HG10020703 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGAGACTAATGAGAGAAATTGGCAGTGAAAATGGAAGTTTTGGCTTCGCCGGCGGTGACATTTATTTGCTGTTTTGGGCGGCTCTGTTTACACTCTGCATAATCTCCACCGTAATTTTCTCTTGCTCCGACGGCATGTCAAAAGAGAGGAATTCCACGGCTGATGTTGAGCTTTACGGCGGTGGTTGTGCCGCCGGGTGCGGCGCTGGATGTGGTGCTTGA ATGGCGAGACTAATGAGAGAAATTGGCAGTGAAAATGGAAGTTTTGGCTTCGCCGGCGGTGACATTTATTTGCTGTTTTGGGCGGCTCTGTTTACACTCTGCATAATCTCCACCGTAATTTTCTCTTGCTCCGACGGCATGTCAAAAGAGAGGAATTCCACGGCTGATGTTGAGCTTTACGGCGGTGGTTGTGCCGCCGGGTGCGGCGCTGGATGTGGTGCTTGA ATGGCGAGACTAATGAGAGAAATTGGCAGTGAAAATGGAAGTTTTGGCTTCGCCGGCGGTGACATTTATTTGCTGTTTTGGGCGGCTCTGTTTACACTCTGCATAATCTCCACCGTAATTTTCTCTTGCTCCGACGGCATGTCAAAAGAGAGGAATTCCACGGCTGATGTTGAGCTTTACGGCGGTGGTTGTGCCGCCGGGTGCGGCGCTGGATGTGGTGCTTGA MARLMREIGSENGSFGFAGGDIYLLFWAALFTLCIISTVIFSCSDGMSKERNSTADVELYGGGCAAGCGAGCGA Homology
BLAST of HG10020703 vs. NCBI nr
Match: KAE8652552.1 (hypothetical protein Csa_013579 [Cucumis sativus]) HSP 1 Score: 134.0 bits (336), Expect = 5.2e-28 Identity = 64/74 (86.49%), Postives = 68/74 (91.89%), Query Frame = 0
BLAST of HG10020703 vs. NCBI nr
Match: KAG6584341.1 (hypothetical protein SDJN03_20273, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 130.6 bits (327), Expect = 5.7e-27 Identity = 67/75 (89.33%), Postives = 70/75 (93.33%), Query Frame = 0
BLAST of HG10020703 vs. NCBI nr
Match: KAG6572949.1 (hypothetical protein SDJN03_26836, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 107.8 bits (268), Expect = 4.0e-20 Identity = 56/70 (80.00%), Postives = 61/70 (87.14%), Query Frame = 0
BLAST of HG10020703 vs. NCBI nr
Match: XP_015882794.1 (uncharacterized protein LOC107418606 [Ziziphus jujuba]) HSP 1 Score: 92.8 bits (229), Expect = 1.3e-15 Identity = 47/74 (63.51%), Postives = 58/74 (78.38%), Query Frame = 0
BLAST of HG10020703 vs. NCBI nr
Match: KAF3438595.1 (hypothetical protein FNV43_RR21358 [Rhamnella rubrinervis]) HSP 1 Score: 90.5 bits (223), Expect = 6.5e-15 Identity = 44/70 (62.86%), Postives = 55/70 (78.57%), Query Frame = 0
BLAST of HG10020703 vs. ExPASy TrEMBL
Match: A0A0A0LQU7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042580 PE=4 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 2.5e-28 Identity = 64/74 (86.49%), Postives = 68/74 (91.89%), Query Frame = 0
BLAST of HG10020703 vs. ExPASy TrEMBL
Match: A0A6P3ZT85 (uncharacterized protein LOC107418606 OS=Ziziphus jujuba OX=326968 GN=LOC107418606 PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 6.4e-16 Identity = 47/74 (63.51%), Postives = 58/74 (78.38%), Query Frame = 0
BLAST of HG10020703 vs. ExPASy TrEMBL
Match: A0A803R005 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 2.4e-15 Identity = 43/74 (58.11%), Postives = 52/74 (70.27%), Query Frame = 0
BLAST of HG10020703 vs. ExPASy TrEMBL
Match: A0A803R004 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 2.4e-15 Identity = 43/74 (58.11%), Postives = 52/74 (70.27%), Query Frame = 0
BLAST of HG10020703 vs. ExPASy TrEMBL
Match: A0A2P5AQX4 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_308610 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 9.2e-15 Identity = 44/74 (59.46%), Postives = 54/74 (72.97%), Query Frame = 0
BLAST of HG10020703 vs. TAIR 10
Match: AT1G68238.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 49.7 bits (117), Expect = 1.2e-06 Identity = 25/54 (46.30%), Postives = 33/54 (61.11%), Query Frame = 0
BLAST of HG10020703 vs. TAIR 10
Match: AT3G18250.1 (Putative membrane lipoprotein ) HSP 1 Score: 44.3 bits (103), Expect = 5.0e-05 Identity = 24/58 (41.38%), Postives = 36/58 (62.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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