IVF0001310 (gene) Melon (IVF77) v1

Overview


Name	IVF0001310
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Gag-pro-like protein
Location	chr04: 14819445 .. 14820158 (-)
RNA-Seq Expression	IVF0001310
Synteny	IVF0001310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGAGCAAACCAATGATCAGGTTCAAGCAGTTCGTCAAGACGTTGAAGGATTGAAAGATCAATTGGCAAAGATCTTAGAACTGCTTACTATTGGAAGAGGAAAGAGTGTTACGGGGATTTCATCACAAGTGGAAGTAGATCTGAACCAGGTGCTAGAAGACATGCCTGCATACCCTCCAGGTTTTACTCCGCAAAGGTCGTCTAGTCCTCGCATGACTTATTCTACACAAAATCCTAATCCGATCACCCAACAGGAAAACCATGTGAGCGATCCAATGTCTACTCCAATTACAGAAAGTGGTAAGAAAATTTTAGAAGAGCAGGGTAGTAGAAAAAGACTGGAATTCGTAGAAGAAAGATTACGCGCCATTGAAGGTGCAGACATGTATGGGAGTATCGACGCAACACAACTATGTTTGATATCATATGTGGTGATTCCTCCTAAATTCAAGACTCCAAATTTTGAGAAGTACAATGGAACCACGTGTCCAAAAAGTCATCTAGTTATGTACTGTCGGAAAATGTCAGCTTACGCTTATGATGATAAATTGTTGATTCATTGCTTCCAAGACAGCTTAGTCGGCCCGACTTCTCGCTGGTACATGCAATTGGATGGTTCACAAGTGCATAGGTGGAAGGATCTTGCTGATTCTTTTTTAAAACAATATAAGTACAACATTGATACGACACCCGATCGCCTGGATCTTTAG

mRNA sequence

ATGGATGAGCAAACCAATGATCAGGTTCAAGCAGTTCGTCAAGACGTTGAAGGATTGAAAGATCAATTGGCAAAGATCTTAGAACTGCTTACTATTGGAAGAGGAAAGAGTGTTACGGGGATTTCATCACAAGTGGAAGTAGATCTGAACCAGGTGCTAGAAGACATGCCTGCATACCCTCCAGGTTTTACTCCGCAAAGGTCGTCTAGTCCTCGCATGACTTATTCTACACAAAATCCTAATCCGATCACCCAACAGGAAAACCATGTGAGCGATCCAATGTCTACTCCAATTACAGAAAGTGGTAAGAAAATTTTAGAAGAGCAGGGTAGTAGAAAAAGACTGGAATTCGTAGAAGAAAGATTACGCGCCATTGAAGGTGCAGACATGTATGGGAGTATCGACGCAACACAACTATGTTTGATATCATATGTGGTGATTCCTCCTAAATTCAAGACTCCAAATTTTGAGAAGTACAATGGAACCACGTGTCCAAAAAGTCATCTAGTTATGTACTGTCGGAAAATGTCAGCTTACGCTTATGATGATAAATTGTTGATTCATTGCTTCCAAGACAGCTTAGTCGGCCCGACTTCTCGCTGGTACATGCAATTGGATGGTTCACAAGTGCATAGGTGGAAGGATCTTGCTGATTCTTTTTTAAAACAATATAAGTACAACATTGATACGACACCCGATCGCCTGGATCTTTAG

Coding sequence (CDS)

ATGGATGAGCAAACCAATGATCAGGTTCAAGCAGTTCGTCAAGACGTTGAAGGATTGAAAGATCAATTGGCAAAGATCTTAGAACTGCTTACTATTGGAAGAGGAAAGAGTGTTACGGGGATTTCATCACAAGTGGAAGTAGATCTGAACCAGGTGCTAGAAGACATGCCTGCATACCCTCCAGGTTTTACTCCGCAAAGGTCGTCTAGTCCTCGCATGACTTATTCTACACAAAATCCTAATCCGATCACCCAACAGGAAAACCATGTGAGCGATCCAATGTCTACTCCAATTACAGAAAGTGGTAAGAAAATTTTAGAAGAGCAGGGTAGTAGAAAAAGACTGGAATTCGTAGAAGAAAGATTACGCGCCATTGAAGGTGCAGACATGTATGGGAGTATCGACGCAACACAACTATGTTTGATATCATATGTGGTGATTCCTCCTAAATTCAAGACTCCAAATTTTGAGAAGTACAATGGAACCACGTGTCCAAAAAGTCATCTAGTTATGTACTGTCGGAAAATGTCAGCTTACGCTTATGATGATAAATTGTTGATTCATTGCTTCCAAGACAGCTTAGTCGGCCCGACTTCTCGCTGGTACATGCAATTGGATGGTTCACAAGTGCATAGGTGGAAGGATCTTGCTGATTCTTTTTTAAAACAATATAAGTACAACATTGATACGACACCCGATCGCCTGGATCTTTAG

