HG10020060 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10020060
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	NDR1/HIN1-like protein 10
Location	Chr04: 28435548 .. 28436192 (+)
RNA-Seq Expression	HG10020060
Synteny	HG10020060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGACAAACAGCCCTATTTGAACAGCAACTTCTACGGCCCCGCCGTGCCTCCTCCATCAAAGTCACACGGTCGCCGCCGCATCCTATGCACCATTCTGAAGGTGGCAATTGGATTTATTGTAGGGATTGGTATTCTATTGTTGATATTAGGACTTGTATACCGTCCAGATAAGTTGGAGTTCAATGTGATCAGTGCTAAACTCACCCAATTCAACGTCACTGACAATAAACTCTTCTACAAATTGGCTCTTAACATCACCATCCATAACCCCAACAAAAGGTACGGAGTTTACTACGACTCCAATAATATGGACCTCTTTTATAAAAACCGAAGGCTTAACATTCGCTGGCTGCCCCCGTTCTTCCAAGACACCAAAACCACCGTCGTCGTCAGCCCCGATGACTTCGAGGGTCAGCGTGAGATGCTTCTCACCGGGGATGAAATTGTTGAGTTAAACGCCGAGAAAGCTGCCGCCTTATACCCGTTTGATGTGAAATTCTTTTTCCGGTTAAGGATGAAGTCCGACAAGTTGGTGTTGAAATATAAGCCGAAGGTGTACTGTGGATTCAAGGTTCCATTGAGTAACGGTCCTAACTCTTTCGTTTTCTTTCCCAACACTGCCTGCGATTTCACTTTCTGA

mRNA sequence

ATGGCCGACAAACAGCCCTATTTGAACAGCAACTTCTACGGCCCCGCCGTGCCTCCTCCATCAAAGTCACACGGTCGCCGCCGCATCCTATGCACCATTCTGAAGGTGGCAATTGGATTTATTGTAGGGATTGGTATTCTATTGTTGATATTAGGACTTGTATACCGTCCAGATAAGTTGGAGTTCAATGTGATCAGTGCTAAACTCACCCAATTCAACGTCACTGACAATAAACTCTTCTACAAATTGGCTCTTAACATCACCATCCATAACCCCAACAAAAGGTACGGAGTTTACTACGACTCCAATAATATGGACCTCTTTTATAAAAACCGAAGGCTTAACATTCGCTGGCTGCCCCCGTTCTTCCAAGACACCAAAACCACCGTCGTCGTCAGCCCCGATGACTTCGAGGGTCAGCGTGAGATGCTTCTCACCGGGGATGAAATTGTTGAGTTAAACGCCGAGAAAGCTGCCGCCTTATACCCGTTTGATGTGAAATTCTTTTTCCGGTTAAGGATGAAGTCCGACAAGTTGGTGTTGAAATATAAGCCGAAGGTGTACTGTGGATTCAAGGTTCCATTGAGTAACGGTCCTAACTCTTTCGTTTTCTTTCCCAACACTGCCTGCGATTTCACTTTCTGA

Coding sequence (CDS)

ATGGCCGACAAACAGCCCTATTTGAACAGCAACTTCTACGGCCCCGCCGTGCCTCCTCCATCAAAGTCACACGGTCGCCGCCGCATCCTATGCACCATTCTGAAGGTGGCAATTGGATTTATTGTAGGGATTGGTATTCTATTGTTGATATTAGGACTTGTATACCGTCCAGATAAGTTGGAGTTCAATGTGATCAGTGCTAAACTCACCCAATTCAACGTCACTGACAATAAACTCTTCTACAAATTGGCTCTTAACATCACCATCCATAACCCCAACAAAAGGTACGGAGTTTACTACGACTCCAATAATATGGACCTCTTTTATAAAAACCGAAGGCTTAACATTCGCTGGCTGCCCCCGTTCTTCCAAGACACCAAAACCACCGTCGTCGTCAGCCCCGATGACTTCGAGGGTCAGCGTGAGATGCTTCTCACCGGGGATGAAATTGTTGAGTTAAACGCCGAGAAAGCTGCCGCCTTATACCCGTTTGATGTGAAATTCTTTTTCCGGTTAAGGATGAAGTCCGACAAGTTGGTGTTGAAATATAAGCCGAAGGTGTACTGTGGATTCAAGGTTCCATTGAGTAACGGTCCTAACTCTTTCGTTTTCTTTCCCAACACTGCCTGCGATTTCACTTTCTGA

Protein sequence

MADKQPYLNSNFYGPAVPPPSKSHGRRRILCTILKVAIGFIVGIGILLLILGLVYRPDKLEFNVISAKLTQFNVTDNKLFYKLALNITIHNPNKRYGVYYDSNNMDLFYKNRRLNIRWLPPFFQDTKTTVVVSPDDFEGQREMLLTGDEIVELNAEKAAALYPFDVKFFFRLRMKSDKLVLKYKPKVYCGFKVPLSNGPNSFVFFPNTACDFTF

Homology

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BLAST of HG10020060 vs. NCBI nr
Match: XP_038906030.1 (NDR1/HIN1-like protein 10 [Benincasa hispida])

HSP 1 Score: 337.4 bits (864), Expect = 8.9e-89
Identity = 163/214 (76.17%), Postives = 182/214 (85.05%), Query Frame = 0


Query: 1   MADKQPYLNSNFYGPAVPPPSKSHGRRRILCTILKVAIGFIVGIGILLLILGLVYRPDKL 60
           MAD+QPYLN NFYGPAVPPP+K+H  RRILCTILKV IG IV +GIL LILGLVYRP+KL
Sbjct: 1   MADRQPYLNGNFYGPAVPPPTKTHRGRRILCTILKVVIGLIVVVGILFLILGLVYRPEKL 60

