HG10021842 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10021842
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionWD repeat-containing protein 91-like protein
LocationChr05: 17475145 .. 17475555 (+)
RNA-Seq ExpressionHG10021842
SyntenyHG10021842
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGGAGGAGTTGAATGGGTTAGCCGAGAAGGAAAAAGGTAGAGTTGAGTATTACGAAACCAAAGTTCAAAACATAGCTATTGGGAGAATTGTGTTGGCTCGTTTACTCTTTTTTTCCATCTCTCAAACTTCTCCTAATTCCTCTCTTCTTCATTGCAATGATTGGTGGTTGGTTTTTACTTTAACTTGCTTCTGCACCTTCCTTTACATGCTTCTTTTTGTCCATAACTCTATTATACTCTATCGAGTCGAACGCCGACTCCATGCTATTGATCACCAACAAATAGAGATTCATCGACAAATTTCGATTCTCATATCAGAAGAAGCTCAACTCAACTCGATGATTGTACCCATCATCGTGGATGTTGGGCATACCACGAGTACTTTTGAGAGGAAAGTTTATATTTAG

mRNA sequence

ATGTTGGAGGAGTTGAATGGGTTAGCCGAGAAGGAAAAAGGTAGAGTTGAGTATTACGAAACCAAAGTTCAAAACATAGCTATTGGGAGAATTGTGTTGGCTCGTTTACTCTTTTTTTCCATCTCTCAAACTTCTCCTAATTCCTCTCTTCTTCATTGCAATGATTGGTGGTTGGTTTTTACTTTAACTTGCTTCTGCACCTTCCTTTACATGCTTCTTTTTGTCCATAACTCTATTATACTCTATCGAGTCGAACGCCGACTCCATGCTATTGATCACCAACAAATAGAGATTCATCGACAAATTTCGATTCTCATATCAGAAGAAGCTCAACTCAACTCGATGATTGTACCCATCATCGTGGATGTTGGGCATACCACGAGTACTTTTGAGAGGAAAGTTTATATTTAG

Coding sequence (CDS)

ATGTTGGAGGAGTTGAATGGGTTAGCCGAGAAGGAAAAAGGTAGAGTTGAGTATTACGAAACCAAAGTTCAAAACATAGCTATTGGGAGAATTGTGTTGGCTCGTTTACTCTTTTTTTCCATCTCTCAAACTTCTCCTAATTCCTCTCTTCTTCATTGCAATGATTGGTGGTTGGTTTTTACTTTAACTTGCTTCTGCACCTTCCTTTACATGCTTCTTTTTGTCCATAACTCTATTATACTCTATCGAGTCGAACGCCGACTCCATGCTATTGATCACCAACAAATAGAGATTCATCGACAAATTTCGATTCTCATATCAGAAGAAGCTCAACTCAACTCGATGATTGTACCCATCATCGTGGATGTTGGGCATACCACGAGTACTTTTGAGAGGAAAGTTTATATTTAG

Protein sequence

MLEELNGLAEKEKGRVEYYETKVQNIAIGRIVLARLLFFSISQTSPNSSLLHCNDWWLVFTLTCFCTFLYMLLFVHNSIILYRVERRLHAIDHQQIEIHRQISILISEEAQLNSMIVPIIVDVGHTTSTFERKVYI
Homology
BLAST of HG10021842 vs. NCBI nr
Match: KGN51471.1 (hypothetical protein Csa_009166 [Cucumis sativus])

HSP 1 Score: 157.5 bits (397), Expect = 8.0e-35
Identity = 86/142 (60.56%), Postives = 107/142 (75.35%), Query Frame = 0

Query: 1   MLEELNGLAEKEKGRVEYYETKVQNIAIGRIVLARLLFFSISQTSPNSSLLHCNDWWLVF 60
           +LEELN +A+ +KGRVE YET +QNIAI  +V  RL FFS+SQTSPNSSLLHC  WWL+F
Sbjct: 12  VLEELNAMADTQKGRVENYETSLQNIAIAFLVWLRLFFFSLSQTSPNSSLLHCKHWWLLF 71

Query: 61  TLTCFCTFLYMLLFVHNSIILYRVERRLHAIDHQQIEIHRQISILISEEAQLNSMIVPII 120
            LTCF  FLY+LLF+HNS++L R ER+LH I  QQI++H+QI +L  +E  L  MI PII
Sbjct: 72  ALTCFSAFLYILLFIHNSLMLSRTERQLHVISRQQIQLHQQIWMLRLQE--LPQMIEPII 131

Query: 121 VD------VGHTTSTFERKVYI 137
           +D      +G  TSTFERK+YI
Sbjct: 132 MDHIINGEMGR-TSTFERKLYI 150

BLAST of HG10021842 vs. NCBI nr
Match: XP_022157182.1 (uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncharacterized protein LOC111023958 [Momordica charantia])

HSP 1 Score: 87.8 bits (216), Expect = 7.8e-14
Identity = 52/129 (40.31%), Postives = 78/129 (60.47%), Query Frame = 0

Query: 3   EELNGLAEKEKGRVEYYETKVQNIAIGRIVLARLLFFSISQTSPNSSLLHCNDWWLVFTL 62
           EEL  + EK++ RV YYETKVQNI  G ++  RL FF ISQT   SS  +C DWW++  L
Sbjct: 11  EELKDINEKQESRVRYYETKVQNIVFGYLIFTRLFFFGISQT---SSSFNCKDWWVILAL 70

Query: 63  TCFCTFLYMLLFVHNSIILYRVERRLHAIDHQQIEIHRQISILISEEAQLNSMIVPIIVD 122
           +  C+F+Y LLF+    +L+R + +L  I  +  E+ +Q  IL+S+    N   V + ++
Sbjct: 71  SLLCSFIYFLLFLDAVAMLFRTQYQLDIICKELKELFQQ--ILVSK----NQDDVGLSME 130

Query: 123 VGHTTSTFE 132
            G ++  FE
Sbjct: 131 TGESSGGFE 130

BLAST of HG10021842 vs. NCBI nr
Match: XP_022157130.1 (uncharacterized protein LOC111023927 [Momordica charantia])

HSP 1 Score: 87.0 bits (214), Expect = 1.3e-13
Identity = 51/134 (38.06%), Postives = 82/134 (61.19%), Query Frame = 0

Query: 3   EELNGLAEKEKGRVEYYETKVQNIAIGRIVLARLLFFSISQTSPNSSLLHCNDWWLVFTL 62
           E L  L EK++ RV+Y+E++ QNI +  ++  RL FF+ISQTS  SSLL C DWW+V  L
Sbjct: 11  EALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQTS--SSLLKCIDWWMVLGL 70

Query: 63  TCFCTFLYMLLFVHNSIILYRVERRLHAIDHQQIEIHRQISILISEEAQLNSMIVPIIVD 122
           +  C F+Y L F+    +LYRV+ ++  I  +Q EI +QI +     +QL+   V + ++
Sbjct: 71  SVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILV---ARSQLDD--VDLAME 130

Query: 123 VGHTTSTFERKVYI 137
            G ++  F+   ++
Sbjct: 131 AGDSSDGFQFSFHV 137

BLAST of HG10021842 vs. NCBI nr
Match: KAG6579345.1 (hypothetical protein SDJN03_23793, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 84.3 bits (207), Expect = 8.6e-13
Identity = 46/139 (33.09%), Postives = 80/139 (57.55%), Query Frame = 0

Query: 1   MLEELNGLAEKEKGRVEYYETKVQNIAIGRIVLARLLFFSISQTS--PNSSLLHCN-DWW 60
           M+EE+ G+ E  + +V YY+TK+ NI +   V  R+ FF IS+ +  P  S L CN +WW
Sbjct: 13  MMEEVQGMGENVEAKVNYYDTKLHNIIVAYFVWERVFFFGISKKTFPPTISTLSCNGNWW 72

Query: 61  LVFTLTCFCTFLYMLLFVHNSIILYRVERRLHAIDHQQIEIHRQISILISEEAQLNSMIV 120
           ++  L+  C+F+Y+LLF   +++LYR E +LH I  +  ++ R +  +  E+A + + ++
Sbjct: 73  VILALSSSCSFVYVLLFFDTALMLYRHENQLHLILQKHAQLCRHLLAIKEEQADIKASLM 132

Query: 121 PIIVDVGHTTSTFERKVYI 137
               +  H  S  E  + I
Sbjct: 133 EAGDEASHGLSLEEELMLI 151

BLAST of HG10021842 vs. NCBI nr
Match: KAG6579352.1 (hypothetical protein SDJN03_23800, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 83.6 bits (205), Expect = 1.5e-12
Identity = 48/139 (34.53%), Postives = 81/139 (58.27%), Query Frame = 0

Query: 1   MLEELNGLAEKEKGRVEYYETKVQNIAIGRIVLARLLFFSIS-QTSPNS-SLLHCN-DWW 60
           M+EE+ G+ EK + +V YY+TK+  I +   V  R+ FF IS +T P++ S L CN +WW
Sbjct: 9   MMEEVQGMGEKVEAKVNYYDTKLHTIIVAYFVWERVFFFGISKKTFPSTISTLSCNGNWW 68

Query: 61  LVFTLTCFCTFLYMLLFVHNSIILYRVERRLHAIDHQQIEIHRQISILISEEAQLNSMIV 120
           ++  L+C C+F+Y+LLF   +++LYR E +LH I  +  ++ R +  +  E+A   + ++
Sbjct: 69  VILALSCSCSFVYVLLFFDAALMLYRHENQLHLILQKHAQLCRHLLAIKEEQADTKASLM 128

Query: 121 PIIVDVGHTTSTFERKVYI 137
                  H  S  E  + I
Sbjct: 129 EAGDQASHGLSLEEELMLI 147

BLAST of HG10021842 vs. ExPASy TrEMBL
Match: A0A0A0KUT0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G562290 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 3.9e-35
Identity = 86/142 (60.56%), Postives = 107/142 (75.35%), Query Frame = 0

Query: 1   MLEELNGLAEKEKGRVEYYETKVQNIAIGRIVLARLLFFSISQTSPNSSLLHCNDWWLVF 60
           +LEELN +A+ +KGRVE YET +QNIAI  +V  RL FFS+SQTSPNSSLLHC  WWL+F
Sbjct: 12  VLEELNAMADTQKGRVENYETSLQNIAIAFLVWLRLFFFSLSQTSPNSSLLHCKHWWLLF 71

Query: 61  TLTCFCTFLYMLLFVHNSIILYRVERRLHAIDHQQIEIHRQISILISEEAQLNSMIVPII 120
            LTCF  FLY+LLF+HNS++L R ER+LH I  QQI++H+QI +L  +E  L  MI PII
Sbjct: 72  ALTCFSAFLYILLFIHNSLMLSRTERQLHVISRQQIQLHQQIWMLRLQE--LPQMIEPII 131

Query: 121 VD------VGHTTSTFERKVYI 137
           +D      +G  TSTFERK+YI
Sbjct: 132 MDHIINGEMGR-TSTFERKLYI 150

BLAST of HG10021842 vs. ExPASy TrEMBL
Match: A0A6J1DSQ0 (uncharacterized protein LOC111023958 OS=Momordica charantia OX=3673 GN=LOC111023958 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 3.8e-14
Identity = 52/129 (40.31%), Postives = 78/129 (60.47%), Query Frame = 0

Query: 3   EELNGLAEKEKGRVEYYETKVQNIAIGRIVLARLLFFSISQTSPNSSLLHCNDWWLVFTL 62
           EEL  + EK++ RV YYETKVQNI  G ++  RL FF ISQT   SS  +C DWW++  L
Sbjct: 11  EELKDINEKQESRVRYYETKVQNIVFGYLIFTRLFFFGISQT---SSSFNCKDWWVILAL 70

Query: 63  TCFCTFLYMLLFVHNSIILYRVERRLHAIDHQQIEIHRQISILISEEAQLNSMIVPIIVD 122
           +  C+F+Y LLF+    +L+R + +L  I  +  E+ +Q  IL+S+    N   V + ++
Sbjct: 71  SLLCSFIYFLLFLDAVAMLFRTQYQLDIICKELKELFQQ--ILVSK----NQDDVGLSME 130

