HG10018141 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10018141
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	histidine-containing phosphotransfer protein 5-like
Location	Chr04: 820675 .. 821488 (-)
RNA-Seq Expression	HG10018141
Synteny	HG10018141

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGCGTCGGCGTCTTCCTCTTCCTCTCGTCCACAGTCGGAATATCCTCAGATAATCATGGTCCAGAAATTCATTGACGCTTTAAGCGAACAGGTGAATCATCTTTTTCAATCCAAACTCTGTTTTCCATCTCTCTTTATTCCGATTCGTTTTTCTTTCCACGTTCTTGAGTTCCGATGGCTTAAATTTCTTGCAGGGATTTCTTGACGAGAACTTTAGTAACTTGAGAACTCTCCCTGAGAATCAAAACTCCTTGGTTATATTCTGCAGTGACGCCGAACCTAAGCTCGAAACTATTGAGAAAGCTCTGTAATGATTCAAATCCCTAAACTAATCCTTGTTTGTGTTATTAAGTTCTTCTGAATCATTTTTCTGGTTATTTTAGGGCAGATGAGCCTCTGGATTTTCGTACTGTGATAAACACCGTGGAAATGATCAGATCTGGTGCTGTTAGGTAAAGGCGGATCAATTCAATTTGAAATTCTTGTTTAATTTCTGGTTTTGAAAAGTGAATTTGGGGATAATTTAAAAAGATTTTGTGTATAATTATGAACTTAACAGAGTTGGTGGAACTCGATTAGCAGGGGCTTGTACTGTCTTACTACAACATTGCAATGACAGTAACATTCAGCGGTAATTAAAAAAAAATAAAAGTGTTAATTAATTGTTTAAACAATATGAAAGGATTATTATTAATTATTATTGTCACTTGTACTTTGCCAGTTCAAAAGATGCTTACAAGAAGCTCAATTGGGAATACTATGTTTTACGTGATTGTTTCCACCATATTCTTCAGGTAAGGTTCTTTTAA

mRNA sequence

ATGTCGGCGTCGGCGTCTTCCTCTTCCTCTCGTCCACAGTCGGAATATCCTCAGATAATCATGGTCCAGAAATTCATTGACGCTTTAAGCGAACAGGGATTTCTTGACGAGAACTTTAGTAACTTGAGAACTCTCCCTGAGAATCAAAACTCCTTGGTTATATTCTGCAGTGACGCCGAACCTAAGCTCGAAACTATTGAGAAAGCTCTGGCAGATGAGCCTCTGGATTTTCGTACTGTGATAAACACCGTGGAAATGATCAGATCTGGTGCTGTTAGAGTTGGTGGAACTCGATTAGCAGGGGCTTGTACTGTCTTACTACAACATTGCAATGACAGTAACATTCAGCGTTCAAAAGATGCTTACAAGAAGCTCAATTGGGAATACTATGTTTTACGTGATTGTTTCCACCATATTCTTCAGGTAAGGTTCTTTTAA

Coding sequence (CDS)

ATGTCGGCGTCGGCGTCTTCCTCTTCCTCTCGTCCACAGTCGGAATATCCTCAGATAATCATGGTCCAGAAATTCATTGACGCTTTAAGCGAACAGGGATTTCTTGACGAGAACTTTAGTAACTTGAGAACTCTCCCTGAGAATCAAAACTCCTTGGTTATATTCTGCAGTGACGCCGAACCTAAGCTCGAAACTATTGAGAAAGCTCTGGCAGATGAGCCTCTGGATTTTCGTACTGTGATAAACACCGTGGAAATGATCAGATCTGGTGCTGTTAGAGTTGGTGGAACTCGATTAGCAGGGGCTTGTACTGTCTTACTACAACATTGCAATGACAGTAACATTCAGCGTTCAAAAGATGCTTACAAGAAGCTCAATTGGGAATACTATGTTTTACGTGATTGTTTCCACCATATTCTTCAGGTAAGGTTCTTTTAA

Protein sequence

MSASASSSSSRPQSEYPQIIMVQKFIDALSEQGFLDENFSNLRTLPENQNSLVIFCSDAEPKLETIEKALADEPLDFRTVINTVEMIRSGAVRVGGTRLAGACTVLLQHCNDSNIQRSKDAYKKLNWEYYVLRDCFHHILQVRFF

Homology

[Close]

BLAST of HG10018141 vs. NCBI nr
Match: XP_038895515.1 (histidine-containing phosphotransfer protein 1-like [Benincasa hispida])

HSP 1 Score: 207.2 bits (526), Expect = 9.4e-50
Identity = 105/143 (73.43%), Postives = 119/143 (83.22%), Query Frame = 0


Query: 1   MSASASSSSSRPQSE--YPQIIMVQKFIDALSEQGFLDENFSNLRTLPENQNSLVIFCSD 60
           MSASASSSSSRP +   +P   M++KFIDAL EQGFLDE+F+  R LPENQ+SL  FC +
Sbjct: 1   MSASASSSSSRPPAGMLHPHRFMIEKFIDALREQGFLDEDFNKRRNLPENQDSLARFCGE 60

Query: 61  AEPKLETIEKALADEPLDFRTVINTVEMIRSGAVRVGGTRLAGACTVLLQHCNDSNIQRS 120
           AEPKLETIEKALA E +DFR+VINTVEMIRSGA RVGGTR+A ACT L QHCN +NI+ S
Sbjct: 61  AEPKLETIEKALASENVDFRSVINTVEMIRSGAARVGGTRVASACTDLQQHCNSNNIEGS 120

Query: 121 KDAYKKLNWEYYVLRDCFHHILQ 142
             AYKKL+WEYYVLRDCFHHILQ
Sbjct: 121 NAAYKKLSWEYYVLRDCFHHILQ 143

[Close]

BLAST of HG10018141 vs. NCBI nr
Match: XP_008461693.1 (PREDICTED: histidine-containing phosphotransfer protein 5-like [Cucumis melo] >KAA0040904.1 histidine-containing phosphotransfer protein 5-like [Cucumis melo var. makuwa] >TYK10633.1 histidine-containing phosphotransfer protein 5-like [Cucumis melo var. makuwa])

HSP 1 Score: 178.3 bits (451), Expect = 4.7e-41
Identity = 89/141 (63.12%), Postives = 109/141 (77.30%), Query Frame = 0


Query: 1   MSASASSSSSRPQSEYPQIIMVQKFIDALSEQGFLDENFSNLRTLPENQNSLVIFCSDAE 60
           MSA+ASSSSS PQ    Q  M+ KFIDAL +QGFLD +F+N RT P + +SLV FC ++E
Sbjct: 1   MSAAASSSSSHPQPPRSQQQMIHKFIDALRQQGFLDNDFNNRRTAPGHLDSLVTFCVESE 60

Query: 61  PKLETIEKALADEPLDFRTVINTVEMIRSGAVRVGGTRLAGACTVLLQHCNDSNIQRSKD 120
           PKLE I+KAL  E +DFRT INT EMIRS A RVGG+R+A AC  L +H N++N+  SK+
Sbjct: 61  PKLEIIQKALEGEHVDFRTAINTSEMIRSAATRVGGSRVASACIALQEHLNNNNLNGSKE 120

Query: 121 AYKKLNWEYYVLRDCFHHILQ 142
           AYKKL+WEYYV+RD FHHILQ
Sbjct: 121 AYKKLSWEYYVIRDSFHHILQ 141

[Close]

BLAST of HG10018141 vs. NCBI nr
Match: XP_031736154.1 (histidine-containing phosphotransfer protein 1-like [Cucumis sativus] >KGN64909.1 hypothetical protein Csa_022883 [Cucumis sativus])

HSP 1 Score: 173.7 bits (439), Expect = 1.2e-39
Identity = 86/141 (60.99%), Postives = 109/141 (77.30%), Query Frame = 0


Query: 1   MSASASSSSSRPQSEYPQIIMVQKFIDALSEQGFLDENFSNLRTLPENQNSLVIFCSDAE 60
           MSA+ASSSSS  Q    Q  M+ KFIDAL +QGFLD++F+N RT P + +SLV FC ++E
Sbjct: 1   MSAAASSSSSHSQPPRSQQQMIHKFIDALRQQGFLDDDFNNRRTAPGHLDSLVTFCVESE 60

Query: 61  PKLETIEKALADEPLDFRTVINTVEMIRSGAVRVGGTRLAGACTVLLQHCNDSNIQRSKD 120
           PKLE I+K+L  E LDFRT I+T EMIRS A RVGG+R+A AC  L +H N++N+  SK+
Sbjct: 61  PKLEIIQKSLEGEHLDFRTAISTAEMIRSAAARVGGSRVASACIALQEHLNNNNLNGSKE 120

Query: 121 AYKKLNWEYYVLRDCFHHILQ 142
           AYKKL+WEYYV+RD FHH+LQ
Sbjct: 121 AYKKLSWEYYVIRDSFHHMLQ 141

[Close]

BLAST of HG10018141 vs. NCBI nr
Match: XP_022938022.1 (uncharacterized protein LOC111444235 [Cucurbita moschata] >KAG6585983.1 Histidine-containing phosphotransfer protein 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020780.1 Histidine-containing phosphotransfer protein 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 159.8 bits (403), Expect = 1.7e-35
Identity = 70/129 (54.26%), Postives = 99/129 (76.74%), Query Frame = 0


Query: 13  QSEYPQIIMVQKFIDALSEQGFLDENFSNLRTLPENQNSLVIFCSDAEPKLETIEKALAD 72
           ++E+PQ  M+ KFI+AL +QGFLDENFS+L  L +N+N L +FC DAEPKL+ +EK+L +
Sbjct: 3   EAEHPQRHMLNKFINALRDQGFLDENFSSLGNLYDNRNMLALFCDDAEPKLDRVEKSLKN 62

Query: 73  EPLDFRTVINTVEMIRSGAVRVGGTRLAGACTVLLQHCNDSNIQRSKDAYKKLNWEYYVL 132
           E +DF+ ++  +E I+  A R+GG R+A AC  L + C  S+++R  +AYKK+NWEYY+L
Sbjct: 63  ESVDFQGLVTIIEQIKGNAARLGGKRVAEACAELQRSCGTSDVERCNEAYKKVNWEYYIL 122

Query: 133 RDCFHHILQ 142
           RDCFHHILQ
Sbjct: 123 RDCFHHILQ 131

[Close]

BLAST of HG10018141 vs. NCBI nr
Match: XP_023513178.1 (histidine-containing phosphotransfer protein 1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 159.5 bits (402), Expect = 2.2e-35
Identity = 71/130 (54.62%), Postives = 99/130 (76.15%), Query Frame = 0


Query: 13  QSEYPQIIMVQKFIDALSEQGFLDENFSNLRTLPENQNSLVIFCSDAEPKLETIEKALAD 72
           ++E+PQ  M+ KFI+AL +QGFLDENFS+L  L +N+N L +FC DAEPKL+ +EK+L +
Sbjct: 3   EAEHPQRHMLNKFINALRDQGFLDENFSSLGNLYDNRNMLALFCDDAEPKLDRVEKSLKN 62

Query: 73  EPLDFRTVINTVEMIRSGAVRVGGTRLAGACTVLLQHCNDSNIQRSKDAYKKLNWEYYVL 132
           E +DF+ +   +E I+  A R+GG R+A AC  L + C  S+++R  +AYKK+NWEYY+L
Sbjct: 63  ENVDFQGLATIIEQIKGNAARLGGKRVAEACAELQRSCGTSDVERCNEAYKKVNWEYYIL 122

Query: 133 RDCFHHILQV 143
           RDCFHHILQV
Sbjct: 123 RDCFHHILQV 132

[Close]

BLAST of HG10018141 vs. ExPASy TrEMBL
Match: A0A5D3CFG6 (Histidine-containing phosphotransfer protein 5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold315G001140 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 2.3e-41
Identity = 89/141 (63.12%), Postives = 109/141 (77.30%), Query Frame = 0


Query: 1   MSASASSSSSRPQSEYPQIIMVQKFIDALSEQGFLDENFSNLRTLPENQNSLVIFCSDAE 60
           MSA+ASSSSS PQ    Q  M+ KFIDAL +QGFLD +F+N RT P + +SLV FC ++E
Sbjct: 1   MSAAASSSSSHPQPPRSQQQMIHKFIDALRQQGFLDNDFNNRRTAPGHLDSLVTFCVESE 60

Query: 61  PKLETIEKALADEPLDFRTVINTVEMIRSGAVRVGGTRLAGACTVLLQHCNDSNIQRSKD 120
           PKLE I+KAL  E +DFRT INT EMIRS A RVGG+R+A AC  L +H N++N+  SK+
Sbjct: 61  PKLEIIQKALEGEHVDFRTAINTSEMIRSAATRVGGSRVASACIALQEHLNNNNLNGSKE 120

Query: 121 AYKKLNWEYYVLRDCFHHILQ 142
           AYKKL+WEYYV+RD FHHILQ
Sbjct: 121 AYKKLSWEYYVIRDSFHHILQ 141

[Close]

BLAST of HG10018141 vs. ExPASy TrEMBL
Match: A0A1S3CFS8 (histidine-containing phosphotransfer protein 5-like OS=Cucumis melo OX=3656 GN=LOC103500231 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 2.3e-41
Identity = 89/141 (63.12%), Postives = 109/141 (77.30%), Query Frame = 0


Query: 1   MSASASSSSSRPQSEYPQIIMVQKFIDALSEQGFLDENFSNLRTLPENQNSLVIFCSDAE 60
           MSA+ASSSSS PQ    Q  M+ KFIDAL +QGFLD +F+N RT P + +SLV FC ++E
Sbjct: 1   MSAAASSSSSHPQPPRSQQQMIHKFIDALRQQGFLDNDFNNRRTAPGHLDSLVTFCVESE 60

Query: 61  PKLETIEKALADEPLDFRTVINTVEMIRSGAVRVGGTRLAGACTVLLQHCNDSNIQRSKD 120
           PKLE I+KAL  E +DFRT INT EMIRS A RVGG+R+A AC  L +H N++N+  SK+
Sbjct: 61  PKLEIIQKALEGEHVDFRTAINTSEMIRSAATRVGGSRVASACIALQEHLNNNNLNGSKE 120

Query: 121 AYKKLNWEYYVLRDCFHHILQ 142
           AYKKL+WEYYV+RD FHHILQ
Sbjct: 121 AYKKLSWEYYVIRDSFHHILQ 141

[Close]

BLAST of HG10018141 vs. ExPASy TrEMBL
Match: A0A0A0LVC3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G153540 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 5.6e-40
Identity = 86/141 (60.99%), Postives = 109/141 (77.30%), Query Frame = 0


Query: 1   MSASASSSSSRPQSEYPQIIMVQKFIDALSEQGFLDENFSNLRTLPENQNSLVIFCSDAE 60
           MSA+ASSSSS  Q    Q  M+ KFIDAL +QGFLD++F+N RT P + +SLV FC ++E
Sbjct: 1   MSAAASSSSSHSQPPRSQQQMIHKFIDALRQQGFLDDDFNNRRTAPGHLDSLVTFCVESE 60

Query: 61  PKLETIEKALADEPLDFRTVINTVEMIRSGAVRVGGTRLAGACTVLLQHCNDSNIQRSKD 120
           PKLE I+K+L  E LDFRT I+T EMIRS A RVGG+R+A AC  L +H N++N+  SK+
Sbjct: 61  PKLEIIQKSLEGEHLDFRTAISTAEMIRSAAARVGGSRVASACIALQEHLNNNNLNGSKE 120

Query: 121 AYKKLNWEYYVLRDCFHHILQ 142
           AYKKL+WEYYV+RD FHH+LQ
Sbjct: 121 AYKKLSWEYYVIRDSFHHMLQ 141

[Close]

BLAST of HG10018141 vs. ExPASy TrEMBL
Match: A0A6J1FCU8 (uncharacterized protein LOC111444235 OS=Cucurbita moschata OX=3662 GN=LOC111444235 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 8.3e-36
Identity = 70/129 (54.26%), Postives = 99/129 (76.74%), Query Frame = 0


Query: 13  QSEYPQIIMVQKFIDALSEQGFLDENFSNLRTLPENQNSLVIFCSDAEPKLETIEKALAD 72
           ++E+PQ  M+ KFI+AL +QGFLDENFS+L  L +N+N L +FC DAEPKL+ +EK+L +
Sbjct: 3   EAEHPQRHMLNKFINALRDQGFLDENFSSLGNLYDNRNMLALFCDDAEPKLDRVEKSLKN 62

Query: 73  EPLDFRTVINTVEMIRSGAVRVGGTRLAGACTVLLQHCNDSNIQRSKDAYKKLNWEYYVL 132
           E +DF+ ++  +E I+  A R+GG R+A AC  L + C  S+++R  +AYKK+NWEYY+L
Sbjct: 63  ESVDFQGLVTIIEQIKGNAARLGGKRVAEACAELQRSCGTSDVERCNEAYKKVNWEYYIL 122

Query: 133 RDCFHHILQ 142
           RDCFHHILQ
Sbjct: 123 RDCFHHILQ 131

[Close]

BLAST of HG10018141 vs. ExPASy TrEMBL
Match: A0A6J1I088 (histidine-containing phosphotransfer protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111468539 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.9e-35
Identity = 70/129 (54.26%), Postives = 99/129 (76.74%), Query Frame = 0


Query: 13  QSEYPQIIMVQKFIDALSEQGFLDENFSNLRTLPENQNSLVIFCSDAEPKLETIEKALAD 72
           ++E+PQ  M+ KFI+AL +QGFLDENFS+L  L +N+N L +FC DAEPKL+ +EK+L +
Sbjct: 3   EAEHPQRHMLNKFINALRDQGFLDENFSSLGNLYDNRNMLSLFCDDAEPKLDRVEKSLKN 62

Query: 73  EPLDFRTVINTVEMIRSGAVRVGGTRLAGACTVLLQHCNDSNIQRSKDAYKKLNWEYYVL 132
           E +DF+ ++  +E I+  A R+GG R+A AC  L + C  S+++R  +AYKK+NWEYY+L
Sbjct: 63  ENVDFQGLVTIIEQIKGNAARLGGKRVAEACAELQRFCGTSDVERCNEAYKKVNWEYYIL 122

Query: 133 RDCFHHILQ 142
           RDCFHHILQ
Sbjct: 123 RDCFHHILQ 131

The following BLAST results are available for this feature:

BLAST of HG10018141 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895515.1	9.4e-50	73.43	histidine-containing phosphotransfer protein 1-like [Benincasa hispida]	[more]
XP_008461693.1	4.7e-41	63.12	PREDICTED: histidine-containing phosphotransfer protein 5-like [Cucumis melo] >K...	[more]
XP_031736154.1	1.2e-39	60.99	histidine-containing phosphotransfer protein 1-like [Cucumis sativus] >KGN64909....	[more]
XP_022938022.1	1.7e-35	54.26	uncharacterized protein LOC111444235 [Cucurbita moschata] >KAG6585983.1 Histidin...	[more]
XP_023513178.1	2.2e-35	54.62	histidine-containing phosphotransfer protein 1-like isoform X1 [Cucurbita pepo s...	[more]

BLAST of HG10018141 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10018141 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CFG6	2.3e-41	63.12	Histidine-containing phosphotransfer protein 5-like OS=Cucumis melo var. makuwa ...	[more]
A0A1S3CFS8	2.3e-41	63.12	histidine-containing phosphotransfer protein 5-like OS=Cucumis melo OX=3656 GN=L...	[more]
A0A0A0LVC3	5.6e-40	60.99	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G153540 PE=4 SV=1	[more]
A0A6J1FCU8	8.3e-36	54.26	uncharacterized protein LOC111444235 OS=Cucurbita moschata OX=3662 GN=LOC1114442...	[more]
A0A6J1I088	1.9e-35	54.26	histidine-containing phosphotransfer protein 1-like OS=Cucurbita maxima OX=3661 ...	[more]

BLAST of HG10018141 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036641	HPT domain superfamily	GENE3D	1.20.120.160	HPT domain	coord: 20..144 e-value: 7.7E-18 score: 66.7
IPR036641	HPT domain superfamily	SUPERFAMILY	47226	Histidine-containing phosphotransfer domain, HPT domain	coord: 29..141
None	No IPR available	PANTHER	PTHR28242:SF30	HISTIDINE-CONTAINING PHOSPHOTRANSFER PROTEIN 2	coord: 23..142
None	No IPR available	PANTHER	PTHR28242	FAMILY NOT NAMED	coord: 23..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10018141.1	HG10018141.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000160	phosphorelay signal transduction system
cellular_component	GO:0005737	cytoplasm