HG10021706 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTATTTTTGTGGCAGGAAAGGAACAGAACAAAATGTAGCTACCTCTAAAAACCTATCCTTCGAAGAAGTCCATCAACAGCGAATAGATGATTCTCATGCCTTGTCAATTCAAAAGGAGAGAATTGAGAAACTCATCGAAGATAATCATCGTCTTCTGAGCACCATTTCTGAGTTGAAGAAAGAGTTGAAAGGTTCAAAAGTTGAACTTGAAACAATGTCAAAGTTTGTTCGCATGATGAACTCAAGCACTAATGATCTTCACATAATTTTGTCTTCTGGCAAGCAGGTTTCTGATAAGCTTGGCATTGGGATCAATCAGCATGGGAAGCAGTTCTACAAAGGTGAATCATCCTGTTAAATAATTTTGATCCAGCCCAGGATTTACCAATGTCGATTCTAATGTCAGAGACAAAGGAAACGTCAATATCTCTAATGGATCATAATGTAAAGAAGAAATGAATTTCATTATTGTGGCAAAAAAAGGTCATATTCGACCCTATTATTTCAGCCTGTATGGAAGAATCAGCCACCTATTGTCTTGGAAGTATTCTAGAGGAACCTGGCCCATTGCTAATCCTAGCAAATATGTGCATATGAACAATGAATGGAGAGTTAAGAAAGCTAGTCCTTATTTTGAGACAAGGTGTCAAGTAGCTTTCACTTCCCTTCGGTCATCTTCAAAAGAGGAATAGTACTTTGATAGTGGATGTTCTCGTCACATGACTGGTGAAAAGTCATTTGTCACCAATGTGCAACCATGCGACTCTTGCTATGTTACCTTTGGAAATGGAGCAAAAGGAAAAGTACTGGGGAAAGGTCAATTGTTGTACCCTGGACTTCCAGCATTGGAGGATGTCTTTCTTATAAAGGGGTTAACAACAAACCTAATCAGCATAAGTCAACTATGCGATCAGGGCCTTGTTGTAAGCTTCTCAACAGATAAATGTTTGGTGACTAACAAAGACAATGTGACTGTCATGTCAGTTACGCATTCTTCTGACAATTATTACTTATGGACTCCTAATGTTGTTAATCATGTTTGTAACAACCCTAGAAACAAGTGTAAGAATAGTACTCCTCTAGAGACGACTCTTGATATGATGCAATGTACTAAACTTTTACCATATCACTTTTGGGTTGATGTTATTATTACTGATCGTCATGTTTCCAATTACCTTGCCTTGAGTCAAGGTATGTGTGCCCAAATTATGAAATATGGAGGGAAAGGAAATTTAGTCGTGTGAAATATTTTCACATATTTGGTGGCACGTGTTATATTATGACAAAATATGTCTTGAGACAAAAAATACAGTATTTTTCTGGGATATTCTACCAACAATCAAACGCCTTATGATTACAAACTAAAACATGCTCTATTTTTCAAGAAGTCAAAAGGAAAGTTGATTGTCTTTCAAATTTTTGTTGACGACATAATTTTCAATAAGATGTCTCAGGAGATGGTAGAGCATTCTGTCCAACACACGCAAACTGAGCTTGAAATGAGTTTGGTCAAACAACTTACTTACGTTTTGAGATCTCAGAATAAACAGATGGAAGTTGTGGAGGTAGGTCAATGTGAATTTCTCATGAGAACCTTATATCTTTGTAAATTTGTCTTATAGCAACTAAAGATATTTGATCAATGAAAGTCAAAGTGGTTCAAGTCAGCTTTTATAAACAGGGTGAATTCTTGTCAAGGTACTCAGACATTTGGTTGTAAAATGGTTAGTAAATCAGTAAAGAAGATAAAGGCCTTCAAGAAGGGTGGTTCTCCATCAAGAGACAATGTCTATGGTGTTCGAGTGAGGGGTTTTTCTTTCTCTTTTAGTGATGCCTTTGCTACAAATTCATTTGTCAATAAAAAGAGAATTGAGCCTATGATACATAAGAAAACTAAGAAGGAAAGGTGTGTTGTTAAATGA ATGTATTTTTGTGGCAGGAAAGGAACAGAACAAAATGTAGCTACCTCTAAAAACCTATCCTTCGAAGAAGTCCATCAACAGCGAATAGATGATTCTCATGCCTTGTCAATTCAAAAGGAGAGAATTGAGAAACTCATCGAAGATAATCATCGTCTTCTGAGCACCATTTCTGAGTTGAAGAAAGAGTTGAAAGGTTCAAAAGTTGAACTTGAAACAATGTCAAAGTTTGTTCGCATGATGAACTCAAGCACTAATGATCTTCACATAATTTTGTCTTCTGGCAAGCAGGTTTCTGATAAGCTTGGCATTGGGATCAATCAGCATGGGAAGCAGTTCTACAAAGGTACTCAGACATTTGGTTGTAAAATGGTTAGTAAATCAGTAAAGAAGATAAAGGCCTTCAAGAAGGGTGGTTCTCCATCAAGAGACAATGTCTATGGTGTTCGAGTGAGGGGTTTTTCTTTCTCTTTTAGTGATGCCTTTGCTACAAATTCATTTGTCAATAAAAAGAGAATTGAGCCTATGATACATAAGAAAACTAAGAAGGAAAGGTGTGTTGTTAAATGA ATGTATTTTTGTGGCAGGAAAGGAACAGAACAAAATGTAGCTACCTCTAAAAACCTATCCTTCGAAGAAGTCCATCAACAGCGAATAGATGATTCTCATGCCTTGTCAATTCAAAAGGAGAGAATTGAGAAACTCATCGAAGATAATCATCGTCTTCTGAGCACCATTTCTGAGTTGAAGAAAGAGTTGAAAGGTTCAAAAGTTGAACTTGAAACAATGTCAAAGTTTGTTCGCATGATGAACTCAAGCACTAATGATCTTCACATAATTTTGTCTTCTGGCAAGCAGGTTTCTGATAAGCTTGGCATTGGGATCAATCAGCATGGGAAGCAGTTCTACAAAGGTACTCAGACATTTGGTTGTAAAATGGTTAGTAAATCAGTAAAGAAGATAAAGGCCTTCAAGAAGGGTGGTTCTCCATCAAGAGACAATGTCTATGGTGTTCGAGTGAGGGGTTTTTCTTTCTCTTTTAGTGATGCCTTTGCTACAAATTCATTTGTCAATAAAAAGAGAATTGAGCCTATGATACATAAGAAAACTAAGAAGGAAAGGTGTGTTGTTAAATGA MYFCGRKGTEQNVATSKNLSFEEVHQQRIDDSHALSIQKERIEKLIEDNHRLLSTISELKKELKGSKVELETMSKFVRMMNSSTNDLHIILSSGKQVSDKLGIGINQHGKQFYKGTQTFGCKMVSKSVKKIKAFKKGGSPSRDNVYGVRVRGFSFSFSDAFATNSFVNKKRIEPMIHKKTKKERCVVK Homology
BLAST of HG10021706 vs. NCBI nr
Match: KAA0059924.1 (Peptidase aspartic, catalytic [Cucumis melo var. makuwa] >TYK24870.1 Peptidase aspartic, catalytic [Cucumis melo var. makuwa]) HSP 1 Score: 75.9 bits (185), Expect = 4.2e-10 Identity = 44/106 (41.51%), Postives = 65/106 (61.32%), Query Frame = 0
BLAST of HG10021706 vs. NCBI nr
Match: KAA0050618.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK07822.1 gag-pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 75.1 bits (183), Expect = 7.2e-10 Identity = 43/101 (42.57%), Postives = 65/101 (64.36%), Query Frame = 0
BLAST of HG10021706 vs. NCBI nr
Match: KAA0025487.1 (gag-pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 74.3 bits (181), Expect = 1.2e-09 Identity = 43/112 (38.39%), Postives = 71/112 (63.39%), Query Frame = 0
BLAST of HG10021706 vs. NCBI nr
Match: TYK00378.1 (gag-pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 74.3 bits (181), Expect = 1.2e-09 Identity = 43/112 (38.39%), Postives = 71/112 (63.39%), Query Frame = 0
BLAST of HG10021706 vs. NCBI nr
Match: KAA0053131.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK01537.1 gag-pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 72.4 bits (176), Expect = 4.7e-09 Identity = 42/101 (41.58%), Postives = 66/101 (65.35%), Query Frame = 0
BLAST of HG10021706 vs. ExPASy TrEMBL
Match: A0A5A7UY03 (Peptidase aspartic, catalytic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold184G001390 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 2.0e-10 Identity = 44/106 (41.51%), Postives = 65/106 (61.32%), Query Frame = 0
BLAST of HG10021706 vs. ExPASy TrEMBL
Match: A0A5A7U5R6 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G001170 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 3.5e-10 Identity = 43/101 (42.57%), Postives = 65/101 (64.36%), Query Frame = 0
BLAST of HG10021706 vs. ExPASy TrEMBL
Match: A0A5A7SLA0 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold417G00920 PE=4 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 6.0e-10 Identity = 43/112 (38.39%), Postives = 71/112 (63.39%), Query Frame = 0
BLAST of HG10021706 vs. ExPASy TrEMBL
Match: A0A5D3BMP7 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1112G00440 PE=4 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 6.0e-10 Identity = 43/112 (38.39%), Postives = 71/112 (63.39%), Query Frame = 0
BLAST of HG10021706 vs. ExPASy TrEMBL
Match: A0A5A7UHW4 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G001050 PE=4 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 2.3e-09 Identity = 42/101 (41.58%), Postives = 66/101 (65.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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