HG10018311 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10018311
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	stress-induced protein KIN2-like
Location	Chr04: 2953478 .. 2953681 (-)
RNA-Seq Expression	HG10018311
Synteny	HG10018311

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAATAACTCTCAGAACATGAGCTATCATGCTGGAGAAGCCAAGGGCCAAACTGAAGAAAAAACAAGCAATCTGATGGAGAAGGCAAGTCATGTAGCTCAATCGGCAAAAGAGACCGTACAAGAGGCAGGCCAACAAATGATGGTCAAAGCTCAAGAAGCAACTGAAGCTATCAAGGATGCGACTGGTTTTAACAAATGA

mRNA sequence

ATGGCAAATAACTCTCAGAACATGAGCTATCATGCTGGAGAAGCCAAGGGCCAAACTGAAGAAAAAACAAGCAATCTGATGGAGAAGGCAAGTCATGTAGCTCAATCGGCAAAAGAGACCGTACAAGAGGCAGGCCAACAAATGATGGTCAAAGCTCAAGAAGCAACTGAAGCTATCAAGGATGCGACTGGTTTTAACAAATGA

Coding sequence (CDS)

ATGGCAAATAACTCTCAGAACATGAGCTATCATGCTGGAGAAGCCAAGGGCCAAACTGAAGAAAAAACAAGCAATCTGATGGAGAAGGCAAGTCATGTAGCTCAATCGGCAAAAGAGACCGTACAAGAGGCAGGCCAACAAATGATGGTCAAAGCTCAAGAAGCAACTGAAGCTATCAAGGATGCGACTGGTTTTAACAAATGA

Protein sequence

MANNSQNMSYHAGEAKGQTEEKTSNLMEKASHVAQSAKETVQEAGQQMMVKAQEATEAIKDATGFNK

Homology

[Close]

BLAST of HG10018311 vs. NCBI nr
Match: XP_022134444.1 (stress-induced protein KIN2-like isoform X3 [Momordica charantia] >XP_022134445.1 stress-induced protein KIN2-like isoform X3 [Momordica charantia])

HSP 1 Score: 99.0 bits (245), Expect = 1.7e-17
Identity = 54/67 (80.60%), Postives = 59/67 (88.06%), Query Frame = 0


Query: 1  MANNSQNMSYHAGEAKGQTEEKTSNLMEKASHVAQSAKETVQEAGQQMMVKAQEATEAIK 60
          MA++SQ MSYHAGEAKGQ EEK SNLM+KAS+ AQSAKET+QEAGQQMM KAQ A EAIK
Sbjct: 1  MADSSQKMSYHAGEAKGQAEEKASNLMDKASNAAQSAKETMQEAGQQMMAKAQGAVEAIK 60

Query: 61 DATGFNK 68
          DATG NK
Sbjct: 61 DATGLNK 67

[Close]

BLAST of HG10018311 vs. NCBI nr
Match: XP_038891164.1 (uncharacterized protein LOC120080541 [Benincasa hispida])

HSP 1 Score: 96.7 bits (239), Expect = 8.3e-17
Identity = 52/67 (77.61%), Postives = 57/67 (85.07%), Query Frame = 0


Query: 1  MANNSQNMSYHAGEAKGQTEEKTSNLMEKASHVAQSAKETVQEAGQQMMVKAQEATEAIK 60
          MA++SQ MSYH GEAKGQ EEK +NLMEKAS+ AQS KET+QEAGQQMM KAQ A EAIK
Sbjct: 1  MADSSQKMSYHVGEAKGQAEEKATNLMEKASNAAQSTKETIQEAGQQMMAKAQGAAEAIK 60

Query: 61 DATGFNK 68
          DATG NK
Sbjct: 61 DATGLNK 67

[Close]

BLAST of HG10018311 vs. NCBI nr
Match: XP_022134443.1 (stress-induced protein KIN2-like isoform X2 [Momordica charantia])

HSP 1 Score: 95.5 bits (236), Expect = 1.8e-16
Identity = 52/64 (81.25%), Postives = 56/64 (87.50%), Query Frame = 0


Query: 4  NSQNMSYHAGEAKGQTEEKTSNLMEKASHVAQSAKETVQEAGQQMMVKAQEATEAIKDAT 63
          +SQ MSYHAGEAKGQ EEK SNLM+KAS+ AQSAKET+QEAGQQMM KAQ A EAIKDAT
Sbjct: 12 SSQKMSYHAGEAKGQAEEKASNLMDKASNAAQSAKETMQEAGQQMMAKAQGAVEAIKDAT 71

Query: 64 GFNK 68
          G NK
Sbjct: 72 GLNK 75

[Close]

BLAST of HG10018311 vs. NCBI nr
Match: XP_008459448.1 (PREDICTED: stress-induced protein KIN2-like [Cucumis melo] >KAA0039403.1 stress-induced protein KIN2-like [Cucumis melo var. makuwa] >TYK00591.1 stress-induced protein KIN2-like [Cucumis melo var. makuwa])

HSP 1 Score: 95.5 bits (236), Expect = 1.8e-16
Identity = 52/67 (77.61%), Postives = 58/67 (86.57%), Query Frame = 0


Query: 1  MANNSQNMSYHAGEAKGQTEEKTSNLMEKASHVAQSAKETVQEAGQQMMVKAQEATEAIK 60
          MA++SQ MSY AGEAKGQ EEK SNLM+KAS+ AQSAKET+QEAGQQMM KAQ A +AIK
Sbjct: 1  MADSSQKMSYQAGEAKGQAEEKASNLMDKASNAAQSAKETIQEAGQQMMAKAQGAADAIK 60

Query: 61 DATGFNK 68
          DATG NK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of HG10018311 vs. NCBI nr
Match: XP_022134441.1 (stress-induced protein KIN2-like isoform X1 [Momordica charantia] >XP_022134442.1 stress-induced protein KIN2-like isoform X1 [Momordica charantia])

HSP 1 Score: 95.5 bits (236), Expect = 1.8e-16
Identity = 52/64 (81.25%), Postives = 56/64 (87.50%), Query Frame = 0


Query: 4   NSQNMSYHAGEAKGQTEEKTSNLMEKASHVAQSAKETVQEAGQQMMVKAQEATEAIKDAT 63
           +SQ MSYHAGEAKGQ EEK SNLM+KAS+ AQSAKET+QEAGQQMM KAQ A EAIKDAT
Sbjct: 57  SSQKMSYHAGEAKGQAEEKASNLMDKASNAAQSAKETMQEAGQQMMAKAQGAVEAIKDAT 116

Query: 64  GFNK 68
           G NK
Sbjct: 117 GLNK 120

[Close]

BLAST of HG10018311 vs. ExPASy Swiss-Prot
Match: O49817 (Late embryogenesis abundant protein 2 OS=Cicer arietinum OX=3827 PE=2 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 4.9e-04
Identity = 26/59 (44.07%), Postives = 36/59 (61.02%), Query Frame = 0


Query: 5  SQNMSYHAGEAKGQTEEKTSNLMEKASHVAQSAKETVQEAGQQMMVKAQEATEAIKDAT 64
          S + SY AGEAKG+TEEKT+ ++      AQ+AKE  Q+A Q    K  +  +A K+ T
Sbjct: 3  SHDQSYRAGEAKGRTEEKTNQMIGNIEDKAQAAKEKAQQAAQTAKDKTSQTAQAAKEKT 61

[Close]

BLAST of HG10018311 vs. ExPASy TrEMBL
Match: A0A6J1BYR6 (stress-induced protein KIN2-like isoform X3 OS=Momordica charantia OX=3673 GN=LOC111006689 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 8.1e-18
Identity = 54/67 (80.60%), Postives = 59/67 (88.06%), Query Frame = 0


Query: 1  MANNSQNMSYHAGEAKGQTEEKTSNLMEKASHVAQSAKETVQEAGQQMMVKAQEATEAIK 60
          MA++SQ MSYHAGEAKGQ EEK SNLM+KAS+ AQSAKET+QEAGQQMM KAQ A EAIK
Sbjct: 1  MADSSQKMSYHAGEAKGQAEEKASNLMDKASNAAQSAKETMQEAGQQMMAKAQGAVEAIK 60

