IVF0000894 (gene) Melon (IVF77) v1

Overview


Name	IVF0000894
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	CCHC-type domain-containing protein
Location	chr02: 10947850 .. 10955783 (+)
RNA-Seq Expression	IVF0000894
Synteny	IVF0000894

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCAGATTATAAACAAAGTTGGTTCTTATTGGTTCAACCAGAAGGCCAGTAAGGAGATCGACTCCATCGGCGATGAATCCCACTTCACTCTCTCCTCATTTCCCCCCTTTTCTTTTCCTTTATTAATTGTTGTATGATTTCGTTTGCGTTTCCTTTGTTGTTTTAATTCGTTTTTTTTAATGTTACAATTAGGGCTTTTATGATATCGACGTTGAGTTCTCCAGCTTTTGATATTAATTTGCTTCCCTTAATTAACATCTAAAACTTTAATTTTATAATGATTTGTTGTACTGATTTTTGTTCTTGTTTGTATTTTGGAGAAGAAATTTTGTTCAATAATCTAGGGTTCACAAATTGAACTCCATAGTTTTGACACTTTCTAATTGGATTGTCGTGTTGATGAGTCTACTTAGTCGGATTTCCATCTTGGCTGGCTGAGCGAGCGCACCAACTTTCTCAATTCTATTCGGACATTTGCTATGTGTCATTAAGAGTCTAGGTTAGCTCAAGAACCCCATTTATTGGAAGGACAATTGTGTCTTACTAGTTATTTGTGAAAGTAGAAAATTCATTATGATGGTGAATTGATGATCTCATTTTTAGCTAGGAAGAAGCATAAGCCCCCTTGAATATCAAAGTTTTTGGTTGAAGTATTGACTTTCCAAATGATAATGTTATTGGCCTATTGTTACAGGTGGATTCCACTTATTGCATTGCTCAAATGTATCAATCCTACGAAGAGACAGATTTATGGTAGTGACTTTAGATACTTTTTGGTTATCAACATATTCTTTTCCTTTTCAAATAGTAGTAATGCAATCTCATACGATTGTTTTGTAGAAAAATTGTGGAAGATGTTCCACGTGATGTGCATATCAATTTCTTGAAAGTTGAAAGAAGCTTGCACCGTCAGAGAATTCATGCTACAGGGGAACAGGCTGTTGAAGAGGGAGGTGGGGTTGAAATGCACGTTCTTGAGGATGTCGGTCATTGGGTATGGTTTTTTTTTCTCTTTTTACCTATCTTTTCTGAACTCATTATTTTTGTAAAATCATGATATAATGAAGAGTAAAACTATATGGTGTGTTATGTATTAACAGGTGCATGCTGATAACCCACATGGTCTCTTTCGGATCTTGTCATCCTCTTTCAAAGGGATTAGAACTTGAGGCGAGCAAGACCTTTTTCTTTCTTTTTTGGACAAGTGCAAAACTTTCTTGACACCATACATATCATATCATATGCATTGCATATCTCATTTGTTACAGATGGATTCCTTGAATATTAAAGTTTTTGGTTGAAATATTAGAGTAGTGCAACATGCTTTTCATTATCCATAATTTCTCTTGAAACGCACTCCTTCATGAAACATTGAGGAAGATTAAGCATAGTTTGGCAAAATAAATGCTTTCTTTTGTGTATTGGTTCTGGGATTCTAAAAAATAAAGATCATTGGACTATTTGAGGGTGATAACAATGACCATCATTTGAATTTGGGATTTCTTGAGCACAAAGTACTTCCTTTTCTCAACATTTGCTGCTGTTGGTTTTGCAGGACCTTTTCTGCTGTAGGTATGGATCCTACTATCATGGTTGTTGGCTTGGCTGTTGCAATTCTAGCTGCTATCAAGGCTGTTGGACATGAATCGAATGATATTTATCTTTTTGAAGTAAAAGAGGTAACCTTATGTTTTCATCACTAGTAAGGCTTAAAGTTCAAACCTATTCAATACATGTTGGCTTACTCTGGGTGCAACAGGTATGTTTCAAACATAAATAGTTTCTATGAACCAACACTTAAAATATAAGATCCTGATGAGTTAGAAAATATGTTTCTCTTTTAGTATATTTTTCTGAGTTTTTGGAGTATGTTAGTAATGAATCAATGTGTATGCAACATTTGCATTTTTTCTCTTTGTTTTTTTTACCTTACTTGGCTATTTAAAGAATAAAAAAGATATCGACTTTTTTTTTTACATTTTCTTGTGATTTTTTAACATTCGATAGGGAAAGGAAGAAGAGAAGGGGAAGATAAACATAAGTTGAGGTTTCCGAAACATATAAAGATTAAGATCGTTAGAGAGAATAATTGGATAGGAAGTTGTGTGACTTTTGATGAGTTCTTGCGTAATCCTGGCAATGGTGGTGGATTTTTGAAGCTTTACGAATCTAATGATCGACCAACTTACCGAAGCCAACATGATCGAATTTATTCACTTCGGTTCTTCTCTTCTTCAGTTTATCAGTTTTGTTGTGATGTATTGAGTTTGCTAAAAAAGGATAGTTTTTTGTTTAGGTTTGTTCTCAAAGGATTTTTTTCCTTTATAAACAAAATTGTAATGCACAGAAGATAACATATATTATTCAAGGAGATATTATATGTAAAGTTCTATGGTAATTCTTTTTTTAATAATGTGATTATGAAATGTTAATGACGCCAAATGGTTTTAATACAATACATTAAGTATTTACAACAACATAAAGACTCTAAAAGAATGCTTTCAAAACACTTCTTTATTTTGGGAAAATTACTTCACAAAACAGAAGATCACTCATAAAACACTAAGTTTCCTTTCTTTCAGAACCCCTAACTCCAGATCCTTCTCGCCTAACACTTTCTTTAGCAGCTCCACACTCAGGAAATTCTTATAATAACAATCCTTTGATCCTTTCAATCTTATTTAAACTACTCTAAAATTGCATTAGTCATCTTTGAGCCCCTCTTAGCTCACCAGCTCCTACTTACAACTTTACACATGTCGGCTTGTAACTCATCAGGTCATGCACTAAGCTTAAACTTAACACGTCACTAGTTGTCAACTCAAAATTAGACATTTTCCTAGCTCAGCTTCACTTCGCGTTACAGTATCAAAACGCTTAACTCTCTGCGTTGAACGCGTACTTCTTCCATGCCTGTTAATCTTATAGCATCGCCTAGCTTCAACGCGAACCTAAAAATGCCTACTTCTTCACAAAACGGCTTACACTACTTTCCAATCAAAATGAAACTCTTCTATTACTTGTCACGGGCTTCACACAAAAAGTTAAGTTGGGTTGCATTATTGCTTTCGGGTTCTAGTCAAGAAGTATTTCACCATCTAACCTAAATAGCTTCTTTAAATTTATCGAGGTGGAAATTATTTAGTGCATATATTATGTCTTTGATCTTAATGCTCATTAATGATAATTAGGGAATATCCCTTTATTAATTTGAAGTTGATGTGATTCAATGACTGTCCACTTAGGGTCTTAAGTGAGTGTGTATAAGTATAAACTTTGTTACCCTCCCTCCGTAGAAGTCTAGGTTTAAGAAACTAGATTGTTTATAATGCATCATTAGCTAAATCAATGATAAGAAAGAAAGAAGAATTAATACTCATCATAACCAAGCTAAGTTCACATAATTGATTAAATTTGAAATCTGGTACCATTTTCTCACATTTCTCACACAATTCACTTCACATCACCATCTTTATTTGTTTGTTTAACACATTTGGTTACTTCAATTCAAGTTTTCTCATTTATTACCGATTGCAAGTCTTTGGGTTTCAAGAAATAATCTAATAAGCTTCTTGTGGATTGTCTCTTGTCAAATTAAAAATTCTTTACGGAATAACACTACACGATATGCGATGATATGCAATAAGGACAAAACTATGCGATTGATAGTTTTGAAAGTCCTATGCGGTAGAGTTATCGAATTTTATAAATTATGTTATATTGATCATGACTATACAGTAATACTAGTTATGCGAGATGTTAGAATATCTCATTGCATACGTTGACATTCTAGGCAGAATGGTCAAGCAAGATGAGATATAATAAATGGCATGATACTTATTACATAATTAAAGAATCAAACATTTTATTACCATTTTACAGTTACTTATCAACATAATCTTCCCATAAACTACAAACGGTTTCATAACTAAAGATTGCGCTTTGACCACTAGGCATTTTGATTAGTTGGCATTCTGTTCAATTGTCGAGGTGATCAATAGGCGACTTGATCAGATGAGATACTAGTATCTTACGCGAGATACAAGGCAAAGAAAAACACGTTTTATCTAGCCGATCTATCTAGGCATTAAAGCTTCTCAACTTACTACTCCTTGGTGAAGCACAACAACAATTTTAAGACGTTTACATTCTGCTTCGATGGCCGAACAATTCGAAGGTGATTTTACATCCTCTGACCTCAGCTGTTCTTTTCGCTTTGAAAGAGTACACTTCAAAAGATGGAAGCAAAGATGTTGTTCTTCCTCACTTTTAAAAAAGTCGTCGCTACATGTACCACTGAAAAACCAAAGGTTCCAAAAATCAAACCAACGGAGGAGCAAATTAATAATTTTACCGCTTGAACAGAGATAGACTTCATCGGTAAGAATTTAATTCTTAATGATCTTCCTAATGAGTTGTATGATTATTACAGTACCATGTTTGCAGCAAAAGAAGTATGGGACGTGTTACAGAAAAAGTATGAAACTAAGGAAGCGAGATCGAAAACGTATGCAGTAAGCCGATACGTGCGATATCAAATGATAGATGATAGATTCATGGAGGCTCAATCACATGAAACTCAAAAGATAGCACATGAAATTATCAACGAAGGTATGAGGCTTGACGATCAATTTCAAGTTGCAGTTATCATTGACAAATTGCCTCCTCTGTGGAAAGATTTCAAGAATACTCTAAGGCACAAAACCCAGGAGTTCTCGCTGGAAAACCTCATCATGCGTCTAAGGATAGAGAAGGAGGCGAGAAAACATGATCAAAAGGAGGAAGTAAACGTAATTCCTAGGAAAAAGACTATCGTAGTTCTGAAGCTGGATCTGAAGTTAAAAGAGAACAAGATGAAACACGGATCCAATAAAGAGAACAACTTCTAGAAACCCCAGTCCAGAATTACGGTACAATTAGTTTGTTATAACAGCTATAACAAAACTAGGCATATAGCTAGAATGTTTAGAAACGAGAATCGTCCTATTGCGCTAGCAAACCTGGTAGAAGAAGATTTAGTAGCTATGATCACAGAAGTAAATGTGATCGGGGGGTCTGTAGGTTGGTGGCTAGACACTGGTGCATCTCGCCACATCTGTCATGACCTTAAATTATTTAGAAAATATAATGAGACTAAGGATAAAAAAATCCTTTTGGGAGAACTAACGTGGCCGACGTTGGAGAAACAGAACTGAAATTCACATATGGCAAGACACTTATGTTGAAGGAAGTTCTACATACTCCTGAAATTCGAAAGAATTTGGTCTCCAGATATCTCCTCAACAAGGCTAGCTTCACCCAAACCATAGGATCAGACTTGTTTACTTTAACTAGAAACAAGTATTTGTGGGAAAGGGTTACGCTACTGATGGGATGTTTAAATTGAATTTGGAAATGAATAAGAAATTATCTTCTACTTACATGTTGTCTACTTCTGATATTTGGCATGCTAGACTCTGTCATGTTAATAAAAGACTAATTGGCAACATGAGTAGGTTAAATCTTATTCCTAAGTTATCTTTGCATGAATTTAAGAAATGTGCATGTTATAGTTAAGCTAAGATAACAAAGACTTCACATAAATTTGTAACTAGGGTAATAAAGCCTGTTGAATTAATTCATTTCGATTTATGTGAATTCGATGGCATGTAAACTAGGAACAGTAAAGAGTATATTATAACCTTTACAGATGATTCTTCCGAGACTACACTTTTATTTACCTACTTAAAAATAAAAGTAATGTCTTGAACATGTTCAAGGTGTTAGTAACTGAATAGCTTCTTTAAATTTATCGAGGTGGAAATTATTTAGTGCATATATTATGTCTTTGATCTTAATGCTCATTAATGATAATTAGGGAATATCCCTCTATTAATTTGAAGTTGATGTGATTCAATGACTGTCCACTTAGGGTCTTAAGTGAGTGTGTATAAGTATAAACTTTGTCACCCTCCCTCCGTAGAAGACTAGGTTTAAGAAACTAGATTGTTTATAGTGCATCATTAGCTAAATCAATGATAAGAAAGAAAGAAGAATTAATACTCATCATAACCAAGCTAAGTTCTCATAATTGATTAAATTTGAAATCTGGTACCATTTTCTCACATTTCTCACACAATTCACTTCACATCACCATCTTTATTTGTTTGTTTAACACATTTGGTTACTTCAATTCAAGTTTTCTCATTCATTACCGATTGCAAGTCTTTGGGTTTCAAGAAATAATCTAATAAGCTTCTTGTGGATTGTCTCTTGTCGAATTAAAAATTCTTTACGCAATAACACTACACGATATGCGATGATATGCGATAAGGACAAAGCTATGTGATTGATAGTTTTGAAAGTCCTATGCGGTAGAGTTATCAAATTTTATAAATTATGTTATATTGATCATGACTATACAGTAATACTAGTTATGCGAGATGTTAGAATATCTCATTGCATACGTTGACATCCTAGGCAGAATGGTCAAACAAGATGAGATATAATAAATGACATGATACTTATTACATAATTAAAGAATCAAACATTTTATTACCATTTTACAATTACTTATCAACATAATCTTCCCATAAACTACAAACGGTTTCATAACTAAAGATTGTGCTTTGACCACTAGGCATTTTGATTAGTTGGCATTCTGTTCAATTGTCGAGGTGATCAATAGGCGACTTGATCGGATGAGATACTAATATCTTACACGAGATACAAGGCAAGGAAAAACACGTTTTATCTATCCGATCTATCTAGGCATTAAAGCTTCTTAACTTACTACTCCTTAGAGAAGCACAACAACAATTTTAAGACGTTTACATTCTGCTTCGATGGTCGAACAATTCGAAGGTGATTTTACATCCTCTAACCTCAGCTGTTCTTTTCGCTTTGAAAGAGTACACTTCAAGAGATGGAAGCAAAGATGTTGTTCTTCCTCACTTTTAAGAAAGTCGTCGCTACATGTACCACTGAAAAACCAAAGGTTCCAAAAATCAAACCAACGGAGGAGCAAATTAATAATTTTACCGCGTGAACAGAGACAGACTTCATCGGTAAGAATTTTATTCTTAATGATCTTCCTAATGAGTTGTATGATTATTACAGTACCATGTCTGCAGCAAAAGAAGTATAGGACGTGTTACAGAAAAAGTATGACACTAAGGAAGCGGGATCGAAAACGTATGCAGTAAGTCGATACATGCGATATCAAATGAAAGATGATATATTCATGGAGGCTCAATCACATGAAATTCAAAAGATAGCACATAAAATTATCAACGAAGGTATGAGGCTTGAGGATCAATTACAAGTTGCAGTTATCATTGACAAATTGCCTCCTCTGTGGAAAGATTTCAAGAATACTCTAAGGCACAAAACCCAGGAGTTCTCGCTGGAAAGTCTCATCATGCGTCTAAGGATAGAGAAGGAGGCGAGAAAACATGATCAAAAGGAGGAAGTAAACGTAATTCCTAGGAAAAAGTCTATCGTAGTTCTGAAGTTGGATCTGAAGTTGAAAGAGAACAAGATGAAACACGGATCCAATAAAGAGAACAACTTGCAGAAACCCCAGTCCAAAATTACGGTACAATTAGTTTGTTATAACAGCTGTAACAAAACTAGGCATATAGCTAGAATTTTTAGAAACGAGAATCGTCCTGTTGCGCTAGCAAACCTGGTAGAAGAAGATTTAGTAGCTATGATCACAGAAGTAAATGTGATCGGGGGGTCTGTAGGTTGGTGGCTAGACACTGGTACATCTCGCCACATCTGTCATGACCTTAAATTATTTAGAAAATATAATGAGACTAAGGATAAAAAAATCCTTTTGGGAGAACATCACACAACTAACGTGGCCGATGTTGGAGAAACAGAACTGAAATTCACATATGGCAAGACACTTATGCTGAAGGAAGTTCTACATACTCCTGAAATTTGA

mRNA sequence

ATGGATCAGATTATAAACAAAGTTGGTTCTTATTGGTTCAACCAGAAGGCCAGTAAGGAGATCGACTCCATCGGCGATGAATCCCACTTCACTCTCTCCTCATTTCCCCCCTTTTCTTTTCCTTTATTAATTGTTGTGGATTCCACTTATTGCATTGCTCAAATAAAAATTGTGGAAGATGTTCCACGTGATGTGCATATCAATTTCTTGAAAGTTGAAAGAAGCTTGCACCGTCAGAGAATTCATGCTACAGGGGAACAGGCTGTTGAAGAGGGAGGTGGGGTTGAAATGCACGTTCTTGAGGATGTCGGTCATTGGGTGCATGCTGATAACCCACATGGTCTCTTTCGGATCTTGACCTTTTCTGCTGTAGGTATGGATCCTACTATCATGGTTGTTGGCTTGGCTGTTGCAATTCTAGCTGCTATCAAGGCTGTTGGACATGAATCGAATGATATTTATCTTTTTGAAGTAAAAGAGTTCTTGCGTAATCCTGGCAATGGTGGTGGATTTTTGAAGCTTTACGAATCTAATGATCGACCAACTTACCGAAGCCAACATGATCGAATTTATTCACTTCGTACCATGTTTGCAGCAAAAGAAGTATGGGACGTGTTACAGAAAAAGTATGAAACTAAGGAAGCGAGATCGAAAACGTATGCAGTAAGCCGATACGTGCGATATCAAATGATAGATGATAGATTCATGGAGGCTCAATCACATGAAACTCAAAAGATAGCACATGAAATTATCAACGAAGGTATGAGGCTTGACGATCAATTTCAAGTTGCAGTTATCATTGACAAATTGCCTCCTCTGTGGAAAGATTTCAAGAATACTCTAAGGCACAAAACCCAGGAGTTCTCGCTGGAAAACCTCATCATGCGTCTAAGGATAGAGAAGGAGGCGAGAAAACATGATCAAAAGGAGGAAGTAAACAAAAAGTATGACACTAAGGAAGCGGGATCGAAAACGTATGCAGTAAGTCGATACATGCGATATCAAATGAAAGATGATATATTCATGGAGGCTCAATCACATGAAATTCAAAAGATAGCACATAAAATTATCAACGAAGGTATGAGGCTTGAGGATCAATTACAAGTTGCAGTTATCATTGACAAATTGCCTCCTCTGTGGAAAGATTTCAAGAATACTCTAAGGCACAAAACCCAGGAGTTCTCGCTGGAAAGTCTCATCATGCGTCTAAGGATAGAGAAGGAGGCGAGAAAACATGATCAAAAGGAGGAAGTAAACGTAATTCCTAGGAAAAAGTCTATCGTAGTTCTGAAGTTGGATCTGAAGTTGAAAGAGAACAAGATGAAACACGGATCCAATAAAGAGAACAACTTGCAGAAACCCCAGTCCAAAATTACGGTACAATTAGTTTGTTATAACAGCTGTAACAAAACTAGGCATATAGCTAGAATTTTTAGAAACGAGAATCGTCCTGTTGCGCTAGCAAACCTGGTAGAAGAAGATTTAGTAGCTATGATCACAGAAGTAAATGTGATCGGGGGGTCTGTAGGTTGGTGGCTAGACACTGGTACATCTCGCCACATCTGTCATGACCTTAAATTATTTAGAAAATATAATGAGACTAAGGATAAAAAAATCCTTTTGGGAGAACATCACACAACTAACGTGGCCGATGTTGGAGAAACAGAACTGAAATTCACATATGGCAAGACACTTATGCTGAAGGAAGTTCTACATACTCCTGAAATTTGA

Coding sequence (CDS)

ATGGATCAGATTATAAACAAAGTTGGTTCTTATTGGTTCAACCAGAAGGCCAGTAAGGAGATCGACTCCATCGGCGATGAATCCCACTTCACTCTCTCCTCATTTCCCCCCTTTTCTTTTCCTTTATTAATTGTTGTGGATTCCACTTATTGCATTGCTCAAATAAAAATTGTGGAAGATGTTCCACGTGATGTGCATATCAATTTCTTGAAAGTTGAAAGAAGCTTGCACCGTCAGAGAATTCATGCTACAGGGGAACAGGCTGTTGAAGAGGGAGGTGGGGTTGAAATGCACGTTCTTGAGGATGTCGGTCATTGGGTGCATGCTGATAACCCACATGGTCTCTTTCGGATCTTGACCTTTTCTGCTGTAGGTATGGATCCTACTATCATGGTTGTTGGCTTGGCTGTTGCAATTCTAGCTGCTATCAAGGCTGTTGGACATGAATCGAATGATATTTATCTTTTTGAAGTAAAAGAGTTCTTGCGTAATCCTGGCAATGGTGGTGGATTTTTGAAGCTTTACGAATCTAATGATCGACCAACTTACCGAAGCCAACATGATCGAATTTATTCACTTCGTACCATGTTTGCAGCAAAAGAAGTATGGGACGTGTTACAGAAAAAGTATGAAACTAAGGAAGCGAGATCGAAAACGTATGCAGTAAGCCGATACGTGCGATATCAAATGATAGATGATAGATTCATGGAGGCTCAATCACATGAAACTCAAAAGATAGCACATGAAATTATCAACGAAGGTATGAGGCTTGACGATCAATTTCAAGTTGCAGTTATCATTGACAAATTGCCTCCTCTGTGGAAAGATTTCAAGAATACTCTAAGGCACAAAACCCAGGAGTTCTCGCTGGAAAACCTCATCATGCGTCTAAGGATAGAGAAGGAGGCGAGAAAACATGATCAAAAGGAGGAAGTAAACAAAAAGTATGACACTAAGGAAGCGGGATCGAAAACGTATGCAGTAAGTCGATACATGCGATATCAAATGAAAGATGATATATTCATGGAGGCTCAATCACATGAAATTCAAAAGATAGCACATAAAATTATCAACGAAGGTATGAGGCTTGAGGATCAATTACAAGTTGCAGTTATCATTGACAAATTGCCTCCTCTGTGGAAAGATTTCAAGAATACTCTAAGGCACAAAACCCAGGAGTTCTCGCTGGAAAGTCTCATCATGCGTCTAAGGATAGAGAAGGAGGCGAGAAAACATGATCAAAAGGAGGAAGTAAACGTAATTCCTAGGAAAAAGTCTATCGTAGTTCTGAAGTTGGATCTGAAGTTGAAAGAGAACAAGATGAAACACGGATCCAATAAAGAGAACAACTTGCAGAAACCCCAGTCCAAAATTACGGTACAATTAGTTTGTTATAACAGCTGTAACAAAACTAGGCATATAGCTAGAATTTTTAGAAACGAGAATCGTCCTGTTGCGCTAGCAAACCTGGTAGAAGAAGATTTAGTAGCTATGATCACAGAAGTAAATGTGATCGGGGGGTCTGTAGGTTGGTGGCTAGACACTGGTACATCTCGCCACATCTGTCATGACCTTAAATTATTTAGAAAATATAATGAGACTAAGGATAAAAAAATCCTTTTGGGAGAACATCACACAACTAACGTGGCCGATGTTGGAGAAACAGAACTGAAATTCACATATGGCAAGACACTTATGCTGAAGGAAGTTCTACATACTCCTGAAATTTGA

Protein sequence

MDQIINKVGSYWFNQKASKEIDSIGDESHFTLSSFPPFSFPLLIVVDSTYCIAQIKIVEDVPRDVHINFLKVERSLHRQRIHATGEQAVEEGGGVEMHVLEDVGHWVHADNPHGLFRILTFSAVGMDPTIMVVGLAVAILAAIKAVGHESNDIYLFEVKEFLRNPGNGGGFLKLYESNDRPTYRSQHDRIYSLRTMFAAKEVWDVLQKKYETKEARSKTYAVSRYVRYQMIDDRFMEAQSHETQKIAHEIINEGMRLDDQFQVAVIIDKLPPLWKDFKNTLRHKTQEFSLENLIMRLRIEKEARKHDQKEEVNKKYDTKEAGSKTYAVSRYMRYQMKDDIFMEAQSHEIQKIAHKIINEGMRLEDQLQVAVIIDKLPPLWKDFKNTLRHKTQEFSLESLIMRLRIEKEARKHDQKEEVNVIPRKKSIVVLKLDLKLKENKMKHGSNKENNLQKPQSKITVQLVCYNSCNKTRHIARIFRNENRPVALANLVEEDLVAMITEVNVIGGSVGWWLDTGTSRHICHDLKLFRKYNETKDKKILLGEHHTTNVADVGETELKFTYGKTLMLKEVLHTPEI

Homology

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BLAST of IVF0000894 vs. ExPASy Swiss-Prot
Match: Q8LF48 (3-ketoacyl-CoA thiolase 1, peroxisomal OS=Arabidopsis thaliana OX=3702 GN=KAT1 PE=1 SV=2)

HSP 1 Score: 55.8 bits (133), Expect = 1.8e-06
Identity = 31/47 (65.96%), Postives = 36/47 (76.60%), Query Frame = 0


Query: 114 GLFRILTFSAVGMDPTIMVVGLAVAILAAIKAVGHESNDIYLFEVKE 161
           G+FR  TFSAVG+DP IM VG AVAI AA+KA G E ND+ LFE+ E
Sbjct: 310 GVFR--TFSAVGVDPAIMGVGPAVAIPAAVKAAGLELNDVDLFEINE 354

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BLAST of IVF0000894 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 4.1e-06
Identity = 55/278 (19.78%), Postives = 116/278 (41.73%), Query Frame = 0


Query: 316 YDTKEAGSKTYAVSRYMRYQMKDDIFMEAQSHEIQKIAHKIINEGMRLEDQLQVAVIIDK 375
           Y +K   +K Y   +     M +     +  +    +  ++ N G+++E++ +  ++++ 
Sbjct: 92  YMSKTLTNKLYLKKQLYALHMSEGTNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLNS 151

Query: 376 LPPLWKDFKNTLRHKTQEFSLESLIMRLRIEKEARKHDQKEEVNVIPRKKSIVVLKLDLK 435
           LP  + +   T+ H      L+ +   L + ++ RK  + +   +I   +          
Sbjct: 152 LPSSYDNLATTILHGKTTIELKDVTSALLLNEKMRKKPENQGQALITEGRG-------RS 211

Query: 436 LKENKMKHGSNKENNLQKPQSKITVQLVCYNSCNKTRHIARIF-------------RNEN 495
            + +   +G +      K +SK  V+  CYN CN+  H  R               +N++
Sbjct: 212 YQRSSNNYGRSGARGKSKNRSKSRVR-NCYN-CNQPGHFKRDCPNPRKGKGETSGQKNDD 271

Query: 496 RPVALANLVEEDLVAMITE----VNVIGGSVGWWLDTGTSRHICHDLKLFRKYNETKDKK 555
              A+     +++V  I E    +++ G    W +DT  S H      LF +Y       
Sbjct: 272 NTAAMVQ-NNDNVVLFINEEEECMHLSGPESEWVVDTAASHHATPVRDLFCRYVAGDFGT 331

Query: 556 ILLGEHHTTNVADVGETELKFTYGKTLMLKEVLHTPEI 577
           + +G    + +A +G+  +K   G TL+LK+V H P++
Sbjct: 332 VKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDL 359

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BLAST of IVF0000894 vs. ExPASy Swiss-Prot
Match: Q56WD9 (3-ketoacyl-CoA thiolase 2, peroxisomal OS=Arabidopsis thaliana OX=3702 GN=PED1 PE=1 SV=2)

HSP 1 Score: 52.8 bits (125), Expect = 1.5e-05
Identity = 29/47 (61.70%), Postives = 36/47 (76.60%), Query Frame = 0


Query: 114 GLFRILTFSAVGMDPTIMVVGLAVAILAAIKAVGHESNDIYLFEVKE 161
           G+FR  TF+AVG+DP IM +G AVAI AA+KA G E +DI LFE+ E
Sbjct: 318 GVFR--TFAAVGVDPAIMGIGPAVAIPAAVKAAGLELDDIDLFEINE 362

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BLAST of IVF0000894 vs. ExPASy TrEMBL
Match: A0A5D3DE53 (Putative Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold543G00070 PE=4 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 1.2e-133
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0


Query: 332 MRYQMKDDIFMEAQSHEIQKIAHKIINEGMRLEDQLQVAVIIDKLPPLWKDFKNTLRHKT 391
           MRYQMKDDIFMEAQSHEIQKIAHKIINEGMRLEDQLQVAVIIDKLPPLWKDFKNTLRHKT
Sbjct: 1   MRYQMKDDIFMEAQSHEIQKIAHKIINEGMRLEDQLQVAVIIDKLPPLWKDFKNTLRHKT 60

Query: 392 QEFSLESLIMRLRIEKEARKHDQKEEVNVIPRKKSIVVLKLDLKLKENKMKHGSNKENNL 451
           QEFSLESLIMRLRIEKEARKHDQKEEVNVIPRKKSIVVLKLDLKLKENKMKHGSNKENNL
Sbjct: 61  QEFSLESLIMRLRIEKEARKHDQKEEVNVIPRKKSIVVLKLDLKLKENKMKHGSNKENNL 120

Query: 452 QKPQSKITVQLVCYNSCNKTRHIARIFRNENRPVALANLVEEDLVAMITEVNVIGGSVGW 511
           QKPQSKITVQLVCYNSCNKTRHIARIFRNENRPVALANLVEEDLVAMITEVNVIGGSVGW
Sbjct: 121 QKPQSKITVQLVCYNSCNKTRHIARIFRNENRPVALANLVEEDLVAMITEVNVIGGSVGW 180

Query: 512 WLDTGTSRHICHDLKLFRKYNETKDKKILLGEHHTTNVADVGETELKFTYGKTLMLKEVL 571
           WLDTGTSRHICHDLKLFRKYNETKDKKILLGEHHTTNVADVGETELKFTYGKTLMLKEVL
Sbjct: 181 WLDTGTSRHICHDLKLFRKYNETKDKKILLGEHHTTNVADVGETELKFTYGKTLMLKEVL 240

Query: 572 HTPEI 577
           HTPEI
Sbjct: 241 HTPEI 245

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BLAST of IVF0000894 vs. ExPASy TrEMBL
Match: A0A5A7VQD4 (Putative Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G00810 PE=4 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 4.1e-102
Identity = 194/267 (72.66%), Postives = 221/267 (82.77%), Query Frame = 0


Query: 310 EEVNKKYDTKEAGSKTYAVSRYMRYQMKDDIFMEAQSHEIQKIAHKIINEGMRLEDQLQV 369
           + + KKYDT+EA  K YA+S+Y+RYQM D+ F+EAQSHEIQKIAH+II+EGM L+DQ QV
Sbjct: 9   DTLQKKYDTEEARLKKYAISQYLRYQMTDEKFVEAQSHEIQKIAHEIISEGMPLDDQFQV 68

Query: 370 AVIIDKLPPLWKDFKNTLRHKTQEFSLESLIMRLRIEKEARKHDQKEEVNVIPRKKSIVV 429
           AVIIDKLPPLWKDFKNTLRHKT+EF LESLI RL IE+E RKHD+KEEVN IP+KK  VV
Sbjct: 69  AVIIDKLPPLWKDFKNTLRHKTKEFLLESLITRLMIEEEVRKHDKKEEVNAIPKKKPTVV 128

Query: 430 LKLDLKLKENKMKHGSNKENNLQKPQSKITVQLVCYNSCNKTRHIARIFRNENRPVALAN 489
           LK DLK K NKMK GSNK+NN   PQSK TVQ+VCYN CNK  H+AR  RN + PVA AN
Sbjct: 129 LKSDLKPKGNKMKRGSNKQNN---PQSKSTVQIVCYN-CNKLGHLARNCRNRSHPVAQAN 188

Query: 490 LVEEDLVAMITEVNVIGGSVGWWLDTGTSRHICHDLKLFRKYNETKDKKILLGEHHTTNV 549
           L+E +LVAMI EVNVIGGS GWWLDTG   H+CHDL LFRKYNE KDK ILLG+HHTT V
Sbjct: 189 LIENELVAMIFEVNVIGGSEGWWLDTGAFPHVCHDLSLFRKYNEVKDKNILLGDHHTTKV 248

Query: 550 ADVGETELKFTYGKTLMLKEVLHTPEI 577
            D+GE ELKFT+ K L+LKEVLHTP+I
Sbjct: 249 IDIGEVELKFTFDKMLVLKEVLHTPKI 271

[Close]

BLAST of IVF0000894 vs. ExPASy TrEMBL
Match: A0A5D3DCJ1 (Putative Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1199G00010 PE=4 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 4.4e-88
Identity = 172/241 (71.37%), Postives = 198/241 (82.16%), Query Frame = 0


Query: 336 MKDDIFMEAQSHEIQKIAHKIINEGMRLEDQLQVAVIIDKLPPLWKDFKNTLRHKTQEFS 395
           M DD  +EAQSHEIQKIAH+IINEGM L DQ QVAVIIDKLP LWKDFKNTLRHKT+EFS
Sbjct: 1   MTDDKSVEAQSHEIQKIAHEIINEGMPL-DQFQVAVIIDKLPLLWKDFKNTLRHKTKEFS 60

Query: 396 LESLIMRLRIEKEARKHDQKEEVNVIPRKKSIVVLKLDLKLKENKMKHGSNKENNLQKPQ 455
           LES+I RL+IE+E RKHD+KEEVN IPRKK   +LK +LK K NKMK GSNK+NNL   Q
Sbjct: 61  LESVITRLKIEEEGRKHDKKEEVNAIPRKKPTAILKPNLKSKGNKMKRGSNKQNNL---Q 120

Query: 456 SKITVQLVCYNSCNKTRHIARIFRNENRPVALANLVEEDLVAMITEVNVIGGSVGWWLDT 515
           S+ TVQ+ CYN CNK  H+A+  RN +RP A ANL+E++LVAMI++VNVIGGS GWWLDT
Sbjct: 121 SRSTVQIFCYN-CNKPGHLAKNCRNRSRPAAQANLIEDELVAMISKVNVIGGSEGWWLDT 180

Query: 516 GTSRHICHDLKLFRKYNETKDKKILLGEHHTTNVADVGETELKFTYGKTLMLKEVLHTPE 575
           G S H+CH+L LFRKYNE KDK ILLG+HHTT V  +GE ELKFT  KTL++KE LHTPE
Sbjct: 181 GASHHVCHELSLFRKYNEVKDKNILLGDHHTTKVVGIGEVELKFTSDKTLVVKEGLHTPE 236

Query: 576 I 577
           I
Sbjct: 241 I 236

[Close]

BLAST of IVF0000894 vs. ExPASy TrEMBL
Match: A0A5A7UA92 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1166G00260 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 1.4e-86
Identity = 174/267 (65.17%), Postives = 200/267 (74.91%), Query Frame = 0


Query: 310 EEVNKKYDTKEAGSKTYAVSRYMRYQMKDDIFMEAQSHEIQKIAHKIINEGMRLEDQLQV 369
           E + KKYDT+EAGSK YAVSRY+RYQM DD  +EAQSHEIQKIAH+IINEGM L+DQ QV
Sbjct: 98  EALQKKYDTEEAGSKKYAVSRYLRYQMTDDRSVEAQSHEIQKIAHEIINEGMPLDDQFQV 157

Query: 370 AVIIDKLPPLWKDFKNTLRHKTQEFSLESLIMRLRIEKEARKHDQKEEVNVIPRKKSIVV 429
            +IIDKL  LWKDFKNTLRHKT+EFSLE+L  RLRIE+EA+KHD+KEEVN IPRKK   V
Sbjct: 158 TIIIDKLLLLWKDFKNTLRHKTKEFSLENLTTRLRIEEEAKKHDKKEEVNAIPRKKFTAV 217

Query: 430 LKLDLKLKENKMKHGSNKENNLQKPQSKITVQLVCYNSCNKTRHIARIFRNENRPVALAN 489
           LK DLK K NKMK G NK+NN   PQS                             ++AN
Sbjct: 218 LKSDLKPKGNKMKQGFNKQNN---PQS----------------------------TSMAN 277

Query: 490 LVEEDLVAMITEVNVIGGSVGWWLDTGTSRHICHDLKLFRKYNETKDKKILLGEHHTTNV 549
           L+E +LVAMI+EVNVIGGS GWWLDTG SRH+CHDL +FRKYNE KDK ILLG+HH T V
Sbjct: 278 LIENELVAMISEVNVIGGSEGWWLDTGASRHVCHDLSIFRKYNEVKDKNILLGDHHITKV 333

Query: 550 ADVGETELKFTYGKTLMLKEVLHTPEI 577
             + E ELKFT GKTL++K+VLHTP+I
Sbjct: 338 VGIEEVELKFTSGKTLVMKKVLHTPKI 333

[Close]

BLAST of IVF0000894 vs. ExPASy TrEMBL
Match: A0A5A7TG34 (Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00910 PE=4 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 2.0e-85
Identity = 173/267 (64.79%), Postives = 195/267 (73.03%), Query Frame = 0


Query: 310 EEVNKKYDTKEAGSKTYAVSRYMRYQMKDDIFMEAQSHEIQKIAHKIINEGMRLEDQLQV 369
           + + KKYDT+EAGSK Y V+RY+RY+M DD  MEAQSHEIQKIAH+II+EGM L+DQ QV
Sbjct: 37  DALQKKYDTEEAGSKKYNVNRYLRYRMADDKSMEAQSHEIQKIAHEIISEGMPLDDQFQV 96

Query: 370 AVIIDKLPPLWKDFKNTLRHKTQEFSLESLIMRLRIEKEARKHDQKEEVNVIPRKKSIVV 429
            VIIDKLPPLWKDFKNTLRHKT+EFSLESLI RLRIE+EARKHD+KEEVN IPRKK   +
Sbjct: 97  VVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIEEEARKHDKKEEVNAIPRKKPTTI 156

Query: 430 LKLDLKLKENKMKHGSNKENNLQKPQSKITVQLVCYNSCNKTRHIARIFRNENRPVALAN 489
           LK DLKLK NKMK G                                   N + P A AN
Sbjct: 157 LKPDLKLKGNKMKRG-----------------------------------NRSCPTAQAN 216

Query: 490 LVEEDLVAMITEVNVIGGSVGWWLDTGTSRHICHDLKLFRKYNETKDKKILLGEHHTTNV 549
           L+E++LVAMI+EVNVIG S GWWLDTG S H+ HDL LFRKYNE KDK ILLG+HHTT V
Sbjct: 217 LIEDELVAMISEVNVIGESEGWWLDTGASHHVFHDLSLFRKYNEVKDKNILLGDHHTTKV 268

Query: 550 ADVGETELKFTYGKTLMLKEVLHTPEI 577
             +GE ELKFT  KTL+LKEVLHT EI
Sbjct: 277 IGIGEVELKFTSDKTLVLKEVLHTSEI 268

[Close]

BLAST of IVF0000894 vs. NCBI nr
Match: TYK21961.1 (putative Polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 484 bits (1247), Expect = 4.12e-167
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0


Query: 332 MRYQMKDDIFMEAQSHEIQKIAHKIINEGMRLEDQLQVAVIIDKLPPLWKDFKNTLRHKT 391
           MRYQMKDDIFMEAQSHEIQKIAHKIINEGMRLEDQLQVAVIIDKLPPLWKDFKNTLRHKT
Sbjct: 1   MRYQMKDDIFMEAQSHEIQKIAHKIINEGMRLEDQLQVAVIIDKLPPLWKDFKNTLRHKT 60

Query: 392 QEFSLESLIMRLRIEKEARKHDQKEEVNVIPRKKSIVVLKLDLKLKENKMKHGSNKENNL 451
           QEFSLESLIMRLRIEKEARKHDQKEEVNVIPRKKSIVVLKLDLKLKENKMKHGSNKENNL
Sbjct: 61  QEFSLESLIMRLRIEKEARKHDQKEEVNVIPRKKSIVVLKLDLKLKENKMKHGSNKENNL 120

Query: 452 QKPQSKITVQLVCYNSCNKTRHIARIFRNENRPVALANLVEEDLVAMITEVNVIGGSVGW 511
           QKPQSKITVQLVCYNSCNKTRHIARIFRNENRPVALANLVEEDLVAMITEVNVIGGSVGW
Sbjct: 121 QKPQSKITVQLVCYNSCNKTRHIARIFRNENRPVALANLVEEDLVAMITEVNVIGGSVGW 180

Query: 512 WLDTGTSRHICHDLKLFRKYNETKDKKILLGEHHTTNVADVGETELKFTYGKTLMLKEVL 571
           WLDTGTSRHICHDLKLFRKYNETKDKKILLGEHHTTNVADVGETELKFTYGKTLMLKEVL
Sbjct: 181 WLDTGTSRHICHDLKLFRKYNETKDKKILLGEHHTTNVADVGETELKFTYGKTLMLKEVL 240

Query: 572 HTPEI 576
           HTPEI
Sbjct: 241 HTPEI 245

[Close]

BLAST of IVF0000894 vs. NCBI nr
Match: KAA0067915.1 (putative Polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 379 bits (974), Expect = 2.88e-124
Identity = 194/265 (73.21%), Postives = 220/265 (83.02%), Query Frame = 0


Query: 312 VNKKYDTKEAGSKTYAVSRYMRYQMKDDIFMEAQSHEIQKIAHKIINEGMRLEDQLQVAV 371
           + KKYDT+EA  K YA+S+Y+RYQM D+ F+EAQSHEIQKIAH+II+EGM L+DQ QVAV
Sbjct: 11  LQKKYDTEEARLKKYAISQYLRYQMTDEKFVEAQSHEIQKIAHEIISEGMPLDDQFQVAV 70

Query: 372 IIDKLPPLWKDFKNTLRHKTQEFSLESLIMRLRIEKEARKHDQKEEVNVIPRKKSIVVLK 431
           IIDKLPPLWKDFKNTLRHKT+EF LESLI RL IE+E RKHD+KEEVN IP+KK  VVLK
Sbjct: 71  IIDKLPPLWKDFKNTLRHKTKEFLLESLITRLMIEEEVRKHDKKEEVNAIPKKKPTVVLK 130

Query: 432 LDLKLKENKMKHGSNKENNLQKPQSKITVQLVCYNSCNKTRHIARIFRNENRPVALANLV 491
            DLK K NKMK GSNK+NN   PQSK TVQ+VCYN CNK  H+AR  RN + PVA ANL+
Sbjct: 131 SDLKPKGNKMKRGSNKQNN---PQSKSTVQIVCYN-CNKLGHLARNCRNRSHPVAQANLI 190

Query: 492 EEDLVAMITEVNVIGGSVGWWLDTGTSRHICHDLKLFRKYNETKDKKILLGEHHTTNVAD 551
           E +LVAMI EVNVIGGS GWWLDTG   H+CHDL LFRKYNE KDK ILLG+HHTT V D
Sbjct: 191 ENELVAMIFEVNVIGGSEGWWLDTGAFPHVCHDLSLFRKYNEVKDKNILLGDHHTTKVID 250

Query: 552 VGETELKFTYGKTLMLKEVLHTPEI 576
           +GE ELKFT+ K L+LKEVLHTP+I
Sbjct: 251 IGEVELKFTFDKMLVLKEVLHTPKI 271

[Close]

BLAST of IVF0000894 vs. NCBI nr
Match: KAA0042384.1 (pol polyprotein [Cucumis melo var. makuwa] >TYK15502.1 pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 325 bits (832), Expect = 3.98e-103
Identity = 173/265 (65.28%), Postives = 194/265 (73.21%), Query Frame = 0


Query: 312 VNKKYDTKEAGSKTYAVSRYMRYQMKDDIFMEAQSHEIQKIAHKIINEGMRLEDQLQVAV 371
           + KKYDT+EAGSK Y V+RY+RY+M DD  MEAQSHEIQKIAH+II+EGM L+DQ QV V
Sbjct: 39  LQKKYDTEEAGSKKYNVNRYLRYRMADDKSMEAQSHEIQKIAHEIISEGMPLDDQFQVVV 98

Query: 372 IIDKLPPLWKDFKNTLRHKTQEFSLESLIMRLRIEKEARKHDQKEEVNVIPRKKSIVVLK 431
           IIDKLPPLWKDFKNTLRHKT+EFSLESLI RLRIE+EARKHD+KEEVN IPRKK   +LK
Sbjct: 99  IIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIEEEARKHDKKEEVNAIPRKKPTTILK 158

Query: 432 LDLKLKENKMKHGSNKENNLQKPQSKITVQLVCYNSCNKTRHIARIFRNENRPVALANLV 491
            DLKLK NKMK G                                   N + P A ANL+
Sbjct: 159 PDLKLKGNKMKRG-----------------------------------NRSCPTAQANLI 218

Query: 492 EEDLVAMITEVNVIGGSVGWWLDTGTSRHICHDLKLFRKYNETKDKKILLGEHHTTNVAD 551
           E++LVAMI+EVNVIG S GWWLDTG S H+ HDL LFRKYNE KDK ILLG+HHTT V  
Sbjct: 219 EDELVAMISEVNVIGESEGWWLDTGASHHVFHDLSLFRKYNEVKDKNILLGDHHTTKVIG 268

Query: 552 VGETELKFTYGKTLMLKEVLHTPEI 576
           +GE ELKFT  KTL+LKEVLHT EI
Sbjct: 279 IGEVELKFTSDKTLVLKEVLHTSEI 268

[Close]

BLAST of IVF0000894 vs. NCBI nr
Match: KAA0050409.1 (hypothetical protein E6C27_scaffold1166G00260 [Cucumis melo var. makuwa])

HSP 1 Score: 328 bits (840), Expect = 1.06e-101
Identity = 174/267 (65.17%), Postives = 200/267 (74.91%), Query Frame = 0


Query: 310 EEVNKKYDTKEAGSKTYAVSRYMRYQMKDDIFMEAQSHEIQKIAHKIINEGMRLEDQLQV 369
           E + KKYDT+EAGSK YAVSRY+RYQM DD  +EAQSHEIQKIAH+IINEGM L+DQ QV
Sbjct: 98  EALQKKYDTEEAGSKKYAVSRYLRYQMTDDRSVEAQSHEIQKIAHEIINEGMPLDDQFQV 157

Query: 370 AVIIDKLPPLWKDFKNTLRHKTQEFSLESLIMRLRIEKEARKHDQKEEVNVIPRKKSIVV 429
            +IIDKL  LWKDFKNTLRHKT+EFSLE+L  RLRIE+EA+KHD+KEEVN IPRKK   V
Sbjct: 158 TIIIDKLLLLWKDFKNTLRHKTKEFSLENLTTRLRIEEEAKKHDKKEEVNAIPRKKFTAV 217

Query: 430 LKLDLKLKENKMKHGSNKENNLQKPQSKITVQLVCYNSCNKTRHIARIFRNENRPVALAN 489
           LK DLK K NKMK G NK+NN   PQS                             ++AN
Sbjct: 218 LKSDLKPKGNKMKQGFNKQNN---PQS----------------------------TSMAN 277

Query: 490 LVEEDLVAMITEVNVIGGSVGWWLDTGTSRHICHDLKLFRKYNETKDKKILLGEHHTTNV 549
           L+E +LVAMI+EVNVIGGS GWWLDTG SRH+CHDL +FRKYNE KDK ILLG+HH T V
Sbjct: 278 LIENELVAMISEVNVIGGSEGWWLDTGASRHVCHDLSIFRKYNEVKDKNILLGDHHITKV 333

Query: 550 ADVGETELKFTYGKTLMLKEVLHTPEI 576
             + E ELKFT GKTL++K+VLHTP+I
Sbjct: 338 VGIEEVELKFTSGKTLVMKKVLHTPKI 333

[Close]

BLAST of IVF0000894 vs. NCBI nr
Match: KAA0034938.1 (putative Polyprotein [Cucumis melo var. makuwa] >TYK21293.1 putative Polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 333 bits (853), Expect = 7.02e-100
Identity = 172/241 (71.37%), Postives = 198/241 (82.16%), Query Frame = 0


Query: 336 MKDDIFMEAQSHEIQKIAHKIINEGMRLEDQLQVAVIIDKLPPLWKDFKNTLRHKTQEFS 395
           M DD  +EAQSHEIQKIAH+IINEGM L DQ QVAVIIDKLP LWKDFKNTLRHKT+EFS
Sbjct: 1   MTDDKSVEAQSHEIQKIAHEIINEGMPL-DQFQVAVIIDKLPLLWKDFKNTLRHKTKEFS 60

Query: 396 LESLIMRLRIEKEARKHDQKEEVNVIPRKKSIVVLKLDLKLKENKMKHGSNKENNLQKPQ 455
           LES+I RL+IE+E RKHD+KEEVN IPRKK   +LK +LK K NKMK GSNK+NNLQ   
Sbjct: 61  LESVITRLKIEEEGRKHDKKEEVNAIPRKKPTAILKPNLKSKGNKMKRGSNKQNNLQ--- 120

Query: 456 SKITVQLVCYNSCNKTRHIARIFRNENRPVALANLVEEDLVAMITEVNVIGGSVGWWLDT 515
           S+ TVQ+ CYN CNK  H+A+  RN +RP A ANL+E++LVAMI++VNVIGGS GWWLDT
Sbjct: 121 SRSTVQIFCYN-CNKPGHLAKNCRNRSRPAAQANLIEDELVAMISKVNVIGGSEGWWLDT 180

Query: 516 GTSRHICHDLKLFRKYNETKDKKILLGEHHTTNVADVGETELKFTYGKTLMLKEVLHTPE 575
           G S H+CH+L LFRKYNE KDK ILLG+HHTT V  +GE ELKFT  KTL++KE LHTPE
Sbjct: 181 GASHHVCHELSLFRKYNEVKDKNILLGDHHTTKVVGIGEVELKFTSDKTLVVKEGLHTPE 236

[Close]

BLAST of IVF0000894 vs. TAIR 10
Match: AT4G10030.1 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 103.6 bits (257), Expect = 5.4e-22
Identity = 51/71 (71.83%), Postives = 55/71 (77.46%), Query Frame = 0


Query: 58  VEDVPRDVHINFLKVERSLHR------QRIHATGEQAVEEGGGVEMHVLEDVGHWVHADN 117
           VE++PR VH+NFLK ERSLHR      QRIHA  E A EEGGGVEMHVLED GHWVH DN
Sbjct: 304 VENLPRGVHVNFLKAERSLHRWALEDLQRIHAAEELASEEGGGVEMHVLEDAGHWVHTDN 363

Query: 118 PHGLFRILTFS 123
           P GLFRIL+ S
Sbjct: 364 PDGLFRILSSS 374

[Close]

BLAST of IVF0000894 vs. TAIR 10
Match: AT4G00980.1 (zinc knuckle (CCHC-type) family protein )

HSP 1 Score: 67.4 bits (163), Expect = 4.3e-11
Identity = 38/111 (34.23%), Postives = 65/111 (58.56%), Query Frame = 0


Query: 199 AKEVWDVLQKKYETKEARSKTYAVSRYVRYQMIDDRFMEAQSHETQKIAHEIINEGMRLD 258
           AKE+WD L+  Y+  E++SK   V +Y+ ++M+++R +  Q     KIA  I++ GM LD
Sbjct: 283 AKELWDELKWVYQCDESKSKRSQVRKYIEFRMVEERPILEQVQVFNKIADSIVSAGMFLD 342

Query: 259 DQFQVAVIIDKLPPLWKDFKNTLRHKTQEFSLENLIMRLRIEKEARKHDQK 310
           + F V+ II K PP W+ F   L  + +   +  L+ R++ E+E  ++  K
Sbjct: 343 EAFHVSTIISKFPPSWRGFCTRLMEE-EYLPVWMLMERVKAEEELLRNGAK 392

[Close]

BLAST of IVF0000894 vs. TAIR 10
Match: AT1G04710.1 (peroxisomal 3-ketoacyl-CoA thiolase 4 )

HSP 1 Score: 55.8 bits (133), Expect = 1.3e-07
Identity = 31/47 (65.96%), Postives = 36/47 (76.60%), Query Frame = 0


Query: 114 GLFRILTFSAVGMDPTIMVVGLAVAILAAIKAVGHESNDIYLFEVKE 161
           G+FR  TFSAVG+DP IM VG AVAI AA+KA G E ND+ LFE+ E
Sbjct: 310 GVFR--TFSAVGVDPAIMGVGPAVAIPAAVKAAGLELNDVDLFEINE 354

[Close]

BLAST of IVF0000894 vs. TAIR 10
Match: AT2G33150.1 (peroxisomal 3-ketoacyl-CoA thiolase 3 )

HSP 1 Score: 52.8 bits (125), Expect = 1.1e-06
Identity = 29/47 (61.70%), Postives = 36/47 (76.60%), Query Frame = 0


Query: 114 GLFRILTFSAVGMDPTIMVVGLAVAILAAIKAVGHESNDIYLFEVKE 161
           G+FR  TF+AVG+DP IM +G AVAI AA+KA G E +DI LFE+ E
Sbjct: 318 GVFR--TFAAVGVDPAIMGIGPAVAIPAAVKAAGLELDDIDLFEINE 362

[Close]

BLAST of IVF0000894 vs. TAIR 10
Match: AT3G08890.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 48.5 bits (114), Expect = 2.1e-05
Identity = 20/34 (58.82%), Postives = 28/34 (82.35%), Query Frame = 0


Query: 1  MDQIINKVGSYWFNQKASKEIDSIGDESHFTLSS 35
          MDQI+NKVGSYW  +KA+K++DS+GD+ +   SS
Sbjct: 1  MDQILNKVGSYWLGKKANKQLDSVGDDINSLSSS 34

The following BLAST results are available for this feature:

BLAST of IVF0000894 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LF48	1.8e-06	65.96	3-ketoacyl-CoA thiolase 1, peroxisomal OS=Arabidopsis thaliana OX=3702 GN=KAT1 P...	[more]
P10978	4.1e-06	19.78	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
Q56WD9	1.5e-05	61.70	3-ketoacyl-CoA thiolase 2, peroxisomal OS=Arabidopsis thaliana OX=3702 GN=PED1 P...	[more]

BLAST of IVF0000894 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DE53	1.2e-133	100.00	Putative Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold543...	[more]
A0A5A7VQD4	4.1e-102	72.66	Putative Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138...	[more]
A0A5D3DCJ1	4.4e-88	71.37	Putative Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119...	[more]
A0A5A7UA92	1.4e-86	65.17	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7TG34	2.0e-85	64.79	Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G0091...	[more]

BLAST of IVF0000894 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK21961.1	4.12e-167	100.00	putative Polyprotein [Cucumis melo var. makuwa]	[more]
KAA0067915.1	2.88e-124	73.21	putative Polyprotein [Cucumis melo var. makuwa]	[more]
KAA0042384.1	3.98e-103	65.28	pol polyprotein [Cucumis melo var. makuwa] >TYK15502.1 pol polyprotein [Cucumis ...	[more]
KAA0050409.1	1.06e-101	65.17	hypothetical protein E6C27_scaffold1166G00260 [Cucumis melo var. makuwa]	[more]
KAA0034938.1	7.02e-100	71.37	putative Polyprotein [Cucumis melo var. makuwa] >TYK21293.1 putative Polyprotein...	[more]

BLAST of IVF0000894 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10030.1	5.4e-22	71.83	alpha/beta-Hydrolases superfamily protein	[more]
AT4G00980.1	4.3e-11	34.23	zinc knuckle (CCHC-type) family protein	[more]
AT1G04710.1	1.3e-07	65.96	peroxisomal 3-ketoacyl-CoA thiolase 4	[more]
AT2G33150.1	1.1e-06	61.70	peroxisomal 3-ketoacyl-CoA thiolase 3	[more]
AT3G08890.1	2.1e-05	58.82	Protein of unknown function, DUF538	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016039	Thiolase-like	GENE3D	3.40.47.10		coord: 119..160 e-value: 4.9E-6 score: 27.7
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 312..412 e-value: 5.9E-11 score: 42.3 coord: 192..306 e-value: 4.8E-15 score: 55.5
None	No IPR available	PANTHER	PTHR47592	PBF68 PROTEIN	coord: 312..454 coord: 195..314
None	No IPR available	PANTHER	PTHR47592:SF14	GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 312..454
None	No IPR available	PANTHER	PTHR47592:SF14	GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 195..314

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0000894.1	IVF0000894.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0016746	acyltransferase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding