HG10017388 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAGGAATATCTTATCGAGGCAATCGTATTTGCTTCGGTAGATACGCTATTCAGGCACTTGAACCCGCTTGGATCACATCTAGACAAATCGAAGCGGGACGAAGGGCAATGACACGAAATGCACGACGCGGCGGAAAAATATGGGTACGTATATTTCCAGACAAACCCGTTACACTAAGACCCACAGAAACACGTATGGGTTCAGGGAAAGGATCCCCCGAATATTGGGTAGCTGTTGTTAAACCAGGTAGAATACTTTATGAAATGAGTGGAGTAGCCGAAAATATAGCCAGAAAAGCTATTTCAATAGCGGCATCCAAAATGCCTATACGAACCCAATTCATTACTTCGGGATAGAAATGTAGAATCAAAGGAAAGCGGTCTTTGTTTGAGATGAAAAAAAAAACAATTGCAGATTTCTTTTTTTTTTGGAAAAACAATATTTCTTTTTTTTACTTCGCCCTTTGCATTGAAAGAAAAGATTCCAAAATAATATGATTCAACCTCAAACCCTTTTGAATGTAGCAGATAACAGCGGAGCCCGAGAATTGATGTGTATTCGAATCATAGGGGCTAGTAATCGACGATATGCTCATATTGGTGACGTTATTGTTGCTGTAATCAAGAAAGCCGTCCCAAATACACCTCTCGAAAGATCAGAAGTGATCAGAGCTGTAATTGTACGTACTTGTAAAGAACTCAAACGAGAAAACGGTATGATAATACGATATGATGACAATGCTGCGGTTGTTATTGATCAAGAAGGAAATCCAAAAGGAACTCGAATTTTTGGTGCGATTGCCCGAGAATTGAGACAGTTAAATTTCACTAAAATAATTTCATTAGCACCTGAAGTATTATAA ATGAAAGGAATATCTTATCGAGGCAATCGTATTTGCTTCGGTAGATACGCTATTCAGGCACTTGAACCCGCTTGGATCACATCTAGACAAATCGAAGCGGGACGAAGGGCAATGACACGAAATGCACGACGCGGCGGAAAAATATGGGTACGTATATTTCCAGACAAACCCGTTACACTAAGACCCACAGAAACACGTATGGGTTCAGGGAAAGGATCCCCCGAATATTGGGTAGCTGTTGTTAAACCAGATAACAGCGGAGCCCGAGAATTGATGTGTATTCGAATCATAGGGGCTAGTAATCGACGATATGCTCATATTGGTGACGTTATTGTTGCTGTAATCAAGAAAGCCGTCCCAAATACACCTCTCGAAAGATCAGAAGTGATCAGAGCTGTAATTGTACGTACTTGTAAAGAACTCAAACGAGAAAACGGTATGATAATACGATATGATGACAATGCTGCGGTTGTTATTGATCAAGAAGGAAATCCAAAAGGAACTCGAATTTTTGGTGCGATTGCCCGAGAATTGAGACAGTTAAATTTCACTAAAATAATTTCATTAGCACCTGAAGTATTATAA ATGAAAGGAATATCTTATCGAGGCAATCGTATTTGCTTCGGTAGATACGCTATTCAGGCACTTGAACCCGCTTGGATCACATCTAGACAAATCGAAGCGGGACGAAGGGCAATGACACGAAATGCACGACGCGGCGGAAAAATATGGGTACGTATATTTCCAGACAAACCCGTTACACTAAGACCCACAGAAACACGTATGGGTTCAGGGAAAGGATCCCCCGAATATTGGGTAGCTGTTGTTAAACCAGATAACAGCGGAGCCCGAGAATTGATGTGTATTCGAATCATAGGGGCTAGTAATCGACGATATGCTCATATTGGTGACGTTATTGTTGCTGTAATCAAGAAAGCCGTCCCAAATACACCTCTCGAAAGATCAGAAGTGATCAGAGCTGTAATTGTACGTACTTGTAAAGAACTCAAACGAGAAAACGGTATGATAATACGATATGATGACAATGCTGCGGTTGTTATTGATCAAGAAGGAAATCCAAAAGGAACTCGAATTTTTGGTGCGATTGCCCGAGAATTGAGACAGTTAAATTTCACTAAAATAATTTCATTAGCACCTGAAGTATTATAA MKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPDNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELRQLNFTKIISLAPEVL Homology
BLAST of HG10017388 vs. NCBI nr
Match: KAF3449786.1 (hypothetical protein FNV43_RR05864 [Rhamnella rubrinervis]) HSP 1 Score: 373.6 bits (958), Expect = 1.0e-99 Identity = 185/195 (94.87%), Postives = 193/195 (98.97%), Query Frame = 0
BLAST of HG10017388 vs. NCBI nr
Match: XP_022728609.1 (uncharacterized protein LOC111284164 [Durio zibethinus] >XP_022732752.1 uncharacterized protein LOC111286845 [Durio zibethinus] >XP_022735748.1 uncharacterized protein LOC111289142 [Durio zibethinus] >XP_022735765.1 uncharacterized protein LOC111289179 [Durio zibethinus]) HSP 1 Score: 373.2 bits (957), Expect = 1.3e-99 Identity = 183/194 (94.33%), Postives = 189/194 (97.42%), Query Frame = 0
BLAST of HG10017388 vs. NCBI nr
Match: XP_034910603.1 (50S ribosomal protein L14, chloroplastic [Populus alba]) HSP 1 Score: 372.5 bits (955), Expect = 2.3e-99 Identity = 183/194 (94.33%), Postives = 190/194 (97.94%), Query Frame = 0
BLAST of HG10017388 vs. NCBI nr
Match: OIW20051.1 (hypothetical protein TanjilG_32007 [Lupinus angustifolius]) HSP 1 Score: 365.2 bits (936), Expect = 3.6e-97 Identity = 179/195 (91.79%), Postives = 190/195 (97.44%), Query Frame = 0
BLAST of HG10017388 vs. NCBI nr
Match: KAD7117008.1 (hypothetical protein E3N88_04276 [Mikania micrantha]) HSP 1 Score: 364.8 bits (935), Expect = 4.7e-97 Identity = 180/199 (90.45%), Postives = 187/199 (93.97%), Query Frame = 0
BLAST of HG10017388 vs. ExPASy Swiss-Prot
Match: Q8WKP4 (50S ribosomal protein L14, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl14 PE=2 SV=1) HSP 1 Score: 216.9 bits (551), Expect = 2.1e-55 Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0
BLAST of HG10017388 vs. ExPASy Swiss-Prot
Match: Q49KW2 (50S ribosomal protein L14, chloroplastic OS=Eucalyptus globulus subsp. globulus OX=71271 GN=rpl14 PE=3 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 6.7e-54 Identity = 105/111 (94.59%), Postives = 111/111 (100.00%), Query Frame = 0
BLAST of HG10017388 vs. ExPASy Swiss-Prot
Match: B1A971 (50S ribosomal protein L14, chloroplastic OS=Carica papaya OX=3649 GN=rpl14 PE=3 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 1.1e-53 Identity = 107/111 (96.40%), Postives = 109/111 (98.20%), Query Frame = 0
BLAST of HG10017388 vs. ExPASy Swiss-Prot
Match: A0A372 (50S ribosomal protein L14, chloroplastic OS=Coffea arabica OX=13443 GN=rpl14 PE=3 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 1.1e-53 Identity = 106/111 (95.50%), Postives = 110/111 (99.10%), Query Frame = 0
BLAST of HG10017388 vs. ExPASy Swiss-Prot
Match: Q09ME1 (50S ribosomal protein L14, chloroplastic OS=Citrus sinensis OX=2711 GN=rpl14 PE=3 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 1.9e-53 Identity = 105/111 (94.59%), Postives = 110/111 (99.10%), Query Frame = 0
BLAST of HG10017388 vs. ExPASy TrEMBL
Match: A0A6P5XJN5 (30S ribosomal protein S3, chloroplastic OS=Durio zibethinus OX=66656 GN=LOC111284164 PE=3 SV=1) HSP 1 Score: 373.2 bits (957), Expect = 6.4e-100 Identity = 183/194 (94.33%), Postives = 189/194 (97.42%), Query Frame = 0
BLAST of HG10017388 vs. ExPASy TrEMBL
Match: A0A394DIF1 (Ribosomal_L16 domain-containing protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_32007 PE=3 SV=1) HSP 1 Score: 365.2 bits (936), Expect = 1.7e-97 Identity = 179/195 (91.79%), Postives = 190/195 (97.44%), Query Frame = 0
BLAST of HG10017388 vs. ExPASy TrEMBL
Match: A0A5N6PW49 (Ribosomal_L16 domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_04276 PE=3 SV=1) HSP 1 Score: 364.8 bits (935), Expect = 2.3e-97 Identity = 180/199 (90.45%), Postives = 187/199 (93.97%), Query Frame = 0
BLAST of HG10017388 vs. ExPASy TrEMBL
Match: A0A385G255 (Ribosomal protein L14 OS=Ammopiptanthus mongolicus OX=126911 GN=rpl14 PE=3 SV=1) HSP 1 Score: 364.4 bits (934), Expect = 3.0e-97 Identity = 178/195 (91.28%), Postives = 189/195 (96.92%), Query Frame = 0
BLAST of HG10017388 vs. ExPASy TrEMBL
Match: A0A067KET2 (Ribosomal_L16 domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_15169 PE=3 SV=1) HSP 1 Score: 364.0 bits (933), Expect = 3.9e-97 Identity = 176/194 (90.72%), Postives = 188/194 (96.91%), Query Frame = 0
BLAST of HG10017388 vs. TAIR 10
Match: ATCG00780.1 (ribosomal protein L14 ) HSP 1 Score: 208.0 bits (528), Expect = 6.9e-54 Identity = 104/111 (93.69%), Postives = 108/111 (97.30%), Query Frame = 0
BLAST of HG10017388 vs. TAIR 10
Match: ATCG00790.1 (ribosomal protein L16 ) HSP 1 Score: 166.4 bits (420), Expect = 2.3e-41 Identity = 76/83 (91.57%), Postives = 79/83 (95.18%), Query Frame = 0
BLAST of HG10017388 vs. TAIR 10
Match: AT2G28830.1 (PLANT U-BOX 12 ) HSP 1 Score: 117.5 bits (293), Expect = 1.2e-26 Identity = 59/82 (71.95%), Postives = 66/82 (80.49%), Query Frame = 0
BLAST of HG10017388 vs. TAIR 10
Match: AT5G46160.1 (Ribosomal protein L14p/L23e family protein ) HSP 1 Score: 87.8 bits (216), Expect = 1.0e-17 Identity = 45/117 (38.46%), Postives = 73/117 (62.39%), Query Frame = 0
BLAST of HG10017388 vs. TAIR 10
Match: AT5G46160.2 (Ribosomal protein L14p/L23e family protein ) HSP 1 Score: 87.8 bits (216), Expect = 1.0e-17 Identity = 45/117 (38.46%), Postives = 73/117 (62.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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