Query: 61 DATGFNK 68
          DATG NK
Sbjct: 61 DATGLNK 67

[Close]

BLAST of HG10018311 vs. ExPASy TrEMBL
Match: A0A6J1BXT6 (stress-induced protein KIN2-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006689 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 8.9e-17
Identity = 52/64 (81.25%), Postives = 56/64 (87.50%), Query Frame = 0


Query: 4   NSQNMSYHAGEAKGQTEEKTSNLMEKASHVAQSAKETVQEAGQQMMVKAQEATEAIKDAT 63
           +SQ MSYHAGEAKGQ EEK SNLM+KAS+ AQSAKET+QEAGQQMM KAQ A EAIKDAT
Sbjct: 57  SSQKMSYHAGEAKGQAEEKASNLMDKASNAAQSAKETMQEAGQQMMAKAQGAVEAIKDAT 116

Query: 64  GFNK 68
           G NK
Sbjct: 117 GLNK 120

[Close]

BLAST of HG10018311 vs. ExPASy TrEMBL
Match: A0A5A7T8W6 (Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002080 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 8.9e-17
Identity = 52/67 (77.61%), Postives = 58/67 (86.57%), Query Frame = 0


Query: 1  MANNSQNMSYHAGEAKGQTEEKTSNLMEKASHVAQSAKETVQEAGQQMMVKAQEATEAIK 60
          MA++SQ MSY AGEAKGQ EEK SNLM+KAS+ AQSAKET+QEAGQQMM KAQ A +AIK
Sbjct: 1  MADSSQKMSYQAGEAKGQAEEKASNLMDKASNAAQSAKETIQEAGQQMMAKAQGAADAIK 60

Query: 61 DATGFNK 68
          DATG NK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of HG10018311 vs. ExPASy TrEMBL
Match: A0A6J1C204 (stress-induced protein KIN2-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111006689 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 8.9e-17
Identity = 52/64 (81.25%), Postives = 56/64 (87.50%), Query Frame = 0


Query: 4  NSQNMSYHAGEAKGQTEEKTSNLMEKASHVAQSAKETVQEAGQQMMVKAQEATEAIKDAT 63
          +SQ MSYHAGEAKGQ EEK SNLM+KAS+ AQSAKET+QEAGQQMM KAQ A EAIKDAT
Sbjct: 12 SSQKMSYHAGEAKGQAEEKASNLMDKASNAAQSAKETMQEAGQQMMAKAQGAVEAIKDAT 71

Query: 64 GFNK 68
          G NK
Sbjct: 72 GLNK 75

[Close]

BLAST of HG10018311 vs. ExPASy TrEMBL
Match: A0A1S3CAA8 (stress-induced protein KIN2-like OS=Cucumis melo OX=3656 GN=LOC103498579 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 8.9e-17
Identity = 52/67 (77.61%), Postives = 58/67 (86.57%), Query Frame = 0


Query: 1  MANNSQNMSYHAGEAKGQTEEKTSNLMEKASHVAQSAKETVQEAGQQMMVKAQEATEAIK 60
          MA++SQ MSY AGEAKGQ EEK SNLM+KAS+ AQSAKET+QEAGQQMM KAQ A +AIK
Sbjct: 1  MADSSQKMSYQAGEAKGQAEEKASNLMDKASNAAQSAKETIQEAGQQMMAKAQGAADAIK 60

Query: 61 DATGFNK 68
          DATG NK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of HG10018311 vs. TAIR 10
Match: AT5G53820.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 82.8 bits (203), Expect = 1.1e-16
Identity = 43/67 (64.18%), Postives = 58/67 (86.57%), Query Frame = 0


Query: 1  MANNSQNMSYHAGEAKGQTEEKTSNLMEKASHVAQSAKETVQEAGQQMMVKAQEATEAIK 60
          M+NNSQ+MS++AG+AKGQT+EK SNL++KAS+ AQSAKE++QE GQQ+  KAQ A+E IK
Sbjct: 1  MSNNSQSMSFNAGQAKGQTQEKASNLIDKASNAAQSAKESIQEGGQQLKQKAQGASETIK 60

Query: 61 DATGFNK 68
          + TG +K
Sbjct: 61 EKTGISK 67

[Close]

BLAST of HG10018311 vs. TAIR 10
Match: AT5G38760.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 81.6 bits (200), Expect = 2.6e-16
Identity = 42/67 (62.69%), Postives = 58/67 (86.57%), Query Frame = 0


Query: 1  MANNSQNMSYHAGEAKGQTEEKTSNLMEKASHVAQSAKETVQEAGQQMMVKAQEATEAIK 60
          M++NSQN+S+ AG+AKGQT+EK S +M+KAS+ AQSAKE+++E GQQ+  KAQ ATE++K
Sbjct: 1  MSSNSQNISFQAGQAKGQTQEKASTMMDKASNAAQSAKESLKETGQQIKEKAQGATESVK 60

Query: 61 DATGFNK 68
          +ATG NK
Sbjct: 61 NATGMNK 67

[Close]

BLAST of HG10018311 vs. TAIR 10
Match: AT3G02480.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 65.5 bits (158), Expect = 1.9e-11
Identity = 34/65 (52.31%), Postives = 46/65 (70.77%), Query Frame = 0


Query: 3  NNSQNMSYHAGEAKGQTEEKTSNLMEKASHVAQSAKETVQEAGQQMMVKAQEATEAIKDA 62
          +N QN SY AG+A GQT+EK   +M+KA   A SA++++Q+ GQQM  KAQ A + +KD 
Sbjct: 2  DNKQNASYQAGQATGQTKEKAGGMMDKAKDAAASAQDSLQQTGQQMKEKAQGAADVVKDK 61

Query: 63 TGFNK 68
          TG NK
Sbjct: 62 TGMNK 66

The following BLAST results are available for this feature:

BLAST of HG10018311 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134444.1	1.7e-17	80.60	stress-induced protein KIN2-like isoform X3 [Momordica charantia] >XP_022134445....	[more]
XP_038891164.1	8.3e-17	77.61	uncharacterized protein LOC120080541 [Benincasa hispida]	[more]
XP_022134443.1	1.8e-16	81.25	stress-induced protein KIN2-like isoform X2 [Momordica charantia]	[more]
XP_008459448.1	1.8e-16	77.61	PREDICTED: stress-induced protein KIN2-like [Cucumis melo] >KAA0039403.1 stress-...	[more]
XP_022134441.1	1.8e-16	81.25	stress-induced protein KIN2-like isoform X1 [Momordica charantia] >XP_022134442....	[more]

BLAST of HG10018311 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O49817	4.9e-04	44.07	Late embryogenesis abundant protein 2 OS=Cicer arietinum OX=3827 PE=2 SV=1	[more]

BLAST of HG10018311 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BYR6	8.1e-18	80.60	stress-induced protein KIN2-like isoform X3 OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1BXT6	8.9e-17	81.25	stress-induced protein KIN2-like isoform X1 OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A5A7T8W6	8.9e-17	77.61	Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A6J1C204	8.9e-17	81.25	stress-induced protein KIN2-like isoform X2 OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A1S3CAA8	8.9e-17	77.61	stress-induced protein KIN2-like OS=Cucumis melo OX=3656 GN=LOC103498579 PE=4 SV...	[more]

BLAST of HG10018311 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53820.1	1.1e-16	64.18	Late embryogenesis abundant protein (LEA) family protein	[more]
AT5G38760.1	2.6e-16	62.69	Late embryogenesis abundant protein (LEA) family protein	[more]
AT3G02480.1	1.9e-11	52.31	Late embryogenesis abundant protein (LEA) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..49
None	No IPR available	PANTHER	PTHR34191:SF23	STRESS-INDUCED PROTEIN KIN1-RELATED	coord: 1..67
IPR039624	Stress-induced protein KIN1/KIN2	PANTHER	PTHR34191	LATE EMBRYOGENESIS ABUNDANT PROTEIN (LEA) FAMILY PROTEIN	coord: 1..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10018311.1	HG10018311.1	mRNA