HG10017546 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCCTTGACCCACTTCGCCGGCATTGTTCCCGATGGGGAAAAACGACGGAGAACAGCCACTGCCGTCCGCCATCGGCTACAGGCCATCTGGCCAGGCTGCCGATGGCCGATGCTGTTGTGGGTGTGTTTCGATTCCAAGACTCATTGGCTTCAGATGCATCTTCATTCTGCTATTGTCCGTTGCCTTGTTCGTTTCTGCTGTTTTTTGGTTGCCCCCTTTTCTCCATTATGCAGATCAAAAGGATCTGGGTCTCAATTCGTCGTATCGAGGTGGGACTCTTCATCGATTCTGATATCTTTGGGGTTTTAGGGGTTCGTCGATTGCTGTTTCTTTTGTGGGGTAAATAGATCTGGGAATTTTTTTGAGAATCTGGTTTAGATTTTTGAGATTTTGTTGCTTGTTCCTGCTGATTGTGTGTGGTTCTGTGTTGGCTGAGGAAAATGAGGGTTATTAGAGGGATTTAGATTGGTTTGTTTGATGGATTTGGGCTAATTTTGATCTGGAACTTGATGAGTTTTTTATGGCGTTCTTCTTGGTGGGTTCCTAGAGGCTTGCCTGTAGAATCGTTTTGGTTTGGGGAAGTGAGAAGTAGAGAAAATCAAAAGTAGTTTTGAGTAACGGAAGGCCCTGATGTTCAGGCTTTGATTATCGTCTTTCCTAATTAAACATGGGGCACCTCATTGGAGCTTGCACTAGGATTGTTCTAGAATCAGTTATGCTTGTTATTCTTTACATAATTAAATTAATTACATGTCTTCATCATTAGTGAGAAATTTTGCTCAGAGGGCGTCTGTACCTCTACCTTCCATTATCCCAAAACAAAAAAAAAAAAAAAAAAGAAGAAAAACATAGAGAGCATGGATTGCTTGTTTCAGCCAAAAATGTATTTATTTTTCAACTTTTTTTTTGGGGGGAGGGGGTGTTGAACCGGAAGTTTGAATCAACTAAATTTTCCATTTCTAGGGATTTCAATTAATCTATCGGAGTTCATGTGACAAGTTACATGGCTTATTGGCTTAAGTAAATGGAGAAAAATCTAACATTTAAAACTTGTGTGTATGTGTATGTGTATATTTTGAGTTCAATAAATAAGAGGCGGAGATTCGAAACTCCGACCTCAAGGATAACAAGTGGTACTTAAACCGGTGAACTCTTATATTGGCTAAAACTTGTGTAATTGACCTTTATCACGTGGTTTGTCAAAAATTGGATAAACATATAATTGTTTATTTTCAATCCTTTTTCTGAATAATTGGATGTTAGCACTTTTACCCACTTAAATTTTATGTACTCATGCAAAATGCTAAGATTCTTTTTTTTTTTTTTTGAATAAAATCATTTACTCCGGTCATCAAGGCACAATGCTGTCGTATGCCTCCTCCCTTCAAAAGTTTTGCCTTAGAGGTGAGAAGCCTCACCATGCAAATAAGAAAAAGGAAGAAAGTAATTTCTCTTAACTGCCTACACCATCCATATGCAGCTAGAGTGCAATGTATATTAAGCTAATGATTGGTTTGGCCTTTGTTTAGTTTAAAGTTAGATACTTGTATTTGAAATGGATCATCCATTTAATGAACCAACTTTGCGAGTTACTTGTGATTTTTCCCTTCTCCTTGGATATTGGTTAGGTTGGTAGGGCCATAAGGTTAAAAGGTTGTTTTATAATGATGCGTGGAGATTCTTCTTCGCCTTTAGTTGGAACTGAACTGTAGAATGTAGAGAGTGTTTTGCATTCAAGGAGTTTTGGATTTGGCTCGTCTCTGCTTTTTATTGCAGCTCCTTGTCCAAATACTTCCACAATTCAAGAGCCCTATTGTAGTCTTCTTTTTTGGTTATGGTGTATTTCTTATCTTCCCCTCCTTTTTGTCAAATGAATAAATTGTTTTGTGCGTAATGAGTCAGAACAGTGTTTTGGTTTTTCAAATGATCTATTTTGGCTGTTAAAGTGTATATATCAATTTAAAATAAAGGATGAGTTATATGGCTAGTTCATAAACTAATGTTTTAGTTGATTTCAGCAGATTTATGTAAAATGATATTATTTGATTTCCATATCGATAGAATGTTACCTAATATTCGTGTGTTGAAGTAAGGTATTGATTCCACAGTTCTACATGGTTGAAAATTGCAAGTTGTTTGAGGTCGATACACACGCCGATGCAACAGTTTCTTGACTTGAGGGTGGGAGGGTATAGTATTTTTCTTTAGTTGCTTTTGTTTTTGTTGACATTTTCAGTATTGTTTTGCGACTATAATAGTAACAATAGTAGTATGTTGACTTCTTAAAATTGTTTAGAATCACAAAACTGTTTTATATGGGTATAGTTAGAGCAACTGTAATTGACATTGTAGTTCCTTAAAGCTATCCTTCCATCTTGCAAACTTGACATATTATGTGTGTGCAGTGGGAATTTATATTAACGACGAAAGTCAACATAAATTCTTTAACAAGAATCAAAATGGCTCGACATGTCATCTCTGACTAATTTCTGTTTCCAGGTCATGATATAGTAGCAACATTCAATGTTGAGAGACCGGTTTCTTTGCTGGAAGACAATATCGAGCAACTCCAAACCGACATTTTTGAAGAGTTCCCTATACCTTCTATCAAAGTATCTACTCTTTTTTATTCTGATTGATTGTGAACTCTATATACTTTATGCATATTGATCTGACGCTCTTTCAAATCAGGTGGATATACTATCTCTAGAACCATTATCTGGATCCAACCGTACAAAAGTTGTGTTCAGCCTCGATCCAGATGGCGATGACTTGGAAATCTCGTCAACTTATCTAAGTTTAATCAGGTCAACCATTGCAAGTCTAGTAACGAATCAGTTCCTCCGCATTACTAAATCCATGTTTGGGGAGGCTTTTTCGTTTGAAGTACTGAAATTCCCCAGAGGAATAACTATAATCCCGCCACAGAGTGCATTTCTTTTGCAGAAAGTGCAAATTCTTTTCAACTTTACGTTGAACTTCTCTATTCATCAGATTCAAGTACATTTCAGTGAACTGACCAGCCAACTGGAGGCGGGATTACGACTAGCTCCATATGAGGTTTGGTGTCTCTCTATCTGCTCATTCGATTTGCAATGCATTAATTTGGCTGGATGAATTTAGGTTTCCTTTAAATAATGTTTTTGTTTTTCATTTTCTAATATTAAAAATAAGATTGTTATCAATCGAGACCTTAGTTTAACTCTCATGAGCATACAGGCTACCAAAATTGTTTTCATTGTTCTTTCTGTAGCTGGATATCTTTTAACATGATGAGTAAAAAAAGTTGTATTTCTTGAGCTATTATTATTCCTATTTTTCCTTGTTTCAACGGAAATGTGTTCCGATATTTGAATTACTTTGCACTTTTATTGTAAAAATTAGCAAATGCTTGAGTTTGATCTTTGACGGTTACGAGTTGTTTTGTCCTAAATGCAGATTTTATATATTAAGCTGTGGAATGCAGAAGGTTCGACTGTGACTGCCCCTACGATTGTCCAGTCGTCTGTACTTCTTGAAGTTGGAAATACTCCATCAATGCGACGGCTGAAGCAGCTAGCTCAAACAATCTCAGGTTCTAATTCTAGCAATCTCGGTCTGAATAATACGGAGTTTGGAAAGGTGAAGCAAGTTCGCCTTTCGTCGATTCTTAAATACTCCCTCAATGGGAGTGACGGGAACGGCCCCGCAAGGTCACCTTCTCCTGCTCCTGCACCCCAGTCCCATAACTACCCTCATCCCCCGACTCACCACCATCACCACCATCACACCCCTCTAACCCCTGCAATTTCACCTGCCCCTGCAACCGAGAAGGGTGCACCAGAATACAGTTCGCCTGCCCCTGAAAGAAGCGCAGCATCACCTAAGAGAAGTTACGCGGCAAAGCCGCCTGGTTGTCAGTATAGATACAAGAGGAAGTCTGGTAGGAAAGAAGGAAAGCAATCTCATTTAACCCCGCTTGCTTCACCCATTATATCTCCTGATCATTCTGCTGCATCGCCATCGCCATCGCCACAACATCAAGTAAACCCACCAGCAGCACCCGTCTCTCGAGCTCCGGCATTAACTCCATTGCCAAATGTCGTTTACGCTCATGTTCAACCACCTTCCAAAAGCGACTCCAGCCACCCGGAAAAATCCACGACAAATCCATTAGTTGCGCCATCTCCATCTCCATGTGAGTAACACACTGATTCCGGTAGGAAACTGGATAGTGTTTTAACTACAAAAGTCCCATATATTCCATTGAACAATCCCAAATTTTCCATTGTGAAAACTTTTTCAACTGACTCAACTGATTTTGCAGCTGGTGCTGATCGTCGTCGTATGATCACTCAATGGGGATTCACACTGTTTCTTATTCTCGCACGCCATATGTAA