HG10017378 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10017378
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	NAD(P)H-quinone oxidoreductase subunit J, chloroplastic
Location	Chr03: 13903941 .. 13904417 (-)
RNA-Seq Expression	HG10017378
Synteny	HG10017378

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGGGTCATTTGTCTTCTTGGCTAGTCAAACATGGACTGGTTCATAGATCTTTGGGTTTCGATTACCAAGGAATAGAGACTTTACAAATAAAGCCCGAGGAATGGCATTCCATTGCAGTCATTTTATATGTATATGGTTACAATTATCTACGTTCCCAATGTGCTTATGATGTAGCACCAGGCGGACTGTTAGCTAGTGTGTATCATCTTACGAGAATCGAGTATGGTATAGATCAACCGGAAGAGGTATGCATAAAAGTATTTGCCGCAAGGATAAATCCTAGAATTCCGTCTGTTTTCTGGGTTTGGAAAAGTGCGGATTTTCCAGAAAGGGAATCTTATGATATGTTGGGAATTTCTTATGATAATCATCCACGTCTAAAGCGTATCTTAATGCCTGAAAGTTGGGTAGGATGGCCCTTACGTAAGGATTATATTGCCCCCAATTTTTATGAAATACAAGATGCTCATTAA

mRNA sequence

ATGCAGGGTCATTTGTCTTCTTGGCTAGTCAAACATGGACTGGTTCATAGATCTTTGGGTTTCGATTACCAAGGAATAGAGACTTTACAAATAAAGCCCGAGGAATGGCATTCCATTGCAGTCATTTTATATGTATATGGTTACAATTATCTACGTTCCCAATGTGCTTATGATGTAGCACCAGGCGGACTGTTAGCTAGTGTGTATCATCTTACGAGAATCGAGTATGGTATAGATCAACCGGAAGAGGTATGCATAAAAGTATTTGCCGCAAGGATAAATCCTAGAATTCCGTCTGTTTTCTGGGTTTGGAAAAGTGCGGATTTTCCAGAAAGGGAATCTTATGATATGTTGGGAATTTCTTATGATAATCATCCACGTCTAAAGCGTATCTTAATGCCTGAAAGTTGGGTAGGATGGCCCTTACGTAAGGATTATATTGCCCCCAATTTTTATGAAATACAAGATGCTCATTAA

Coding sequence (CDS)

ATGCAGGGTCATTTGTCTTCTTGGCTAGTCAAACATGGACTGGTTCATAGATCTTTGGGTTTCGATTACCAAGGAATAGAGACTTTACAAATAAAGCCCGAGGAATGGCATTCCATTGCAGTCATTTTATATGTATATGGTTACAATTATCTACGTTCCCAATGTGCTTATGATGTAGCACCAGGCGGACTGTTAGCTAGTGTGTATCATCTTACGAGAATCGAGTATGGTATAGATCAACCGGAAGAGGTATGCATAAAAGTATTTGCCGCAAGGATAAATCCTAGAATTCCGTCTGTTTTCTGGGTTTGGAAAAGTGCGGATTTTCCAGAAAGGGAATCTTATGATATGTTGGGAATTTCTTATGATAATCATCCACGTCTAAAGCGTATCTTAATGCCTGAAAGTTGGGTAGGATGGCCCTTACGTAAGGATTATATTGCCCCCAATTTTTATGAAATACAAGATGCTCATTAA

Protein sequence

MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH

Homology

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BLAST of HG10017378 vs. NCBI nr
Match: YP_009236283.1 (NADH-plastoquinone oxidoreductase subunit J [Gynostemma pentaphyllum] >YP_009317389.1 NADH dehydrogenase subunit J [Coccinia grandis] >YP_009420797.1 NADH dehydrogenase subunit J [Citrullus colocynthis] >YP_009430630.1 NADH dehydrogenase subunit J [Gynostemma cardiospermum] >YP_009431645.1 NADH dehydrogenase subunit J [Citrullus rehmii] >YP_009439807.1 NADH dehydrogenase subunit J [Gynostemma laxiflorum] >YP_009439894.1 NADH dehydrogenase subunit J [Gynostemma caulopterum] >YP_009440160.1 NADH dehydrogenase subunit J [Gynostemma longipes] >YP_009440247.1 NADH dehydrogenase subunit J [Gynostemma burmanicum (nom. inval.)] >YP_009440334.1 NADH dehydrogenase subunit J [Gynostemma pubescens] >YP_009447453.1 NADH dehydrogenase subunit J [Cucurbita maxima] >YP_009447538.1 NADH dehydrogenase subunit J [Cucurbita moschata] >YP_009456064.1 NADH dehydrogenase subunit J [Momordica charantia] >YP_009456149.1 NADH dehydrogenase subunit J [Lagenaria siceraria] >YP_009468864.1 NADH dehydrogenase subunit J [Gynostemma compressum] >YP_009505083.1 NADH dehydrogenase subunit J [Cucurbita pepo] >YP_009751825.1 NADH dehydrogenase subunit J [Indofevillea khasiana] >YP_009751993.1 NADH dehydrogenase subunit J [Cionosicys macranthus] >YP_009752078.1 NADH dehydrogenase subunit J [Dendrosicyos socotranus] >YP_009752669.1 NADH dehydrogenase subunit J [Ampelosycios humblotii] >YP_009752753.1 NADH dehydrogenase subunit J [Cyclantheropsis parviflora] >YP_009752838.1 NADH dehydrogenase subunit J [Baijiania yunnanensis] >YP_009753007.1 NADH dehydrogenase subunit J [Gerrardanthus macrorhizus] >YP_009753092.1 NADH dehydrogenase subunit J [Corallocarpus boehmii] >YP_009753261.1 NADH dehydrogenase subunit J [Nothoalsomitra suberosa] >YP_010015142.1 NADH dehydrogenase subunit J [Gynostemma yixingense] >YP_010131097.1 NADH-plastoquinone oxidoreductase subunit J [Benincasa hispida] >ALO21769.1 NdhJ [Cucurbita argyrosperma] >ALO21826.1 NdhJ [Cucurbita argyrosperma var. palmeri] >ALO21847.1 NdhJ [Cucurbita argyrosperma subsp. sororia] >ALO22065.1 NdhJ [Cucurbita ecuadorensis] >ALO22136.1 NdhJ [Cucurbita ficifolia] >ALO22158.1 NdhJ [Cucurbita foetidissima] >ALO22241.1 NdhJ [Cucurbita lundelliana] >ALO22331.1 NdhJ [Cucurbita maxima subsp. andreana] >ALO22449.1 NdhJ [Cucurbita okeechobeensis] >ALO22487.1 NdhJ [Cucurbita okeechobeensis subsp. martinezii] >ALO22587.1 NdhJ [Cucurbita pepo subsp. fraterna] >ALO22650.1 NdhJ [Cucurbita pepo subsp. ovifera] >ALO22728.1 NdhJ [Cucurbita pepo var. ozarkana] >ALO22760.1 NdhJ [Cucurbita pepo subsp. pepo] >ALO22812.1 NdhJ [Cucurbita pepo var. texana] >ALO22928.1 NdhJ [Cucurbita pedatifolia] >QNM38534.1 NADH-plastoquinone oxidoreductase subunit J [Lagenaria siceraria var. microcarpa] >QZL38596.1 NADH dehydrogenase subunit J [Citrullus naudinianus] >QZL38684.1 NADH dehydrogenase subunit J [Citrullus ecirrhosus])

HSP 1 Score: 347.1 bits (889), Expect = 8.3e-92
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60
           MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA
Sbjct: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60

Query: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120
           PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI
Sbjct: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120

Query: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 159
           SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
Sbjct: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 158

[Close]

BLAST of HG10017378 vs. NCBI nr
Match: ALO21898.1 (NdhJ [Cucurbita cordata] >ALO21971.1 NdhJ [Cucurbita digitata])