Query: 123 VGHTTSTFE 132
            G ++  FE
Sbjct: 131 TGESSGGFE 130

BLAST of HG10021842 vs. ExPASy TrEMBL
Match: A0A6J1DS87 (uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023927 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 6.4e-14
Identity = 51/134 (38.06%), Postives = 82/134 (61.19%), Query Frame = 0

Query: 3   EELNGLAEKEKGRVEYYETKVQNIAIGRIVLARLLFFSISQTSPNSSLLHCNDWWLVFTL 62
           E L  L EK++ RV+Y+E++ QNI +  ++  RL FF+ISQTS  SSLL C DWW+V  L
Sbjct: 11  EALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQTS--SSLLKCIDWWMVLGL 70

Query: 63  TCFCTFLYMLLFVHNSIILYRVERRLHAIDHQQIEIHRQISILISEEAQLNSMIVPIIVD 122
           +  C F+Y L F+    +LYRV+ ++  I  +Q EI +QI +     +QL+   V + ++
Sbjct: 71  SVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILV---ARSQLDD--VDLAME 130

Query: 123 VGHTTSTFERKVYI 137
            G ++  F+   ++
Sbjct: 131 AGDSSDGFQFSFHV 137

BLAST of HG10021842 vs. ExPASy TrEMBL
Match: A0A6J1DX74 (uncharacterized protein LOC111023953 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023953 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.3e-11
Identity = 41/106 (38.68%), Postives = 67/106 (63.21%), Query Frame = 0

Query: 4   ELNGLAEKEKGRVEYYETKVQNIAIGRIVLARLLFFSISQTSPNSSLLHCNDWWLVFTLT 63
           EL  + EK++ RV Y+E K Q I  G ++L RL FF ISQTS +     C+DWW++ +L+
Sbjct: 12  ELKDINEKQESRVRYHEAKFQKIVSGYLILTRLFFFGISQTSSSK----CHDWWVILSLS 71

Query: 64  CFCTFLYMLLFVHNSIILYRVERRLHAIDHQQIEIHRQISILISEE 110
             C+F+Y LLF+  +  LY+ + +L  I  + IE+ +QI +  +++
Sbjct: 72  LLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQD 113

BLAST of HG10021842 vs. ExPASy TrEMBL
Match: A0A0A0KM15 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139820 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 9.6e-10
Identity = 43/99 (43.43%), Postives = 60/99 (60.61%), Query Frame = 0

Query: 5   LNGLAEKEKGRVEYYETKVQNIAIGRIVLARLLFFSISQTSPNSSLLHC-NDWWLVFTLT 64
           L  LAEK++ RV YYET+ QN+AI  ++  RL F  +  TS + SLL+C +  W+VF+  
Sbjct: 15  LKFLAEKQEQRVRYYETRAQNLAIASLIWDRLFFVGMYHTSSSLSLLNCTHHLWMVFSFI 74

Query: 65  CFCTFLYMLLFVHNSIILYRVERRLHAIDHQQIEIHRQI 103
              T LY L F+    +LYR + +L  I  +QIEI  QI
Sbjct: 75  LSSTSLYFLFFLEAVFMLYRAQNQLDIISKKQIEISLQI 113

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN51471.18.0e-3560.56hypothetical protein Csa_009166 [Cucumis sativus][more]
XP_022157182.17.8e-1440.31uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncha... [more]
XP_022157130.11.3e-1338.06uncharacterized protein LOC111023927 [Momordica charantia][more]
KAG6579345.18.6e-1333.09hypothetical protein SDJN03_23793, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6579352.11.5e-1234.53hypothetical protein SDJN03_23800, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KUT03.9e-3560.56Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G562290 PE=4 SV=1[more]
A0A6J1DSQ03.8e-1440.31uncharacterized protein LOC111023958 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1DS876.4e-1438.06uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1DX741.3e-1138.68uncharacterized protein LOC111023953 isoform X2 OS=Momordica charantia OX=3673 G... [more]
A0A0A0KM159.6e-1043.43Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139820 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33287:SF8SUBFAMILY NOT NAMEDcoord: 2..111
NoneNo IPR availablePANTHERPTHR33287OS03G0453550 PROTEINcoord: 2..111

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10021842.1HG10021842.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane