP KFKTP+FEKYNGTTCPKSHLVMYCRKMSAYA
Sbjct: 121 RLRAIKGADMYGSIDAAQLCLISDVVIPAKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYA 180
Query: 181 YDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL 238
+DDKLLI C QD+LVG TSR YMQLDGSQVHRWKDLADSFLKQYKYNID PDRLDL
Sbjct: 181 HDDKLLIDCIQDNLVGSTSRRYMQLDGSQVHRWKDLADSFLKQYKYNIDMAPDRLDL 237
BLAST of IVF0001310 vs. NCBI nr
Match:
XP_008447676.1 (PREDICTED: uncharacterized protein LOC103490085 [Cucumis melo] >KAA0050803.1 Gag-pro-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 478 bits (1231), Expect = 4.87e-169
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0
Query: 1 MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYP 60
MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYP
Sbjct: 1 MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYP 60
Query: 61 PGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITESGKKILEEQGSRKRLEFVEE 120
PGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITESGKKILEEQGSRKRLEFVEE
Sbjct: 61 PGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITESGKKILEEQGSRKRLEFVEE 120
Query: 121 RLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYA 180
RLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYA
Sbjct: 121 RLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYA 180
Query: 181 YDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL 237
YDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL
Sbjct: 181 YDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL 237
BLAST of IVF0001310 vs. NCBI nr
Match:
TYK06464.1 (Gag-pro-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 433 bits (1113), Expect = 3.22e-152
Identity = 218/237 (91.98%), Postives = 223/237 (94.09%), Query Frame = 0
Query: 1 MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYP 60
MDEQTNDQVQAVRQDVEGLKDQLAKILELLT GRGKSV GISSQVEVDLNQVLEDMPAYP
Sbjct: 1 MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMPAYP 60
Query: 61 PGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITESGKKILEEQGSRKRLEFVEE 120
PGFTPQRSSSPRMTY TQNPNPITQQ NHVSDPMSTPITESGKKI EEQGSRKRLEF+EE
Sbjct: 61 PGFTPQRSSSPRMTYPTQNPNPITQQANHVSDPMSTPITESGKKISEEQGSRKRLEFLEE 120
Query: 121 RLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYA 180
RLRAI+GADMYGSIDA QLCLIS VVIP KFKTP+FEKYNGTTCPKSHLVMYCRKMSAYA
Sbjct: 121 RLRAIKGADMYGSIDAAQLCLISDVVIPAKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYA 180
Query: 181 YDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL 237
+DDKLLI C QD+LVG TSR YMQLDGSQVHRWKDLADSFLKQYKYNID PDRLDL
Sbjct: 181 HDDKLLIDCIQDNLVGSTSRRYMQLDGSQVHRWKDLADSFLKQYKYNIDMAPDRLDL 237
BLAST of IVF0001310 vs. NCBI nr
Match:
XP_016902756.1 (PREDICTED: uncharacterized protein LOC107991868 [Cucumis melo] >KAA0025341.1 Gag-pro-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 430 bits (1105), Expect = 5.34e-151
Identity = 217/237 (91.56%), Postives = 222/237 (93.67%), Query Frame = 0
Query: 1 MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYP 60
MDEQTNDQVQAVRQDVEGLKDQLAKILELLT GRGKSV GISSQVEVDLNQVLEDMPAYP
Sbjct: 1 MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMPAYP 60
Query: 61 PGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITESGKKILEEQGSRKRLEFVEE 120
GFTPQRSSSPRMTY TQNPNPITQQ NHVSDPMSTPITESGKKI EEQGSRKRLEF+EE
Sbjct: 61 QGFTPQRSSSPRMTYPTQNPNPITQQANHVSDPMSTPITESGKKISEEQGSRKRLEFLEE 120
Query: 121 RLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYA 180
RLRAI+GADMYGSIDA QLCLIS VVIP KFKTP+FEKYNGTTCPKSHLVMYCRKMSAYA
Sbjct: 121 RLRAIKGADMYGSIDAAQLCLISDVVIPAKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYA 180
Query: 181 YDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL 237
+DDKLLI C QD+LVG TSR YMQLDGSQVHRWKDLADSFLKQYKYNID PDRLDL
Sbjct: 181 HDDKLLIDCIQDNLVGSTSRRYMQLDGSQVHRWKDLADSFLKQYKYNIDMAPDRLDL 237
BLAST of IVF0001310 vs. NCBI nr
Match:
XP_016903339.1 (PREDICTED: uncharacterized protein LOC103502838 [Cucumis melo])
HSP 1 Score: 437 bits (1125), Expect = 8.50e-149
Identity = 218/237 (91.98%), Postives = 224/237 (94.51%), Query Frame = 0
Query: 1 MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYP 60
MDEQTNDQVQAVRQDVEGLKDQLAKILEL T GR KSV GISSQVEVDLNQVLEDMPAYP
Sbjct: 1 MDEQTNDQVQAVRQDVEGLKDQLAKILELFTTGRRKSVAGISSQVEVDLNQVLEDMPAYP 60
Query: 61 PGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITESGKKILEEQGSRKRLEFVEE 120
GFTPQRSSSPRMTY TQNPNPITQQ +HVSDPMSTPIT+SGKKI EEQ SRKRLEF+EE
Sbjct: 61 IGFTPQRSSSPRMTYPTQNPNPITQQTDHVSDPMSTPITKSGKKISEEQSSRKRLEFLEE 120
Query: 121 RLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYA 180
RLR IEGADMYGSIDATQLCLIS VVIPPKFKTP+FEKYNGTTCPKSHLVMYC+KMSAYA
Sbjct: 121 RLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCQKMSAYA 180
Query: 181 YDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL 237
+DDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQY YNID TPDRLDL
Sbjct: 181 HDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYNYNIDMTPDRLDL 237
BLAST of IVF0001310 vs. NCBI nr
Match:
KAA0056810.1 (Gag-pro-like protein [Cucumis melo var. makuwa] >TYJ99931.1 Gag-pro-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 426 bits (1094), Expect = 5.44e-148
Identity = 213/237 (89.87%), Postives = 221/237 (93.25%), Query Frame = 0
Query: 1 MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYP 60
MDEQTNDQVQAVRQDVEGLKDQLAKILELLT RGKSVTGISSQVEVDL+QVLEDM AYP
Sbjct: 1 MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTARGKSVTGISSQVEVDLSQVLEDMLAYP 60
Query: 61 PGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITESGKKILEEQGSRKRLEFVEE 120
GFT QRSS+PRMTY TQNPN ITQ ENHVSDPMSTPIT+SGKKI EEQ SRKRL+F+EE
Sbjct: 61 SGFTSQRSSNPRMTYPTQNPNSITQHENHVSDPMSTPITKSGKKISEEQSSRKRLKFLEE 120
Query: 121 RLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYA 180
RLRAIEGADMYGSIDATQLCLIS VVIPPKFKTP+FEKYNG TCPKSHLVMYCRKMS YA
Sbjct: 121 RLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGITCPKSHLVMYCRKMSTYA 180
Query: 181 YDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL 237
+DDKLLIHCFQDSLVGP S WY+QLDGSQVHRWKDLADSFLKQYKYNIDT PDRLDL
Sbjct: 181 HDDKLLIHCFQDSLVGPASCWYLQLDGSQVHRWKDLADSFLKQYKYNIDTAPDRLDL 237
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7U4N8 | 2.0e-132 | 100.00 | Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold404... | [more] |
A0A1S3BHD8 | 2.0e-132 | 100.00 | uncharacterized protein LOC103490085 OS=Cucumis melo OX=3656 GN=LOC103490085 PE=... | [more] |
A0A5A7T401 | 4.0e-120 | 91.98 | Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... | [more] |
A0A1S4E534 | 4.0e-120 | 91.98 | uncharacterized protein LOC103502838 OS=Cucumis melo OX=3656 GN=LOC103502838 PE=... | [more] |
A0A5D3C562 | 9.8e-119 | 91.98 | Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold718... | [more] |
Match Name | E-value | Identity | Description | |
XP_008447676.1 | 4.87e-169 | 100.00 | PREDICTED: uncharacterized protein LOC103490085 [Cucumis melo] >KAA0050803.1 Gag... | [more] |
TYK06464.1 | 3.22e-152 | 91.98 | Gag-pro-like protein [Cucumis melo var. makuwa] | [more] |
XP_016902756.1 | 5.34e-151 | 91.56 | PREDICTED: uncharacterized protein LOC107991868 [Cucumis melo] >KAA0025341.1 Gag... | [more] |
XP_016903339.1 | 8.50e-149 | 91.98 | PREDICTED: uncharacterized protein LOC103502838 [Cucumis melo] | [more] |
KAA0056810.1 | 5.44e-148 | 89.87 | Gag-pro-like protein [Cucumis melo var. makuwa] >TYJ99931.1 Gag-pro-like protein... | [more] |
Match Name | E-value | Identity | Description | |