Query: 61  EFNVISAKLTQFNVTDNKLFYKLALNITIHNPNKRYGVYYDSNNMDLFYKNRRLNIRWLP 120
           EF+V SAKLT+FN+T N+LFYKLA N+TI NPNKRY VYYD+N M + YKN+RL   WLP
Sbjct: 61  EFDVSSAKLTEFNMTANQLFYKLAFNVTIRNPNKRYRVYYDTNEMAILYKNQRLRTYWLP 120

Query: 121 PFFQDTKTTVVVSPDDFEGQREMLLTGDEIVELNAEKAAALYPFDVKFFFRLRMKSDKLV 180
            FFQDTKTT V+SPDD  GQR+M LT DEIVE NAEKAAALY  DVKFFFRLRMKS ++V
Sbjct: 121 EFFQDTKTTAVLSPDDIIGQRQMFLTHDEIVEYNAEKAAALYSIDVKFFFRLRMKSGEVV 180

Query: 181 LKYKPKVYCGFKVPLSNGPNSFVFFPNTACDFTF 215
           LK +PKVYCG KVPLSNGPNS  FFPNTACDF+F
Sbjct: 181 LKLRPKVYCGLKVPLSNGPNSVFFFPNTACDFSF 214

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BLAST of HG10020060 vs. NCBI nr
Match: KAG6580740.1 (NDR1/HIN1-like protein 10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 328.9 bits (842), Expect = 3.2e-86
Identity = 162/216 (75.00%), Postives = 182/216 (84.26%), Query Frame = 0


Query: 1   MADKQPYLNSNFYGPAVPPPSKSHGRRRILCTILKVAIGFIVGIGILLLILGLVYRPDKL 60
           MADKQPYLN+NFYGP VPP SK H  RR+LCTILKVAIGFIVG+GI+LLILGLVYRP KL
Sbjct: 1   MADKQPYLNANFYGPTVPPSSKRHRGRRVLCTILKVAIGFIVGVGIVLLILGLVYRPHKL 60

Query: 61  EFNVISAKLTQFNVTDNKLFYKLALNITIHNPNKRYGVYYDSNNMDLFYKNRRLNIRWLP 120
           EFNV SAKLTQFN+T N+L+Y L LN+TI NPNKRY VYYD+N M + YKNRRLN   LP
Sbjct: 61  EFNVTSAKLTQFNITANQLYYNLGLNVTITNPNKRYRVYYDTNEMVVLYKNRRLNSLSLP 120

Query: 121 PFFQDTKTTVVVSPDDFEGQREMLLTGDEIVELNAEKAAALYPFDVKFFFRLRMKSDKLV 180
            FFQDTK+T V+SP++FEGQR +LL GDEIVE N+EKA   YP DVKFFFRLRMKS ++V
Sbjct: 121 AFFQDTKSTAVLSPNNFEGQRLILLAGDEIVEFNSEKAEGQYPIDVKFFFRLRMKSGEVV 180

Query: 181 LKYKPKVYCGFKVPLSNGPN--SFVFFPNTACDFTF 215
           LK KPKV+CG +VPLSN PN  SFVFFPNTACDF F
Sbjct: 181 LKLKPKVHCGLRVPLSNAPNSFSFVFFPNTACDFQF 216

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BLAST of HG10020060 vs. NCBI nr
Match: XP_022935274.1 (NDR1/HIN1-like protein 10 [Cucurbita moschata])

HSP 1 Score: 326.6 bits (836), Expect = 1.6e-85
Identity = 161/216 (74.54%), Postives = 181/216 (83.80%), Query Frame = 0


Query: 1   MADKQPYLNSNFYGPAVPPPSKSHGRRRILCTILKVAIGFIVGIGILLLILGLVYRPDKL 60
           MADKQPYLN+NFYGP VPP SK H  RR+LCTILKVAIGFIVG+GI+LLILGLVYRP KL
Sbjct: 1   MADKQPYLNANFYGPTVPPSSKRHRGRRVLCTILKVAIGFIVGVGIVLLILGLVYRPHKL 60

Query: 61  EFNVISAKLTQFNVTDNKLFYKLALNITIHNPNKRYGVYYDSNNMDLFYKNRRLNIRWLP 120
           EFNV SAKLTQFN+T N+L+Y L LN+TI NPNKRY VYYD+N M + YKNRRLN   LP
Sbjct: 61  EFNVTSAKLTQFNITANQLYYNLGLNVTITNPNKRYRVYYDTNEMVVLYKNRRLNSLSLP 120

Query: 121 PFFQDTKTTVVVSPDDFEGQREMLLTGDEIVELNAEKAAALYPFDVKFFFRLRMKSDKLV 180
            FFQDTK+T V+SP++FEGQR +LL GDEIVE N+EKA   YP DVKFFFRLRMKS ++V
Sbjct: 121 AFFQDTKSTAVLSPNNFEGQRLILLAGDEIVEFNSEKAEGQYPIDVKFFFRLRMKSGEVV 180

Query: 181 LKYKPKVYCGFKVPLSNGPN--SFVFFPNTACDFTF 215
           LK KPKV+CG +VPLSN P   SFVFFPNTACDF F
Sbjct: 181 LKLKPKVHCGLRVPLSNAPKSFSFVFFPNTACDFQF 216

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BLAST of HG10020060 vs. NCBI nr
Match: XP_023528863.1 (NDR1/HIN1-like protein 10 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 326.2 bits (835), Expect = 2.0e-85
Identity = 158/214 (73.83%), Postives = 179/214 (83.64%), Query Frame = 0


Query: 1   MADKQPYLNSNFYGPAVPPPSKSHGRRRILCTILKVAIGFIVGIGILLLILGLVYRPDKL 60
           MADKQPYLN+NFYGP VPP SK H  RR+LCTILKVAIGFIVG+GI+LLILG+VYRP KL
Sbjct: 1   MADKQPYLNANFYGPTVPPSSKRHRGRRVLCTILKVAIGFIVGVGIVLLILGIVYRPHKL 60

Query: 61  EFNVISAKLTQFNVTDNKLFYKLALNITIHNPNKRYGVYYDSNNMDLFYKNRRLNIRWLP 120
           EFNV SAKLTQFN+T N+L+Y L LN+TI NPNKRY VYYD+N M + YKNRRLN   LP
Sbjct: 61  EFNVTSAKLTQFNITANQLYYNLGLNVTITNPNKRYRVYYDTNEMVVLYKNRRLNSLSLP 120

Query: 121 PFFQDTKTTVVVSPDDFEGQREMLLTGDEIVELNAEKAAALYPFDVKFFFRLRMKSDKLV 180
            FFQDTK+T V+SP++FEGQR +LL GDEIVE N+EKA   YP DVKF FRLRMKS ++V
Sbjct: 121 AFFQDTKSTAVLSPNNFEGQRLILLAGDEIVEFNSEKAEGQYPIDVKFSFRLRMKSGEVV 180

Query: 181 LKYKPKVYCGFKVPLSNGPNSFVFFPNTACDFTF 215
           LK KPKV+CG +VP SN P SFVFFPNTACDF F
Sbjct: 181 LKLKPKVHCGLRVPFSNAPKSFVFFPNTACDFQF 214

[Close]

BLAST of HG10020060 vs. NCBI nr
Match: XP_022983103.1 (NDR1/HIN1-like protein 10 [Cucurbita maxima])

HSP 1 Score: 325.9 bits (834), Expect = 2.7e-85
Identity = 157/214 (73.36%), Postives = 179/214 (83.64%), Query Frame = 0


Query: 1   MADKQPYLNSNFYGPAVPPPSKSHGRRRILCTILKVAIGFIVGIGILLLILGLVYRPDKL 60
           MADKQPYLN+NFYGP VPP SK H  RR+LCTILKVAIGFIVG+GI+LLILG+VYRP KL
Sbjct: 1   MADKQPYLNANFYGPTVPPSSKRHRGRRVLCTILKVAIGFIVGVGIVLLILGVVYRPHKL 60

Query: 61  EFNVISAKLTQFNVTDNKLFYKLALNITIHNPNKRYGVYYDSNNMDLFYKNRRLNIRWLP 120
           EFNV +AKLTQFN+T N+L+Y L LN+TI NPN RY VYYD+N M + YKNRRLN   LP
Sbjct: 61  EFNVTTAKLTQFNITANQLYYNLGLNVTIRNPNSRYRVYYDTNEMVVLYKNRRLNSLSLP 120

Query: 121 PFFQDTKTTVVVSPDDFEGQREMLLTGDEIVELNAEKAAALYPFDVKFFFRLRMKSDKLV 180
            FFQDTK++ V+SP+ FEGQR +LL GDEIVE N+EKA   YP DVKFFFRLRMKS ++V
Sbjct: 121 AFFQDTKSSAVLSPNKFEGQRLILLAGDEIVEFNSEKAEGQYPIDVKFFFRLRMKSGEVV 180

Query: 181 LKYKPKVYCGFKVPLSNGPNSFVFFPNTACDFTF 215
           LK KPKV+CG +VPLSN P SFVFFPNTACDF F
Sbjct: 181 LKLKPKVHCGLRVPLSNAPKSFVFFPNTACDFQF 214

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BLAST of HG10020060 vs. ExPASy Swiss-Prot
Match: Q9SJ52 (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 4.7e-32
Identity = 90/229 (39.30%), Postives = 128/229 (55.90%), Query Frame = 0


Query: 1   MADKQPYLNSNFYGPAVPPPS------KSHGRRRILCTI---LKVAIGFIVGIGILLLIL 60
           MA +QP LN  FYGP+VPPP+      + HGR    C +   +KV I  IV +G+  LI 
Sbjct: 1   MAAEQP-LNGAFYGPSVPPPAPKGYYRRGHGRGCGCCLLSLFVKVIISLIVILGVAALIF 60

Query: 61  GLVYRPDKLEFNVISAKLTQFNVT--DNKLFYKLALNITIHNPNKRYGVYYDSNNMDLFY 120
            L+ RP  ++F+V  A LT+F+ T  DN L Y LAL + + NPNKR G+YYD      +Y
Sbjct: 61  WLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPVRNPNKRIGLYYDRIEAHAYY 120

Query: 121 KNRRLNIRWLPPFFQDTKTTVVVSPDDFEGQREMLLTGDEIVELNAEKAAALYPFDVKFF 180
           + +R +   L PF+Q  K T V++P  F+GQ  ++    +   LNAE+ + +Y  ++KF 
Sbjct: 121 EGKRFSTITLTPFYQGHKNTTVLTP-TFQGQNLVIFNAGQSRTLNAERISGVYNIEIKFR 180

Query: 181 FRLRMK-SDKLVLKYKPKVYC-GFKVPL--SNGPNSFVFFPNTACDFTF 215
            R+R K  D    + KPKV C   ++PL  SNG  +        CDF F
Sbjct: 181 LRVRFKLGDLKFRRIKPKVDCDDLRLPLSTSNGTTTTSTVFPIKCDFDF 227

[Close]

BLAST of HG10020060 vs. ExPASy Swiss-Prot
Match: Q9FNH6 (NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.0e-30
Identity = 89/230 (38.70%), Postives = 124/230 (53.91%), Query Frame = 0


Query: 8   LNSNFYGPAVPPPSK---SHGRRR----------------ILCTILKVAIGFIVGIGILL 67
           LN  +YGP++PPP K   SHGRR                 IL  I  + I   V +GI  
Sbjct: 4   LNGAYYGPSIPPPKKVSHSHGRRGGGCGCLGDCLGCCGCCILSVIFNILITIAVLLGIAA 63

Query: 68  LILGLVYRPDKLEFNVISAKLTQFNV-TDNKLFYKLALNITIHNPNKRYGVYYDSNNMDL 127
           LI+ L++RP+ ++F+V  AKLT+F +   N L Y L LN TI NPN+R GVYYD   +  
Sbjct: 64  LIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNFTIRNPNRRIGVYYDEIEVRG 123

Query: 128 FYKNRRLNI-RWLPPFFQDTKTTVVVSPDDFEGQREMLLTGDEIVELNAEKAAALYPFDV 187
           +Y ++R  +   +  F+Q  K T VV      GQ+ +LL G E  +LN +  + +Y  D 
Sbjct: 124 YYGDQRFGMSNNISKFYQGHKNTTVVG-TKLVGQQLVLLDGGERKDLNEDVNSQIYRIDA 183

Query: 188 KFFFRLRMKSDKL-VLKYKPKVYCGFKVPL-SNGPNSFVFFPNTACDFTF 215
           K   ++R K   +   ++KPK+ C  KVPL SN  + FVF P T CD  F
Sbjct: 184 KLRLKIRFKFGLIKSWRFKPKIKCDLKVPLTSNSTSGFVFQP-TKCDVDF 231

[Close]

BLAST of HG10020060 vs. ExPASy Swiss-Prot
Match: Q9SRN1 (NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 8.5e-26
Identity = 81/239 (33.89%), Postives = 117/239 (48.95%), Query Frame = 0


Query: 1   MADKQPYLNSNFYGPAVPPPSKSHGRRR----------------------ILCTILKVAI 60
           M  KQPYLN  +YGP++PPP K+H                          IL  I  + I
Sbjct: 1   MGSKQPYLNGAYYGPSIPPPPKAHRSYNSPGFGCCCFSCLGSCLRCCGCCILSLICNILI 60

Query: 61  GFIVGIGILLLILGLVYRPDKLEFNVISAKLTQFNV-TDNKLFYKLALNITIHNPNKRYG 120
              V +G+  LIL L++RP+ ++F V  A L +F+   +N L Y L LN TI NPN+R G
Sbjct: 61  AVAVILGVAALILWLIFRPNAVKFYVADANLNRFSFDPNNNLHYSLDLNFTIRNPNQRVG 120

Query: 121 VYYDSNNMDLFYKNRRLNIRWLPPFFQDTKTTVVVSPDDFEGQREMLLTGDEIVELNAEK 180
           VYYD  ++  +Y ++R     +  F+Q  K T V+     EGQ  ++L      +L  ++
Sbjct: 121 VYYDEFSVSGYYGDQRFGSANVSSFYQGHKNTTVIL-TKIEGQNLVVLGDGARTDLKDDE 180

Query: 181 AAALYPFDVKFFFRLRMKSDKL-VLKYKPKVYC-GFKVPL--SNGPNSFVFFPNTACDF 213
            + +Y  + K    +R K   +   K KPK+ C   K+PL  SN    F F P   CDF
Sbjct: 181 KSGIYRINAKLRLSVRFKFWFIKSWKLKPKIKCDDLKIPLGSSNSTGGFKFQP-VQCDF 237

[Close]

BLAST of HG10020060 vs. ExPASy Swiss-Prot
Match: Q9C615 (Putative syntaxin-24 OS=Arabidopsis thaliana OX=3702 GN=SYP24 PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.2e-14
Identity = 49/148 (33.11%), Postives = 82/148 (55.41%), Query Frame = 0


Query: 56  RPDKLEFNVISAKLTQFNV-TDNKLFYKLALNITIHNPNKRYGVYYDSNNMDLFYKNRRL 115
           R + ++F V  A+LT F++ ++N L Y L+LN++I N     G++YD     ++Y N+RL
Sbjct: 3   RSNDVKFQVYDAELTHFDLESNNNLQYSLSLNLSIRNSKSSIGIHYDRFEATVYYMNQRL 62

Query: 116 NIRWLPPFFQDTKTTVVVSPDDFEGQREMLLTGDEIVELNAEKAAALYPFDVKFFFRLRM 175
               +P F+  +K T+++    FEGQ  +LL G+E  +   ++   +Y  DVK     R+
Sbjct: 63  GAVPMPLFYLGSKNTMLLRA-LFEGQTLVLLKGNERKKFEDDQKTGVYRIDVKLSINFRV 122

Query: 176 KSDKLVL-KYKPKVYCGFKVPLSNGPNS 202
               LV    KP V C  K+PL+ G ++
Sbjct: 123 MVLHLVTWPMKPVVRCHLKIPLALGSSN 149

[Close]

BLAST of HG10020060 vs. ExPASy Swiss-Prot
Match: Q8LD98 (NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=NHL6 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 6.1e-08
Identity = 51/201 (25.37%), Postives = 96/201 (47.76%), Query Frame = 0


Query: 15  PAVPPPSKSHGRRRILCTILKVAIGFIVGIGILLLILGLVYRPDKLEFNVISAKLTQFNV 74
           P  PP  +     R  C      +  +V +G  + IL LV++P   ++++   +LT+F +
Sbjct: 51  PLAPPKKRRSCCCRCFCYTFCFLLLLVVAVGASIGILYLVFKPKLPDYSIDRLQLTRFAL 110

Query: 75  T-DNKLFYKLALNITIHNPNKRYGVYY-DSNNMDLFYKNRRLNIRWLPPFFQDTKTTVVV 134
             D+ L     + IT  NPN++ G+YY D + + ++Y   +L+   LP F+Q  + T V+
Sbjct: 111 NQDSSLTTAFNVTITAKNPNEKIGIYYEDGSKITVWYMEHQLSNGSLPKFYQGHENTTVI 170

Query: 135 SPDDFEGQREMLLTGDEIVELNAEKAAALYPFDVKFFFRLRMKSDKLVL-KYKPKVYCGF 194
              +  GQ +        +E   ++   + P  ++    +R+K  KL L + +  V CG 
Sbjct: 171 YV-EMTGQTQNASGLRTTLEEQQQRTGNI-PLRIRVNQPVRVKFGKLKLFEVRFLVRCGV 230

Query: 195 KVPLSNGPNSFVFFPNTACDF 213
            V  S   N+ +   +++C F
Sbjct: 231 FVD-SLATNNVIKIQSSSCKF 248

[Close]

BLAST of HG10020060 vs. ExPASy TrEMBL
Match: A0A6J1F4Y9 (NDR1/HIN1-like protein 10 OS=Cucurbita moschata OX=3662 GN=LOC111442212 PE=4 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 7.6e-86
Identity = 161/216 (74.54%), Postives = 181/216 (83.80%), Query Frame = 0


Query: 1   MADKQPYLNSNFYGPAVPPPSKSHGRRRILCTILKVAIGFIVGIGILLLILGLVYRPDKL 60
           MADKQPYLN+NFYGP VPP SK H  RR+LCTILKVAIGFIVG+GI+LLILGLVYRP KL
Sbjct: 1   MADKQPYLNANFYGPTVPPSSKRHRGRRVLCTILKVAIGFIVGVGIVLLILGLVYRPHKL 60

Query: 61  EFNVISAKLTQFNVTDNKLFYKLALNITIHNPNKRYGVYYDSNNMDLFYKNRRLNIRWLP 120
           EFNV SAKLTQFN+T N+L+Y L LN+TI NPNKRY VYYD+N M + YKNRRLN   LP
Sbjct: 61  EFNVTSAKLTQFNITANQLYYNLGLNVTITNPNKRYRVYYDTNEMVVLYKNRRLNSLSLP 120

Query: 121 PFFQDTKTTVVVSPDDFEGQREMLLTGDEIVELNAEKAAALYPFDVKFFFRLRMKSDKLV 180
            FFQDTK+T V+SP++FEGQR +LL GDEIVE N+EKA   YP DVKFFFRLRMKS ++V
Sbjct: 121 AFFQDTKSTAVLSPNNFEGQRLILLAGDEIVEFNSEKAEGQYPIDVKFFFRLRMKSGEVV 180

Query: 181 LKYKPKVYCGFKVPLSNGPN--SFVFFPNTACDFTF 215
           LK KPKV+CG +VPLSN P   SFVFFPNTACDF F
Sbjct: 181 LKLKPKVHCGLRVPLSNAPKSFSFVFFPNTACDFQF 216

[Close]

BLAST of HG10020060 vs. ExPASy TrEMBL
Match: A0A6J1J6T7 (NDR1/HIN1-like protein 10 OS=Cucurbita maxima OX=3661 GN=LOC111481750 PE=4 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 1.3e-85
Identity = 157/214 (73.36%), Postives = 179/214 (83.64%), Query Frame = 0


Query: 1   MADKQPYLNSNFYGPAVPPPSKSHGRRRILCTILKVAIGFIVGIGILLLILGLVYRPDKL 60
           MADKQPYLN+NFYGP VPP SK H  RR+LCTILKVAIGFIVG+GI+LLILG+VYRP KL
Sbjct: 1   MADKQPYLNANFYGPTVPPSSKRHRGRRVLCTILKVAIGFIVGVGIVLLILGVVYRPHKL 60

Query: 61  EFNVISAKLTQFNVTDNKLFYKLALNITIHNPNKRYGVYYDSNNMDLFYKNRRLNIRWLP 120
           EFNV +AKLTQFN+T N+L+Y L LN+TI NPN RY VYYD+N M + YKNRRLN   LP
Sbjct: 61  EFNVTTAKLTQFNITANQLYYNLGLNVTIRNPNSRYRVYYDTNEMVVLYKNRRLNSLSLP 120

Query: 121 PFFQDTKTTVVVSPDDFEGQREMLLTGDEIVELNAEKAAALYPFDVKFFFRLRMKSDKLV 180
            FFQDTK++ V+SP+ FEGQR +LL GDEIVE N+EKA   YP DVKFFFRLRMKS ++V
Sbjct: 121 AFFQDTKSSAVLSPNKFEGQRLILLAGDEIVEFNSEKAEGQYPIDVKFFFRLRMKSGEVV 180

Query: 181 LKYKPKVYCGFKVPLSNGPNSFVFFPNTACDFTF 215
           LK KPKV+CG +VPLSN P SFVFFPNTACDF F
Sbjct: 181 LKLKPKVHCGLRVPLSNAPKSFVFFPNTACDFQF 214

[Close]

BLAST of HG10020060 vs. ExPASy TrEMBL
Match: A0A5A7TKJ3 (Protein YLS9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004480 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 1.3e-77
Identity = 149/218 (68.35%), Postives = 174/218 (79.82%), Query Frame = 0


Query: 1   MADKQPYLNSNFYGPAVPPPSKSHGRRRILCTILKVAIGFIVGIGILLLILGLVYRPDKL 60
           MAD+QP+LNSNFYGPAVPPPSKS   RR+LCTIL VAIGFIV +GILLLILGL+Y P KL
Sbjct: 2   MADRQPHLNSNFYGPAVPPPSKSRRGRRLLCTILMVAIGFIVAVGILLLILGLIYSPHKL 61

Query: 61  EFNVISAKLTQFNVT--DNKLFYKLALNITIHNPNKRYGVYYDSNNMDLFYKNRRLNIRW 120
           EFNV SA+LTQFN+T   N+L Y LALN+TI NPNKRY VYYD+N M + YKN+RL   W
Sbjct: 62  EFNVSSARLTQFNLTTGSNQLRYTLALNVTIRNPNKRYRVYYDANEMAILYKNQRLETHW 121

Query: 121 LPPFFQDTKTTVVVSPDDFEGQREMLLTGDEIVELNAEKAAALYPFDVKFFFRLRMKSDK 180
           LP FFQ++K+TVVV P++F+GQ+ M L  DE VE NAEKA  +Y  DVKFFFRLRMKS +
Sbjct: 122 LPLFFQESKSTVVVGPNNFDGQKLMFLNSDEHVEFNAEKANGIYSIDVKFFFRLRMKSGQ 181

Query: 181 LVLKYKPKVYCGFKVPLSN--GPNSFVFFPNTACDFTF 215
           +VLK+KPKVYCG KVPL +   PN    F NTACDF+F
Sbjct: 182 VVLKFKPKVYCGLKVPLGSDIDPNMISLFSNTACDFSF 219

[Close]

BLAST of HG10020060 vs. ExPASy TrEMBL
Match: A0A1S3B8E0 (protein YLS9-like OS=Cucumis melo OX=3656 GN=LOC103487150 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 1.3e-77
Identity = 149/218 (68.35%), Postives = 174/218 (79.82%), Query Frame = 0


Query: 1   MADKQPYLNSNFYGPAVPPPSKSHGRRRILCTILKVAIGFIVGIGILLLILGLVYRPDKL 60
           MAD+QP+LNSNFYGPAVPPPSKS   RR+LCTIL VAIGFIV +GILLLILGL+Y P KL
Sbjct: 1   MADRQPHLNSNFYGPAVPPPSKSRRGRRLLCTILMVAIGFIVAVGILLLILGLIYSPHKL 60

Query: 61  EFNVISAKLTQFNVT--DNKLFYKLALNITIHNPNKRYGVYYDSNNMDLFYKNRRLNIRW 120
           EFNV SA+LTQFN+T   N+L Y LALN+TI NPNKRY VYYD+N M + YKN+RL   W
Sbjct: 61  EFNVSSARLTQFNLTTGSNQLRYTLALNVTIRNPNKRYRVYYDANEMAILYKNQRLETHW 120

Query: 121 LPPFFQDTKTTVVVSPDDFEGQREMLLTGDEIVELNAEKAAALYPFDVKFFFRLRMKSDK 180
           LP FFQ++K+TVVV P++F+GQ+ M L  DE VE NAEKA  +Y  DVKFFFRLRMKS +
Sbjct: 121 LPLFFQESKSTVVVGPNNFDGQKLMFLNSDEHVEFNAEKANGIYSIDVKFFFRLRMKSGQ 180

Query: 181 LVLKYKPKVYCGFKVPLSN--GPNSFVFFPNTACDFTF 215
           +VLK+KPKVYCG KVPL +   PN    F NTACDF+F
Sbjct: 181 VVLKFKPKVYCGLKVPLGSDIDPNMISLFSNTACDFSF 218

[Close]

BLAST of HG10020060 vs. ExPASy TrEMBL
Match: A0A0A0LB18 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G779000 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 2.9e-77
Identity = 152/219 (69.41%), Postives = 173/219 (79.00%), Query Frame = 0


Query: 1   MADKQPYLNSNFYGPAVPPPSKSHGRRRILCTILKVAIGFIVGIGILLLILGLVYRPDKL 60
           MAD+QP+LNSNFYGPAVPPPSKS   RRILCTIL VAIG IVG GILLLILGLVY P KL
Sbjct: 1   MADRQPHLNSNFYGPAVPPPSKSRRGRRILCTILMVAIGLIVGAGILLLILGLVYSPHKL 60

Query: 61  EFNVISAKLTQFNVT---DNKLFYKLALNITIHNPNKRYGVYYDSNNMDLFYKNRRLNIR 120
            FNV SA+LTQFN+T    N+L Y LALN+TI NPNKRY VYYD N M + YKN+RL  +
Sbjct: 61  VFNVSSARLTQFNLTTTSSNQLHYSLALNVTIRNPNKRYRVYYDYNEMAVLYKNQRLATQ 120

Query: 121 WLPPFFQDTKTTVVVSPDDFEGQREMLLTGDEIVELNAEKAAALYPFDVKFFFRLRMKSD 180
           WLP FFQ+TK+TVVVSP++F+GQ+ M LT DE VE NAEKA  +Y  DVKFFFRLRMKS 
Sbjct: 121 WLPSFFQETKSTVVVSPNNFDGQKLMFLTSDEHVEFNAEKANGIYSIDVKFFFRLRMKSG 180

Query: 181 KLVLKYKPKVYCGFKVPLSN--GPNSFVFFPNTACDFTF 215
           ++VLK+KPKVYCG KVPL +   P S   F NT CDF+F
Sbjct: 181 QVVLKFKPKVYCGLKVPLGSDIDPKSISLFSNTDCDFSF 219

[Close]

BLAST of HG10020060 vs. TAIR 10
Match: AT2G35980.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 139.4 bits (350), Expect = 3.3e-33
Identity = 90/229 (39.30%), Postives = 128/229 (55.90%), Query Frame = 0


Query: 1   MADKQPYLNSNFYGPAVPPPS------KSHGRRRILCTI---LKVAIGFIVGIGILLLIL 60
           MA +QP LN  FYGP+VPPP+      + HGR    C +   +KV I  IV +G+  LI 
Sbjct: 1   MAAEQP-LNGAFYGPSVPPPAPKGYYRRGHGRGCGCCLLSLFVKVIISLIVILGVAALIF 60

Query: 61  GLVYRPDKLEFNVISAKLTQFNVT--DNKLFYKLALNITIHNPNKRYGVYYDSNNMDLFY 120
            L+ RP  ++F+V  A LT+F+ T  DN L Y LAL + + NPNKR G+YYD      +Y
Sbjct: 61  WLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPVRNPNKRIGLYYDRIEAHAYY 120

Query: 121 KNRRLNIRWLPPFFQDTKTTVVVSPDDFEGQREMLLTGDEIVELNAEKAAALYPFDVKFF 180
           + +R +   L PF+Q  K T V++P  F+GQ  ++    +   LNAE+ + +Y  ++KF 
Sbjct: 121 EGKRFSTITLTPFYQGHKNTTVLTP-TFQGQNLVIFNAGQSRTLNAERISGVYNIEIKFR 180

Query: 181 FRLRMK-SDKLVLKYKPKVYC-GFKVPL--SNGPNSFVFFPNTACDFTF 215
            R+R K  D    + KPKV C   ++PL  SNG  +        CDF F
Sbjct: 181 LRVRFKLGDLKFRRIKPKVDCDDLRLPLSTSNGTTTTSTVFPIKCDFDF 227

[Close]

BLAST of HG10020060 vs. TAIR 10
Match: AT5G06320.1 (NDR1/HIN1-like 3 )

HSP 1 Score: 134.0 bits (336), Expect = 1.4e-31
Identity = 89/230 (38.70%), Postives = 124/230 (53.91%), Query Frame = 0


Query: 8   LNSNFYGPAVPPPSK---SHGRRR----------------ILCTILKVAIGFIVGIGILL 67
           LN  +YGP++PPP K   SHGRR                 IL  I  + I   V +GI  
Sbjct: 4   LNGAYYGPSIPPPKKVSHSHGRRGGGCGCLGDCLGCCGCCILSVIFNILITIAVLLGIAA 63

Query: 68  LILGLVYRPDKLEFNVISAKLTQFNV-TDNKLFYKLALNITIHNPNKRYGVYYDSNNMDL 127
           LI+ L++RP+ ++F+V  AKLT+F +   N L Y L LN TI NPN+R GVYYD   +  
Sbjct: 64  LIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNFTIRNPNRRIGVYYDEIEVRG 123

Query: 128 FYKNRRLNI-RWLPPFFQDTKTTVVVSPDDFEGQREMLLTGDEIVELNAEKAAALYPFDV 187
           +Y ++R  +   +  F+Q  K T VV      GQ+ +LL G E  +LN +  + +Y  D 
Sbjct: 124 YYGDQRFGMSNNISKFYQGHKNTTVVG-TKLVGQQLVLLDGGERKDLNEDVNSQIYRIDA 183

Query: 188 KFFFRLRMKSDKL-VLKYKPKVYCGFKVPL-SNGPNSFVFFPNTACDFTF 215
           K   ++R K   +   ++KPK+ C  KVPL SN  + FVF P T CD  F
Sbjct: 184 KLRLKIRFKFGLIKSWRFKPKIKCDLKVPLTSNSTSGFVFQP-TKCDVDF 231

[Close]

BLAST of HG10020060 vs. TAIR 10
Match: AT3G11650.1 (NDR1/HIN1-like 2 )

HSP 1 Score: 118.6 bits (296), Expect = 6.0e-27
Identity = 81/239 (33.89%), Postives = 117/239 (48.95%), Query Frame = 0


Query: 1   MADKQPYLNSNFYGPAVPPPSKSHGRRR----------------------ILCTILKVAI 60
           M  KQPYLN  +YGP++PPP K+H                          IL  I  + I
Sbjct: 1   MGSKQPYLNGAYYGPSIPPPPKAHRSYNSPGFGCCCFSCLGSCLRCCGCCILSLICNILI 60

Query: 61  GFIVGIGILLLILGLVYRPDKLEFNVISAKLTQFNV-TDNKLFYKLALNITIHNPNKRYG 120
              V +G+  LIL L++RP+ ++F V  A L +F+   +N L Y L LN TI NPN+R G
Sbjct: 61  AVAVILGVAALILWLIFRPNAVKFYVADANLNRFSFDPNNNLHYSLDLNFTIRNPNQRVG 120

Query: 121 VYYDSNNMDLFYKNRRLNIRWLPPFFQDTKTTVVVSPDDFEGQREMLLTGDEIVELNAEK 180
           VYYD  ++  +Y ++R     +  F+Q  K T V+     EGQ  ++L      +L  ++
Sbjct: 121 VYYDEFSVSGYYGDQRFGSANVSSFYQGHKNTTVIL-TKIEGQNLVVLGDGARTDLKDDE 180

Query: 181 AAALYPFDVKFFFRLRMKSDKL-VLKYKPKVYC-GFKVPL--SNGPNSFVFFPNTACDF 213
            + +Y  + K    +R K   +   K KPK+ C   K+PL  SN    F F P   CDF
Sbjct: 181 KSGIYRINAKLRLSVRFKFWFIKSWKLKPKIKCDDLKIPLGSSNSTGGFKFQP-VQCDF 237

[Close]

BLAST of HG10020060 vs. TAIR 10
Match: AT2G35460.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 108.2 bits (269), Expect = 8.2e-24
Identity = 77/232 (33.19%), Postives = 116/232 (50.00%), Query Frame = 0


Query: 8   LNSNFYGPAVPPPSK---SHGRRR--------------ILC-------TILKVAIGFIVG 67
           LN   YGP + PP K   SHGRR               +LC        I  + IG +V 
Sbjct: 5   LNGASYGPPIKPPVKTYYSHGRRGSDVGCGICGCFSSCLLCCGGCLVNIICNILIGVLVC 64

Query: 68  IGILLLILGLVYRPDKLEFNVISAKLT--QFNVTDNKLFYKLALNITIHNPNKRYGVYYD 127
           +G++ LIL  + RP+ ++F V  A LT  +F+   + L Y ++LN +I NPN+R G++YD
Sbjct: 65  LGVVALILWFILRPNVVKFQVTEADLTRFEFDPRSHNLHYNISLNFSIRNPNQRLGIHYD 124

Query: 128 SNNMDLFYKNRRLNIRWLPPFFQDTKTTVVVSPDDFEGQREMLLTGDEIVELNAEKAAAL 187
              +  +Y ++R +   +  F+Q  K T VV   +  GQ+ +LL      +   ++ + +
Sbjct: 125 QLEVRGYYGDQRFSAANMTSFYQGHKNTTVVG-TELNGQKLVLLGAGGRRDFREDRRSGV 184

Query: 188 YPFDVKFFFRLRMKSDKL-VLKYKPKVYCGFKVPLSNGPNS--FVFFPNTAC 211
           Y  DVK  F+LR K   L     +PK+ C  KVPLS   +   F F P T C
Sbjct: 185 YRIDVKLRFKLRFKFGFLNSWAVRPKIKCHLKVPLSTSSSDERFQFHP-TKC 234

[Close]

BLAST of HG10020060 vs. TAIR 10
Match: AT1G32270.1 (syntaxin, putative )

HSP 1 Score: 81.6 bits (200), Expect = 8.2e-16
Identity = 49/148 (33.11%), Postives = 82/148 (55.41%), Query Frame = 0


Query: 56  RPDKLEFNVISAKLTQFNV-TDNKLFYKLALNITIHNPNKRYGVYYDSNNMDLFYKNRRL 115
           R + ++F V  A+LT F++ ++N L Y L+LN++I N     G++YD     ++Y N+RL
Sbjct: 3   RSNDVKFQVYDAELTHFDLESNNNLQYSLSLNLSIRNSKSSIGIHYDRFEATVYYMNQRL 62

Query: 116 NIRWLPPFFQDTKTTVVVSPDDFEGQREMLLTGDEIVELNAEKAAALYPFDVKFFFRLRM 175
               +P F+  +K T+++    FEGQ  +LL G+E  +   ++   +Y  DVK     R+
Sbjct: 63  GAVPMPLFYLGSKNTMLLRA-LFEGQTLVLLKGNERKKFEDDQKTGVYRIDVKLSINFRV 122

Query: 176 KSDKLVL-KYKPKVYCGFKVPLSNGPNS 202
               LV    KP V C  K+PL+ G ++
Sbjct: 123 MVLHLVTWPMKPVVRCHLKIPLALGSSN 149

The following BLAST results are available for this feature:

BLAST of HG10020060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906030.1	8.9e-89	76.17	NDR1/HIN1-like protein 10 [Benincasa hispida]	[more]
KAG6580740.1	3.2e-86	75.00	NDR1/HIN1-like protein 10, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022935274.1	1.6e-85	74.54	NDR1/HIN1-like protein 10 [Cucurbita moschata]	[more]
XP_023528863.1	2.0e-85	73.83	NDR1/HIN1-like protein 10 [Cucurbita pepo subsp. pepo]	[more]
XP_022983103.1	2.7e-85	73.36	NDR1/HIN1-like protein 10 [Cucurbita maxima]	[more]

BLAST of HG10020060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJ52	4.7e-32	39.30	NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1	[more]
Q9FNH6	2.0e-30	38.70	NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1	[more]
Q9SRN1	8.5e-26	33.89	NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1	[more]
Q9C615	1.2e-14	33.11	Putative syntaxin-24 OS=Arabidopsis thaliana OX=3702 GN=SYP24 PE=3 SV=1	[more]
Q8LD98	6.1e-08	25.37	NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=NHL6 PE=1 SV=1	[more]

BLAST of HG10020060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F4Y9	7.6e-86	74.54	NDR1/HIN1-like protein 10 OS=Cucurbita moschata OX=3662 GN=LOC111442212 PE=4 SV=...	[more]
A0A6J1J6T7	1.3e-85	73.36	NDR1/HIN1-like protein 10 OS=Cucurbita maxima OX=3661 GN=LOC111481750 PE=4 SV=1	[more]
A0A5A7TKJ3	1.3e-77	68.35	Protein YLS9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00...	[more]
A0A1S3B8E0	1.3e-77	68.35	protein YLS9-like OS=Cucumis melo OX=3656 GN=LOC103487150 PE=4 SV=1	[more]
A0A0A0LB18	2.9e-77	69.41	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G779000 PE=4 ...	[more]

BLAST of HG10020060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G35980.1	3.3e-33	39.30	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT5G06320.1	1.4e-31	38.70	NDR1/HIN1-like 3	[more]
AT3G11650.1	6.0e-27	33.89	NDR1/HIN1-like 2	[more]
AT2G35460.1	8.2e-24	33.19	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT1G32270.1	8.2e-16	33.11	syntaxin, putative	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 87..181 e-value: 8.9E-6 score: 26.2
IPR044839	Protein NDR1-like	PANTHER	PTHR31415	OS05G0367900 PROTEIN	coord: 21..212
None	No IPR available	PANTHER	PTHR31415:SF105	LATE EMBRYOGENESIS ABUNDANT PROTEIN	coord: 21..212

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10020060.1	HG10020060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098542	defense response to other organism
cellular_component	GO:0016021	integral component of membrane