HSP 1 Score: 346.3 bits (887), Expect = 1.4e-91
Identity = 157/158 (99.37%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60
           MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA
Sbjct: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60

Query: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120
           PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI
Sbjct: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120

Query: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 159
           SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYE+QDAH
Sbjct: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYELQDAH 158

[Close]

BLAST of HG10017378 vs. NCBI nr
Match: YP_009751741.1 (NADH dehydrogenase subunit J [Herpetospermum pedunculosum] >QIT04474.1 NADH dehydrogenase subunit J [Herpetospermum pedunculosum] >QJR52959.1 NADH-plastoquinone oxidoreductase subunit J [Herpetospermum pedunculosum])

HSP 1 Score: 345.9 bits (886), Expect = 1.8e-91
Identity = 157/158 (99.37%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60
           MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKP+EWHSIAVILYVYGYNYLRSQCAYDVA
Sbjct: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPQEWHSIAVILYVYGYNYLRSQCAYDVA 60

Query: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120
           PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI
Sbjct: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120

Query: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 159
           SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
Sbjct: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 158

[Close]

BLAST of HG10017378 vs. NCBI nr
Match: AHM88883.1 (NADH-plastoquinone oxidoreductase subunit J [Lagenaria siceraria] >QIT04053.1 NADH dehydrogenase subunit J [Luffa aegyptiaca] >QKX48476.1 NADH-plastoquinone oxidoreductase subunit J [Luffa acutangula] >AHM88941.1 NADH-plastoquinone oxidoreductase subunit J [Lagenaria siceraria] >AHM88999.1 NADH-plastoquinone oxidoreductase subunit J [Lagenaria siceraria])

HSP 1 Score: 345.5 bits (885), Expect = 2.4e-91
Identity = 157/158 (99.37%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60
           MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA
Sbjct: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60

Query: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120
           PGGLLASVYHLTRIEYGIDQPEEVCIKVFA RINPRIPSVFWVWKSADFPERESYDMLGI
Sbjct: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFATRINPRIPSVFWVWKSADFPERESYDMLGI 120

Query: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 159
           SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
Sbjct: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 158

[Close]

BLAST of HG10017378 vs. NCBI nr
Match: YP_009325992.1 (NADH dehydrogenase subunit J [Citrullus lanatus] >YP_009348034.1 NADH dehydrogenase subunit J [Citrullus mucosospermus] >YP_009431560.1 NADH dehydrogenase subunit J [Citrullus amarus] >APW82464.1 NADH dehydrogenase subunit J [Citrullus lanatus subsp. vulgaris] >APD52483.1 NADH dehydrogenase subunit J [Citrullus lanatus] >APW82549.1 NADH dehydrogenase subunit J [Citrullus lanatus subsp. vulgaris] >APW82634.1 NADH dehydrogenase subunit J [Citrullus lanatus subsp. vulgaris] >APW82719.1 NADH dehydrogenase subunit J [Citrullus mucosospermus])

HSP 1 Score: 345.5 bits (885), Expect = 2.4e-91
Identity = 157/158 (99.37%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60
           MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA
Sbjct: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60

Query: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120
           PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERES+DMLGI
Sbjct: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESFDMLGI 120

Query: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 159
           SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
Sbjct: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 158

[Close]

BLAST of HG10017378 vs. ExPASy Swiss-Prot
Match: Q4VZH2 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhJ PE=3 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 3.5e-93
Identity = 156/158 (98.73%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60
           MQG+LSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA
Sbjct: 1   MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60

Query: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120
           PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI
Sbjct: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120

Query: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 159
            YDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
Sbjct: 121 YYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 158

[Close]

BLAST of HG10017378 vs. ExPASy Swiss-Prot
Match: B1A938 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Carica papaya OX=3649 GN=ndhJ PE=3 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 3.3e-91
Identity = 151/158 (95.57%), Postives = 154/158 (97.47%), Query Frame = 0


