HG10019382 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAGGGGGCGGATGAACGGAAATGGGAATTGTGATTATAGTTATGAGAGCAATGGATATCATTCATTAGATCTAGTGGATGTCTACGGAGACAACACGCCTGATGGAAGAAGCTCTGGGAAGACGTCGCAGGTTGCATCTCCTTCGAATTGCATCGTTCATCCGGTTTCTAAATTAGATACTCTTGCTGGAGTTGCAATCAAGTATGGTGTTGAGGTAAACCACATTTCAGAATTTTGAATGAGTTTATAGTATAAAGAGAAGTTTTGAATTTGCATTAGGCTGTAATGTTCTCATATTTCTTTCAGTCGACTTTATGATGGGAAAACAATGAAATGATGATTTCAAAATGTTTTTGCTTTATATTGTTGTTATATTGGCGTGTCAGATGTTACTTTTTTTCCTCTTTTTATTTTTAATTTTTTTATAATGAATCTATGATTCATACCGACAAAGCTAGAATTACTCTCTTTCCTCTTTGTCCTGGCATGATTTCTAAAGTTCCCAGATCGATGACAACTCATTCAAGTTGAATTTTCTGCAATAACCAAATGAGGCTTACGACAACTTTATATTGAAAATTGAATGAACCAGAACCTTTTTCCTTTACCCCCCTCCTGAGATAATCATTAGACTAGCATGGATTATGTACAGATGTTCATCAGATCTTCTTTCCTGTTTTCCAACTTAATATGACATTTTCGAAGTATGACTATCCAGGTAAGAAGGGGCAGAGCCGGAGTTTAAATTAAGGAAAATATCAATTTATACCTAAAAGTTTGGGATTGTATCACTAAGAATTATATCAATTTATATCATTTGGGTAAAGTTACCTTTGAAAGTGGTCCATTAGAATTGGTCCATGCATCTATTTTAATAGTCCATTTTGTTAATCATACCTTAGAATAAAAGTCTACTCATGTCTACGAATTGATGCGTTGATGATTTTCAAAAGTAATTTTAATAAAATGTCTAAATTGATTCACCGTGATAATTTAAGAGTTTAATTGAAATAATTATATGTTTGACACGAAGCTTGACGGAGGGTCGAGGGTATAAACTAATATGTTTATGAAAGTTTAAGGTTTACATTGATATTAGTTAAGGGTTTTAATTGATACAATTTCCAAAGTCTAGAGTATAAATTGATATTTTCCCCAAAAGTTAACCCGGCCTAAAATCAATAATAATTTTATAGGAAAATCATGATATTTATTGAAAAAAATAGAAATCAAAGGATCAAAGGGTCAAAGTTTTTATTTCTCAGTTATTCTTGTTTAATGAGAGTTAAAGAATACTAATATGGGTTTCCCACCCTCTATACTTGGCTTCTCCACTGAAATAGTAAGAGTTTGCTTGTGGTAATCATATAGTAGAAAATTTCACTCCAAAATCTGAAAATTTCTTTCATCTACCATCGATACTATTTTGTGATATTATTTGTTATTGGGTTATTTTAATGAAAATTCGATTTCTTTTCAAACAAAAAGATTGTGATGTGGTCATAAATTATCACTGTCTTCAAGTATAATTTTTTGCAATAAAATGAGTCTCTTATAGGTGGAAACTGTAATAATTGTTTATGGTGATTCGCCAGGTCGCAGATATAAAGAAGATGAATGGGCTAGTTACAGACTTTCAAATGTTTGCTCTTAAATCTCTTCAGATTCCTCTTCCTGGAAGGCATCCTCCATCTCCTTGTCTATTAGAATGTCTAAACACTCCAGGGTATGTGTTTGCTATTTTGATATCTTTCATACTGTTTTCACATATTATTGCATAAGAGTGATTTGAATTGACTCGTTGAGCTGTGTTCAACGCCGTGTTTGAGTTTGGTATTGACTTGCAGAATAGTTATTGGCCATATAGGGCTTGAGGTTAAGGTTGGGGTTCAAATAGTATTTCTATCTGGAAAACTGTGCTTGGAGTGGCCTAAGGGAAGCCATGAAGAAAGTAAATAACATACCAGTGGAGCCAGGGCCATTATTTTATGCTTGGCGCCTTAGGTCTTTAATGGTTCTTTTTCTGATAGAGGTCATAAGTTGGAATAGTGTATACTGAATAGTTCTTTTGCTGTAGGAATTGTTGGTGATCGTTGAACAGTGGCACTGATTGTGATTTGTGAGTGTGGATGCTCAGGTGGTTGGTTTATTATGCAAAATTTAATGTTAACTAACTACATGTTGAACATATAAAGAAATTTAAAAGGTTACAATTGTTATGAATAATCTACCTGGAGTCTCATTCATGGCACATCCATCATAAATATAATACCACCAAGAACCTATCTATCTTGCTTGAAACCCATACAGATGTTAGTGTTTAAAAATAGTTCACCATTGTTGATTTAATTCGCAAAAAATTTGCTTATAATTCTTTATTCCCAAGTGTGTAAACTTCCACATTGAAATTCATCCCAAGTGATGTATTTAATACACTATGTTCGTTACAATACAATAAGAAATGGATGATTATAAATTTTTCACCCAGTATGTTGTGTTGATAAGAGGATCCTTTTGCAGACAGAGCAGCTCCGAAAAGACTCCAAGTCAACGTCTTTCGTCGGAATTCTTTGAATCTTTCCAGTCCCTCAAATTGAAGTCTTCCGATCAAAAGGTGTCCCCAGCCATGAGCTCTTTACAAGGTTACTATGGGCTCAAACCATCTGATCAGAACAGCAGAATTGACGGTTTTGACATGGCAGTGTACAGAAAAGGAGCCTCCCATTATTTAGAAGACGCGCACGTTTCTGGGACCCCACAGCATTCGGATTTACTAACACATCACCATCGAAAATCCAAGAGTTTAGTGAATGGATTTTTGGGTGAGAAAGGAGAGGTGGGTGATCTGCAATCTGCTGAAGCCGGGGATGGAGATCCCAAATGGAGCGATAAATTGATCAGAAGGCGCCAGAAATCAGTAGCTGACTTTTCGCATTCGCCTGAAACGCTTTTGAAAGATGACAACAGCAATGGTGGTAGTAACGGCTTCTCATCCTCTGCTGGAAAAGGCTTATTGGCTCAAAGACCCAAAACTTCTAGTAGAGCGAATTTGGTAAGTGACAATGAAGTCGGATTGATTCCAATTCCGATTGGTCTGGGGGATTCGTTCGTGGCTGCTGATGGATTTGCTGCGTTCAGGAAGTCATCGAGTACATCGAGTTTGCCAGATCAAGAAAATGGCATCACTTCATCAATCTGGTCTCAGGCAATTTCAACTGCTTCGAGACCAATATTTGATGGGTTGCCAAAACCTTTAACAGGTCGAAGAAACAAAGCTGCACTTGATTAG ATGGAAAGGGGGCGGATGAACGGAAATGGGAATTGTGATTATAGTTATGAGAGCAATGGATATCATTCATTAGATCTAGTGGATGTCTACGGAGACAACACGCCTGATGGAAGAAGCTCTGGGAAGACGTCGCAGGTTGCATCTCCTTCGAATTGCATCGTTCATCCGGTTTCTAAATTAGATACTCTTGCTGGAGTTGCAATCAAGTATGGTGTTGAGGTCGCAGATATAAAGAAGATGAATGGGCTAGTTACAGACTTTCAAATGTTTGCTCTTAAATCTCTTCAGATTCCTCTTCCTGGAAGGCATCCTCCATCTCCTTGTCTATTAGAATGTCTAAACACTCCAGGTAACGGCTTCTCATCCTCTGCTGGAAAAGGCTTATTGGCTCAAAGACCCAAAACTTCTAGTAGAGCGAATTTGGTAAGTGACAATGAAGTCGGATTGATTCCAATTCCGATTGGTCTGGGGGATTCGTTCGTGGCTGCTGATGGATTTGCTGCGTTCAGGAAGTCATCGAGTACATCGAGTTTGCCAGATCAAGAAAATGGCATCACTTCATCAATCTGGTCTCAGGCAATTTCAACTGCTTCGAGACCAATATTTGATGGGTTGCCAAAACCTTTAACAGGTCGAAGAAACAAAGCTGCACTTGATTAG ATGGAAAGGGGGCGGATGAACGGAAATGGGAATTGTGATTATAGTTATGAGAGCAATGGATATCATTCATTAGATCTAGTGGATGTCTACGGAGACAACACGCCTGATGGAAGAAGCTCTGGGAAGACGTCGCAGGTTGCATCTCCTTCGAATTGCATCGTTCATCCGGTTTCTAAATTAGATACTCTTGCTGGAGTTGCAATCAAGTATGGTGTTGAGGTCGCAGATATAAAGAAGATGAATGGGCTAGTTACAGACTTTCAAATGTTTGCTCTTAAATCTCTTCAGATTCCTCTTCCTGGAAGGCATCCTCCATCTCCTTGTCTATTAGAATGTCTAAACACTCCAGGTAACGGCTTCTCATCCTCTGCTGGAAAAGGCTTATTGGCTCAAAGACCCAAAACTTCTAGTAGAGCGAATTTGGTAAGTGACAATGAAGTCGGATTGATTCCAATTCCGATTGGTCTGGGGGATTCGTTCGTGGCTGCTGATGGATTTGCTGCGTTCAGGAAGTCATCGAGTACATCGAGTTTGCCAGATCAAGAAAATGGCATCACTTCATCAATCTGGTCTCAGGCAATTTCAACTGCTTCGAGACCAATATTTGATGGGTTGCCAAAACCTTTAACAGGTCGAAGAAACAAAGCTGCACTTGATTAG MERGRMNGNGNCDYSYESNGYHSLDLVDVYGDNTPDGRSSGKTSQVASPSNCIVHPVSKLDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPLPGRHPPSPCLLECLNTPGNGFSSSAGKGLLAQRPKTSSRANLVSDNEVGLIPIPIGLGDSFVAADGFAAFRKSSSTSSLPDQENGITSSIWSQAISTASRPIFDGLPKPLTGRRNKAALD Homology
BLAST of HG10019382 vs. NCBI nr
Match: XP_038906142.1 (uncharacterized protein LOC120092022 [Benincasa hispida]) HSP 1 Score: 354.0 bits (907), Expect = 9.4e-94 Identity = 211/372 (56.72%), Postives = 212/372 (56.99%), Query Frame = 0
BLAST of HG10019382 vs. NCBI nr
Match: XP_004148571.1 (uncharacterized protein LOC101221951 [Cucumis sativus] >KGN58512.1 hypothetical protein Csa_002318 [Cucumis sativus]) HSP 1 Score: 349.4 bits (895), Expect = 2.3e-92 Identity = 207/373 (55.50%), Postives = 212/373 (56.84%), Query Frame = 0
BLAST of HG10019382 vs. NCBI nr
Match: XP_008461847.1 (PREDICTED: uncharacterized protein LOC103500354 [Cucumis melo] >KAA0052766.1 Peptidoglycan-binding LysM domain-containing protein, putative isoform 1 [Cucumis melo var. makuwa] >TYK04190.1 Peptidoglycan-binding LysM domain-containing protein, putative isoform 1 [Cucumis melo var. makuwa]) HSP 1 Score: 345.5 bits (885), Expect = 3.3e-91 Identity = 207/372 (55.65%), Postives = 210/372 (56.45%), Query Frame = 0
BLAST of HG10019382 vs. NCBI nr
Match: XP_023528753.1 (uncharacterized protein LOC111791593 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 311.6 bits (797), Expect = 5.3e-81 Identity = 199/380 (52.37%), Postives = 204/380 (53.68%), Query Frame = 0
BLAST of HG10019382 vs. NCBI nr
Match: XP_023524813.1 (uncharacterized protein LOC111788632 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 311.6 bits (797), Expect = 5.3e-81 Identity = 193/383 (50.39%), Postives = 206/383 (53.79%), Query Frame = 0
BLAST of HG10019382 vs. ExPASy Swiss-Prot
Match: Q3B7I8 (LysM and putative peptidoglycan-binding domain-containing protein 2 OS=Xenopus tropicalis OX=8364 GN=lysmd2 PE=2 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 2.2e-05 Identity = 29/64 (45.31%), Postives = 39/64 (60.94%), Query Frame = 0
BLAST of HG10019382 vs. ExPASy Swiss-Prot
Match: Q3KPL3 (LysM and putative peptidoglycan-binding domain-containing protein 2 OS=Xenopus laevis OX=8355 GN=lysmd2 PE=2 SV=2) HSP 1 Score: 50.1 bits (118), Expect = 3.8e-05 Identity = 29/64 (45.31%), Postives = 38/64 (59.38%), Query Frame = 0
BLAST of HG10019382 vs. ExPASy Swiss-Prot
Match: Q99LE3 (LysM and putative peptidoglycan-binding domain-containing protein 3 OS=Mus musculus OX=10090 GN=Lysmd3 PE=2 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 8.5e-05 Identity = 32/81 (39.51%), Postives = 43/81 (53.09%), Query Frame = 0
BLAST of HG10019382 vs. ExPASy Swiss-Prot
Match: Q1JQA8 (LysM and putative peptidoglycan-binding domain-containing protein 2 OS=Bos taurus OX=9913 GN=LYSMD2 PE=2 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 1.4e-04 Identity = 31/87 (35.63%), Postives = 45/87 (51.72%), Query Frame = 0
BLAST of HG10019382 vs. ExPASy Swiss-Prot
Match: Q8IV50 (LysM and putative peptidoglycan-binding domain-containing protein 2 OS=Homo sapiens OX=9606 GN=LYSMD2 PE=1 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 1.4e-04 Identity = 31/87 (35.63%), Postives = 45/87 (51.72%), Query Frame = 0
BLAST of HG10019382 vs. ExPASy TrEMBL
Match: A0A0A0LCX1 (LysM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G653440 PE=4 SV=1) HSP 1 Score: 349.4 bits (895), Expect = 1.1e-92 Identity = 207/373 (55.50%), Postives = 212/373 (56.84%), Query Frame = 0
BLAST of HG10019382 vs. ExPASy TrEMBL
Match: A0A5D3BYK1 (Peptidoglycan-binding LysM domain-containing protein, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1856G00160 PE=4 SV=1) HSP 1 Score: 345.5 bits (885), Expect = 1.6e-91 Identity = 207/372 (55.65%), Postives = 210/372 (56.45%), Query Frame = 0
BLAST of HG10019382 vs. ExPASy TrEMBL
Match: A0A1S3CG46 (uncharacterized protein LOC103500354 OS=Cucumis melo OX=3656 GN=LOC103500354 PE=4 SV=1) HSP 1 Score: 345.5 bits (885), Expect = 1.6e-91 Identity = 207/372 (55.65%), Postives = 210/372 (56.45%), Query Frame = 0
BLAST of HG10019382 vs. ExPASy TrEMBL
Match: A0A6J1J3A0 (uncharacterized protein LOC111481449 OS=Cucurbita maxima OX=3661 GN=LOC111481449 PE=4 SV=1) HSP 1 Score: 310.8 bits (795), Expect = 4.4e-81 Identity = 199/381 (52.23%), Postives = 204/381 (53.54%), Query Frame = 0
BLAST of HG10019382 vs. ExPASy TrEMBL
Match: A0A6J1DGQ0 (uncharacterized protein LOC111020702 OS=Momordica charantia OX=3673 GN=LOC111020702 PE=4 SV=1) HSP 1 Score: 307.8 bits (787), Expect = 3.7e-80 Identity = 194/382 (50.79%), Postives = 202/382 (52.88%), Query Frame = 0
BLAST of HG10019382 vs. TAIR 10
Match: AT5G08200.1 (peptidoglycan-binding LysM domain-containing protein ) HSP 1 Score: 105.1 bits (261), Expect = 7.1e-23 Identity = 70/162 (43.21%), Postives = 89/162 (54.94%), Query Frame = 0
HSP 2 Score: 77.0 bits (188), Expect = 2.1e-14 Identity = 60/131 (45.80%), Postives = 75/131 (57.25%), Query Frame = 0
BLAST of HG10019382 vs. TAIR 10
Match: AT5G23130.1 (Peptidoglycan-binding LysM domain-containing protein ) HSP 1 Score: 104.4 bits (259), Expect = 1.2e-22 Identity = 68/138 (49.28%), Postives = 84/138 (60.87%), Query Frame = 0
HSP 2 Score: 68.9 bits (167), Expect = 5.6e-12 Identity = 56/126 (44.44%), Postives = 68/126 (53.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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