ATGGCCCTTGACCCACTTCGCCGGCATTGTTCCCGATGGGGAAAAACGACGGAGAACAGCCACTGCCGTCCGCCATCGGCTACAGGCCATCTGGCCAGGCTGCCGATGGCCGATGCTGTTGTGGGTGTGTTTCGATTCCAAGACTCATTGGCTTCAGATGCATCTTCATTCTGCTATTGTCCGTTGCCTTGTTCGTTTCTGCTGTTTTTTGGTTGCCCCCTTTTCTCCATTATGCAGATCAAAAGGATCTGGGTCTCAATTCGTCGTATCGAGGTGGGACTCTTCATCGATTCTGATATCTTTGGGGTTTTAGGGGTTCGTCGATTGCTGTTTCTTTTGTGGGGTCATGATATAGTAGCAACATTCAATGTTGAGAGACCGGTTTCTTTGCTGGAAGACAATATCGAGCAACTCCAAACCGACATTTTTGAAGAGTTCCCTATACCTTCTATCAAAGTGGATATACTATCTCTAGAACCATTATCTGGATCCAACCGTACAAAAGTTGTGTTCAGCCTCGATCCAGATGGCGATGACTTGGAAATCTCGTCAACTTATCTAAGTTTAATCAGGTCAACCATTGCAAGTCTAGTAACGAATCAGTTCCTCCGCATTACTAAATCCATGTTTGGGGAGGCTTTTTCGTTTGAAGTACTGAAATTCCCCAGAGGAATAACTATAATCCCGCCACAGAGTGCATTTCTTTTGCAGAAAGTGCAAATTCTTTTCAACTTTACGTTGAACTTCTCTATTCATCAGATTCAAGTACATTTCAGTGAACTGACCAGCCAACTGGAGGCGGGATTACGACTAGCTCCATATGAGATTTTATATATTAAGCTGTGGAATGCAGAAGGTTCGACTGTGACTGCCCCTACGATTGTCCAGTCGTCTGTACTTCTTGAAGTTGGAAATACTCCATCAATGCGACGGCTGAAGCAGCTAGCTCAAACAATCTCAGGTTCTAATTCTAGCAATCTCGGTCTGAATAATACGGAGTTTGGAAAGGTGAAGCAAGTTCGCCTTTCGTCGATTCTTAAATACTCCCTCAATGGGAGTGACGGGAACGGCCCCGCAAGGTCACCTTCTCCTGCTCCTGCACCCCAGTCCCATAACTACCCTCATCCCCCGACTCACCACCATCACCACCATCACACCCCTCTAACCCCTGCAATTTCACCTGCCCCTGCAACCGAGAAGGGTGCACCAGAATACAGTTCGCCTGCCCCTGAAAGAAGCGCAGCATCACCTAAGAGAAGTTACGCGGCAAAGCCGCCTGGTTGTCAGTATAGATACAAGAGGAAGTCTGGTAGGAAAGAAGGAAAGCAATCTCATTTAACCCCGCTTGCTTCACCCATTATATCTCCTGATCATTCTGCTGCATCGCCATCGCCATCGCCACAACATCAAGTAAACCCACCAGCAGCACCCGTCTCTCGAGCTCCGGCATTAACTCCATTGCCAAATGTCGTTTACGCTCATGTTCAACCACCTTCCAAAAGCGACTCCAGCCACCCGGAAAAATCCACGACAAATCCATTAGTTGCGCCATCTCCATCTCCATCTGGTGCTGATCGTCGTCGTATGATCACTCAATGGGGATTCACACTGTTTCTTATTCTCGCACGCCATATGTAA ATGGCCCTTGACCCACTTCGCCGGCATTGTTCCCGATGGGGAAAAACGACGGAGAACAGCCACTGCCGTCCGCCATCGGCTACAGGCCATCTGGCCAGGCTGCCGATGGCCGATGCTGTTGTGGGTGTGTTTCGATTCCAAGACTCATTGGCTTCAGATGCATCTTCATTCTGCTATTGTCCGTTGCCTTGTTCGTTTCTGCTGTTTTTTGGTTGCCCCCTTTTCTCCATTATGCAGATCAAAAGGATCTGGGTCTCAATTCGTCGTATCGAGGTGGGACTCTTCATCGATTCTGATATCTTTGGGGTTTTAGGGGTTCGTCGATTGCTGTTTCTTTTGTGGGGTCATGATATAGTAGCAACATTCAATGTTGAGAGACCGGTTTCTTTGCTGGAAGACAATATCGAGCAACTCCAAACCGACATTTTTGAAGAGTTCCCTATACCTTCTATCAAAGTGGATATACTATCTCTAGAACCATTATCTGGATCCAACCGTACAAAAGTTGTGTTCAGCCTCGATCCAGATGGCGATGACTTGGAAATCTCGTCAACTTATCTAAGTTTAATCAGGTCAACCATTGCAAGTCTAGTAACGAATCAGTTCCTCCGCATTACTAAATCCATGTTTGGGGAGGCTTTTTCGTTTGAAGTACTGAAATTCCCCAGAGGAATAACTATAATCCCGCCACAGAGTGCATTTCTTTTGCAGAAAGTGCAAATTCTTTTCAACTTTACGTTGAACTTCTCTATTCATCAGATTCAAGTACATTTCAGTGAACTGACCAGCCAACTGGAGGCGGGATTACGACTAGCTCCATATGAGATTTTATATATTAAGCTGTGGAATGCAGAAGGTTCGACTGTGACTGCCCCTACGATTGTCCAGTCGTCTGTACTTCTTGAAGTTGGAAATACTCCATCAATGCGACGGCTGAAGCAGCTAGCTCAAACAATCTCAGGTTCTAATTCTAGCAATCTCGGTCTGAATAATACGGAGTTTGGAAAGGTGAAGCAAGTTCGCCTTTCGTCGATTCTTAAATACTCCCTCAATGGGAGTGACGGGAACGGCCCCGCAAGGTCACCTTCTCCTGCTCCTGCACCCCAGTCCCATAACTACCCTCATCCCCCGACTCACCACCATCACCACCATCACACCCCTCTAACCCCTGCAATTTCACCTGCCCCTGCAACCGAGAAGGGTGCACCAGAATACAGTTCGCCTGCCCCTGAAAGAAGCGCAGCATCACCTAAGAGAAGTTACGCGGCAAAGCCGCCTGGTTGTCAGTATAGATACAAGAGGAAGTCTGGTAGGAAAGAAGGAAAGCAATCTCATTTAACCCCGCTTGCTTCACCCATTATATCTCCTGATCATTCTGCTGCATCGCCATCGCCATCGCCACAACATCAAGTAAACCCACCAGCAGCACCCGTCTCTCGAGCTCCGGCATTAACTCCATTGCCAAATGTCGTTTACGCTCATGTTCAACCACCTTCCAAAAGCGACTCCAGCCACCCGGAAAAATCCACGACAAATCCATTAGTTGCGCCATCTCCATCTCCATCTGGTGCTGATCGTCGTCGTATGATCACTCAATGGGGATTCACACTGTTTCTTATTCTCGCACGCCATATGTAA MALDPLRRHCSRWGKTTENSHCRPPSATGHLARLPMADAVVGVFRFQDSLASDASSFCYCPLPCSFLLFFGCPLFSIMQIKRIWVSIRRIEVGLFIDSDIFGVLGVRRLLFLLWGHDIVATFNVERPVSLLEDNIEQLQTDIFEEFPIPSIKVDILSLEPLSGSNRTKVVFSLDPDGDDLEISSTYLSLIRSTIASLVTNQFLRITKSMFGEAFSFEVLKFPRGITIIPPQSAFLLQKVQILFNFTLNFSIHQIQVHFSELTSQLEAGLRLAPYEILYIKLWNAEGSTVTAPTIVQSSVLLEVGNTPSMRRLKQLAQTISGSNSSNLGLNNTEFGKVKQVRLSSILKYSLNGSDGNGPARSPSPAPAPQSHNYPHPPTHHHHHHHTPLTPAISPAPATEKGAPEYSSPAPERSAASPKRSYAAKPPGCQYRYKRKSGRKEGKQSHLTPLASPIISPDHSAASPSPSPQHQVNPPAAPVSRAPALTPLPNVVYAHVQPPSKSDSSHPEKSTTNPLVAPSPSPSGADRRRMITQWGFTLFLILARHM Homology
BLAST of HG10017546 vs. NCBI nr
Match: XP_038882638.1 (uncharacterized protein LOC120073837 [Benincasa hispida]) HSP 1 Score: 731.5 bits (1887), Expect = 5.4e-207 Identity = 391/431 (90.72%), Postives = 403/431 (93.50%), Query Frame = 0
BLAST of HG10017546 vs. NCBI nr
Match: KGN54878.2 (hypothetical protein Csa_012907 [Cucumis sativus]) HSP 1 Score: 730.7 bits (1885), Expect = 9.2e-207 Identity = 388/431 (90.02%), Postives = 399/431 (92.58%), Query Frame = 0
BLAST of HG10017546 vs. NCBI nr
Match: XP_004144318.1 (uncharacterized protein LOC101216010 isoform X1 [Cucumis sativus]) HSP 1 Score: 730.7 bits (1885), Expect = 9.2e-207 Identity = 388/431 (90.02%), Postives = 399/431 (92.58%), Query Frame = 0
BLAST of HG10017546 vs. NCBI nr
Match: KAA0025811.1 (Zinc finger family protein, putative isoform 1 [Cucumis melo var. makuwa] >TYK09645.1 Zinc finger family protein, putative isoform 1 [Cucumis melo var. makuwa]) HSP 1 Score: 721.1 bits (1860), Expect = 7.3e-204 Identity = 383/431 (88.86%), Postives = 398/431 (92.34%), Query Frame = 0
BLAST of HG10017546 vs. NCBI nr
Match: XP_008455751.1 (PREDICTED: uncharacterized protein LOC103495852 [Cucumis melo]) HSP 1 Score: 721.1 bits (1860), Expect = 7.3e-204 Identity = 383/431 (88.86%), Postives = 398/431 (92.34%), Query Frame = 0
BLAST of HG10017546 vs. ExPASy TrEMBL
Match: A0A0A0KYS3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G420140 PE=4 SV=1) HSP 1 Score: 730.7 bits (1885), Expect = 4.4e-207 Identity = 388/431 (90.02%), Postives = 399/431 (92.58%), Query Frame = 0
BLAST of HG10017546 vs. ExPASy TrEMBL
Match: A0A5A7SNH7 (Zinc finger family protein, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold447G00440 PE=4 SV=1) HSP 1 Score: 721.1 bits (1860), Expect = 3.5e-204 Identity = 383/431 (88.86%), Postives = 398/431 (92.34%), Query Frame = 0
BLAST of HG10017546 vs. ExPASy TrEMBL
Match: A0A1S3C173 (uncharacterized protein LOC103495852 OS=Cucumis melo OX=3656 GN=LOC103495852 PE=4 SV=1) HSP 1 Score: 721.1 bits (1860), Expect = 3.5e-204 Identity = 383/431 (88.86%), Postives = 398/431 (92.34%), Query Frame = 0
BLAST of HG10017546 vs. ExPASy TrEMBL
Match: A0A6J1HW39 (uncharacterized protein LOC111467196 OS=Cucurbita maxima OX=3661 GN=LOC111467196 PE=4 SV=1) HSP 1 Score: 658.7 bits (1698), Expect = 2.1e-185 Identity = 360/438 (82.19%), Postives = 377/438 (86.07%), Query Frame = 0
BLAST of HG10017546 vs. ExPASy TrEMBL
Match: A0A6J1HSR1 (uncharacterized protein LOC111466276 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111466276 PE=4 SV=1) HSP 1 Score: 654.1 bits (1686), Expect = 5.3e-184 Identity = 358/432 (82.87%), Postives = 380/432 (87.96%), Query Frame = 0
BLAST of HG10017546 vs. TAIR 10
Match: AT3G56590.2 (hydroxyproline-rich glycoprotein family protein ) HSP 1 Score: 310.8 bits (795), Expect = 2.1e-84 Identity = 201/408 (49.26%), Postives = 254/408 (62.25%), Query Frame = 0
BLAST of HG10017546 vs. TAIR 10
Match: AT3G56590.1 (hydroxyproline-rich glycoprotein family protein ) HSP 1 Score: 310.5 bits (794), Expect = 2.8e-84 Identity = 201/412 (48.79%), Postives = 255/412 (61.89%), Query Frame = 0
BLAST of HG10017546 vs. TAIR 10
Match: AT3G10810.1 (zinc finger (C3HC4-type RING finger) family protein ) HSP 1 Score: 301.2 bits (770), Expect = 1.7e-81 Identity = 217/443 (48.98%), Postives = 267/443 (60.27%), Query Frame = 0
BLAST of HG10017546 vs. TAIR 10
Match: AT1G10790.1 (BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT3G56590.2); Has 78 Blast hits to 78 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 117.1 bits (292), Expect = 4.5e-26 Identity = 88/253 (34.78%), Postives = 130/253 (51.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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