HG10019832 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10019832
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
LocationChr04: 25910983 .. 25911165 (-)
RNA-Seq ExpressionHG10019832
SyntenyHG10019832
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGTGTTAGGGATCCGACGAGAAGAAGAGAAAGCCAAGAACAACAAAACAACCAATATCATAACCGGCAAACCGAGAACCGCCAACGGCGGCGGAGGAAGCGGCGGCACCACCAGAGGCAACAGAAGCAAAGAAGCTGTCCACACAAGTAAAACCATCACTGAACTTAGGCTGCAATAA

mRNA sequence

ATGGCAGTGTTAGGGATCCGACGAGAAGAAGAGAAAGCCAAGAACAACAAAACAACCAATATCATAACCGGCAAACCGAGAACCGCCAACGGCGGCGGAGGAAGCGGCGGCACCACCAGAGGCAACAGAAGCAAAGAAGCTGTCCACACAAGTAAAACCATCACTGAACTTAGGCTGCAATAA

Coding sequence (CDS)

ATGGCAGTGTTAGGGATCCGACGAGAAGAAGAGAAAGCCAAGAACAACAAAACAACCAATATCATAACCGGCAAACCGAGAACCGCCAACGGCGGCGGAGGAAGCGGCGGCACCACCAGAGGCAACAGAAGCAAAGAAGCTGTCCACACAAGTAAAACCATCACTGAACTTAGGCTGCAATAA

Protein sequence

MAVLGIRREEEKAKNNKTTNIITGKPRTANGGGGSGGTTRGNRSKEAVHTSKTITELRLQ
Homology
The following BLAST results are available for this feature:
BLAST of HG10019832 vs.
Match NameE-valueIdentityDescription
BLAST of HG10019832 vs.
Match NameE-valueIdentityDescription
BLAST of HG10019832 vs.
Match NameE-valueIdentityDescription
BLAST of HG10019832 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 17..44
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..60
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10019832.1HG10019832.1mRNA