Protein sequence

MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITESGKKILEEQGSRKRLEFVEERLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYAYDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL

Homology

[Close]

BLAST of IVF0001310 vs. ExPASy TrEMBL
Match: A0A5A7U4N8 (Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold404G00580 PE=4 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 2.0e-132
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0


Query: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYP 60
           MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYP 60

Query: 61  PGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITESGKKILEEQGSRKRLEFVEE 120
           PGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITESGKKILEEQGSRKRLEFVEE
Sbjct: 61  PGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITESGKKILEEQGSRKRLEFVEE 120

Query: 121 RLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYA 180
           RLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYA
Sbjct: 121 RLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYA 180

Query: 181 YDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL 238
           YDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL
Sbjct: 181 YDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL 237

[Close]

BLAST of IVF0001310 vs. ExPASy TrEMBL
Match: A0A1S3BHD8 (uncharacterized protein LOC103490085 OS=Cucumis melo OX=3656 GN=LOC103490085 PE=4 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 2.0e-132
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0


Query: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYP 60
           MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYP 60

Query: 61  PGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITESGKKILEEQGSRKRLEFVEE 120
           PGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITESGKKILEEQGSRKRLEFVEE
Sbjct: 61  PGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITESGKKILEEQGSRKRLEFVEE 120

Query: 121 RLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYA 180
           RLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYA
Sbjct: 121 RLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYA 180

Query: 181 YDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL 238
           YDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL
Sbjct: 181 YDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL 237

[Close]

BLAST of IVF0001310 vs. ExPASy TrEMBL
Match: A0A5A7T401 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1593G00270 PE=4 SV=1)

HSP 1 Score: 440.7 bits (1132), Expect = 4.0e-120
Identity = 218/237 (91.98%), Postives = 224/237 (94.51%), Query Frame = 0


Query: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYP 60
           MDEQTNDQVQAVRQDVEGLKDQLAKILEL T GR KSV GISSQVEVDLNQVLEDMPAYP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELFTTGRRKSVAGISSQVEVDLNQVLEDMPAYP 60

Query: 61  PGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITESGKKILEEQGSRKRLEFVEE 120
            GFTPQRSSSPRMTY TQNPNPITQQ +HVSDPMSTPIT+SGKKI EEQ SRKRLEF+EE
Sbjct: 61  IGFTPQRSSSPRMTYPTQNPNPITQQTDHVSDPMSTPITKSGKKISEEQSSRKRLEFLEE 120

Query: 121 RLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYA 180
           RLR IEGADMYGSIDATQLCLIS VVIPPKFKTP+FEKYNGTTCPKSHLVMYC+KMSAYA
Sbjct: 121 RLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCQKMSAYA 180

Query: 181 YDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL 238
           +DDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQY YNID TPDRLDL
Sbjct: 181 HDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYNYNIDMTPDRLDL 237

[Close]

BLAST of IVF0001310 vs. ExPASy TrEMBL
Match: A0A1S4E534 (uncharacterized protein LOC103502838 OS=Cucumis melo OX=3656 GN=LOC103502838 PE=4 SV=1)

HSP 1 Score: 440.7 bits (1132), Expect = 4.0e-120
Identity = 218/237 (91.98%), Postives = 224/237 (94.51%), Query Frame = 0


Query: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYP 60
           MDEQTNDQVQAVRQDVEGLKDQLAKILEL T GR KSV GISSQVEVDLNQVLEDMPAYP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELFTTGRRKSVAGISSQVEVDLNQVLEDMPAYP 60

Query: 61  PGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITESGKKILEEQGSRKRLEFVEE 120
            GFTPQRSSSPRMTY TQNPNPITQQ +HVSDPMSTPIT+SGKKI EEQ SRKRLEF+EE
Sbjct: 61  IGFTPQRSSSPRMTYPTQNPNPITQQTDHVSDPMSTPITKSGKKISEEQSSRKRLEFLEE 120

Query: 121 RLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYA 180
           RLR IEGADMYGSIDATQLCLIS VVIPPKFKTP+FEKYNGTTCPKSHLVMYC+KMSAYA
Sbjct: 121 RLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCQKMSAYA 180

Query: 181 YDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL 238
           +DDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQY YNID TPDRLDL
Sbjct: 181 HDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYNYNIDMTPDRLDL 237

[Close]

BLAST of IVF0001310 vs. ExPASy TrEMBL
Match: A0A5D3C562 (Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold718G00220 PE=4 SV=1)

HSP 1 Score: 436.0 bits (1120), Expect = 9.8e-119
Identity = 218/237 (91.98%), Postives = 223/237 (94.09%), Query Frame = 0


Query: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYP 60
           MDEQTNDQVQAVRQDVEGLKDQLAKILELLT GRGKSV GISSQVEVDLNQVLEDMPAYP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMPAYP 60

Query: 61  PGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITESGKKILEEQGSRKRLEFVEE 120
           PGFTPQRSSSPRMTY TQNPNPITQQ NHVSDPMSTPITESGKKI EEQGSRKRLEF+EE
Sbjct: 61  PGFTPQRSSSPRMTYPTQNPNPITQQANHVSDPMSTPITESGKKISEEQGSRKRLEFLEE 120

Query: 121 RLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYA 180
           RLRAI+GADMYGSIDA QLCLIS VVIP KFKTP+FEKYNGTTCPKSHLVMYCRKMSAYA
Sbjct: 121 RLRAIKGADMYGSIDAAQLCLISDVVIPAKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYA 180

Query: 181 YDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL 238
           +DDKLLI C QD+LVG TSR YMQLDGSQVHRWKDLADSFLKQYKYNID  PDRLDL
Sbjct: 181 HDDKLLIDCIQDNLVGSTSRRYMQLDGSQVHRWKDLADSFLKQYKYNIDMAPDRLDL 237

[Close]

BLAST of IVF0001310 vs. NCBI nr
Match: XP_008447676.1 (PREDICTED: uncharacterized protein LOC103490085 [Cucumis melo] >KAA0050803.1 Gag-pro-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 478 bits (1231), Expect = 4.87e-169
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0


Query: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYP 60
           MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYP 60

Query: 61  PGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITESGKKILEEQGSRKRLEFVEE 120
           PGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITESGKKILEEQGSRKRLEFVEE
Sbjct: 61  PGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITESGKKILEEQGSRKRLEFVEE 120

Query: 121 RLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYA 180
           RLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYA
Sbjct: 121 RLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYA 180

Query: 181 YDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL 237
           YDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL
Sbjct: 181 YDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL 237

[Close]

BLAST of IVF0001310 vs. NCBI nr
Match: TYK06464.1 (Gag-pro-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 433 bits (1113), Expect = 3.22e-152
Identity = 218/237 (91.98%), Postives = 223/237 (94.09%), Query Frame = 0


Query: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYP 60
           MDEQTNDQVQAVRQDVEGLKDQLAKILELLT GRGKSV GISSQVEVDLNQVLEDMPAYP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMPAYP 60

Query: 61  PGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITESGKKILEEQGSRKRLEFVEE 120
           PGFTPQRSSSPRMTY TQNPNPITQQ NHVSDPMSTPITESGKKI EEQGSRKRLEF+EE
Sbjct: 61  PGFTPQRSSSPRMTYPTQNPNPITQQANHVSDPMSTPITESGKKISEEQGSRKRLEFLEE 120

Query: 121 RLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYA 180
           RLRAI+GADMYGSIDA QLCLIS VVIP KFKTP+FEKYNGTTCPKSHLVMYCRKMSAYA
Sbjct: 121 RLRAIKGADMYGSIDAAQLCLISDVVIPAKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYA 180

Query: 181 YDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL 237
           +DDKLLI C QD+LVG TSR YMQLDGSQVHRWKDLADSFLKQYKYNID  PDRLDL
Sbjct: 181 HDDKLLIDCIQDNLVGSTSRRYMQLDGSQVHRWKDLADSFLKQYKYNIDMAPDRLDL 237

[Close]

BLAST of IVF0001310 vs. NCBI nr
Match: XP_016902756.1 (PREDICTED: uncharacterized protein LOC107991868 [Cucumis melo] >KAA0025341.1 Gag-pro-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 430 bits (1105), Expect = 5.34e-151
Identity = 217/237 (91.56%), Postives = 222/237 (93.67%), Query Frame = 0


Query: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYP 60
           MDEQTNDQVQAVRQDVEGLKDQLAKILELLT GRGKSV GISSQVEVDLNQVLEDMPAYP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMPAYP 60

Query: 61  PGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITESGKKILEEQGSRKRLEFVEE 120
            GFTPQRSSSPRMTY TQNPNPITQQ NHVSDPMSTPITESGKKI EEQGSRKRLEF+EE
Sbjct: 61  QGFTPQRSSSPRMTYPTQNPNPITQQANHVSDPMSTPITESGKKISEEQGSRKRLEFLEE 120

Query: 121 RLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYA 180
           RLRAI+GADMYGSIDA QLCLIS VVIP KFKTP+FEKYNGTTCPKSHLVMYCRKMSAYA
Sbjct: 121 RLRAIKGADMYGSIDAAQLCLISDVVIPAKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYA 180

Query: 181 YDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL 237
           +DDKLLI C QD+LVG TSR YMQLDGSQVHRWKDLADSFLKQYKYNID  PDRLDL
Sbjct: 181 HDDKLLIDCIQDNLVGSTSRRYMQLDGSQVHRWKDLADSFLKQYKYNIDMAPDRLDL 237

[Close]

BLAST of IVF0001310 vs. NCBI nr
Match: XP_016903339.1 (PREDICTED: uncharacterized protein LOC103502838 [Cucumis melo])

HSP 1 Score: 437 bits (1125), Expect = 8.50e-149
Identity = 218/237 (91.98%), Postives = 224/237 (94.51%), Query Frame = 0


Query: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYP 60
           MDEQTNDQVQAVRQDVEGLKDQLAKILEL T GR KSV GISSQVEVDLNQVLEDMPAYP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELFTTGRRKSVAGISSQVEVDLNQVLEDMPAYP 60

Query: 61  PGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITESGKKILEEQGSRKRLEFVEE 120
            GFTPQRSSSPRMTY TQNPNPITQQ +HVSDPMSTPIT+SGKKI EEQ SRKRLEF+EE
Sbjct: 61  IGFTPQRSSSPRMTYPTQNPNPITQQTDHVSDPMSTPITKSGKKISEEQSSRKRLEFLEE 120

Query: 121 RLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYA 180
           RLR IEGADMYGSIDATQLCLIS VVIPPKFKTP+FEKYNGTTCPKSHLVMYC+KMSAYA
Sbjct: 121 RLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCQKMSAYA 180

Query: 181 YDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL 237
           +DDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQY YNID TPDRLDL
Sbjct: 181 HDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYNYNIDMTPDRLDL 237

[Close]

BLAST of IVF0001310 vs. NCBI nr
Match: KAA0056810.1 (Gag-pro-like protein [Cucumis melo var. makuwa] >TYJ99931.1 Gag-pro-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 426 bits (1094), Expect = 5.44e-148
Identity = 213/237 (89.87%), Postives = 221/237 (93.25%), Query Frame = 0


Query: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYP 60
           MDEQTNDQVQAVRQDVEGLKDQLAKILELLT  RGKSVTGISSQVEVDL+QVLEDM AYP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTARGKSVTGISSQVEVDLSQVLEDMLAYP 60

Query: 61  PGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITESGKKILEEQGSRKRLEFVEE 120
            GFT QRSS+PRMTY TQNPN ITQ ENHVSDPMSTPIT+SGKKI EEQ SRKRL+F+EE
Sbjct: 61  SGFTSQRSSNPRMTYPTQNPNSITQHENHVSDPMSTPITKSGKKISEEQSSRKRLKFLEE 120

Query: 121 RLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYA 180
           RLRAIEGADMYGSIDATQLCLIS VVIPPKFKTP+FEKYNG TCPKSHLVMYCRKMS YA
Sbjct: 121 RLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGITCPKSHLVMYCRKMSTYA 180

Query: 181 YDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL 237
           +DDKLLIHCFQDSLVGP S WY+QLDGSQVHRWKDLADSFLKQYKYNIDT PDRLDL
Sbjct: 181 HDDKLLIHCFQDSLVGPASCWYLQLDGSQVHRWKDLADSFLKQYKYNIDTAPDRLDL 237

The following BLAST results are available for this feature:

BLAST of IVF0001310 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0001310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U4N8	2.0e-132	100.00	Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold404...	[more]
A0A1S3BHD8	2.0e-132	100.00	uncharacterized protein LOC103490085 OS=Cucumis melo OX=3656 GN=LOC103490085 PE=...	[more]
A0A5A7T401	4.0e-120	91.98	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S4E534	4.0e-120	91.98	uncharacterized protein LOC103502838 OS=Cucumis melo OX=3656 GN=LOC103502838 PE=...	[more]
A0A5D3C562	9.8e-119	91.98	Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold718...	[more]

BLAST of IVF0001310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447676.1	4.87e-169	100.00	PREDICTED: uncharacterized protein LOC103490085 [Cucumis melo] >KAA0050803.1 Gag...	[more]
TYK06464.1	3.22e-152	91.98	Gag-pro-like protein [Cucumis melo var. makuwa]	[more]
XP_016902756.1	5.34e-151	91.56	PREDICTED: uncharacterized protein LOC107991868 [Cucumis melo] >KAA0025341.1 Gag...	[more]
XP_016903339.1	8.50e-149	91.98	PREDICTED: uncharacterized protein LOC103502838 [Cucumis melo]	[more]
KAA0056810.1	5.44e-148	89.87	Gag-pro-like protein [Cucumis melo var. makuwa] >TYJ99931.1 Gag-pro-like protein...	[more]

BLAST of IVF0001310 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 2..29

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0001310.1	IVF0001310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0003964	RNA-directed DNA polymerase activity