IVF0000091 (gene) Melon (IVF77) v1

Overview
NameIVF0000091
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionXanthine/uracil permease family protein
Locationchr06: 21179355 .. 21180761 (-)
RNA-Seq ExpressionIVF0000091
SyntenyIVF0000091
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAACTCAGCCAACTCCAGAATCTGCAGCCACGGCGAGGAGGATCGGTGTGAAGCGACGTTTCACGAGGACCCTAGTTGGAGTACTTCTTCCTCCATGGACGATCTTCTCATGTTCGATGTTCGTAGTACGATTCATTCTTCTTCTTATGAGTTTTTTCAAACCGCCTTTGTTGTTCCTCCGCCGTGGATGGTGGAGCTCAGGCTTCTGCTTCCTCCTTCCGACTGAAACGGAGGAAGATGGCAGCCGATGATGATCTCGAAGATACTGCCACTTCTCCTCCTCATCCTTCCATTGTTTCCAAGGTACTTTCTTTAGCAAATTAATATCACATTTGTGAATAATTTCAGAAGTAATTTAATATAATTCTTTTTATATTTTTCTCTCGAATATATTTACTTTCGTTGTTATCACAAATAATTTAAAAACTTTAAGGCAAAATTTGAAAATCAGTAGCATTTTTCAAAACTAAATATTATTGTTTGCTTTTAGCGTCTTGAGAATTCAAATGTTTTCTAAATGATATGAAAACAACTGTATGAAAGGGTGAGATAACAAATTTCGATATTTTTTTAAAAAAGAGGTTTCTTTAATAACTATTTCGTTCTATTTCTTTTTCTTTTTTTAAATTAAACTTATTGTGATGCATTTTTGTTGAGTAAAAAAAATTGAACTCTTTAGCCAAACTTCAAACAAAATAAGTTTTTTTTTTTTTTTTAATTTCAAAATTTAGCTTGGATTTATCACTTCTAAAATGTTGACAATAAAACATAAAAACCAATAGATAAGATGCAATACTGTTTATGTACTTAATTTTAAAAGACAAAAAAACTAAATGAAATCAAATAAATACAAACAGGAGTTTTAGCATAACAATTGAATGTAAAAATTTAAAATTCGCCCATTTTCGAATAATAATTAAAACTAATAAATATAAACTTGAATTACTTTTCCAAACCTGTCTCACATCAACCCCCTCTAATGATTTTCTTTCCGTTAGGAAAAAAATGCAAGTAGTTTTTATATACAAATATTAACTTGGTGAACTAATTTGGTATTAATCAGATGGATGAGCCTAGTTCTAAGCAACAGAAGAAGCAGAGGGCAACGATCAATCAAACAAAGCACAAGGTTTCTAATATTTATCTAAAAAAATATTTTGAGTTTTGATATTATAATAACATTATTATTTGAGATGCAATATATACAATCTAACTTTGTTTTTGGGGTTATGTTTTATTGTTGTAGGGAAAAGGAAGTGAAGACTATGGGGAGGTTGAAGATAGAATAATTCAAGTGGGTGTTGTGGGGAGGGATAATAATAAGAATTATTGTAGCACAGGACTTAAGAACATTGGTCTTTGTTTAGTTCCTGTATCCATGGCTCTCAATTATTTTGCTTAG

mRNA sequence

ATGGAAAACTCAGCCAACTCCAGAATCTGCAGCCACGGCGAGGAGGATCGGTGTGAAGCGACGTTTCACGAGGACCCTAGTTGGAGTACTTCTTCCTCCATGGACGATCTTCTCATGTTCGATGTTCTTTTTTCAAACCGCCTTTGTTGTTCCTCCGCCGTGGATGGTGGAGCTCAGGCTTCTGCTTCCTCCTTCCGACTGAAACGGAGGAAGATGGCAGCCGATGATGATCTCGAAGATACTGCCACTTCTCCTCCTCATCCTTCCATTGTTTCCAAGATGGATGAGCCTAGTTCTAAGCAACAGAAGAAGCAGAGGGCAACGATCAATCAAACAAAGCACAAGGGAAAAGGAAGTGAAGACTATGGGGAGGTTGAAGATAGAATAATTCAAGTGGGTGTTGTGGGGAGGGATAATAATAAGAATTATTGTAGCACAGGACTTAAGAACATTGGTCTTTGTTTAGTTCCTGTATCCATGGCTCTCAATTATTTTGCTTAG

Coding sequence (CDS)

ATGGAAAACTCAGCCAACTCCAGAATCTGCAGCCACGGCGAGGAGGATCGGTGTGAAGCGACGTTTCACGAGGACCCTAGTTGGAGTACTTCTTCCTCCATGGACGATCTTCTCATGTTCGATGTTCTTTTTTCAAACCGCCTTTGTTGTTCCTCCGCCGTGGATGGTGGAGCTCAGGCTTCTGCTTCCTCCTTCCGACTGAAACGGAGGAAGATGGCAGCCGATGATGATCTCGAAGATACTGCCACTTCTCCTCCTCATCCTTCCATTGTTTCCAAGATGGATGAGCCTAGTTCTAAGCAACAGAAGAAGCAGAGGGCAACGATCAATCAAACAAAGCACAAGGGAAAAGGAAGTGAAGACTATGGGGAGGTTGAAGATAGAATAATTCAAGTGGGTGTTGTGGGGAGGGATAATAATAAGAATTATTGTAGCACAGGACTTAAGAACATTGGTCTTTGTTTAGTTCCTGTATCCATGGCTCTCAATTATTTTGCTTAG

Protein sequence

MENSANSRICSHGEEDRCEATFHEDPSWSTSSSMDDLLMFDVLFSNRLCCSSAVDGGAQASASSFRLKRRKMAADDDLEDTATSPPHPSIVSKMDEPSSKQQKKQRATINQTKHKGKGSEDYGEVEDRIIQVGVVGRDNNKNYCSTGLKNIGLCLVPVSMALNYFA
Homology
BLAST of IVF0000091 vs. ExPASy TrEMBL
Match: A0A5D3BKS2 (Putative CTD small phosphatase-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1112G00160 PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 3.6e-83
Identity = 163/176 (92.61%), Postives = 163/176 (92.61%), Query Frame = 0

Query: 1   MENSANSRICSHGEEDRCEATFHEDPSWSTSSSMDDLLMFDV----------LFSNRLCC 60
           MENSANSRICSHGEEDRCEATFHEDPSWSTSSSMDDLLMFDV           F  RLCC
Sbjct: 1   MENSANSRICSHGEEDRCEATFHEDPSWSTSSSMDDLLMFDVRSTIHSSSYEFFQTRLCC 60

Query: 61  SSAVDGGAQASASSFRLKRRKMAADDDLEDTATSPPHPSIVSKMDEPSSKQQKKQRATIN 120
           SSAVDGGAQASASSFRLKRRKMAADDDLEDTATSPPHPSIVSKMDEPSSKQQKKQRATIN
Sbjct: 61  SSAVDGGAQASASSFRLKRRKMAADDDLEDTATSPPHPSIVSKMDEPSSKQQKKQRATIN 120

Query: 121 QTKHKGKGSEDYGEVEDRIIQVGVVGRDNNKNYCSTGLKNIGLCLVPVSMALNYFA 167
           QTKHKGKGSEDYGEVEDRIIQVGVVGRDNNKNYCSTGLKNIGLCLVPVSMALNYFA
Sbjct: 121 QTKHKGKGSEDYGEVEDRIIQVGVVGRDNNKNYCSTGLKNIGLCLVPVSMALNYFA 176

BLAST of IVF0000091 vs. ExPASy TrEMBL
Match: A0A1S3CKU1 (uncharacterized protein LOC103501601 OS=Cucumis melo OX=3656 GN=LOC103501601 PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 3.6e-83
Identity = 163/176 (92.61%), Postives = 163/176 (92.61%), Query Frame = 0

Query: 1   MENSANSRICSHGEEDRCEATFHEDPSWSTSSSMDDLLMFDV----------LFSNRLCC 60
           MENSANSRICSHGEEDRCEATFHEDPSWSTSSSMDDLLMFDV           F  RLCC
Sbjct: 1   MENSANSRICSHGEEDRCEATFHEDPSWSTSSSMDDLLMFDVRSTIHSSSYEFFQTRLCC 60

Query: 61  SSAVDGGAQASASSFRLKRRKMAADDDLEDTATSPPHPSIVSKMDEPSSKQQKKQRATIN 120
           SSAVDGGAQASASSFRLKRRKMAADDDLEDTATSPPHPSIVSKMDEPSSKQQKKQRATIN
Sbjct: 61  SSAVDGGAQASASSFRLKRRKMAADDDLEDTATSPPHPSIVSKMDEPSSKQQKKQRATIN 120

Query: 121 QTKHKGKGSEDYGEVEDRIIQVGVVGRDNNKNYCSTGLKNIGLCLVPVSMALNYFA 167
           QTKHKGKGSEDYGEVEDRIIQVGVVGRDNNKNYCSTGLKNIGLCLVPVSMALNYFA
Sbjct: 121 QTKHKGKGSEDYGEVEDRIIQVGVVGRDNNKNYCSTGLKNIGLCLVPVSMALNYFA 176

BLAST of IVF0000091 vs. ExPASy TrEMBL
Match: A0A0A0L2F7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G078270 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 2.8e-72
Identity = 147/176 (83.52%), Postives = 150/176 (85.23%), Query Frame = 0

Query: 1   MENSANSRICSHGEEDRCEATFHEDPSWSTSSSMDDLLMFDV----------LFSNRLCC 60
           MENSA SRICSH EED CE  FHED SWSTSSSMDDLLMFDV           F   LCC
Sbjct: 1   MENSATSRICSHREEDTCEPMFHEDRSWSTSSSMDDLLMFDVRTTTHSSSYESFQTSLCC 60

Query: 61  SSAVDGGAQASASSFRLKRRKMAADDDLEDTATSPPHPSIVSKMDEPSSKQQKKQRATIN 120
           SSAVDGGAQ SASSFRLKRRKMAADDDLEDTATSPPHPSIVSKMDE SSKQQKKQRA +N
Sbjct: 61  SSAVDGGAQPSASSFRLKRRKMAADDDLEDTATSPPHPSIVSKMDERSSKQQKKQRAMMN 120

Query: 121 QTKHKGKGSEDYGEVEDRIIQVGVVGRDNNKNYCSTGLKNIGLCLVPVSMALNYFA 167
           QTKHKG GSEDYGEVEDRI +VG VGRDNNKN+CSTGLKNIGLCLVPVSMALNYFA
Sbjct: 121 QTKHKGNGSEDYGEVEDRITEVGFVGRDNNKNHCSTGLKNIGLCLVPVSMALNYFA 176

BLAST of IVF0000091 vs. ExPASy TrEMBL
Match: A0A5A7V6T3 (Xan_ur_permease domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold749G00650 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 1.4e-31
Identity = 76/91 (83.52%), Postives = 77/91 (84.62%), Query Frame = 0

Query: 13  GEEDRCEATFHEDPSWSTSSSMDDLLMFDV----------LFSNRLCCSSAVDGGAQASA 72
           GEEDRCEATFHEDPSWSTSSSMDDLLMFDV           F  RLCCSSAVDGGAQ SA
Sbjct: 114 GEEDRCEATFHEDPSWSTSSSMDDLLMFDVRSTIHSSSYEFFQTRLCCSSAVDGGAQPSA 173

Query: 73  SSFRLKRRKMAADDDLEDTATSPPHPSIVSK 94
           SSFRLK+RKMAADDDLEDTATSPPHPSIVSK
Sbjct: 174 SSFRLKQRKMAADDDLEDTATSPPHPSIVSK 204

BLAST of IVF0000091 vs. ExPASy TrEMBL
Match: A0A5D3CUV3 (Putative nucleobase-ascorbate transporter 10 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold692G00660 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 1.4e-31
Identity = 76/91 (83.52%), Postives = 77/91 (84.62%), Query Frame = 0

