IVF0000939 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACATATTGCGAGGACGTTGACGACGAGGACGACGGGGACTCCACGTACGCGACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCAGTGGCGCGACGACCTAGCCGAATCGATGTTCACCGAATGGCAGTTGCGAAACGCTTAG ATGACATATTGCGAGGACGTTGACGACGAGGACGACGGGGACTCCACGTACGCGACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCAGTGGCGCGACGACCTAGCCGAATCGATGTTCACCGAATGGCAGTTGCGAAACGCTTAG ATGACATATTGCGAGGACGTTGACGACGAGGACGACGGGGACTCCACGTACGCGACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCAGTGGCGCGACGACCTAGCCGAATCGATGTTCACCGAATGGCAGTTGCGAAACGCTTAG MTYCEDVDDEDDGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA Homology
BLAST of IVF0000939 vs. ExPASy TrEMBL
Match: A0A5A7SZH3 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold510G00390 PE=3 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 6.8e-23 Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of IVF0000939 vs. ExPASy TrEMBL
Match: A0A5A7UZF0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G00690 PE=3 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 5.8e-22 Identity = 53/55 (96.36%), Postives = 54/55 (98.18%), Query Frame = 0
BLAST of IVF0000939 vs. ExPASy TrEMBL
Match: A0A5A7V4Q8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold154G00240 PE=3 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 5.8e-22 Identity = 52/55 (94.55%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of IVF0000939 vs. ExPASy TrEMBL
Match: A0A5A7UID8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G001540 PE=3 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 7.5e-22 Identity = 53/55 (96.36%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of IVF0000939 vs. ExPASy TrEMBL
Match: A0A5A7U4G2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00400 PE=3 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 7.5e-22 Identity = 53/55 (96.36%), Postives = 54/55 (98.18%), Query Frame = 0
BLAST of IVF0000939 vs. NCBI nr
Match: KAA0062284.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 111 bits (277), Expect = 4.57e-30 Identity = 52/55 (94.55%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of IVF0000939 vs. NCBI nr
Match: KAA0058871.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK23750.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 111 bits (277), Expect = 4.57e-30 Identity = 53/55 (96.36%), Postives = 54/55 (98.18%), Query Frame = 0
BLAST of IVF0000939 vs. NCBI nr
Match: TYK05336.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 110 bits (275), Expect = 9.21e-30 Identity = 52/55 (94.55%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of IVF0000939 vs. NCBI nr
Match: TYK11987.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 108 bits (271), Expect = 3.75e-29 Identity = 52/55 (94.55%), Postives = 54/55 (98.18%), Query Frame = 0
BLAST of IVF0000939 vs. NCBI nr
Match: TYK04228.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 107 bits (266), Expect = 5.13e-29 Identity = 50/55 (90.91%), Postives = 54/55 (98.18%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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