HG10020224 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAGTGGGCTTCGTGGTCGGTGTCTTCGGAGTTCTAATTCTGGCTCATGCTGCTTATTCCACCATCCAATGTATGCCCTAAAAAACCCATCATCATACTCTCTAATTCTAGCTTTACTTGCTTGTTTTTGTTGGTAAACCCTGCAGTTCTTGATTGATCTTGTTTTGACTGCAGATAGGAGCTTATTGAAGATCATGCAGGAAGAGTTTTCAGGCCCTCCGTTTCATGTATTTTCATCGCTCTTTTTTCTTTCTATAATCTTGTCTTTCAGCTGCTTCTACGTATCTCACTCGATTTGAGGTGTTCTTGAATTAAGGATTTTTTCTTTTCCCCTAATTTTAGGTGGCAATCGAGTTGATTCTAGGGTTAGTATTGTCCATGTGGGCTGCACTCACCGTACCAGGGAAGTTTCACTCGATAAATCCAGAAGCCGAGGAGAATAGGTACATTTTCCTGTCAAATTGTGCATGAAATGTGATTTTGCTAAATGTTTTTTCAGGATGAAATGCACCAGGTCCATTAGTTTTTCGTTTTCCCCATCGATATGATATTTACCATCTCCATAAAACGATGATACTTTAATATATTTGATTTCGTTTGCATGTTCAATGATAAGGCTTTAGTGTTGAGGGTTGTAAGCTGTTTGCCAATCCAGAAAAGCTAGCTCCGGTAGCAGAACTCTGCTAAAGGTTATCACAAAATTTAAACAGCCCAATTGTCTGGATTTGTGATCTGTCAAACATTCTTTTAGGAAATCAATCTGTGGATTCTGTCATGCATTTGATTTGAGAATTTTTAATCAAAGAGAAGTTGAGTTTACTTCCCATGAACTCAAACAAACATGTCCTACAAATAACAAAAGTGGCTAACTCTTCGGTGCAACAGAGAAAATTCACTAGCACCTGCACTTGTATTGTAACTCTATAAGAATTTTGTTGGGGAAGTAGCAGCATTTTCCTTCTTGTGACAATGCTTTTACACGTAGTCTATGATTGTTTTAAAAAAAAATAAACTAATTCTCAGCGAATGGTAAATCATGGGTCGAAACCGTAAATTGGAGACTTTGTTACCAGCTCAGTCTGTTCAATCCCCCCCCCCCCCCCCCCCCCTTCCGGGTGTCTGACAATCTACTGATGTGCCTTGTGCTTTAAAGTTCAAATAAAAAGTGCAAGGGCATATGATTTCCTAGGATCTAGTAGTCATTTTTGTTTTCTTTGAAGATTTCAGAAAGCTGCTCTTAAATATTCTAGGAGAATTAGATATGATTCATTAGAAGTTGTAGAGAATTTATCTTTTTGGGTTGTTCCCTATATTTCCATGGAATAGGTTCCATCCCTTCAATTCAAATTCTGTTCAAGTTCAGAATATTCCAATTATATGGAGTTGTTACTACTAATTTCACTATCATTACTATGTTGTTTCGGCAAGCAAGTTAAATTAATTTTAATGTAGATAAATATTTTCTCCATTGCAGGATAGTTTCTCTTCCTGCCAATCAAGATTTTATGGTCTTCAACCACCGAGGCAGATTATTTCCCAAGCAAACAGATTTGAAGCTGAAACATTGAGATCTCAGTCATGACTAAAGCAGGCCCTGGGGAATCCAAGCTGGAAGCAGAAATGGACGCTAAAGGTGCATAAAAGAGATTTTGCTGCGTTCCATCAATCTAGTGTTTCTTCAATGGTTTATTACTTTGGATACTGTGATGTTTTTCCCATGTTTTTCTTTATAGTCTCTTCCTCAAAACAAGGTTTTGGCATTGTTATTGAATTAGGCCTCTTTTGGATCGATATAACAGCTTAG ATGGGAGTGGGCTTCGTGGTCGGTGTCTTCGGAGTTCTAATTCTGGCTCATGCTGCTTATTCCACCATCCAATATAGGAGCTTATTGAAGATCATGCAGGAAGAGTTTTCAGGCCCTCCGTTTCATGTGGCAATCGAGTTGATTCTAGGGTTAGTATTGTCCATGTGGGCTGCACTCACCGTACCAGGGAAGTTTCACTCGATAAATCCAGAAGCCGAGGAGAATAGAAAAGCTAGCTCCGGTAGCAGAACTCTGCTAAAGGCCCTGGGGAATCCAAGCTGGAAGCAGAAATGGACGCTAAAGGTGCATAAAAGAGATTTTGCTGCGTTCCATCAATCTAGTGTTTCTTCAATGGTTTATTACTTTGGATACTGTGATGTTTTTCCCATGTTTTTCTTTATAGTCTCTTCCTCAAAACAAGGTTTTGGCATTGTTATTGAATTAGGCCTCTTTTGGATCGATATAACAGCTTAG