Query: 13  GEEDRCEATFHEDPSWSTSSSMDDLLMFDV----------LFSNRLCCSSAVDGGAQASA 72
           GEEDRCEATFHEDPSWSTSSSMDDLLMFDV           F  RLCCSSAVDGGAQ SA
Sbjct: 114 GEEDRCEATFHEDPSWSTSSSMDDLLMFDVRSTIHSSSYEFFQTRLCCSSAVDGGAQPSA 173

Query: 73  SSFRLKRRKMAADDDLEDTATSPPHPSIVSK 94
           SSFRLK+RKMAADDDLEDTATSPPHPSIVSK
Sbjct: 174 SSFRLKQRKMAADDDLEDTATSPPHPSIVSK 204

BLAST of IVF0000091 vs. NCBI nr
Match: XP_008463437.1 (PREDICTED: uncharacterized protein LOC103501601 [Cucumis melo] >TYK00353.1 putative CTD small phosphatase-like protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 316 bits (809), Expect = 3.42e-108
Identity = 163/176 (92.61%), Postives = 163/176 (92.61%), Query Frame = 0

Query: 1   MENSANSRICSHGEEDRCEATFHEDPSWSTSSSMDDLLMFDV----------LFSNRLCC 60
           MENSANSRICSHGEEDRCEATFHEDPSWSTSSSMDDLLMFDV           F  RLCC
Sbjct: 1   MENSANSRICSHGEEDRCEATFHEDPSWSTSSSMDDLLMFDVRSTIHSSSYEFFQTRLCC 60

Query: 61  SSAVDGGAQASASSFRLKRRKMAADDDLEDTATSPPHPSIVSKMDEPSSKQQKKQRATIN 120
           SSAVDGGAQASASSFRLKRRKMAADDDLEDTATSPPHPSIVSKMDEPSSKQQKKQRATIN
Sbjct: 61  SSAVDGGAQASASSFRLKRRKMAADDDLEDTATSPPHPSIVSKMDEPSSKQQKKQRATIN 120

Query: 121 QTKHKGKGSEDYGEVEDRIIQVGVVGRDNNKNYCSTGLKNIGLCLVPVSMALNYFA 166
           QTKHKGKGSEDYGEVEDRIIQVGVVGRDNNKNYCSTGLKNIGLCLVPVSMALNYFA
Sbjct: 121 QTKHKGKGSEDYGEVEDRIIQVGVVGRDNNKNYCSTGLKNIGLCLVPVSMALNYFA 176

BLAST of IVF0000091 vs. NCBI nr
Match: XP_011652737.2 (uncharacterized protein LOC105435073 [Cucumis sativus] >KGN56145.1 hypothetical protein Csa_009500 [Cucumis sativus])

HSP 1 Score: 280 bits (715), Expect = 7.28e-94
Identity = 147/176 (83.52%), Postives = 150/176 (85.23%), Query Frame = 0

Query: 1   MENSANSRICSHGEEDRCEATFHEDPSWSTSSSMDDLLMFDVL----------FSNRLCC 60
           MENSA SRICSH EED CE  FHED SWSTSSSMDDLLMFDV           F   LCC
Sbjct: 1   MENSATSRICSHREEDTCEPMFHEDRSWSTSSSMDDLLMFDVRTTTHSSSYESFQTSLCC 60

Query: 61  SSAVDGGAQASASSFRLKRRKMAADDDLEDTATSPPHPSIVSKMDEPSSKQQKKQRATIN 120
           SSAVDGGAQ SASSFRLKRRKMAADDDLEDTATSPPHPSIVSKMDE SSKQQKKQRA +N
Sbjct: 61  SSAVDGGAQPSASSFRLKRRKMAADDDLEDTATSPPHPSIVSKMDERSSKQQKKQRAMMN 120

Query: 121 QTKHKGKGSEDYGEVEDRIIQVGVVGRDNNKNYCSTGLKNIGLCLVPVSMALNYFA 166
           QTKHKG GSEDYGEVEDRI +VG VGRDNNKN+CSTGLKNIGLCLVPVSMALNYFA
Sbjct: 121 QTKHKGNGSEDYGEVEDRITEVGFVGRDNNKNHCSTGLKNIGLCLVPVSMALNYFA 176

BLAST of IVF0000091 vs. NCBI nr
Match: KAG7031402.1 (hypothetical protein SDJN02_05442, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 144 bits (363), Expect = 9.26e-41
Identity = 96/170 (56.47%), Postives = 113/170 (66.47%), Query Frame = 0

Query: 1   MENSANSRICSHGEEDRCEATFHEDPSWSTSSSMDDLLMFDVLFSNRLCCSSAVDGGAQA 60
           MENSA SRIC+  + D       +  SW+  SSMDDLL+FD    +    S  +   A  
Sbjct: 1   MENSAISRICTQKQVDE------DHSSWT--SSMDDLLLFD----HSKTISYHIQNAAVF 60

Query: 61  SASSFRLKRRKMAADDDLEDTATSPPHPSIVSKMDEPSSKQQKKQR-----ATINQTKHK 120
           S+S           DDDL+DTATSPPHPSI+S MD  SSKQ+K+Q+     A INQTKHK
Sbjct: 61  SSSD----------DDDLQDTATSPPHPSIISDMDGLSSKQKKQQQQQQLSAMINQTKHK 120

Query: 121 GKGSEDYGEVEDRIIQVGVVGRDNNKNYCSTGLKNIGLCLVPVSMALNYF 165
           GK  E++GEVEDRI +VG VGRDNN   CSTGLKNIGLCLVPVSMA+NYF
Sbjct: 121 GKEIEEFGEVEDRI-EVGFVGRDNN---CSTGLKNIGLCLVPVSMAINYF 144

BLAST of IVF0000091 vs. NCBI nr
Match: KAG6600765.1 (hypothetical protein SDJN03_05998, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 143 bits (361), Expect = 1.98e-40
Identity = 96/172 (55.81%), Postives = 113/172 (65.70%), Query Frame = 0

Query: 1   MENSANSRICSHGEEDRCEATFHEDPSWSTSSSMDDLLMFDVLFSNRLCCSSAVDGGAQA 60
           MENSA SRIC+  + D       +  SW+  SSMDDLL+FD    +    S  +   A  
Sbjct: 1   MENSAISRICTQKQVDE------DHSSWT--SSMDDLLLFD----HSKTISYHIQNAAVF 60

Query: 61  SASSFRLKRRKMAADDDLEDTATSPPHPSIVSKMDEPSSKQQKKQR-------ATINQTK 120
           S+S           DDDL+DTATSPPHPSI+S MD  SSKQ+K+Q+       A INQTK
Sbjct: 61  SSSD----------DDDLQDTATSPPHPSIISDMDGLSSKQKKQQQQQQQQLSAMINQTK 120

Query: 121 HKGKGSEDYGEVEDRIIQVGVVGRDNNKNYCSTGLKNIGLCLVPVSMALNYF 165
           HKGK  E++GEVEDRI +VG VGRDNN   CSTGLKNIGLCLVPVSMA+NYF
Sbjct: 121 HKGKEIEEFGEVEDRI-EVGFVGRDNN---CSTGLKNIGLCLVPVSMAINYF 146

BLAST of IVF0000091 vs. NCBI nr
Match: XP_022989755.1 (uncharacterized protein LOC111486825 [Cucurbita maxima])

HSP 1 Score: 142 bits (357), Expect = 7.52e-40
Identity = 95/175 (54.29%), Postives = 113/175 (64.57%), Query Frame = 0

Query: 1   MENSANSRICSHGEEDRCEATFHEDPSWSTSSSMDDLLMFDVL------FSNRLCCSSAV 60
           MENSA S+IC+  + D+      +  SW+  SSMDDLL+FD        F N    SS+ 
Sbjct: 1   MENSAISKICTQKQVDQ------DHSSWT--SSMDDLLLFDYSKTTSYHFQNAAVFSSSD 60

Query: 61  DGGAQASASSFRLKRRKMAADDDLEDTATSPPHPSIVSKMDEPSSKQQKKQR----ATIN 120
           D                   DDDL+DTATSPPHPSI+S MD  SSKQ+K+Q+    A IN
Sbjct: 61  D-------------------DDDLQDTATSPPHPSIISDMDGLSSKQKKQQQQQHTAMIN 120

Query: 121 QTKHKGKGSEDYGEVEDRIIQVGVVGRDNNKNYCSTGLKNIGLCLVPVSMALNYF 165
           QTKH+GK  E++GEVEDRI +VG VGRDNN   CSTGLKNIGLCLVPVSMA+NYF
Sbjct: 121 QTKHRGKEIEEFGEVEDRI-EVGFVGRDNN---CSTGLKNIGLCLVPVSMAINYF 144

BLAST of IVF0000091 vs. TAIR 10
Match: AT3G21710.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 41.2 bits (95), Expect = 9.5e-04
Identity = 32/107 (29.91%), Postives = 55/107 (51.40%), Query Frame = 0

Query: 66  RLKRRKMAADDDLEDTATSP---PHPSIVSKMDEPSSKQQKKQRATINQTKHKGKGS--- 125
           R + +K+  DD LEDTA+SP   P  S    +  P  K +    ++      +G G    
Sbjct: 102 RGRTKKICEDDSLEDTASSPVNSPKVSHFEHIQTPPRKIEDYVSSSFVMGNIRGMGDHQI 161

Query: 126 --EDYGEVEDRIIQVGVVGRDNNKNYCSTGLKNIGLCLVPVSMALNY 165
             ++ GE +  +++  + G +NN N  +  L++ GLC+VP+SM  N+
Sbjct: 162 QIQEGGEQKVTLMRNLIDGNNNNNNN-NMDLRSRGLCVVPISMLANF 207

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BKS23.6e-8392.61Putative CTD small phosphatase-like protein 2 OS=Cucumis melo var. makuwa OX=119... [more]
A0A1S3CKU13.6e-8392.61uncharacterized protein LOC103501601 OS=Cucumis melo OX=3656 GN=LOC103501601 PE=... [more]
A0A0A0L2F72.8e-7283.52Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G078270 PE=4 SV=1[more]
A0A5A7V6T31.4e-3183.52Xan_ur_permease domain-containing protein OS=Cucumis melo var. makuwa OX=1194695... [more]
A0A5D3CUV31.4e-3183.52Putative nucleobase-ascorbate transporter 10 OS=Cucumis melo var. makuwa OX=1194... [more]
Match NameE-valueIdentityDescription
XP_008463437.13.42e-10892.61PREDICTED: uncharacterized protein LOC103501601 [Cucumis melo] >TYK00353.1 putat... [more]
XP_011652737.27.28e-9483.52uncharacterized protein LOC105435073 [Cucumis sativus] >KGN56145.1 hypothetical ... [more]
KAG7031402.19.26e-4156.47hypothetical protein SDJN02_05442, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6600765.11.98e-4055.81hypothetical protein SDJN03_05998, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022989755.17.52e-4054.29uncharacterized protein LOC111486825 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
AT3G21710.29.5e-0429.91unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..122
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..82
NoneNo IPR availablePANTHERPTHR33974:SF2VASCULAR-RELATED UNKNOWN PROTEIN 1-RELATEDcoord: 50..165
IPR039280VASCULAR-RELATED UNKNOWN PROTEINPANTHERPTHR33974VASCULAR-RELATED UNKNOWN PROTEIN 1-RELATEDcoord: 50..165

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0000091.1IVF0000091.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006865 amino acid transport
biological_process GO:0009734 auxin-activated signaling pathway
biological_process GO:0006269 DNA replication, synthesis of RNA primer
biological_process GO:0055085 transmembrane transport
biological_process GO:0010089 xylem development
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003896 DNA primase activity
molecular_function GO:0015293 symporter activity