HG10022223 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10022223
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	CASP-like protein
Location	Chr05: 22076077 .. 22079594 (-)
RNA-Seq Expression	HG10022223
Synteny	HG10022223

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGTCTCAAAGGGTTCAAGAATGGCTACTCTTATATTGAGAATTTTAACCTTTATTTTGATATTTATTTCTCTCTTAATCATCGCCACCAATTCCAAAACTCTTTTTAAAGGGACTTTAGGTGAAACAAAAGTTGAGTTCAAAGATGTTTATTCCTATCGGTAAGTCTATTTTTTTTTTTTTTTTTTTTTTGGGTTTAAATAATGTTTTGGTGATTTTTTAGATAATAATGTAAATATTTGTTTTTCTAATTTATTGACTTAAATGGTCAGTTATGTGGTAGCTGTGGCGGTTATAGGAGCTACTTTGAGTCTTCTTCAAATTGTTCTCGCCATTTACTCTCTCCTTACCAAAGGCGAGGGAACTCCACTTTTCAATTTGTTCAGCGATAAGGTCACACTCTTTTTATTCAAGTAGTTGGAAGACACGTGTAATGCATTTTAATTGTGATTCAATTGTGTTCTTTATCATAAAATTTTGATTCAATATTCATTGAATGTTATTAGTAAATATTTCACATGAAATGAAGTAATTTTAAAATAGTACTTTAAATCATAAGAATATGAGATATTTTGGAAGTTATTCGAAATTTTTGGGAAGTTTTTTAAAAGAAAAAAATTATTTTTAAATATGAACATAATTATATAATTGAATTTAAATTTTAAATAGTTCACATGAAATTTAAAAGTATAAAAAGAGAAAAAATATATAGAAATAGATGAATGAATAAAATTAAAATAATGTAATTGGAATAAAAATGAGAACTTAATTATTATTTCATAGGTTAATTCTTTGATACATCCATAGTATTAAATTTCCATCGATATGTCGAAATTTCCATCAATATTTCCATGTTTTCATGAGTTCGAAATCGATTTGAGGGGTGAATCGATATTTTCACTATATTGTAAAAAAATCTACGAAACACGAAAAATAAGTTTCAAAATGCTACTAATATAAATATAATATAAATAATAGACCTGTTTACTTATTTGAAAATAATAAAATGTTTATTTACTATTTTAAATTTTTTGTTTTAAATTTTTTTCAGAAATATTCATCGAAATCGATATTTTGTTGATATTTCTATCGAAATTTCGGTAAATTTAAGACCTCGATGTTTCCATCGATATGGATATTTTAAACTTTGGATACATCCTTCTTAGAAGATAATAATTTTTTTTTTGGAGGAAAAAAAAAGAATGAAAGGAAAATGTTTGGAAATAAAAGGAATTTTTTTCAAATGAATTTGGTAGTCTTCTGAAAAAATAAGATTGTTTGTTTTTTTAATAAAAACAAAAAAATAAAATCTCTCATCAAATTCTTTTTTTTTTCATGTATTTGATTTAAAAAGTCTATTATAATTATTTAATATATGTATCTAAAATCCCAAATAATAAAATATCTATAAAATTATAAGGGTATTTGATTTTATAATTAATTCAATAAAAGTTAAAAAGAACTTAATGTTTCTTGTGGAGAACAAATACATGAAAAAAGTAATGTGTTCTAACAACAAATACATGAAAGAAGTAATGTGATCTAAACAATAAATAATTAGATAATGGCTAGCTAGTAATTATTGATTTAAATTAGTTTTAAAAAAATATTTTTTCCCTAAATTAAACACTCCTTCCTTTTAGATTTTTTTTAATATATAAAGCAACAAATAAGTCATTCCAAAAAAAAAAAAAATTCAAAAACATAAAATATAAGTATTTTTAAATCCAATCCAATTGTTTCATTTACGTAACAAAATCAAACTTGAAGTTTGAGCATCCTTTTATATTTTCAGTTGATGCCACTATGTGTTGTATTCACAAGAGATTTAATTATTCTTTTTTTAAAAAAAATATTCGTTGAAGGAACAAAAAAAAAAAAAAAAAAAAAAAAATACAAACATTGACAGAAATATCTTAATTTCGGAGATCAAACTATATTATATTCAATTTTAATTTATATTTATTTTAGTTCTTAGTCTATTTTTTAAAGAAAAATATTGCTAATCAAATAAATCTCCGATCTAATTAAGGTTTAACAAACAACATCTCTCATTGATGTGTCTAATTTCAATGGTTAGCAAGATAAACATTTTAACTTAATTTTTTTTATTTAAAAAAAGATACAAATGAAATATTCAACAAAATAATCAATTTTCTTAACGATCAAGAAGTAACAGTGAGATGATTCCACAATGGATTTGTGTAAGTAAGGAAACTGCAATTATATTGTAAGGAAATCAATGAATCATAAAAAGAACAAATTCCAAAACCCTTAACTCAATTGATGTCAATTCAAAGTGAAGAATTAGAATTGAATTACCTTTTGATTGAAGACCAAGAGATAAAGGAGAACTAATTTATTAACTCCAAGTTTGAACACTTCACAAGCAAGGTGATCAGACTTATTTGAATGTTCTTGGTATGCAATCATGAATTCAAGAATTGTAAAAAATGATGATAAGACTTTGTTATCTACCAAAAAAATTTTATTCAATAAAATCCAAAAACTCAAGACATCAAAAACCAACGTATTGTGTTCGCTTTTCCCCTTTAAAACACATCCTACTTAATCAAAGAGACTTAAAAAGTCCATTCTATCCCTACTAAAAACTCAAATAAAACATATAGGGATACAATAATGAAAATACCAAAAAAAAAAAAAAATCTATTTGCAAATATTAAAAAATGCGAATTAAAAATTTAACAAAGTGCAATTGGTTTCATGTTGTAGCATTATTTGAAGCCAATTATAGAACTTGATTAGATGTTGCTGCTTGAATCTCCTAAATTGAGTTCATCTCCATTTGTATGTGAGAATTCATTGCTAACTGCAACTTCTTGGCATTTGAACATGTGATTAGTCGCAGAGGTAACACAAGGGCTTCCTAGTTCATATCAACTAATGTGAATATTATATAAAATAATAAGCTTTTTAACTTATTAACAAAATGTAAATTTTTATTAAATATTATTTATGTTTTTTTTTAATAATTTTTCAATGTAAAATTGAGACTATGGAGATTGCAAATTTGTAAAATTTGAGAAACTAATGAACAAATACTCTACTTGGTAATGTTTGATTTTTTACATTTTACAAAAGTATTACAAATTTACAAATGCTAATTAATGTATATCTTATAATTTATGGTCCATTTTACCTCCAATGCATTACAAATTTTCAACTAGTTCATATGGAAGATTCCACATTAAAAATATGAAGAAATCTCACAATTTCTATAAGATATATATATTACTTTTCTTATTATTGTCGATCGGTTTTGATGTTTTGTGTTTCTTTATGTGCAGTTCTTATCGTACCTACTATTATCGGGCGCCTCGGCGGGATTAGGCGCAGGGATCGATATGAGAGCGAATTTGAAAGTGCTGGCTGGCAATGTTTTGAACTCATTTTTCGACAAGGGAAGTGCTGCAGCTGCTATTCTTCTTGTTGCATTTGTTTGTGCTGCCATGGTTTCAATTCTCTCTTCCTTGGCTCTCATCAGAAAGCCTTAA

mRNA sequence

ATGGCAGTCTCAAAGGGTTCAAGAATGGCTACTCTTATATTGAGAATTTTAACCTTTATTTTGATATTTATTTCTCTCTTAATCATCGCCACCAATTCCAAAACTCTTTTTAAAGGGACTTTAGGTGAAACAAAAGTTGAGTTCAAAGATGTTTATTCCTATCGTTATGTGGTAGCTGTGGCGGTTATAGGAGCTACTTTGAGTCTTCTTCAAATTGTTCTCGCCATTTACTCTCTCCTTACCAAAGGCGAGGGAACTCCACTTTTCAATTTGTTCAGCGATAAGTTCTTATCGTACCTACTATTATCGGGCGCCTCGGCGGGATTAGGCGCAGGGATCGATATGAGAGCGAATTTGAAAGTGCTGGCTGGCAATGTTTTGAACTCATTTTTCGACAAGGGAAGTGCTGCAGCTGCTATTCTTCTTGTTGCATTTGTTTGTGCTGCCATGGTTTCAATTCTCTCTTCCTTGGCTCTCATCAGAAAGCCTTAA

Coding sequence (CDS)

ATGGCAGTCTCAAAGGGTTCAAGAATGGCTACTCTTATATTGAGAATTTTAACCTTTATTTTGATATTTATTTCTCTCTTAATCATCGCCACCAATTCCAAAACTCTTTTTAAAGGGACTTTAGGTGAAACAAAAGTTGAGTTCAAAGATGTTTATTCCTATCGTTATGTGGTAGCTGTGGCGGTTATAGGAGCTACTTTGAGTCTTCTTCAAATTGTTCTCGCCATTTACTCTCTCCTTACCAAAGGCGAGGGAACTCCACTTTTCAATTTGTTCAGCGATAAGTTCTTATCGTACCTACTATTATCGGGCGCCTCGGCGGGATTAGGCGCAGGGATCGATATGAGAGCGAATTTGAAAGTGCTGGCTGGCAATGTTTTGAACTCATTTTTCGACAAGGGAAGTGCTGCAGCTGCTATTCTTCTTGTTGCATTTGTTTGTGCTGCCATGGTTTCAATTCTCTCTTCCTTGGCTCTCATCAGAAAGCCTTAA

Protein sequence

MAVSKGSRMATLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAVAVIGATLSLLQIVLAIYSLLTKGEGTPLFNLFSDKFLSYLLLSGASAGLGAGIDMRANLKVLAGNVLNSFFDKGSAAAAILLVAFVCAAMVSILSSLALIRKP

Homology

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BLAST of HG10022223 vs. NCBI nr
Match: XP_038877614.1 (CASP-like protein 4D1 [Benincasa hispida])

HSP 1 Score: 233.4 bits (594), Expect = 1.4e-57
Identity = 129/160 (80.62%), Postives = 144/160 (90.00%), Query Frame = 0


Query: 4   SKGSRMATLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAVAVI 63
           SKGSR+A+LILRILTFILIF++LLIIATNSKT+ +GT+ ETK+EFKDV SYRY+VAVAVI
Sbjct: 3   SKGSRIASLILRILTFILIFVALLIIATNSKTVLEGTVNETKIEFKDVNSYRYLVAVAVI 62

Query: 64  GATLSLLQIVLAIYSLLTKGEGTPLFNLFSDKFLSYLLLSGASAGLGAGIDMRANLKVLA 123
           G  LSLLQI   IY L+TKG+GTPLF+LFSDK LSYLLLSGASAGLGAGIDMR N K L 
Sbjct: 63  GGALSLLQIAFTIYHLVTKGDGTPLFDLFSDKLLSYLLLSGASAGLGAGIDMRVNFKELV 122

Query: 124 GNVLNSFFDKGSAAAAILLVAFVCAAMVSILSSLALIRKP 164
           GN  NSFFDKGSAAAAILL+AF+CAA+VSILSSLALIRKP
Sbjct: 123 GNFFNSFFDKGSAAAAILLLAFICAAIVSILSSLALIRKP 162

[Close]

BLAST of HG10022223 vs. NCBI nr
Match: XP_022134193.1 (CASP-like protein 4D1 [Momordica charantia])

HSP 1 Score: 228.8 bits (582), Expect = 3.4e-56
Identity = 124/163 (76.07%), Postives = 145/163 (88.96%), Query Frame = 0


Query: 1   MAVSKGSRMATLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAV 60
           MA SKGSR+A+LILRILTF+LIFISLLIIATNSKT+ KGT  E KVEFKDVYSYRY+ A 
Sbjct: 1   MAASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAA 60

Query: 61  AVIGATLSLLQIVLAIYSLLTKGEGTPLFNLFSDKFLSYLLLSGASAGLGAGIDMRANLK 120
           AVIGA LSLLQI L +Y ++TK +GTP F++FSDK L+YLLLSGASAGLGAGID+R+N K
Sbjct: 61  AVIGAALSLLQIALTLYHVVTKSDGTPFFDMFSDKLLTYLLLSGASAGLGAGIDLRSNYK 120

Query: 121 VLAGNVLNSFFDKGSAAAAILLVAFVCAAMVSILSSLALIRKP 164
            L GN+ NSFFDKGSA+AAILL+AF+C+A+VSILSSLAL+RKP
Sbjct: 121 DLVGNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRKP 163

[Close]

BLAST of HG10022223 vs. NCBI nr
Match: XP_022963262.1 (CASP-like protein 4D1 [Cucurbita moschata] >KAG6602371.1 CASP-like protein 4D1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 215.7 bits (548), Expect = 3.0e-52
Identity = 121/163 (74.23%), Postives = 141/163 (86.50%), Query Frame = 0


Query: 1   MAVSKGSRMATLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAV 60
           MA SKGSR+A+LILRILTFILIFISL+I ATNSKTL KGT  E K+EFK+VYSYRY++A 
Sbjct: 1   MAASKGSRIASLILRILTFILIFISLIINATNSKTLNKGTENEAKLEFKNVYSYRYLIAA 60

Query: 61  AVIGATLSLLQIVLAIYSLLTKGEGTPLFNLFSDKFLSYLLLSGASAGLGAGIDMRANLK 120
           AVIG  LSL+QI+L+IY ++TK EGTPLF LFSD  LSYLLLS +SA LGAGIDMRANLK
Sbjct: 61  AVIGGVLSLIQIILSIYHMVTKSEGTPLFYLFSDYLLSYLLLSSSSAALGAGIDMRANLK 120

Query: 121 VLAGNVLNSFFDKGSAAAAILLVAFVCAAMVSILSSLALIRKP 164
            L G + +SFFD+GS AAA+L +AFVCAA+VSILS+LALIRKP
Sbjct: 121 ELFGTLFDSFFDQGSGAAAVLFIAFVCAAVVSILSALALIRKP 163

[Close]

BLAST of HG10022223 vs. NCBI nr
Match: XP_022990589.1 (CASP-like protein 4D1 [Cucurbita maxima])

HSP 1 Score: 212.2 bits (539), Expect = 3.3e-51
Identity = 119/163 (73.01%), Postives = 140/163 (85.89%), Query Frame = 0


Query: 1   MAVSKGSRMATLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAV 60
           MA SKGSR+ATLILRILT ILIFISL+I A+NSKTL KGT  E K+EFK+VYSYRY++A 
Sbjct: 1   MAASKGSRIATLILRILTLILIFISLIINASNSKTLNKGTENEAKLEFKNVYSYRYLIAA 60

Query: 61  AVIGATLSLLQIVLAIYSLLTKGEGTPLFNLFSDKFLSYLLLSGASAGLGAGIDMRANLK 120
           AVIG  LSL+QI+L+IY ++TK EGTPLF LFSD  LSYLLLS +SA LGAGID RANLK
Sbjct: 61  AVIGGVLSLIQIILSIYHMVTKSEGTPLFYLFSDYLLSYLLLSSSSAALGAGIDTRANLK 120

Query: 121 VLAGNVLNSFFDKGSAAAAILLVAFVCAAMVSILSSLALIRKP 164
            L G + +SFFD+GS AAA+LL+AF+CAA+VSILS+LALIRKP
Sbjct: 121 ELFGTLFDSFFDQGSGAAAVLLIAFICAAVVSILSALALIRKP 163

[Close]

BLAST of HG10022223 vs. NCBI nr
Match: XP_022990642.1 (CASP-like protein 4D1 [Cucurbita maxima])

HSP 1 Score: 211.8 bits (538), Expect = 4.3e-51
Identity = 120/163 (73.62%), Postives = 140/163 (85.89%), Query Frame = 0


Query: 1   MAVSKGSRMATLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAV 60
           M  SKGSR+A+LILRILTFILIFISLLI ATNSKTL KG   ETK +FKDVYSYRY+++ 
Sbjct: 1   MEGSKGSRIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLIST 60

Query: 61  AVIGATLSLLQIVLAIYSLLTKGEGTPLFNLFSDKFLSYLLLSGASAGLGAGIDMRANLK 120
            +IGA LSLLQI L IY+++TK   T LF++FSDK LSYLLLSGASAGLGAGID+R  LK
Sbjct: 61  TIIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK 120

Query: 121 VLAGNVLNSFFDKGSAAAAILLVAFVCAAMVSILSSLALIRKP 164
            L GN+LNSF DKG+A+AA+LL+AF+CAA+VSILSSLALIRKP
Sbjct: 121 ELVGNLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIRKP 163

[Close]

BLAST of HG10022223 vs. ExPASy Swiss-Prot
Match: B9SXY8 (CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 3.6e-24
Identity = 74/162 (45.68%), Postives = 108/162 (66.67%), Query Frame = 0


Query: 4   SKGSRMATLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAVAVI 63
           S  SRMA LILRILTFI +  SL+I+ TN+ TL +  L E KV FKDVY+YRY++A  VI
Sbjct: 7   SLASRMAALILRILTFIFLIASLVILTTNTATL-ELDLVEVKVHFKDVYAYRYMLATIVI 66

Query: 64  GATLSLLQIVLAIYSLLT-----KGEGTPLFNLFSDKFLSYLLLSGASAGLGAGIDMRAN 123
           G   ++LQI   +Y + T      G+G   F+ F DK +SY+L++GA+AG  +  D++  
Sbjct: 67  GLAYTVLQIAFTLYYVATGNRMMSGDGNLAFDFFGDKVISYILVTGAAAGFASTKDIK-- 126

Query: 124 LKVLAGN-VLNSFFDKGSAAAAILLVAFVCAAMVSILSSLAL 160
             V +G+   ++F +KG A+A++LL+ FVC A++S+ SS AL
Sbjct: 127 -PVFSGSGDFDAFINKGYASASLLLIGFVCTAVLSVFSSYAL 164

[Close]

BLAST of HG10022223 vs. ExPASy Swiss-Prot
Match: B9NBE5 (CASP-like protein 4D1 OS=Populus trichocarpa OX=3694 GN=POPTR_0010s21230g PE=2 SV=2)

HSP 1 Score: 107.8 bits (268), Expect = 1.1e-22
Identity = 70/167 (41.92%), Postives = 105/167 (62.87%), Query Frame = 0


Query: 2   AVSKGSRMATLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAVA 61
           A S  SRM  L LR+LTF  + +SL+I+ TN+ T+  G + E KV  KD YSYRY++A  
Sbjct: 14  APSMVSRMTALFLRVLTFAFLMVSLVIMTTNTGTIEIG-IDEFKVRSKDFYSYRYMLAAI 73

Query: 62  VIGATLSLLQIVLAIYSL------LTKGEGTPLFNLFSDKFLSYLLLSGASAGLGAGIDM 121
             G T ++LQI L +  +       T G+G  +F+ + DK +SY+L +GA+A  GA  ++
Sbjct: 74  AFGLTYTILQIALTLNHISKRNGAQTSGDGNLVFDFYGDKVVSYILATGAAAAFGATKEL 133

Query: 122 RANLKVLAGNVLNSFFDKGSAAAAILLVAFVCAAMVSILSSLALIRK 163
           +  L  L G   + FF+KG A+A++LL+ FVC A++S+ SS AL +K
Sbjct: 134 KTQLAGLGG---DKFFNKGYASASLLLLGFVCTAILSVFSSYALPKK 176

[Close]

BLAST of HG10022223 vs. ExPASy Swiss-Prot
Match: D7LD60 (CASP-like protein 4D1 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_903205 PE=3 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 2.9e-18
Identity = 64/163 (39.26%), Postives = 103/163 (63.19%), Query Frame = 0


Query: 8   RMATLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAVAVIGATL 67
           R   L+LR+LT   + I++++I+TN+ TL + +    K+ F DVY+YRY+++ AVIG   
Sbjct: 14  RTVLLLLRVLTAAFLVITVVLISTNTVTL-EVSSTSIKMRFNDVYAYRYMLSAAVIGLLY 73

Query: 68  SLLQIVLAIYSLLTKGEGTPL---FNLFSDKFLSYLLLSGASAGLGAGIDMRANLKVL-- 127
           +++Q+ L I    T G   PL   FN + DK +SYLL +G++AG G   D++     L  
Sbjct: 74  AVVQLFLTISQFAT-GTTHPLNYQFNFYGDKIISYLLATGSAAGFGVSKDLKETFLALIE 133

Query: 128 --AGNVLNSFFDKGSAAAAILLVAFVCAAMVSILSSLALIRKP 164
             + + ++ FF KG A+A++LL AFV  A++S+ SSLAL ++P
Sbjct: 134 FDSTDPVDKFFSKGYASASLLLFAFVSLAVLSVFSSLALSKRP 174

[Close]

BLAST of HG10022223 vs. ExPASy Swiss-Prot
Match: A1XGB4 (CASP-like protein PIMP1 OS=Capsicum annuum OX=4072 GN=PIMP1 PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 2.9e-18
Identity = 67/158 (42.41%), Postives = 100/158 (63.29%), Query Frame = 0


Query: 11  TLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAVAVIGATLSLL 70
           +LI+RILT I + IS ++IATN++T+     G+ K++FKD Y+YRY++A  +IG   +LL
Sbjct: 14  SLIVRILTLICLLISFIVIATNNQTV-STVAGDVKIKFKDFYAYRYLIATVIIGMAYTLL 73

Query: 71  QIVLAIYSLLTK-----GEGTPLFNLFSDKFLSYLLLSGASAGLGAGIDMRANLKVLAG- 130
           QI  +I SLLT      GEG  LF+ + DKF+SY L++GA+A  G    M  +LK L G 
Sbjct: 74  QIAFSI-SLLTTGNRIGGEGFLLFDFYGDKFISYFLVTGAAASFG----MTQDLKQLEGS 133

Query: 131 NVLNSFFDKGSAAAAILLVAFVCAAMVSILSSLALIRK 163
           +  + F +  +AAA++ L+ F  A   SI SS  L ++
Sbjct: 134 DNYSKFLNTSNAAASLCLIGFFFAVASSIFSSYNLPKR 165

[Close]

BLAST of HG10022223 vs. ExPASy Swiss-Prot
Match: Q8GWD5 (CASP-like protein 4D1 OS=Arabidopsis thaliana OX=3702 GN=At2g39530 PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.4e-17
Identity = 63/163 (38.65%), Postives = 106/163 (65.03%), Query Frame = 0


Query: 8   RMATLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAVAVIGATL 67
           R   L+LR+LT   + I++++I+TN+ TL + +    K+ F DVY+YRY+++ AVIG   
Sbjct: 14  RTVLLLLRVLTAAFLLITVVLISTNTVTL-EISSTSIKLPFNDVYAYRYMLSAAVIGLVY 73

Query: 68  SLLQIVLAIYSLLTKGEGTPL---FNLFSDKFLSYLLLSGASAGLGAGIDMR----ANLK 127
           +++Q+ L I    T G+  PL   F+ + DK +SYLL +G++AG G   D++    A ++
Sbjct: 74  AVVQLFLTISQFAT-GKTHPLTYQFDFYGDKVISYLLATGSAAGFGVSKDLKDTYIALIE 133

Query: 128 VLAGNVLNSFFDKGSAAAAILLVAFVCAAMVSILSSLALIRKP 164
             + + ++ FF KG A+A++LL AFV  A++S+ SSLAL ++P
Sbjct: 134 FDSTDPVDKFFSKGYASASLLLFAFVSLAVLSVFSSLALSKRP 174

[Close]

BLAST of HG10022223 vs. ExPASy TrEMBL
Match: A0A6J1C1A4 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006513 PE=3 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.6e-56
Identity = 124/163 (76.07%), Postives = 145/163 (88.96%), Query Frame = 0


Query: 1   MAVSKGSRMATLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAV 60
           MA SKGSR+A+LILRILTF+LIFISLLIIATNSKT+ KGT  E KVEFKDVYSYRY+ A 
Sbjct: 1   MAASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAA 60

Query: 61  AVIGATLSLLQIVLAIYSLLTKGEGTPLFNLFSDKFLSYLLLSGASAGLGAGIDMRANLK 120
           AVIGA LSLLQI L +Y ++TK +GTP F++FSDK L+YLLLSGASAGLGAGID+R+N K
Sbjct: 61  AVIGAALSLLQIALTLYHVVTKSDGTPFFDMFSDKLLTYLLLSGASAGLGAGIDLRSNYK 120

Query: 121 VLAGNVLNSFFDKGSAAAAILLVAFVCAAMVSILSSLALIRKP 164
            L GN+ NSFFDKGSA+AAILL+AF+C+A+VSILSSLAL+RKP
Sbjct: 121 DLVGNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRKP 163

[Close]

BLAST of HG10022223 vs. ExPASy TrEMBL
Match: A0A6J1HET3 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111463525 PE=3 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 1.4e-52
Identity = 121/163 (74.23%), Postives = 141/163 (86.50%), Query Frame = 0


Query: 1   MAVSKGSRMATLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAV 60
           MA SKGSR+A+LILRILTFILIFISL+I ATNSKTL KGT  E K+EFK+VYSYRY++A 
Sbjct: 1   MAASKGSRIASLILRILTFILIFISLIINATNSKTLNKGTENEAKLEFKNVYSYRYLIAA 60

Query: 61  AVIGATLSLLQIVLAIYSLLTKGEGTPLFNLFSDKFLSYLLLSGASAGLGAGIDMRANLK 120
           AVIG  LSL+QI+L+IY ++TK EGTPLF LFSD  LSYLLLS +SA LGAGIDMRANLK
Sbjct: 61  AVIGGVLSLIQIILSIYHMVTKSEGTPLFYLFSDYLLSYLLLSSSSAALGAGIDMRANLK 120

Query: 121 VLAGNVLNSFFDKGSAAAAILLVAFVCAAMVSILSSLALIRKP 164
            L G + +SFFD+GS AAA+L +AFVCAA+VSILS+LALIRKP
Sbjct: 121 ELFGTLFDSFFDQGSGAAAVLFIAFVCAAVVSILSALALIRKP 163

[Close]

BLAST of HG10022223 vs. ExPASy TrEMBL
Match: A0A6J1JSF8 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111487423 PE=3 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.6e-51
Identity = 119/163 (73.01%), Postives = 140/163 (85.89%), Query Frame = 0


Query: 1   MAVSKGSRMATLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAV 60
           MA SKGSR+ATLILRILT ILIFISL+I A+NSKTL KGT  E K+EFK+VYSYRY++A 
Sbjct: 1   MAASKGSRIATLILRILTLILIFISLIINASNSKTLNKGTENEAKLEFKNVYSYRYLIAA 60

Query: 61  AVIGATLSLLQIVLAIYSLLTKGEGTPLFNLFSDKFLSYLLLSGASAGLGAGIDMRANLK 120
           AVIG  LSL+QI+L+IY ++TK EGTPLF LFSD  LSYLLLS +SA LGAGID RANLK
Sbjct: 61  AVIGGVLSLIQIILSIYHMVTKSEGTPLFYLFSDYLLSYLLLSSSSAALGAGIDTRANLK 120

Query: 121 VLAGNVLNSFFDKGSAAAAILLVAFVCAAMVSILSSLALIRKP 164
            L G + +SFFD+GS AAA+LL+AF+CAA+VSILS+LALIRKP
Sbjct: 121 ELFGTLFDSFFDQGSGAAAVLLIAFICAAVVSILSALALIRKP 163

[Close]

BLAST of HG10022223 vs. ExPASy TrEMBL
Match: A0A6J1JJD2 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111487466 PE=3 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 2.1e-51
Identity = 120/163 (73.62%), Postives = 140/163 (85.89%), Query Frame = 0


Query: 1   MAVSKGSRMATLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAV 60
           M  SKGSR+A+LILRILTFILIFISLLI ATNSKTL KG   ETK +FKDVYSYRY+++ 
Sbjct: 1   MEGSKGSRIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLIST 60

Query: 61  AVIGATLSLLQIVLAIYSLLTKGEGTPLFNLFSDKFLSYLLLSGASAGLGAGIDMRANLK 120
            +IGA LSLLQI L IY+++TK   T LF++FSDK LSYLLLSGASAGLGAGID+R  LK
Sbjct: 61  TIIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK 120

Query: 121 VLAGNVLNSFFDKGSAAAAILLVAFVCAAMVSILSSLALIRKP 164
            L GN+LNSF DKG+A+AA+LL+AF+CAA+VSILSSLALIRKP
Sbjct: 121 ELVGNLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIRKP 163

[Close]

BLAST of HG10022223 vs. ExPASy TrEMBL
Match: A0A6J1GRM4 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111456492 PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 7.9e-51
Identity = 119/163 (73.01%), Postives = 139/163 (85.28%), Query Frame = 0


Query: 1   MAVSKGSRMATLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAV 60
           M  SKGSR+A+LILRILTFILIFISL+I ATNSKT  KG   ET  +FKDVYSYRY+++ 
Sbjct: 1   MEGSKGSRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLIST 60

Query: 61  AVIGATLSLLQIVLAIYSLLTKGEGTPLFNLFSDKFLSYLLLSGASAGLGAGIDMRANLK 120
            VIGA LSLLQI L IY+++TK   T LF++FSDK LSYLLLSGASAGLGAGID+R  LK
Sbjct: 61  TVIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK 120

Query: 121 VLAGNVLNSFFDKGSAAAAILLVAFVCAAMVSILSSLALIRKP 164
            L GN+LNSFFDKG+A+AA+LL+AF+CAA+VSILSSLALIRKP
Sbjct: 121 ELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP 163

[Close]

BLAST of HG10022223 vs. TAIR 10
Match: AT2G39530.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 90.9 bits (224), Expect = 1.0e-18
Identity = 63/163 (38.65%), Postives = 106/163 (65.03%), Query Frame = 0


Query: 8   RMATLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAVAVIGATL 67
           R   L+LR+LT   + I++++I+TN+ TL + +    K+ F DVY+YRY+++ AVIG   
Sbjct: 14  RTVLLLLRVLTAAFLLITVVLISTNTVTL-EISSTSIKLPFNDVYAYRYMLSAAVIGLVY 73

Query: 68  SLLQIVLAIYSLLTKGEGTPL---FNLFSDKFLSYLLLSGASAGLGAGIDMR----ANLK 127
           +++Q+ L I    T G+  PL   F+ + DK +SYLL +G++AG G   D++    A ++
Sbjct: 74  AVVQLFLTISQFAT-GKTHPLTYQFDFYGDKVISYLLATGSAAGFGVSKDLKDTYIALIE 133

Query: 128 VLAGNVLNSFFDKGSAAAAILLVAFVCAAMVSILSSLALIRKP 164
             + + ++ FF KG A+A++LL AFV  A++S+ SSLAL ++P
Sbjct: 134 FDSTDPVDKFFSKGYASASLLLFAFVSLAVLSVFSSLALSKRP 174

[Close]

BLAST of HG10022223 vs. TAIR 10
Match: AT2G39518.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 87.0 bits (214), Expect = 1.5e-17
Identity = 56/161 (34.78%), Postives = 97/161 (60.25%), Query Frame = 0


Query: 8   RMATLILRILTFILIFISLLIIATNSKTLFKGTLGETKVEFKDVYSYRYVVAVAVIGATL 67
           ++  L+LR+LT + + I+L+I++TNS T+        K  FKDVY+YRY+++ AVIG   
Sbjct: 14  KVLLLLLRVLTGVFLVIALIILSTNSVTIVSQG-SALKFHFKDVYAYRYMLSAAVIGLVY 73

Query: 68  SLLQIVLAIYSLLT--KGEGTPLFNLFSDKFLSYLLLSGASAGLGAGIDMRANLKVLAG- 127
           +++Q+   I    T  K       + + DK +SYL+ +G++AG G   D++     L   
Sbjct: 74  AVIQLFFTISEFATGVKNPFNYQLDFYGDKLISYLVATGSAAGFGVTKDLKDTFLALVAL 133

Query: 128 ---NVLNSFFDKGSAAAAILLVAFVCAAMVSILSSLALIRK 163
              + ++ FF KG A+A++LL AF+C A++S+ SS A+ ++
Sbjct: 134 DSTDPVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAKR 173

The following BLAST results are available for this feature:

BLAST of HG10022223 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877614.1	1.4e-57	80.63	CASP-like protein 4D1 [Benincasa hispida]	[more]
XP_022134193.1	3.4e-56	76.07	CASP-like protein 4D1 [Momordica charantia]	[more]
XP_022963262.1	3.0e-52	74.23	CASP-like protein 4D1 [Cucurbita moschata] >KAG6602371.1 CASP-like protein 4D1, ...	[more]
XP_022990589.1	3.3e-51	73.01	CASP-like protein 4D1 [Cucurbita maxima]	[more]
XP_022990642.1	4.3e-51	73.62	CASP-like protein 4D1 [Cucurbita maxima]	[more]

BLAST of HG10022223 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9SXY8	3.6e-24	45.68	CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1	[more]
B9NBE5	1.1e-22	41.92	CASP-like protein 4D1 OS=Populus trichocarpa OX=3694 GN=POPTR_0010s21230g PE=2 S...	[more]
D7LD60	2.9e-18	39.26	CASP-like protein 4D1 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT...	[more]
A1XGB4	2.9e-18	42.41	CASP-like protein PIMP1 OS=Capsicum annuum OX=4072 GN=PIMP1 PE=2 SV=1	[more]
Q8GWD5	1.4e-17	38.65	CASP-like protein 4D1 OS=Arabidopsis thaliana OX=3702 GN=At2g39530 PE=2 SV=1	[more]

BLAST of HG10022223 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C1A4	1.6e-56	76.07	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006513 PE=3 SV=1	[more]
A0A6J1HET3	1.4e-52	74.23	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111463525 PE=3 SV=1	[more]
A0A6J1JSF8	1.6e-51	73.01	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111487423 PE=3 SV=1	[more]
A0A6J1JJD2	2.1e-51	73.62	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111487466 PE=3 SV=1	[more]
A0A6J1GRM4	7.9e-51	73.01	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111456492 PE=3 SV=1	[more]

BLAST of HG10022223 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39530.1	1.0e-18	38.65	Uncharacterised protein family (UPF0497)	[more]
AT2G39518.1	1.5e-17	34.78	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 6..147 e-value: 2.0E-23 score: 82.8
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 6..162
None	No IPR available	PANTHER	PTHR11615:SF148	CASP-LIKE PROTEIN 4D2	coord: 6..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10022223.1	HG10022223.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding