HG10016011 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10016011
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description50S ribosomal protein L34, chloroplastic
LocationChr03: 2148200 .. 2151297 (-)
RNA-Seq ExpressionHG10016011
SyntenyHG10016011
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGTCGAGCAAGGTGGAAAATCTGCACCTGTCGGTAGCCCAGTTCCGCCCATGAAGCTCTTATTCGTCGAGATGGGAGTTGGCTACGATCAACATGGGTGAATTTTCAGCTCTTTTTTCTTTTTCCACAAATTTTAATTTGGGGAATGCAATTACAATACAAACTCGTTTTCAGTGCGAAAACAACGAGATTAACGAGTGGATTTTTCTTTTGCCACAGCCAAGATATCACGGCGGCTGCAATGCGAGCCTGCAGGGATGCCATCTCTTCCAATTCGATTCCAGCATTCCGTAGAGGTATCTCCCAGTGGGTTTCATATTCTCCCGCTATTTGTTATCTACTTAATTAATCACGTTTGACAGGAGATTTGAGTTTCTGAAATTAGCTCCTCGCTCTTGCGCCTTTCTGGATTTCTTTTCGAATTCAGAATCTCAATTTTATGGTTACTTCTGGCTTTTGCAAATTGCGTTTATGTTGAAAGATGTATCTGCTTTCGTTATGTTAATATTATAACTAGGACTAATGACAAAGTGTTTTGTAGGTTCCATTCCTGGAGTCACATTTGGAGAGATGAAACTACAGATCAAACTTGGAGTTCCACAGTCTCTTCAACAATCCTTGGATATTGAAAAAGTCAAGTCCGTCTTCCCATAGTGAGTGCTGAACTATTTTAAGTTGGGTAACTAATACTTTTGGGGTGAACGCAGAGCAGTCTTTCTTGTTAACAGCTACACCTTGAGTATTTGATCAGGCTTATTAGTGTTATTGATACAAACGCATGAATGAGCCTTAATAATCTTAACAACAGGAGGAATAAGTTAAACTACTAACTCAGCCATCTTAACAAAATAACCGAACAGAGGGAGAGGGGATGGAAAAGTAACAAGGTACAAAAGCAAGTGATGTAAGTCAACCGCAATGGATGCTGTACAGATTTGTCGAAGCTGCTGAGCTGTAGAAGAAGGCTGATCAGATTAAGATGCCGTGTTGTTTAGTGGCTTACTTTCACATCCCCCCTGAACATGTGGGTGTTTCGATCACTCCAAGCTTCTCTAAAGAAAGTAAATTAAGCGCCCAATTTTAGTTTTTCTTGATTCAAGGTGAAGATTGCTTAAGATGTTGGTCCTTGCATGGTAAATCAGATTCGTACTGCTGCTAATCACATCAACCAAAGTTTTATACCCTGATTATGCGCTTGATCTGAATACAAAGTTTTGTTTCGTGGGCTTCTATGAAATTAGATTTTCACTGAGAAAGACAGCTTGGTATGAGTGTAACAAGGCTTTATATGGAGACTGATTTTGTGTTCCTCTTTAAGTATTCAAGGATTTTTCTTGCCCCTTGCCAAGGATGAGTGATTAGGCTTTGCGAATATGGGCTGGGTCTCATCCATGATATGTCCAACCGAGACCCTATCGCACTGAAAGTCATGGGATCACTTTTCAATCCATTTTTGCAATTTCTGATTCCTTGCTTATCAGAACTTGAGAGGGACAAGCTTTCACCTCATTCTAGGTTAAGTTGAGATGTGTCTCTTCTTACTTCCACTACCAAAAAGCAATTTAATTCATCAGCATCTTTCGAGGCAAAAAGTTAGAACAAAATCTGTAAGGAACCCTTTATCCTCATTTTTGCTAGTTCATGTCATTAATATGTCATCAACATAATTAAGAATATAGAACAAAGGATTGTATCTCTGAACACAAGTAGGAAGAGCTTGACTTGGAGTTGATGAAGGCCCGACTAGGAAGAATTGTTCTCAACTTCTTGAGCTAGTCTCATGGAGCTTGTTTTAGGCTTTGCAAGGCCTTGTTGGTTTGCATACATCTGTAAATCTTTCCAGGTCGGTATATCCGTCTGATTGATCTCTCCATTCAAAGATGCACTATTTATGTCCAATTAATTTGATTACCCGCCTTTTACTAAGTTAAAGATTTAGCCACAACCACAAGTATGTACGAATTTGAATTTTGATCCAAATTTCAACTGGATGGGTGAGCTAGCCTCTGATGCTGCAAGATACATGTTCCATCATTGGATTGATTGATTTATTTATTATCACTATTTTTTTCTGGAATGATAGACATTAGACTCAACATCAGACTTCAACACTTCGACTCAACTGACTTGATCACTTGAATCTCTTGGAGGAGACTGACAGTAAAGGGATCGAGGATCTGAGTATTCTCTATTGGTGGGCTAAGATGATATCAATAATCCTTAAATCTCCAAACAGGACATTTCATGTCAAAATAGAGAGCTTACTAGGGTTTTATTTTTTATTTTTTAAATCTAGGGCCCTAGGCACTCATATGACATTTCTCAGTTTTAAAGGACTAGATGGTTGCTAGGAATTTAGGTTATGTATTTATTTTTATATTTTAATCTCTGGCAAGTAAAATCTGTCTCTTGCATTGATCTGTACTATGGTAGGAGTGTGTTCGGCCTCTAAGCCAGCTGTAGACTGTAACAGAGATGATTCAGTCTCAGGTTGAGATCCCTTTTCCAATTATGGCATGATTGTCTGAGAGCTGCTTCATCTTGCCCTGATAATCTATCGTGCTTAATGCTTCTTTCTTTGTCATCTAGATTTCATGTCTCAAGTTACTTACCCTGGCTTTATTTTAACCACCACCACCACCACCACAACCACAATATCCCAAGTGGTTTCCATGTTCTTCTGGGCTACTTGTACTGCAACCTCCAGAGTGAGTGGACCGTAGTTGATCGTTAGTTTAGTAACCCACTTCGTCAATTTTTCTTCAAAGTTTATTTTTCTGTGCGGATATTTTATTATCAAATCATAATTAACTAACCTATTGCTCGCTTTCTTGTTGGCCTTCCATTTTGATTTAGTACGCTTGAAACCAGATAAATTTTTCCACCGATGATAGTGAAAGTGAACACCTCTAAACTATCCTCTTCAAAATATATTGAATCTTTCCATCATTTGATTTACTGCAGTGGAAAGATTCTTAATGTTGAGGTCGTCGATGGTGGCTTAATATGCTCCAGCGGTGTGCATGTGGAAGAAATGGGAGACAAAAATGATGACTGTTACATAGTAAATGCTGCTGTATACGTTGGCTACTAA

mRNA sequence

ATGGAGGTCGAGCAAGGTGGAAAATCTGCACCTGTCGGTAGCCCAGTTCCGCCCATGAAGCTCTTATTCGTCGAGATGGGAGTTGGCTACGATCAACATGGCCAAGATATCACGGCGGCTGCAATGCGAGCCTGCAGGGATGCCATCTCTTCCAATTCGATTCCAGCATTCCGTAGAGGTTCCATTCCTGGAGTCACATTTGGAGAGATGAAACTACAGATCAAACTTGGAGTTCCACAGTCTCTTCAACAATCCTTGGATATTGAAAAAGTCAAGTCCGTCTTCCCATATGGAAAGATTCTTAATGTTGAGGTCGTCGATGGTGGCTTAATATGCTCCAGCGGTGTGCATGTGGAAGAAATGGGAGACAAAAATGATGACTGTTACATAGTAAATGCTGCTGTATACGTTGGCTACTAA

Coding sequence (CDS)

ATGGAGGTCGAGCAAGGTGGAAAATCTGCACCTGTCGGTAGCCCAGTTCCGCCCATGAAGCTCTTATTCGTCGAGATGGGAGTTGGCTACGATCAACATGGCCAAGATATCACGGCGGCTGCAATGCGAGCCTGCAGGGATGCCATCTCTTCCAATTCGATTCCAGCATTCCGTAGAGGTTCCATTCCTGGAGTCACATTTGGAGAGATGAAACTACAGATCAAACTTGGAGTTCCACAGTCTCTTCAACAATCCTTGGATATTGAAAAAGTCAAGTCCGTCTTCCCATATGGAAAGATTCTTAATGTTGAGGTCGTCGATGGTGGCTTAATATGCTCCAGCGGTGTGCATGTGGAAGAAATGGGAGACAAAAATGATGACTGTTACATAGTAAATGCTGCTGTATACGTTGGCTACTAA

Protein sequence

MEVEQGGKSAPVGSPVPPMKLLFVEMGVGYDQHGQDITAAAMRACRDAISSNSIPAFRRGSIPGVTFGEMKLQIKLGVPQSLQQSLDIEKVKSVFPYGKILNVEVVDGGLICSSGVHVEEMGDKNDDCYIVNAAVYVGY
Homology
[Close]
BLAST of HG10016011 vs. NCBI nr
Match: XP_038883708.1 (uncharacterized protein LOC120074614 isoform X1 [Benincasa hispida])

HSP 1 Score: 275.0 bits (702), Expect = 3.5e-70
Identity = 136/139 (97.84%), Postives = 136/139 (97.84%), Query Frame = 0 

Query: 1   MEVEQGGKSAPVGSPVPPMKLLFVEMGVGYDQHGQDITAAAMRACRDAISSNSIPAFRRG 60
           MEVEQGGKSAP GS VPPMKLLFVEMGVGYDQHGQDITAAAMRACRDAISSNSIPAFRRG
Sbjct: 57  MEVEQGGKSAPAGSTVPPMKLLFVEMGVGYDQHGQDITAAAMRACRDAISSNSIPAFRRG 116

Query: 61  SIPGVTFGEMKLQIKLGVPQSLQQSLDIEKVKSVFPYGKILNVEVVDGGLICSSGVHVEE 120
           SIPGVTFGEMKLQIKLGVP SLQQSLDIEKVKSVFPYGKILNVEVVDGGLICSSGVHVEE
Sbjct: 117 SIPGVTFGEMKLQIKLGVPVSLQQSLDIEKVKSVFPYGKILNVEVVDGGLICSSGVHVEE 176

Query: 121 MGDKNDDCYIVNAAVYVGY 140
           MGDKNDDCYIVNAAVYVGY
Sbjct: 177 MGDKNDDCYIVNAAVYVGY 195

[Close]
BLAST of HG10016011 vs. NCBI nr
Match: XP_038883710.1 (uncharacterized protein LOC120074614 isoform X3 [Benincasa hispida])

HSP 1 Score: 275.0 bits (702), Expect = 3.5e-70
Identity = 136/139 (97.84%), Postives = 136/139 (97.84%), Query Frame = 0 

Query: 1   MEVEQGGKSAPVGSPVPPMKLLFVEMGVGYDQHGQDITAAAMRACRDAISSNSIPAFRRG 60
           MEVEQGGKSAP GS VPPMKLLFVEMGVGYDQHGQDITAAAMRACRDAISSNSIPAFRRG
Sbjct: 1   MEVEQGGKSAPAGSTVPPMKLLFVEMGVGYDQHGQDITAAAMRACRDAISSNSIPAFRRG 60

Query: 61  SIPGVTFGEMKLQIKLGVPQSLQQSLDIEKVKSVFPYGKILNVEVVDGGLICSSGVHVEE 120
           SIPGVTFGEMKLQIKLGVP SLQQSLDIEKVKSVFPYGKILNVEVVDGGLICSSGVHVEE
Sbjct: 61  SIPGVTFGEMKLQIKLGVPVSLQQSLDIEKVKSVFPYGKILNVEVVDGGLICSSGVHVEE 120

Query: 121 MGDKNDDCYIVNAAVYVGY 140
           MGDKNDDCYIVNAAVYVGY
Sbjct: 121 MGDKNDDCYIVNAAVYVGY 139

[Close]
BLAST of HG10016011 vs. NCBI nr
Match: XP_038883709.1 (uncharacterized protein LOC120074614 isoform X2 [Benincasa hispida])

HSP 1 Score: 275.0 bits (702), Expect = 3.5e-70
Identity = 136/139 (97.84%), Postives = 136/139 (97.84%), Query Frame = 0 

Query: 1   MEVEQGGKSAPVGSPVPPMKLLFVEMGVGYDQHGQDITAAAMRACRDAISSNSIPAFRRG 60
           MEVEQGGKSAP GS VPPMKLLFVEMGVGYDQHGQDITAAAMRACRDAISSNSIPAFRRG
Sbjct: 11  MEVEQGGKSAPAGSTVPPMKLLFVEMGVGYDQHGQDITAAAMRACRDAISSNSIPAFRRG 70

Query: 61  SIPGVTFGEMKLQIKLGVPQSLQQSLDIEKVKSVFPYGKILNVEVVDGGLICSSGVHVEE 120
           SIPGVTFGEMKLQIKLGVP SLQQSLDIEKVKSVFPYGKILNVEVVDGGLICSSGVHVEE
Sbjct: 71  SIPGVTFGEMKLQIKLGVPVSLQQSLDIEKVKSVFPYGKILNVEVVDGGLICSSGVHVEE 130

Query: 121 MGDKNDDCYIVNAAVYVGY 140
           MGDKNDDCYIVNAAVYVGY
Sbjct: 131 MGDKNDDCYIVNAAVYVGY 149

[Close]
BLAST of HG10016011 vs. NCBI nr
Match: XP_008439752.1 (PREDICTED: uncharacterized protein LOC103484457 isoform X1 [Cucumis melo])

HSP 1 Score: 271.6 bits (693), Expect = 3.9e-69
Identity = 134/139 (96.40%), Postives = 136/139 (97.84%), Query Frame = 0 

Query: 1   MEVEQGGKSAPVGSPVPPMKLLFVEMGVGYDQHGQDITAAAMRACRDAISSNSIPAFRRG 60
           MEVEQGG+SAPV S VPPMKLLFVEMGVGYDQHGQDITAAAMRACRDAISSNSIPAFRRG
Sbjct: 55  MEVEQGGESAPVDSTVPPMKLLFVEMGVGYDQHGQDITAAAMRACRDAISSNSIPAFRRG 114

Query: 61  SIPGVTFGEMKLQIKLGVPQSLQQSLDIEKVKSVFPYGKILNVEVVDGGLICSSGVHVEE 120
           SIPGV+FGEMKLQIKLGVP SLQQSLDIEKVKSVFPYGKILNVEVVDGGLICSSGVHVEE
Sbjct: 115 SIPGVSFGEMKLQIKLGVPHSLQQSLDIEKVKSVFPYGKILNVEVVDGGLICSSGVHVEE 174

Query: 121 MGDKNDDCYIVNAAVYVGY 140
           MGDKNDDCYIVNAAVYVGY
Sbjct: 175 MGDKNDDCYIVNAAVYVGY 193

[Close]
BLAST of HG10016011 vs. NCBI nr
Match: XP_008439755.1 (PREDICTED: uncharacterized protein LOC103484457 isoform X3 [Cucumis melo])

HSP 1 Score: 271.6 bits (693), Expect = 3.9e-69
Identity = 134/139 (96.40%), Postives = 136/139 (97.84%), Query Frame = 0 

Query: 1   MEVEQGGKSAPVGSPVPPMKLLFVEMGVGYDQHGQDITAAAMRACRDAISSNSIPAFRRG 60
           MEVEQGG+SAPV S VPPMKLLFVEMGVGYDQHGQDITAAAMRACRDAISSNSIPAFRRG
Sbjct: 1   MEVEQGGESAPVDSTVPPMKLLFVEMGVGYDQHGQDITAAAMRACRDAISSNSIPAFRRG 60

Query: 61  SIPGVTFGEMKLQIKLGVPQSLQQSLDIEKVKSVFPYGKILNVEVVDGGLICSSGVHVEE 120
           SIPGV+FGEMKLQIKLGVP SLQQSLDIEKVKSVFPYGKILNVEVVDGGLICSSGVHVEE
Sbjct: 61  SIPGVSFGEMKLQIKLGVPHSLQQSLDIEKVKSVFPYGKILNVEVVDGGLICSSGVHVEE 120

Query: 121 MGDKNDDCYIVNAAVYVGY 140
           MGDKNDDCYIVNAAVYVGY
Sbjct: 121 MGDKNDDCYIVNAAVYVGY 139

[Close]
BLAST of HG10016011 vs. ExPASy TrEMBL
Match: A0A1S3AZI5 (uncharacterized protein LOC103484457 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103484457 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 1.9e-69
Identity = 134/139 (96.40%), Postives = 136/139 (97.84%), Query Frame = 0 

Query: 1   MEVEQGGKSAPVGSPVPPMKLLFVEMGVGYDQHGQDITAAAMRACRDAISSNSIPAFRRG 60
           MEVEQGG+SAPV S VPPMKLLFVEMGVGYDQHGQDITAAAMRACRDAISSNSIPAFRRG
Sbjct: 1   MEVEQGGESAPVDSTVPPMKLLFVEMGVGYDQHGQDITAAAMRACRDAISSNSIPAFRRG 60

Query: 61  SIPGVTFGEMKLQIKLGVPQSLQQSLDIEKVKSVFPYGKILNVEVVDGGLICSSGVHVEE 120
           SIPGV+FGEMKLQIKLGVP SLQQSLDIEKVKSVFPYGKILNVEVVDGGLICSSGVHVEE
Sbjct: 61  SIPGVSFGEMKLQIKLGVPHSLQQSLDIEKVKSVFPYGKILNVEVVDGGLICSSGVHVEE 120

Query: 121 MGDKNDDCYIVNAAVYVGY 140
           MGDKNDDCYIVNAAVYVGY
Sbjct: 121 MGDKNDDCYIVNAAVYVGY 139

[Close]
BLAST of HG10016011 vs. ExPASy TrEMBL
Match: A0A1S3B079 (uncharacterized protein LOC103484457 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484457 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 1.9e-69
Identity = 134/139 (96.40%), Postives = 136/139 (97.84%), Query Frame = 0 

Query: 1   MEVEQGGKSAPVGSPVPPMKLLFVEMGVGYDQHGQDITAAAMRACRDAISSNSIPAFRRG 60
           MEVEQGG+SAPV S VPPMKLLFVEMGVGYDQHGQDITAAAMRACRDAISSNSIPAFRRG
Sbjct: 55  MEVEQGGESAPVDSTVPPMKLLFVEMGVGYDQHGQDITAAAMRACRDAISSNSIPAFRRG 114

Query: 61  SIPGVTFGEMKLQIKLGVPQSLQQSLDIEKVKSVFPYGKILNVEVVDGGLICSSGVHVEE 120
           SIPGV+FGEMKLQIKLGVP SLQQSLDIEKVKSVFPYGKILNVEVVDGGLICSSGVHVEE
Sbjct: 115 SIPGVSFGEMKLQIKLGVPHSLQQSLDIEKVKSVFPYGKILNVEVVDGGLICSSGVHVEE 174

Query: 121 MGDKNDDCYIVNAAVYVGY 140
           MGDKNDDCYIVNAAVYVGY
Sbjct: 175 MGDKNDDCYIVNAAVYVGY 193

[Close]
BLAST of HG10016011 vs. ExPASy TrEMBL
Match: A0A6J1ED44 (uncharacterized protein LOC111433074 OS=Cucurbita moschata OX=3662 GN=LOC111433074 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.2e-69
Identity = 135/139 (97.12%), Postives = 136/139 (97.84%), Query Frame = 0 

Query: 1   MEVEQGGKSAPVGSPVPPMKLLFVEMGVGYDQHGQDITAAAMRACRDAISSNSIPAFRRG 60
           MEVEQGGKSAPVGS  PPMKLLFVEMGVGYDQHGQDITAAAMRACRDAISSNSIPAFRRG
Sbjct: 56  MEVEQGGKSAPVGS-TPPMKLLFVEMGVGYDQHGQDITAAAMRACRDAISSNSIPAFRRG 115

Query: 61  SIPGVTFGEMKLQIKLGVPQSLQQSLDIEKVKSVFPYGKILNVEVVDGGLICSSGVHVEE 120
           SIPGVTFGEMKLQIKLGVP SLQQSLDIEKVKSVFPYGKI+NVEVVDGGLICSSGVHVEE
Sbjct: 116 SIPGVTFGEMKLQIKLGVPHSLQQSLDIEKVKSVFPYGKIMNVEVVDGGLICSSGVHVEE 175

Query: 121 MGDKNDDCYIVNAAVYVGY 140
           MGDKNDDCYIVNAAVYVGY
Sbjct: 176 MGDKNDDCYIVNAAVYVGY 193

[Close]
BLAST of HG10016011 vs. ExPASy TrEMBL
Match: A0A0A0KNJ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519490 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 4.2e-69
Identity = 132/139 (94.96%), Postives = 136/139 (97.84%), Query Frame = 0 

Query: 1   MEVEQGGKSAPVGSPVPPMKLLFVEMGVGYDQHGQDITAAAMRACRDAISSNSIPAFRRG 60
           MEVEQGG+SAPV S VPPMKLLFVEMGVGYDQHGQD+TAAAMRACRDAISSNSIPAFRRG
Sbjct: 55  MEVEQGGESAPVDSTVPPMKLLFVEMGVGYDQHGQDVTAAAMRACRDAISSNSIPAFRRG 114

Query: 61  SIPGVTFGEMKLQIKLGVPQSLQQSLDIEKVKSVFPYGKILNVEVVDGGLICSSGVHVEE 120
           SIPGV+FGEMKLQIKLGVP SLQQSLD+EKVKSVFPYGKILNVEVVDGGLICSSGVHVEE
Sbjct: 115 SIPGVSFGEMKLQIKLGVPHSLQQSLDLEKVKSVFPYGKILNVEVVDGGLICSSGVHVEE 174

Query: 121 MGDKNDDCYIVNAAVYVGY 140
           MGDKNDDCYIVNAAVYVGY
Sbjct: 175 MGDKNDDCYIVNAAVYVGY 193

[Close]
BLAST of HG10016011 vs. ExPASy TrEMBL
Match: A0A6J1CKY1 (uncharacterized protein LOC111012382 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111012382 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 3.9e-67
Identity = 129/139 (92.81%), Postives = 134/139 (96.40%), Query Frame = 0 

Query: 1   MEVEQGGKSAPVGSPVPPMKLLFVEMGVGYDQHGQDITAAAMRACRDAISSNSIPAFRRG 60
           MEVE+GG+SA VGS   PMKLLFVEMGVGYDQHGQD+TAAAMRACRDAISSNSIPAFRRG
Sbjct: 17  MEVEEGGRSAAVGSTASPMKLLFVEMGVGYDQHGQDVTAAAMRACRDAISSNSIPAFRRG 76

Query: 61  SIPGVTFGEMKLQIKLGVPQSLQQSLDIEKVKSVFPYGKILNVEVVDGGLICSSGVHVEE 120
           SIPGVTF +MKLQIKLGVPQ+LQQSLDIEKVKSVFPYGKILNVEVVDGGLICSSGVHVEE
Sbjct: 77  SIPGVTFDQMKLQIKLGVPQTLQQSLDIEKVKSVFPYGKILNVEVVDGGLICSSGVHVEE 136

Query: 121 MGDKNDDCYIVNAAVYVGY 140
           MGDKNDDCYIVNAAVYVGY
Sbjct: 137 MGDKNDDCYIVNAAVYVGY 155

[Close]
BLAST of HG10016011 vs. TAIR 10
Match: AT1G29040.1 (unknown protein; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP02058 (InterPro:IPR011719); Has 344 Blast hits to 344 proteins in 122 species: Archae - 2; Bacteria - 227; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink). )

HSP 1 Score: 221.5 bits (563), Expect = 4.3e-58
Identity = 106/127 (83.46%), Postives = 117/127 (92.13%), Query Frame = 0 

Query: 13  GSPVPPMKLLFVEMGVGYDQHGQDITAAAMRACRDAISSNSIPAFRRGSIPGVTFGEMKL 72
           G P   MKLLFVEMGVGYDQHGQD+T+AAM+AC++AISSNSIPAFRRGSIPGV+FGEMKL
Sbjct: 72  GVPNNTMKLLFVEMGVGYDQHGQDVTSAAMKACKNAISSNSIPAFRRGSIPGVSFGEMKL 131

Query: 73  QIKLGVPQSLQQSLDIEKVKSVFPYGKILNVEVVDGGLICSSGVHVEEMGDKNDDCYIVN 132
           QIKLGVP SL Q LD++KVKS+FPYGKI+NVEVVDGGLICSSGV VEEMGD N+DCYIVN
Sbjct: 132 QIKLGVPHSLHQQLDLDKVKSIFPYGKIVNVEVVDGGLICSSGVLVEEMGDTNEDCYIVN 191

Query: 133 AAVYVGY 140
            AVYVGY
Sbjct: 192 VAVYVGY 198

[Close]
BLAST of HG10016011 vs. TAIR 10
Match: AT1G29040.4 (unknown protein; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP02058 (InterPro:IPR011719); Has 344 Blast hits to 344 proteins in 122 species: Archae - 2; Bacteria - 227; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink). )

HSP 1 Score: 221.5 bits (563), Expect = 4.3e-58
Identity = 106/127 (83.46%), Postives = 117/127 (92.13%), Query Frame = 0 

Query: 13  GSPVPPMKLLFVEMGVGYDQHGQDITAAAMRACRDAISSNSIPAFRRGSIPGVTFGEMKL 72
           G P   MKLLFVEMGVGYDQHGQD+T+AAM+AC++AISSNSIPAFRRGSIPGV+FGEMKL
Sbjct: 72  GVPNNTMKLLFVEMGVGYDQHGQDVTSAAMKACKNAISSNSIPAFRRGSIPGVSFGEMKL 131

Query: 73  QIKLGVPQSLQQSLDIEKVKSVFPYGKILNVEVVDGGLICSSGVHVEEMGDKNDDCYIVN 132
           QIKLGVP SL Q LD++KVKS+FPYGKI+NVEVVDGGLICSSGV VEEMGD N+DCYIVN
Sbjct: 132 QIKLGVPHSLHQQLDLDKVKSIFPYGKIVNVEVVDGGLICSSGVLVEEMGDTNEDCYIVN 191

Query: 133 AAVYVGY 140
            AVYVGY
Sbjct: 192 VAVYVGY 198

[Close]
BLAST of HG10016011 vs. TAIR 10
Match: AT1G29040.2 (unknown protein; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP02058 (InterPro:IPR011719); Has 190 Blast hits to 190 proteins in 92 species: Archae - 2; Bacteria - 141; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). )

HSP 1 Score: 186.0 bits (471), Expect = 2.0e-47
Identity = 93/127 (73.23%), Postives = 102/127 (80.31%), Query Frame = 0 

Query: 13  GSPVPPMKLLFVEMGVGYDQHGQDITAAAMRACRDAISSNSIPAFRRGSIPGVTFGEMKL 72
           G P   MKLLFVEMGVGYDQHGQD+T+AAM+AC               SIPGV+FGEMKL
Sbjct: 72  GVPNNTMKLLFVEMGVGYDQHGQDVTSAAMKAC---------------SIPGVSFGEMKL 131

Query: 73  QIKLGVPQSLQQSLDIEKVKSVFPYGKILNVEVVDGGLICSSGVHVEEMGDKNDDCYIVN 132
           QIKLGVP SL Q LD++KVKS+FPYGKI+NVEVVDGGLICSSGV VEEMGD N+DCYIVN
Sbjct: 132 QIKLGVPHSLHQQLDLDKVKSIFPYGKIVNVEVVDGGLICSSGVLVEEMGDTNEDCYIVN 183

Query: 133 AAVYVGY 140
            AVYVGY
Sbjct: 192 VAVYVGY 183

[Close]
BLAST of HG10016011 vs. TAIR 10
Match: AT1G29040.3 (unknown protein; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP02058 (InterPro:IPR011719); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 84.7 bits (208), Expect = 6.3e-17
Identity = 39/49 (79.59%), Postives = 45/49 (91.84%), Query Frame = 0 

Query: 13  GSPVPPMKLLFVEMGVGYDQHGQDITAAAMRACRDAISSNSIPAFRRGS 62
           G P   MKLLFVEMGVGYDQHGQD+T+AAM+AC++AISSNSIPAFRRG+
Sbjct: 72  GVPNNTMKLLFVEMGVGYDQHGQDVTSAAMKACKNAISSNSIPAFRRGT 120

The following BLAST results are available for this feature:
BLAST of HG10016011 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038883708.13.5e-7097.84uncharacterized protein LOC120074614 isoform X1 [Benincasa hispida][more]
XP_038883710.13.5e-7097.84uncharacterized protein LOC120074614 isoform X3 [Benincasa hispida][more]
XP_038883709.13.5e-7097.84uncharacterized protein LOC120074614 isoform X2 [Benincasa hispida][more]
XP_008439752.13.9e-6996.40PREDICTED: uncharacterized protein LOC103484457 isoform X1 [Cucumis melo][more]
XP_008439755.13.9e-6996.40PREDICTED: uncharacterized protein LOC103484457 isoform X3 [Cucumis melo][more]
BLAST of HG10016011 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of HG10016011 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3AZI51.9e-6996.40uncharacterized protein LOC103484457 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S3B0791.9e-6996.40uncharacterized protein LOC103484457 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A6J1ED443.2e-6997.12uncharacterized protein LOC111433074 OS=Cucurbita moschata OX=3662 GN=LOC1114330... [more]
A0A0A0KNJ44.2e-6994.96Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519490 PE=4 SV=1[more]
A0A6J1CKY13.9e-6792.81uncharacterized protein LOC111012382 isoform X2 OS=Momordica charantia OX=3673 G... [more]
BLAST of HG10016011 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G29040.14.3e-5883.46unknown protein; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: 22 plant struct... [more]
AT1G29040.44.3e-5883.46unknown protein; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP0... [more]
AT1G29040.22.0e-4773.23unknown protein; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: 22 plant struct... [more]
AT1G29040.36.3e-1779.59unknown protein; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: 22 plant struct... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037103Tubulin/FtsZ-like, C-terminal domainGENE3D3.30.1330.20coord: 17..139
e-value: 3.1E-44
score: 151.7
IPR011719Conserved hypothetical protein CHP02058TIGRFAMTIGR02058TIGR02058coord: 20..139
e-value: 2.9E-54
score: 180.0
IPR011719Conserved hypothetical protein CHP02058PFAMPF09585Lin0512_famcoord: 22..137
e-value: 2.0E-40
score: 137.3
IPR011719Conserved hypothetical protein CHP02058PANTHERPTHR3478450S RIBOSOMAL PROTEIN L34coord: 7..139

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10016011.1HG10016011.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005525 GTP binding