Query: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60
           MQGHLS WLVKHGLVHRSLGFDYQGIETLQIKPE+WHSIAVILYVYGYNYLRSQCAYDVA
Sbjct: 1   MQGHLSVWLVKHGLVHRSLGFDYQGIETLQIKPEDWHSIAVILYVYGYNYLRSQCAYDVA 60

Query: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120
           PGGLLASVYHLTRIEYG+DQPEEVCIKVFA R NPRIPSVFWVWKSADF ERESYDMLGI
Sbjct: 61  PGGLLASVYHLTRIEYGVDQPEEVCIKVFAPRSNPRIPSVFWVWKSADFQERESYDMLGI 120

Query: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 159
           SYDNHPRLKRILMPESW+GWPLRKDYIAPNFYEIQDAH
Sbjct: 121 SYDNHPRLKRILMPESWIGWPLRKDYIAPNFYEIQDAH 158

[Close]

BLAST of HG10017378 vs. ExPASy Swiss-Prot
Match: Q0ZJ17 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Vitis vinifera OX=29760 GN=ndhJ PE=3 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 9.5e-91
Identity = 150/158 (94.94%), Postives = 155/158 (98.10%), Query Frame = 0


Query: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60
           MQG LS+WLVKHGLVHRSLGFDYQGIETLQIKPE+WHSIAVILYVYGYNYLRSQCAYDVA
Sbjct: 1   MQGRLSAWLVKHGLVHRSLGFDYQGIETLQIKPEDWHSIAVILYVYGYNYLRSQCAYDVA 60

Query: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120
           PGGLLASVYHLTRIEYG+DQPEEVCIKVFA+R NPRIPSVFWVWKSADF ERESYDMLGI
Sbjct: 61  PGGLLASVYHLTRIEYGVDQPEEVCIKVFASRRNPRIPSVFWVWKSADFQERESYDMLGI 120

Query: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 159
           SYDNHPRLKRILMPESW+GWPLRKDYIAPNFYEIQDAH
Sbjct: 121 SYDNHPRLKRILMPESWIGWPLRKDYIAPNFYEIQDAH 158

[Close]

BLAST of HG10017378 vs. ExPASy Swiss-Prot
Match: P31174 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Glycine max OX=3847 GN=ndhJ PE=2 SV=2)

HSP 1 Score: 330.9 bits (847), Expect = 8.0e-90
Identity = 146/158 (92.41%), Postives = 154/158 (97.47%), Query Frame = 0


Query: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60
           MQG LSSWLVKHGL+HRSLGFDYQGIETLQIKPE+WHSIAVILYVYGYNYLRSQCAYDVA
Sbjct: 1   MQGRLSSWLVKHGLIHRSLGFDYQGIETLQIKPEDWHSIAVILYVYGYNYLRSQCAYDVA 60

Query: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120
           PGGLLASVYHLTR+EYGIDQPEEVCIK+F AR NPRIPS+FWVWKSADF E+ESYDMLGI
Sbjct: 61  PGGLLASVYHLTRLEYGIDQPEEVCIKIFVARKNPRIPSIFWVWKSADFQEKESYDMLGI 120

Query: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 159
           SYDNHPRL+RILMPESW+GWPLRKDYIAPNFYEIQDAH
Sbjct: 121 SYDNHPRLRRILMPESWIGWPLRKDYIAPNFYEIQDAH 158

[Close]

BLAST of HG10017378 vs. ExPASy Swiss-Prot
Match: B5LML3 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Cicer arietinum OX=3827 GN=ndhJ PE=3 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 1.8e-89
Identity = 147/158 (93.04%), Postives = 154/158 (97.47%), Query Frame = 0


Query: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60
           MQG+LS+WLVKHG+VHRSLGFDYQGIETLQIKPE+WHSIAVILYVYGYNYLRSQCAYDVA
Sbjct: 1   MQGNLSAWLVKHGIVHRSLGFDYQGIETLQIKPEDWHSIAVILYVYGYNYLRSQCAYDVA 60

Query: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120
           PGGLLASVYHLTRIEY +DQPEEVCIKVFA R NPRIPS+FWVWKSADF ERESYDMLGI
Sbjct: 61  PGGLLASVYHLTRIEYSLDQPEEVCIKVFAPRKNPRIPSIFWVWKSADFQERESYDMLGI 120

Query: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 159
           SYDNHPRLKRILMPESW+GWPLRKDYIAPNFYEIQDAH
Sbjct: 121 SYDNHPRLKRILMPESWIGWPLRKDYIAPNFYEIQDAH 158

[Close]

BLAST of HG10017378 vs. ExPASy TrEMBL
Match: A0A109WWM6 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Gynostemma pentaphyllum OX=182084 GN=ndhJ PE=3 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 4.0e-92
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60
           MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA
Sbjct: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60

Query: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120
           PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI
Sbjct: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120

Query: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 159
           SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
Sbjct: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 158

[Close]

BLAST of HG10017378 vs. ExPASy TrEMBL
Match: A0A6H0EQB7 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Indofevillea khasiana OX=383665 GN=ndhJ PE=3 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 4.0e-92
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60
           MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA
Sbjct: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60

Query: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120
           PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI
Sbjct: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120

Query: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 159
           SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
Sbjct: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 158

[Close]

BLAST of HG10017378 vs. ExPASy TrEMBL
Match: A0A2Z2CGF1 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Coccinia grandis OX=387127 GN=ndhJ PE=3 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 4.0e-92
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60
           MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA
Sbjct: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60

Query: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120
           PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI
Sbjct: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120

Query: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 159
           SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
Sbjct: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 158

[Close]

BLAST of HG10017378 vs. ExPASy TrEMBL
Match: X2F417 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Lagenaria siceraria OX=3668 GN=ndhJ PE=3 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 4.0e-92
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60
           MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA
Sbjct: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60

Query: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120
           PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI
Sbjct: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120

Query: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 159
           SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
Sbjct: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 158

[Close]

BLAST of HG10017378 vs. ExPASy TrEMBL
Match: A0A0S2IF70 (NADH-quinone oxidoreductase subunit C OS=Cucurbita moschata OX=3662 GN=ndhJ PE=3 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 4.0e-92
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60
           MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA
Sbjct: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60

Query: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120
           PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI
Sbjct: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120

Query: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 159
           SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
Sbjct: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 158

[Close]

BLAST of HG10017378 vs. TAIR 10
Match: ATCG00420.1 (NADH dehydrogenase subunit J )

HSP 1 Score: 313.2 bits (801), Expect = 1.2e-85
Identity = 141/158 (89.24%), Postives = 148/158 (93.67%), Query Frame = 0


Query: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60
           MQG LS WL K GLVHRSLGFDYQGIETLQIKPE+WHSIAVILYVYGYNYLRSQCAYDVA
Sbjct: 1   MQGTLSVWLAKRGLVHRSLGFDYQGIETLQIKPEDWHSIAVILYVYGYNYLRSQCAYDVA 60

Query: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120
           PGGLLASVYHLTRIEYG++Q EEVCIKVF  R NPRIPSVFWVWKS DF ERESYDMLGI
Sbjct: 61  PGGLLASVYHLTRIEYGVNQAEEVCIKVFTHRSNPRIPSVFWVWKSTDFQERESYDMLGI 120

Query: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 159
           +YD+HPRLKRILMPESW+GWPLRKDYIAPNFYEIQDA+
Sbjct: 121 TYDSHPRLKRILMPESWIGWPLRKDYIAPNFYEIQDAY 158

[Close]

BLAST of HG10017378 vs. TAIR 10
Match: ATMG00070.1 (NADH dehydrogenase subunit 9 )

HSP 1 Score: 50.8 bits (120), Expect = 1.1e-06
Identity = 31/96 (32.29%), Postives = 45/96 (46.88%), Query Frame = 0


Query: 77  GIDQPE-----EVCIKVFAARIN------------PRIPSVFWVWKSADFPERESYDMLG 136
           G+D P      EV   + + R N             RI  V  ++ SA   ERE +DM G
Sbjct: 61  GVDHPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRISPVVSLFPSAGRWEREVWDMFG 120

Query: 137 ISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQ 156
           +S+ NHP L+RI     + G PLRKD     + +++
Sbjct: 121 VSFINHPDLRRISTDYGFEGHPLRKDLPLSGYVQVR 156

The following BLAST results are available for this feature:

BLAST of HG10017378 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009236283.1	8.3e-92	100.00	NADH-plastoquinone oxidoreductase subunit J [Gynostemma pentaphyllum] >YP_009317...	[more]
ALO21898.1	1.4e-91	99.37	NdhJ [Cucurbita cordata] >ALO21971.1 NdhJ [Cucurbita digitata]	[more]
YP_009751741.1	1.8e-91	99.37	NADH dehydrogenase subunit J [Herpetospermum pedunculosum] >QIT04474.1 NADH dehy...	[more]
AHM88883.1	2.4e-91	99.37	NADH-plastoquinone oxidoreductase subunit J [Lagenaria siceraria] >QIT04053.1 NA...	[more]
YP_009325992.1	2.4e-91	99.37	NADH dehydrogenase subunit J [Citrullus lanatus] >YP_009348034.1 NADH dehydrogen...	[more]

BLAST of HG10017378 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4VZH2	3.5e-93	98.73	NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Cucumis sativus OX=36...	[more]
B1A938	3.3e-91	95.57	NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Carica papaya OX=3649...	[more]
Q0ZJ17	9.5e-91	94.94	NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Vitis vinifera OX=297...	[more]
P31174	8.0e-90	92.41	NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Glycine max OX=3847 G...	[more]
B5LML3	1.8e-89	93.04	NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Cicer arietinum OX=38...	[more]

BLAST of HG10017378 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A109WWM6	4.0e-92	100.00	NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Gynostemma pentaphyll...	[more]
A0A6H0EQB7	4.0e-92	100.00	NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Indofevillea khasiana...	[more]
A0A2Z2CGF1	4.0e-92	100.00	NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Coccinia grandis OX=3...	[more]
X2F417	4.0e-92	100.00	NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Lagenaria siceraria O...	[more]
A0A0S2IF70	4.0e-92	100.00	NADH-quinone oxidoreductase subunit C OS=Cucurbita moschata OX=3662 GN=ndhJ PE=3...	[more]

BLAST of HG10017378 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00420.1	1.2e-85	89.24	NADH dehydrogenase subunit J	[more]
ATMG00070.1	1.1e-06	32.29	NADH dehydrogenase subunit 9	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001268	NADH:ubiquinone oxidoreductase, 30kDa subunit	PFAM	PF00329	Complex1_30kDa	coord: 30..148 e-value: 5.1E-32 score: 111.0
IPR037232	NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily	GENE3D	3.30.460.80	NADH:ubiquinone oxidoreductase, 30kDa subunit	coord: 15..130 e-value: 4.0E-24 score: 87.6
IPR037232	NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily	SUPERFAMILY	143243	Nqo5-like	coord: 5..154
None	No IPR available	PANTHER	PTHR10884:SF18	NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT J, CHLOROPLASTIC	coord: 53..158
None	No IPR available	PANTHER	PTHR10884	NADH DEHYDROGENASE UBIQUINONE IRON-SULFUR PROTEIN 3	coord: 53..158
IPR020396	NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site	PROSITE	PS00542	COMPLEX1_30K	coord: 111..132
IPR010218	NADH dehydrogenase, subunit C	HAMAP	MF_01357	NDH1_NuoC	coord: 1..158 score: 25.465641

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10017378.1	HG10017378.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
biological_process	GO:0019684	photosynthesis, light reaction
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity
molecular_function	GO:0048038	quinone binding
molecular_function	GO:0016651	oxidoreductase activity, acting on NAD(P)H