ATGGGAGTGGGCTTCGTGGTCGGTGTCTTCGGAGTTCTAATTCTGGCTCATGCTGCTTATTCCACCATCCAATATAGGAGCTTATTGAAGATCATGCAGGAAGAGTTTTCAGGCCCTCCGTTTCATGTGGCAATCGAGTTGATTCTAGGGTTAGTATTGTCCATGTGGGCTGCACTCACCGTACCAGGGAAGTTTCACTCGATAAATCCAGAAGCCGAGGAGAATAGAAAAGCTAGCTCCGGTAGCAGAACTCTGCTAAAGGCCCTGGGGAATCCAAGCTGGAAGCAGAAATGGACGCTAAAGGTGCATAAAAGAGATTTTGCTGCGTTCCATCAATCTAGTGTTTCTTCAATGGTTTATTACTTTGGATACTGTGATGTTTTTCCCATGTTTTTCTTTATAGTCTCTTCCTCAAAACAAGGTTTTGGCATTGTTATTGAATTAGGCCTCTTTTGGATCGATATAACAGCTTAG MGVGFVVGVFGVLILAHAAYSTIQYRSLLKIMQEEFSGPPFHVAIELILGLVLSMWAALTVPGKFHSINPEAEENRKASSGSRTLLKALGNPSWKQKWTLKVHKRDFAAFHQSSVSSMVYYFGYCDVFPMFFFIVSSSKQGFGIVIELGLFWIDITA Homology
BLAST of HG10020224 vs. NCBI nr
Match: XP_038903501.1 (membrane magnesium transporter [Benincasa hispida]) HSP 1 Score: 151.4 bits (381), Expect = 6.6e-33 Identity = 77/79 (97.47%), Postives = 77/79 (97.47%), Query Frame = 0
BLAST of HG10020224 vs. NCBI nr
Match: XP_008442703.1 (PREDICTED: membrane magnesium transporter [Cucumis melo] >KAA0043997.1 membrane magnesium transporter [Cucumis melo var. makuwa] >TYK25143.1 membrane magnesium transporter [Cucumis melo var. makuwa]) HSP 1 Score: 151.4 bits (381), Expect = 6.6e-33 Identity = 77/79 (97.47%), Postives = 77/79 (97.47%), Query Frame = 0
BLAST of HG10020224 vs. NCBI nr
Match: XP_004137837.1 (membrane magnesium transporter [Cucumis sativus] >KGN58976.1 hypothetical protein Csa_000765 [Cucumis sativus]) HSP 1 Score: 151.0 bits (380), Expect = 8.6e-33 Identity = 76/79 (96.20%), Postives = 77/79 (97.47%), Query Frame = 0
BLAST of HG10020224 vs. NCBI nr
Match: XP_022955639.1 (membrane magnesium transporter [Cucurbita moschata] >XP_022956379.1 membrane magnesium transporter [Cucurbita moschata] >XP_023538917.1 membrane magnesium transporter [Cucurbita pepo subsp. pepo] >XP_023538918.1 membrane magnesium transporter [Cucurbita pepo subsp. pepo] >KAG6596482.1 Membrane magnesium transporter, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028030.1 Membrane magnesium transporter [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 142.9 bits (359), Expect = 2.4e-30 Identity = 73/79 (92.41%), Postives = 76/79 (96.20%), Query Frame = 0
BLAST of HG10020224 vs. NCBI nr
Match: XP_023005713.1 (membrane magnesium transporter [Cucurbita maxima] >XP_023005714.1 membrane magnesium transporter [Cucurbita maxima]) HSP 1 Score: 141.7 bits (356), Expect = 5.2e-30 Identity = 72/79 (91.14%), Postives = 76/79 (96.20%), Query Frame = 0
BLAST of HG10020224 vs. ExPASy Swiss-Prot
Match: Q2HIM5 (Membrane magnesium transporter OS=Arabidopsis thaliana OX=3702 GN=At5g03345 PE=3 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 3.1e-25 Identity = 56/76 (73.68%), Postives = 67/76 (88.16%), Query Frame = 0
BLAST of HG10020224 vs. ExPASy Swiss-Prot
Match: Q86J02 (ER membrane protein complex subunit 5 homolog OS=Dictyostelium discoideum OX=44689 GN=mmgt PE=3 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 5.1e-04 Identity = 19/58 (32.76%), Postives = 31/58 (53.45%), Query Frame = 0
BLAST of HG10020224 vs. ExPASy Swiss-Prot
Match: Q6TLE4 (ER membrane protein complex subunit 5 OS=Danio rerio OX=7955 GN=mmgt1 PE=2 SV=1) HSP 1 Score: 45.1 bits (105), Expect = 8.8e-04 Identity = 21/72 (29.17%), Postives = 43/72 (59.72%), Query Frame = 0
BLAST of HG10020224 vs. ExPASy TrEMBL
Match: A0A5D3DND5 (Membrane magnesium transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002680 PE=3 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 3.2e-33 Identity = 77/79 (97.47%), Postives = 77/79 (97.47%), Query Frame = 0
BLAST of HG10020224 vs. ExPASy TrEMBL
Match: A0A1S3B730 (membrane magnesium transporter OS=Cucumis melo OX=3656 GN=LOC103486496 PE=3 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 3.2e-33 Identity = 77/79 (97.47%), Postives = 77/79 (97.47%), Query Frame = 0
BLAST of HG10020224 vs. ExPASy TrEMBL
Match: A0A0A0LFT4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G740190 PE=3 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 4.2e-33 Identity = 76/79 (96.20%), Postives = 77/79 (97.47%), Query Frame = 0
BLAST of HG10020224 vs. ExPASy TrEMBL
Match: A0A6J1GWV2 (membrane magnesium transporter OS=Cucurbita moschata OX=3662 GN=LOC111457296 PE=3 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 1.1e-30 Identity = 73/79 (92.41%), Postives = 76/79 (96.20%), Query Frame = 0
BLAST of HG10020224 vs. ExPASy TrEMBL
Match: A0A6J1L020 (membrane magnesium transporter OS=Cucurbita maxima OX=3661 GN=LOC111498628 PE=3 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 2.5e-30 Identity = 72/79 (91.14%), Postives = 76/79 (96.20%), Query Frame = 0
BLAST of HG10020224 vs. TAIR 10
Match: AT5G03345.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Magnesium transporter (InterPro:IPR018937); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 116.3 bits (290), Expect = 2.2e-26 Identity = 56/76 (73.68%), Postives = 67/76 (88.16%), Query Frame = 0
BLAST of HG10020224 vs. TAIR 10
Match: AT5G03345.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Magnesium transporter (InterPro:IPR018937); Has 155 Blast hits to 155 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 105; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). ) HSP 1 Score: 109.8 bits (273), Expect = 2.1e-24 Identity = 54/76 (71.05%), Postives = 65/76 (85.53%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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